Carg14549 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg14549
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	cold-regulated 413 inner membrane protein 1, chloroplastic-like
Location	Carg_Chr18: 2663721 .. 2665618 (+)
RNA-Seq Expression	Carg14549
Synteny	Carg14549

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAATGAAAAACTTTGGTAATATTTTTGCTATCCATTATAAATAGAATAAACTGAAATTAAGATTGACGTGTTCGAGTTGAACGACAATTGGCCCAATCACTCCACTTCGGTAAGGCGGCTCTGGATTCTTCGTGTTCATCAGTCAGGCAAGCGACGATTTGCTTGTTGAATCAAAACTAGAGAATCGAAAGCATCGTTTACAGTCCAAATCTGAGAGAAGATAGAAGCTGAACCAGGCAACGGAAGAAAGGGGAAATGGTTTGTGTATTATCTTCTGCTATTTCACTTCACAGTCCTGTTCTATACAAATCCAAGCTATCCGCTCCTCTCTCTCTAAGATCCTCTCTGCCGAATGCAAAGCTCACGTTTAATCCTGCCGCTAAACAGAGTTTGATATGTTCTAATCCGATCAGGTAATTTCAGGCTTCAAAATCATGTTAGTCCGTTTGAGTAGTGATTTTGGATTAAAAATTTGTTAGTATTGTTTAAAAATGAAAAGATGTTTGACCAGGTTTGGTTTCGGTAGCGACGTGAGTTCGACGTTGGCGATTAACAAGAAGAGGAGGCGTGGTTTGAGTGCTGTATGTTACGCGATGCCTCTTTCTGCTCGCAATCTTCAGTGGATCTCCACTATTTCTTCTGTGTAATCATCCTCTCGCTCTCTCTTGATCATGTGTGAAATAAGCATAGCATCATCATGTCTAATATAGATGATCTTATTATATTATTCAAGTTGTGCTGTTAATCATCGATGTTGGCTCCCTCAACGATGGATTTTACGACTTCCAATCTTTGAGACACGATTCTGTAGAATGAGGATTGAGTACTCAAGAGTTGTTAAATGTTTTGCTAAAATTCGTTTGCGTTCGCTATGTAATGAATTGCGTTTAAGGTGATAACATTCAGTGGCTACTTTTATATCTCCTTCCGTCGTGATGTTACAACGATCACCTTGATCTGCTGTTTCAGAGTCCATTGCACGTATCAAAGTAAAATTTTAAAACCCTAGATTTCTTCTCCAGGATTTTAATGCTCGCAAGGGGGACTGGGATCCAGAAGTCATTTATCGTTCCGCTATTTGCTCTTCAGGCTCCTGCAAGTGTTATCTCGTGGATTAAGTAAGCCTCTTGAAATCTCTCTATATACTGCCATCCATTTTCCCCTTACGATCACATAGATGCGTTGATTCTCTTTAAGAATTTTAATTTAGTCCTTCTAAGATCAGTATCTATCCGCAAGATTTATGAGCTATTAGTTCTAACTGGGATAATGTTTTGGTTATAACTTCAATTTCAGAGGAGAATATGGCATCTGGAGCGCATTTTTGGCACTTCTTGTTCGTCTGTTTTTCTTCATCCCTGGTATAGTCTCTCCTGATCTACCTCACACGATCATCTATGAATTTAATTGCTGGTTATCATTCACTTTATCCCGAAAGGGACTTGGTATATAGCTTGGCTCGAAACTTATTTATTTGAACCTCATTTTATTCAATTCATTGAAAGCATTCCATTTTGTACAATCCATTGAATGAGTAGAAAATTCATAGGAAGTCGGATGCTGGATTCTTTTGGATGTAGGTGAACTCGAGATACCATTCATATCATTACTTTTGGTGATTGTGGCCCCATATCAAGTCCAAAACTTAAGGTACACATTTGAACTCTTGATCAAATTGAACTTCATAATTTTTCCAATCTCAGCATTTAATTATTATCTCCCATTGGCAGGGGAACTCAAGAAGGGACCATCATCTCACTACTGATTGCAGCATATTTGGCTTTCCAGCATTTCTCTCGAGCTGGCAGCTTTCGGAGAGCTTTTGATCAGAATTCAATTGTTGCAACAGTGGCAATCATTTGTGTAACGGCTGTCTCAATCCTGCTCGTGATCTGA

