Carg14550 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg14550
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
LocationCarg_Chr18: 2659101 .. 2659289 (-)
RNA-Seq ExpressionCarg14550
SyntenyCarg14550
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTATGAATCGACGACAATGGATGACGACGAGCCACTTCTTGGGAAGATAAAAGCCAAAACCCAAAAGCGAAGCAGCTCCTCTTTCGAAAGAGACGTACGGAAGTTGTTTGCAGCGACGAATCGAGCAAGACAATCACCAACTTCACTGATGAAGATTAAGTTCCTGCTCGCTCAGTTTCTTTGA

mRNA sequence

ATGGATTATGAATCGACGACAATGGATGACGACGAGCCACTTCTTGGGAAGATAAAAGCCAAAACCCAAAAGCGAAGCAGCTCCTCTTTCGAAAGAGACGTACGGAAGTTGTTTGCAGCGACGAATCGAGCAAGACAATCACCAACTTCACTGATGAAGATTAAGTTCCTGCTCGCTCAGTTTCTTTGA

Coding sequence (CDS)

ATGGATTATGAATCGACGACAATGGATGACGACGAGCCACTTCTTGGGAAGATAAAAGCCAAAACCCAAAAGCGAAGCAGCTCCTCTTTCGAAAGAGACGTACGGAAGTTGTTTGCAGCGACGAATCGAGCAAGACAATCACCAACTTCACTGATGAAGATTAAGTTCCTGCTCGCTCAGTTTCTTTGA

Protein sequence

MDYESTTMDDDEPLLGKIKAKTQKRSSSSFERDVRKLFAATNRARQSPTSLMKIKFLLAQFL
Homology
[Close]
BLAST of Carg14550 vs. NCBI nr
Match: KAG7012510.1 (hypothetical protein SDJN02_25262, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 117.5 bits (293), Expect = 4.2e-23
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0 

Query: 1  MDYESTTMDDDEPLLGKIKAKTQKRSSSSFERDVRKLFAATNRARQSPTSLMKIKFLLAQ 60
          MDYESTTMDDDEPLLGKIKAKTQKRSSSSFERDVRKLFAATNRARQSPTSLMKIKFLLAQ
Sbjct: 1  MDYESTTMDDDEPLLGKIKAKTQKRSSSSFERDVRKLFAATNRARQSPTSLMKIKFLLAQ 60

Query: 61 FL 63
          FL
Sbjct: 61 FL 62

The following BLAST results are available for this feature:
BLAST of Carg14550 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7012510.14.2e-23100.00hypothetical protein SDJN02_25262, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of Carg14550 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg14550 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg14550 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg14550-RACarg14550-RAmRNA