mRNA sequence

CAAAATGAAAAACTTTGGTAATATTTTTGCTATCCATTATAAATAGAATAAACTGAAATTAAGATTGACGTGTTCGAGTTGAACGACAATTGGCCCAATCACTCCACTTCGGTAAGGCGGCTCTGGATTCTTCGTGTTCATCAGTCAGGCAAGCGACGATTTGCTTGTTGAATCAAAACTAGAGAATCGAAAGCATCGTTTACAGTCCAAATCTGAGAGAAGATAGAAGCTGAACCAGGCAACGGAAGAAAGGGGAAATGGTTTGTGTATTATCTTCTGCTATTTCACTTCACAGTCCTGTTCTATACAAATCCAAGCTATCCGCTCCTCTCTCTCTAAGATCCTCTCTGCCGAATGCAAAGCTCACGTTTAATCCTGCCGCTAAACAGAGTTTGATATGTTCTAATCCGATCAGGTTTGGTTTCGGTAGCGACGTGAGTTCGACGTTGGCGATTAACAAGAAGAGGAGGCGTGGTTTGAGTGCTGTATGTTACGCGATGCCTCTTTCTGCTCGCAATCTTCAGTGGATCTCCACTATTTCTTCTGTGATTTTAATGCTCGCAAGGGGGACTGGGATCCAGAAGTCATTTATCGTTCCGCTATTTGCTCTTCAGGCTCCTGCAAGTGTTATCTCGTGGATTAAAGGAGAATATGGCATCTGGAGCGCATTTTTGGCACTTCTTGTTCGTCTGTTTTTCTTCATCCCTGGTGAACTCGAGATACCATTCATATCATTACTTTTGGTGATTGTGGCCCCATATCAAGTCCAAAACTTAAGGGGAACTCAAGAAGGGACCATCATCTCACTACTGATTGCAGCATATTTGGCTTTCCAGCATTTCTCTCGAGCTGGCAGCTTTCGGAGAGCTTTTGATCAGAATTCAATTGTTGCAACAGTGGCAATCATTTGTGTAACGGCTGTCTCAATCCTGCTCGTGATCTGA

Coding sequence (CDS)

ATGGTTTGTGTATTATCTTCTGCTATTTCACTTCACAGTCCTGTTCTATACAAATCCAAGCTATCCGCTCCTCTCTCTCTAAGATCCTCTCTGCCGAATGCAAAGCTCACGTTTAATCCTGCCGCTAAACAGAGTTTGATATGTTCTAATCCGATCAGGTTTGGTTTCGGTAGCGACGTGAGTTCGACGTTGGCGATTAACAAGAAGAGGAGGCGTGGTTTGAGTGCTGTATGTTACGCGATGCCTCTTTCTGCTCGCAATCTTCAGTGGATCTCCACTATTTCTTCTGTGATTTTAATGCTCGCAAGGGGGACTGGGATCCAGAAGTCATTTATCGTTCCGCTATTTGCTCTTCAGGCTCCTGCAAGTGTTATCTCGTGGATTAAAGGAGAATATGGCATCTGGAGCGCATTTTTGGCACTTCTTGTTCGTCTGTTTTTCTTCATCCCTGGTGAACTCGAGATACCATTCATATCATTACTTTTGGTGATTGTGGCCCCATATCAAGTCCAAAACTTAAGGGGAACTCAAGAAGGGACCATCATCTCACTACTGATTGCAGCATATTTGGCTTTCCAGCATTTCTCTCGAGCTGGCAGCTTTCGGAGAGCTTTTGATCAGAATTCAATTGTTGCAACAGTGGCAATCATTTGTGTAACGGCTGTCTCAATCCTGCTCGTGATCTGA

Protein sequence

MVCVLSSAISLHSPVLYKSKLSAPLSLRSSLPNAKLTFNPAAKQSLICSNPIRFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFSRAGSFRRAFDQNSIVATVAIICVTAVSILLVI

Homology

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BLAST of Carg14549 vs. NCBI nr
Match: XP_022955155.1 (cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X2 [Cucurbita moschata] >KAG6573346.1 Cold-regulated 413 inner membrane protein 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012511.1 Cold-regulated inner membrane protein 2, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 421.0 bits (1081), Expect = 6.5e-114
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0


Query: 1   MVCVLSSAISLHSPVLYKSKLSAPLSLRSSLPNAKLTFNPAAKQSLICSNPIRFGFGSDV 60
           MVCVLSSAISLHSPVLYKSKLSAPLSLRSSLPNAKLTFNPAAKQSLICSNPIRFGFGSDV
Sbjct: 1   MVCVLSSAISLHSPVLYKSKLSAPLSLRSSLPNAKLTFNPAAKQSLICSNPIRFGFGSDV 60

Query: 61  SSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILMLARGTGIQKSFIVPLFALQA 120
           SSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILMLARGTGIQKSFIVPLFALQA
Sbjct: 61  SSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILMLARGTGIQKSFIVPLFALQA 120

Query: 121 PASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGT 180
           PASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGT
Sbjct: 121 PASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGT 180

Query: 181 IISLLIAAYLAFQHFSRAGSFRRAFDQNSIVATVAIICVTAVSILLVI 229
           IISLLIAAYLAFQHFSRAGSFRRAFDQNSIVATVAIICVTAVSILLVI
Sbjct: 181 IISLLIAAYLAFQHFSRAGSFRRAFDQNSIVATVAIICVTAVSILLVI 228

[Close]

BLAST of Carg14549 vs. NCBI nr
Match: XP_022955152.1 (cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X1 [Cucurbita moschata] >XP_022955153.1 cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X1 [Cucurbita moschata] >XP_022955154.1 cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 415.2 bits (1066), Expect = 3.6e-112
Identity = 228/232 (98.28%), Postives = 228/232 (98.28%), Query Frame = 0


Query: 1   MVCVLSSAISLHSPVLYKSKLSAPLSLRSSLPNAKLTFNPAAKQSLICSNPI----RFGF 60
           MVCVLSSAISLHSPVLYKSKLSAPLSLRSSLPNAKLTFNPAAKQSLICSNPI    RFGF
Sbjct: 1   MVCVLSSAISLHSPVLYKSKLSAPLSLRSSLPNAKLTFNPAAKQSLICSNPIRCLTRFGF 60

Query: 61  GSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILMLARGTGIQKSFIVPLF 120
           GSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILMLARGTGIQKSFIVPLF
Sbjct: 61  GSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILMLARGTGIQKSFIVPLF 120

Query: 121 ALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGT 180
           ALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGT
Sbjct: 121 ALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGT 180

Query: 181 QEGTIISLLIAAYLAFQHFSRAGSFRRAFDQNSIVATVAIICVTAVSILLVI 229
           QEGTIISLLIAAYLAFQHFSRAGSFRRAFDQNSIVATVAIICVTAVSILLVI
Sbjct: 181 QEGTIISLLIAAYLAFQHFSRAGSFRRAFDQNSIVATVAIICVTAVSILLVI 232

[Close]

BLAST of Carg14549 vs. NCBI nr
Match: XP_022994881.1 (cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 413.3 bits (1061), Expect = 1.4e-111
Identity = 224/228 (98.25%), Postives = 225/228 (98.68%), Query Frame = 0


Query: 1   MVCVLSSAISLHSPVLYKSKLSAPLSLRSSLPNAKLTFNPAAKQSLICSNPIRFGFGSDV 60
           MVCVLSSAISLHSP L+KSKLSAPLSLRSSLPNAKLTFNPAAKQS ICSNPIRFGFGSDV
Sbjct: 1   MVCVLSSAISLHSPFLHKSKLSAPLSLRSSLPNAKLTFNPAAKQSSICSNPIRFGFGSDV 60

Query: 61  SSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILMLARGTGIQKSFIVPLFALQA 120
           SSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILMLARGTGIQKSFIVPLFALQA
Sbjct: 61  SSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILMLARGTGIQKSFIVPLFALQA 120

Query: 121 PASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGT 180
           PASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGT
Sbjct: 121 PASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGT 180

Query: 181 IISLLIAAYLAFQHFSRAGSFRRAFDQNSIVATVAIICVTAVSILLVI 229
           IISLLIAAYLAFQHFSRAGSFRRAFDQNSIVATVAIICVTAVS LLVI
Sbjct: 181 IISLLIAAYLAFQHFSRAGSFRRAFDQNSIVATVAIICVTAVSFLLVI 228

[Close]

BLAST of Carg14549 vs. NCBI nr
Match: AXF54227.1 (COR1 [Cucurbita pepo])

HSP 1 Score: 409.1 bits (1050), Expect = 2.6e-110
Identity = 223/228 (97.81%), Postives = 223/228 (97.81%), Query Frame = 0


Query: 1   MVCVLSSAISLHSPVLYKSKLSAPLSLRSSLPNAKLTFNPAAKQSLICSNPIRFGFGSDV 60
           MVCVLSSAISLHSP L KSKLSAPLSLRSSLPNAKLTFNPAAKQS ICSNPIRFGFGSDV
Sbjct: 1   MVCVLSSAISLHSPFLCKSKLSAPLSLRSSLPNAKLTFNPAAKQSSICSNPIRFGFGSDV 60

Query: 61  SSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILMLARGTGIQKSFIVPLFALQA 120
           SSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILMLARGTGIQKSFIVPLFALQA
Sbjct: 61  SSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILMLARGTGIQKSFIVPLFALQA 120

Query: 121 PASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGT 180
           PASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGT
Sbjct: 121 PASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGT 180

Query: 181 IISLLIAAYLAFQHFSRAGSFRRAFDQNSIVATVAIICVTAVSILLVI 229
           IISLLIAAYLAFQHFS AGSFRRAFDQNSIVATVAIICVTAVS LLVI
Sbjct: 181 IISLLIAAYLAFQHFSLAGSFRRAFDQNSIVATVAIICVTAVSFLLVI 228

[Close]

BLAST of Carg14549 vs. NCBI nr
Match: XP_023542165.1 (cold-regulated 413 inner membrane protein 1, chloroplastic-like, partial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 408.3 bits (1048), Expect = 4.4e-110
Identity = 222/228 (97.37%), Postives = 223/228 (97.81%), Query Frame = 0


Query: 1   MVCVLSSAISLHSPVLYKSKLSAPLSLRSSLPNAKLTFNPAAKQSLICSNPIRFGFGSDV 60
           +VCVLSSAISLHSP L KSKLSAPLSLRSSLPNAKLTFNPAAKQ  ICSNPIRFGFGSDV
Sbjct: 9   IVCVLSSAISLHSPFLCKSKLSAPLSLRSSLPNAKLTFNPAAKQRSICSNPIRFGFGSDV 68

Query: 61  SSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILMLARGTGIQKSFIVPLFALQA 120
           SSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILMLARGTGIQKSFIVPLFALQA
Sbjct: 69  SSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILMLARGTGIQKSFIVPLFALQA 128

Query: 121 PASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGT 180
           PASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGT
Sbjct: 129 PASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGT 188

Query: 181 IISLLIAAYLAFQHFSRAGSFRRAFDQNSIVATVAIICVTAVSILLVI 229
           IISLLIAAYLAFQHFSRAGSFRRAFDQNSIVATVAIICVTAVS LLVI
Sbjct: 189 IISLLIAAYLAFQHFSRAGSFRRAFDQNSIVATVAIICVTAVSFLLVI 236

[Close]

BLAST of Carg14549 vs. ExPASy Swiss-Prot
Match: Q94AL8 (Cold-regulated 413 inner membrane protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=COR413IM1 PE=1 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 1.6e-59
Identity = 116/186 (62.37%), Postives = 152/186 (81.72%), Query Frame = 0


Query: 45  SLICSNPIRFGFGSDVSSTLA--INKKRRRGLSAVCYAMPLSARNLQWISTISSVILMLA 104
           S +C NP+R       ++T++  + K+R+RG S VCYA P+SA +LQWISTIS + LMLA
Sbjct: 40  SPVCFNPLRLSGDRQRTATVSTRVEKRRKRGSSVVCYAAPISANSLQWISTISCLALMLA 99

Query: 105 RGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLL 164
           RGTGI KS +VPLFAL AP+S+++WIKGEYG+W+AFLAL+ RLFF  PGELE+PFI+LLL
Sbjct: 100 RGTGIHKSVVVPLFALHAPSSIVAWIKGEYGVWAAFLALIARLFFTFPGELELPFIALLL 159

Query: 165 VIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFSRAGSFRRAFDQNSIVATVAIICVTAV 224
           VIVAPYQV N+RG QEG II++ I+ +LAFQHFSRAGS  +A+++ S++ATVAII VT V
Sbjct: 160 VIVAPYQVMNIRGKQEGAIIAIAISGFLAFQHFSRAGSLEKAYEKGSVLATVAIIGVTVV 219

Query: 225 SILLVI 229
           S+LL++
Sbjct: 220 SLLLLL 225

[Close]

BLAST of Carg14549 vs. ExPASy Swiss-Prot
Match: F4I1G5 (Cold-regulated 413 inner membrane protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=COR413IM2 PE=1 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 1.6e-59
Identity = 122/187 (65.24%), Postives = 149/187 (79.68%), Query Frame = 0


Query: 45  SLICSNPIRFGFGSDVSSTLA--INKKRRRGLSAVCYAMP-LSARNLQWISTISSVILML 104
           S++C NP+R       ++T++    K+R+RG S VCYA P LS  NLQWISTIS V LM 
Sbjct: 40  SVVCFNPLRLSADRQRTATVSARAEKRRKRGSSVVCYATPMLSVHNLQWISTISCVALMF 99

Query: 105 ARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLL 164
           ARGTGI KSF+VPLFALQAP  ++SW+KGEYGIW+AFLALL RLFF  P ELE+PFI+LL
Sbjct: 100 ARGTGIHKSFVVPLFALQAPMGIVSWMKGEYGIWAAFLALLTRLFFSFPVELELPFIALL 159

Query: 165 LVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFSRAGSFRRAFDQNSIVATVAIICVTA 224
           LVIVAPYQV ++RG QEG I+SL I+ +LAFQHFSRAG+ ++AFDQNS++ATVAII VT 
Sbjct: 160 LVIVAPYQVMSIRGKQEGAILSLAISCFLAFQHFSRAGTLQKAFDQNSVLATVAIIGVTV 219

Query: 225 VSILLVI 229
           VS L +I
Sbjct: 220 VSFLFLI 226

[Close]

BLAST of Carg14549 vs. ExPASy Swiss-Prot
Match: O23164 (Cold-regulated 413 plasma membrane protein 4 OS=Arabidopsis thaliana OX=3702 GN=At4g37220 PE=2 SV=2)

HSP 1 Score: 73.2 bits (178), Expect = 4.4e-12
Identity = 46/140 (32.86%), Postives = 78/140 (55.71%), Query Frame = 0


Query: 88  LQWISTISSVILMLARGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLV 147
           LQW ++I ++ L++   T     +  + +VP      P+ +  +  G++G W A +A++V
Sbjct: 50  LQWAASIFAIYLLILDRTNWKTKMLTTLLVPYIFFTLPSVIFQFFSGDFGKWIALIAIIV 109

Query: 148 RLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQEGTIISLLIAAYLAFQHFSRAGS 207
           RLFF    P  LEIP   +L+V+V+P  +   LR +  G +I L+IA YL  +H   +G 
Sbjct: 110 RLFFPKEFPEWLEIPVALILIVVVSPSLIAWTLRESWVGAVICLVIACYLFHEHIKASGG 169

Query: 208 FRRAFDQ-NSIVATVAIICV 220
           F+ +F Q N I  T+ I+ +
Sbjct: 170 FKNSFTQKNGISNTIGIVAL 189

[Close]

BLAST of Carg14549 vs. ExPASy Swiss-Prot
Match: Q9SVL6 (Cold-regulated 413 plasma membrane protein 2 OS=Arabidopsis thaliana OX=3702 GN=COR413PM2 PE=2 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.8e-11
Identity = 46/149 (30.87%), Postives = 86/149 (57.72%), Query Frame = 0


Query: 88  LQWISTISSVILMLARGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLV 147
           L+++++ +++ L++   T     +  S ++P   L  P+ + +++ G+ G W AF+A+++
Sbjct: 51  LKFLASFAAIYLLILDRTNWKTKMLTSLLIPYIFLSLPSVIFNFLSGDVGKWIAFVAVVL 110

Query: 148 RLFF--FIPGELEIPFISLLLVIVAP-YQVQNLRGTQEGTIISLLIAAYLAFQHFSRAGS 207
           RLFF    P  LE+P   +LL++V+P +   ++RGT  GT+ISL I  YL  +H   +G 
Sbjct: 111 RLFFPKHFPDWLEMPGSLILLLVVSPHFLAHHIRGTWIGTVISLFIGCYLLQEHIRASGG 170

Query: 208 FRRAFDQ-NSIVATVAIICVTAVSILLVI 229
           FR +F Q   +  T+ II +    +  +I
Sbjct: 171 FRNSFTQPRGVSNTLGIILLLVYPVWALI 199

[Close]

BLAST of Carg14549 vs. ExPASy Swiss-Prot
Match: Q9XIM7 (Cold-regulated 413 plasma membrane protein 1 OS=Arabidopsis thaliana OX=3702 GN=COR413PM1 PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 9.1e-10
Identity = 50/149 (33.56%), Postives = 80/149 (53.69%), Query Frame = 0


Query: 88  LQWISTISSV-ILMLAR---GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLV 147
           L+W+++I+++ +L+L R    T +  S ++P      P+ +    +GE G W AF+A++V
Sbjct: 48  LEWVASIAAIYLLVLDRTNWKTNMLTSLLIPYIFFSLPSLIFGIFRGEIGKWIAFVAVVV 107

Query: 148 RLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQEGTIISLLIAAYLAFQHFSRAGS 207
           +LFF       LE+P   +LL +VAP  +    R +  G  I L I  YL  +H   +G 
Sbjct: 108 QLFFPKHAREYLELPVALVLLAVVAPNLIAGTFRDSWIGLAICLGIGCYLLQEHIRASGG 167

Query: 208 FRRAFDQ-NSIVATVAIICVTAVSILLVI 229
           FR AF + N I  TV IIC+    +  +I
Sbjct: 168 FRNAFTKANGISNTVGIICLVVFPVWALI 196

[Close]

BLAST of Carg14549 vs. ExPASy TrEMBL
Match: A0A6J1GUE0 (cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457204 PE=3 SV=1)

HSP 1 Score: 421.0 bits (1081), Expect = 3.1e-114
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0


Query: 1   MVCVLSSAISLHSPVLYKSKLSAPLSLRSSLPNAKLTFNPAAKQSLICSNPIRFGFGSDV 60
           MVCVLSSAISLHSPVLYKSKLSAPLSLRSSLPNAKLTFNPAAKQSLICSNPIRFGFGSDV
Sbjct: 1   MVCVLSSAISLHSPVLYKSKLSAPLSLRSSLPNAKLTFNPAAKQSLICSNPIRFGFGSDV 60

Query: 61  SSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILMLARGTGIQKSFIVPLFALQA 120
           SSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILMLARGTGIQKSFIVPLFALQA
Sbjct: 61  SSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILMLARGTGIQKSFIVPLFALQA 120

Query: 121 PASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGT 180
           PASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGT
Sbjct: 121 PASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGT 180

Query: 181 IISLLIAAYLAFQHFSRAGSFRRAFDQNSIVATVAIICVTAVSILLVI 229
           IISLLIAAYLAFQHFSRAGSFRRAFDQNSIVATVAIICVTAVSILLVI
Sbjct: 181 IISLLIAAYLAFQHFSRAGSFRRAFDQNSIVATVAIICVTAVSILLVI 228

[Close]

BLAST of Carg14549 vs. ExPASy TrEMBL
Match: A0A6J1GT59 (cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457204 PE=3 SV=1)

HSP 1 Score: 415.2 bits (1066), Expect = 1.7e-112
Identity = 228/232 (98.28%), Postives = 228/232 (98.28%), Query Frame = 0


Query: 1   MVCVLSSAISLHSPVLYKSKLSAPLSLRSSLPNAKLTFNPAAKQSLICSNPI----RFGF 60
           MVCVLSSAISLHSPVLYKSKLSAPLSLRSSLPNAKLTFNPAAKQSLICSNPI    RFGF
Sbjct: 1   MVCVLSSAISLHSPVLYKSKLSAPLSLRSSLPNAKLTFNPAAKQSLICSNPIRCLTRFGF 60

Query: 61  GSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILMLARGTGIQKSFIVPLF 120
           GSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILMLARGTGIQKSFIVPLF
Sbjct: 61  GSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILMLARGTGIQKSFIVPLF 120

Query: 121 ALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGT 180
           ALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGT
Sbjct: 121 ALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGT 180

Query: 181 QEGTIISLLIAAYLAFQHFSRAGSFRRAFDQNSIVATVAIICVTAVSILLVI 229
           QEGTIISLLIAAYLAFQHFSRAGSFRRAFDQNSIVATVAIICVTAVSILLVI
Sbjct: 181 QEGTIISLLIAAYLAFQHFSRAGSFRRAFDQNSIVATVAIICVTAVSILLVI 232

[Close]

BLAST of Carg14549 vs. ExPASy TrEMBL
Match: A0A6J1K0I6 (cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111490472 PE=3 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 6.6e-112
Identity = 224/228 (98.25%), Postives = 225/228 (98.68%), Query Frame = 0


Query: 1   MVCVLSSAISLHSPVLYKSKLSAPLSLRSSLPNAKLTFNPAAKQSLICSNPIRFGFGSDV 60
           MVCVLSSAISLHSP L+KSKLSAPLSLRSSLPNAKLTFNPAAKQS ICSNPIRFGFGSDV
Sbjct: 1   MVCVLSSAISLHSPFLHKSKLSAPLSLRSSLPNAKLTFNPAAKQSSICSNPIRFGFGSDV 60

Query: 61  SSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILMLARGTGIQKSFIVPLFALQA 120
           SSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILMLARGTGIQKSFIVPLFALQA
Sbjct: 61  SSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILMLARGTGIQKSFIVPLFALQA 120

Query: 121 PASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGT 180
           PASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGT
Sbjct: 121 PASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGT 180

Query: 181 IISLLIAAYLAFQHFSRAGSFRRAFDQNSIVATVAIICVTAVSILLVI 229
           IISLLIAAYLAFQHFSRAGSFRRAFDQNSIVATVAIICVTAVS LLVI
Sbjct: 181 IISLLIAAYLAFQHFSRAGSFRRAFDQNSIVATVAIICVTAVSFLLVI 228

[Close]

BLAST of Carg14549 vs. ExPASy TrEMBL
Match: A0A345BTH0 (COR1 OS=Cucurbita pepo OX=3663 PE=2 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 1.2e-110
Identity = 223/228 (97.81%), Postives = 223/228 (97.81%), Query Frame = 0


Query: 1   MVCVLSSAISLHSPVLYKSKLSAPLSLRSSLPNAKLTFNPAAKQSLICSNPIRFGFGSDV 60
           MVCVLSSAISLHSP L KSKLSAPLSLRSSLPNAKLTFNPAAKQS ICSNPIRFGFGSDV
Sbjct: 1   MVCVLSSAISLHSPFLCKSKLSAPLSLRSSLPNAKLTFNPAAKQSSICSNPIRFGFGSDV 60

Query: 61  SSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILMLARGTGIQKSFIVPLFALQA 120
           SSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILMLARGTGIQKSFIVPLFALQA
Sbjct: 61  SSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILMLARGTGIQKSFIVPLFALQA 120

Query: 121 PASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGT 180
           PASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGT
Sbjct: 121 PASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGT 180

Query: 181 IISLLIAAYLAFQHFSRAGSFRRAFDQNSIVATVAIICVTAVSILLVI 229
           IISLLIAAYLAFQHFS AGSFRRAFDQNSIVATVAIICVTAVS LLVI
Sbjct: 181 IISLLIAAYLAFQHFSLAGSFRRAFDQNSIVATVAIICVTAVSFLLVI 228

[Close]

BLAST of Carg14549 vs. ExPASy TrEMBL
Match: A0A6J1K438 (cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111490472 PE=3 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 3.6e-110
Identity = 224/232 (96.55%), Postives = 225/232 (96.98%), Query Frame = 0


Query: 1   MVCVLSSAISLHSPVLYKSKLSAPLSLRSSLPNAKLTFNPAAKQSLICSNPI----RFGF 60
           MVCVLSSAISLHSP L+KSKLSAPLSLRSSLPNAKLTFNPAAKQS ICSNPI    RFGF
Sbjct: 1   MVCVLSSAISLHSPFLHKSKLSAPLSLRSSLPNAKLTFNPAAKQSSICSNPIRCLTRFGF 60

Query: 61  GSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILMLARGTGIQKSFIVPLF 120
           GSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILMLARGTGIQKSFIVPLF
Sbjct: 61  GSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILMLARGTGIQKSFIVPLF 120

Query: 121 ALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGT 180
           ALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGT
Sbjct: 121 ALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGT 180

Query: 181 QEGTIISLLIAAYLAFQHFSRAGSFRRAFDQNSIVATVAIICVTAVSILLVI 229
           QEGTIISLLIAAYLAFQHFSRAGSFRRAFDQNSIVATVAIICVTAVS LLVI
Sbjct: 181 QEGTIISLLIAAYLAFQHFSRAGSFRRAFDQNSIVATVAIICVTAVSFLLVI 232

[Close]

BLAST of Carg14549 vs. TAIR 10
Match: AT1G29395.1 (COLD REGULATED 314 INNER MEMBRANE 1 )

HSP 1 Score: 230.7 bits (587), Expect = 1.2e-60
Identity = 116/186 (62.37%), Postives = 152/186 (81.72%), Query Frame = 0


Query: 45  SLICSNPIRFGFGSDVSSTLA--INKKRRRGLSAVCYAMPLSARNLQWISTISSVILMLA 104
           S +C NP+R       ++T++  + K+R+RG S VCYA P+SA +LQWISTIS + LMLA
Sbjct: 40  SPVCFNPLRLSGDRQRTATVSTRVEKRRKRGSSVVCYAAPISANSLQWISTISCLALMLA 99

Query: 105 RGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLL 164
           RGTGI KS +VPLFAL AP+S+++WIKGEYG+W+AFLAL+ RLFF  PGELE+PFI+LLL
Sbjct: 100 RGTGIHKSVVVPLFALHAPSSIVAWIKGEYGVWAAFLALIARLFFTFPGELELPFIALLL 159

Query: 165 VIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFSRAGSFRRAFDQNSIVATVAIICVTAV 224
           VIVAPYQV N+RG QEG II++ I+ +LAFQHFSRAGS  +A+++ S++ATVAII VT V
Sbjct: 160 VIVAPYQVMNIRGKQEGAIIAIAISGFLAFQHFSRAGSLEKAYEKGSVLATVAIIGVTVV 219

Query: 225 SILLVI 229
           S+LL++
Sbjct: 220 SLLLLL 225

[Close]

BLAST of Carg14549 vs. TAIR 10
Match: AT1G29390.1 (cold regulated 314 thylakoid membrane 2 )

HSP 1 Score: 230.7 bits (587), Expect = 1.2e-60
Identity = 122/187 (65.24%), Postives = 149/187 (79.68%), Query Frame = 0


Query: 45  SLICSNPIRFGFGSDVSSTLA--INKKRRRGLSAVCYAMP-LSARNLQWISTISSVILML 104
           S++C NP+R       ++T++    K+R+RG S VCYA P LS  NLQWISTIS V LM 
Sbjct: 40  SVVCFNPLRLSADRQRTATVSARAEKRRKRGSSVVCYATPMLSVHNLQWISTISCVALMF 99

Query: 105 ARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLL 164
           ARGTGI KSF+VPLFALQAP  ++SW+KGEYGIW+AFLALL RLFF  P ELE+PFI+LL
Sbjct: 100 ARGTGIHKSFVVPLFALQAPMGIVSWMKGEYGIWAAFLALLTRLFFSFPVELELPFIALL 159

Query: 165 LVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFSRAGSFRRAFDQNSIVATVAIICVTA 224
           LVIVAPYQV ++RG QEG I+SL I+ +LAFQHFSRAG+ ++AFDQNS++ATVAII VT 
Sbjct: 160 LVIVAPYQVMSIRGKQEGAILSLAISCFLAFQHFSRAGTLQKAFDQNSVLATVAIIGVTV 219

Query: 225 VSILLVI 229
           VS L +I
Sbjct: 220 VSFLFLI 226

[Close]

BLAST of Carg14549 vs. TAIR 10
Match: AT1G29390.2 (cold regulated 314 thylakoid membrane 2 )

HSP 1 Score: 222.2 bits (565), Expect = 4.1e-58
Identity = 116/162 (71.60%), Postives = 136/162 (83.95%), Query Frame = 0


Query: 68  KKRRRGLSAVCYAMP-LSARNLQWISTISSVILMLARGTGIQKSFIVPLFALQAPASVIS 127
           K+R+RG S VCYA P LS  NLQWISTIS V LM ARGTGI KSF+VPLFALQAP  ++S
Sbjct: 22  KRRKRGSSVVCYATPMLSVHNLQWISTISCVALMFARGTGIHKSFVVPLFALQAPMGIVS 81

Query: 128 WIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLI 187
           W+KGEYGIW+AFLALL RLFF  P ELE+PFI+LLLVIVAPYQV ++RG QEG I+SL I
Sbjct: 82  WMKGEYGIWAAFLALLTRLFFSFPVELELPFIALLLVIVAPYQVMSIRGKQEGAILSLAI 141

Query: 188 AAYLAFQHFSRAGSFRRAFDQNSIVATVAIICVTAVSILLVI 229
           + +LAFQHFSRAG+ ++AFDQNS++ATVAII VT VS L +I
Sbjct: 142 SCFLAFQHFSRAGTLQKAFDQNSVLATVAIIGVTVVSFLFLI 183

[Close]

BLAST of Carg14549 vs. TAIR 10
Match: AT4G37220.1 (Cold acclimation protein WCOR413 family )

HSP 1 Score: 73.2 bits (178), Expect = 3.1e-13
Identity = 46/140 (32.86%), Postives = 78/140 (55.71%), Query Frame = 0


Query: 88  LQWISTISSVILMLARGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLV 147
           LQW ++I ++ L++   T     +  + +VP      P+ +  +  G++G W A +A++V
Sbjct: 50  LQWAASIFAIYLLILDRTNWKTKMLTTLLVPYIFFTLPSVIFQFFSGDFGKWIALIAIIV 109

Query: 148 RLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQEGTIISLLIAAYLAFQHFSRAGS 207
           RLFF    P  LEIP   +L+V+V+P  +   LR +  G +I L+IA YL  +H   +G 
Sbjct: 110 RLFFPKEFPEWLEIPVALILIVVVSPSLIAWTLRESWVGAVICLVIACYLFHEHIKASGG 169

Query: 208 FRRAFDQ-NSIVATVAIICV 220
           F+ +F Q N I  T+ I+ +
Sbjct: 170 FKNSFTQKNGISNTIGIVAL 189

[Close]

BLAST of Carg14549 vs. TAIR 10
Match: AT3G50830.1 (cold-regulated 413-plasma membrane 2 )

HSP 1 Score: 70.5 bits (171), Expect = 2.0e-12
Identity = 46/149 (30.87%), Postives = 86/149 (57.72%), Query Frame = 0


Query: 88  LQWISTISSVILMLARGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLV 147
           L+++++ +++ L++   T     +  S ++P   L  P+ + +++ G+ G W AF+A+++
Sbjct: 51  LKFLASFAAIYLLILDRTNWKTKMLTSLLIPYIFLSLPSVIFNFLSGDVGKWIAFVAVVL 110

Query: 148 RLFF--FIPGELEIPFISLLLVIVAP-YQVQNLRGTQEGTIISLLIAAYLAFQHFSRAGS 207
           RLFF    P  LE+P   +LL++V+P +   ++RGT  GT+ISL I  YL  +H   +G 
Sbjct: 111 RLFFPKHFPDWLEMPGSLILLLVVSPHFLAHHIRGTWIGTVISLFIGCYLLQEHIRASGG 170

Query: 208 FRRAFDQ-NSIVATVAIICVTAVSILLVI 229
           FR +F Q   +  T+ II +    +  +I
Sbjct: 171 FRNSFTQPRGVSNTLGIILLLVYPVWALI 199

The following BLAST results are available for this feature:

BLAST of Carg14549 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022955155.1	6.5e-114	100.00	cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X2 [Cucu...	[more]
XP_022955152.1	3.6e-112	98.28	cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X1 [Cucu...	[more]
XP_022994881.1	1.4e-111	98.25	cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X2 [Cucu...	[more]
AXF54227.1	2.6e-110	97.81	COR1 [Cucurbita pepo]	[more]
XP_023542165.1	4.4e-110	97.37	cold-regulated 413 inner membrane protein 1, chloroplastic-like, partial [Cucurb...	[more]

BLAST of Carg14549 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94AL8	1.6e-59	62.37	Cold-regulated 413 inner membrane protein 1, chloroplastic OS=Arabidopsis thalia...	[more]
F4I1G5	1.6e-59	65.24	Cold-regulated 413 inner membrane protein 2, chloroplastic OS=Arabidopsis thalia...	[more]
O23164	4.4e-12	32.86	Cold-regulated 413 plasma membrane protein 4 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9SVL6	2.8e-11	30.87	Cold-regulated 413 plasma membrane protein 2 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9XIM7	9.1e-10	33.56	Cold-regulated 413 plasma membrane protein 1 OS=Arabidopsis thaliana OX=3702 GN=...	[more]

BLAST of Carg14549 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GUE0	3.1e-114	100.00	cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X2 OS=Cu...	[more]
A0A6J1GT59	1.7e-112	98.28	cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X1 OS=Cu...	[more]
A0A6J1K0I6	6.6e-112	98.25	cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X2 OS=Cu...	[more]
A0A345BTH0	1.2e-110	97.81	COR1 OS=Cucurbita pepo OX=3663 PE=2 SV=1	[more]
A0A6J1K438	3.6e-110	96.55	cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X1 OS=Cu...	[more]

BLAST of Carg14549 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G29395.1	1.2e-60	62.37	COLD REGULATED 314 INNER MEMBRANE 1	[more]
AT1G29390.1	1.2e-60	65.24	cold regulated 314 thylakoid membrane 2	[more]
AT1G29390.2	4.1e-58	71.60	cold regulated 314 thylakoid membrane 2	[more]
AT4G37220.1	3.1e-13	32.86	Cold acclimation protein WCOR413 family	[more]
AT3G50830.1	2.0e-12	30.87	cold-regulated 413-plasma membrane 2	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008892	Cold-regulated 413 protein	PFAM	PF05562	WCOR413	coord: 65..219 e-value: 5.8E-54 score: 182.8
IPR008892	Cold-regulated 413 protein	PANTHER	PTHR33596	COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 2	coord: 41..228
None	No IPR available	PANTHER	PTHR33596:SF17	COLD-REGULATED 413 INNER MEMBRANE PROTEIN 1, CHLOROPLASTIC-RELATED	coord: 41..228

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg14549-RA	Carg14549-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane