Carg14520 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGAAATCACTATCTGAGTAAGAACATTGTAATGGTTTCTGTAGTTCGATGATTCTATATGTGATCAACCAAAATCAAATACGAGCCGTCAATCCAATGCCGCATTCCGATCAAAATCCGGACAAAACCAGAGTGGTCTGCTGCATCGGCGACGTCCATGGCTACTTACCCCAGATTTCAACGCCGCCCACATAACTTTCTTGGGCGATTATTGCGACAGGGGACCAAATACCCGAGAAGTAATCGATTTCTTGGTCGGTTTACCCTCCAGATACCCTGACCAGAAGCACGTTTTCCACGCCGGGAATCACGATTTGGTGCCTGATTGTGAGGGTTCCATTTTGGATGCTGGACCGACATTTGAATCCCATGGTGTTCCTCATGGATCTGCTGGTATCGTTGCCCTTTTCCATTTATACTTATTGCTGGGATGTTGCCTTGAATTCGTTATGTTTCATGTTTGAAATAAATCACTGTTGAAGCTGGTGTCGTGTTGAAGCTAGTGTTCTGTCTCTAAAATGTTCTGTTTCTTGTTCTATTCAAGATTTATGTCTTCATTGGCAATACTTCCATTTCTATGTTGGTTCTCATTTTGAATCTCTCTTTACGAGGCTACCTCGTGGAGCTTTGAACTTTTTAGATTTAGTCTCTACAAAATGAACGCATTAGCTCCCGTCTCATAGCTATTTAGATCTTGTTTGATGACTTCCGTTTTTTGTTTTCGGAAATTATGCTTGTTTTCTTGTCAATTCTTTACCAGTGTTCTTCATTTTTTTTAAAACATTTGAATTGTTAGTGTGAGATCTCACGTTAATTAGAGAGGGATACGAAGTGTTCCTTATAAAAGTATGGAAACCTCTCCCCAGTAGATGCGTTTTAAAACCGTGAGGTTGTTGAGGATATGTAACGGGCCTATGCTAGTGGTGGGCTTGAGTTGTTACAAATGGTATCAAAGTTGCACGTCGTGTTAGCAAGGACGTTGGCCCCCAAGTGGGGTGGATTTTGAGATCCCACGTTAGTTGAAGGGGGAACGAGCCATTCCTCGTAAGGGTATGGAAACCTCCGTGAGGAATGGTTTGGGGAGGGAGAAAGATGTTCAAGAGCAACTCAAGTTTTTGAAACCCAAAGACACCAAATTGCCCAAGATAGTGTCTTTGTGGGTGGAAAAACGTTTGGGATATCCCAAAGGTGAGGGCTCAAATTCTTACACATATCAGCTGTGTTCTTCTTTAAATGATACTGAAATTGAATTCCCGACACTTATGAGATCCCACATCGATTGGAAAGGGGAACGAAACATTTCTTATAAGGGTATGGAAACCTCTCCCTAGTAGATGCGTATTAAAATCGTGAGGTTTACGGAAATACATAACGGGCCAAAAAGGACAATATCTGATAGCGGTGGACTTGAGTTGTTACAAATGGTATCAGAGCCAGATACCGAGTTGTGTGCTAGCGAGGACGCTGGACCCCAAGGGGAGTGGATTGTGAGATCCCACATCAGTTGGAGAGGGGAGCAAAACATTTCTTATAAGGTGTGGAACCTCTTCCTAGCAAACACGTATTAAAATCGTGAAGCTGATGACAATACGTAACAGGCCAAAGAGGACAATATCTACTAGCAGTGGGCTTGGGTTTGGGCTGTTACAAAATGGTATGAGAGTCAGACACCGGTTTGTGTGCAAGCGAGGACGCTGGCCCTCAAGGGGTGGATTGTGAGATCCCACATCGGTTGGAGAGGGGAACGAAGCATTCCTTATAAGGGTGTGGAAACCTCTCCCTAGCAAACGCGTATTAAAACTGTGAAGCTGACGGTAATACATAACGGGCCAAAGAGAACAATATCTATTAACAATGGGCTTGGGCTTAACCCGGTACTAACTCACTAAAGTTGAGGCATATAGATTGTATTGATCTTGCAGGAAGTAGGTGAGGAGGCAACAATAGTTGTAAGTGGACACCATGGAAAGCTTCATATAGATGGCTTAAGACTCATCATTGTGCGCGACACTGATAATGTGAAACAGCAATCATCAAGGTCAGTCACAACTGGGAATTTAGCTGTATCATGTCTCATTTTATCTTGTCCAATCACTTCATGATGCATTATTGATTGATATCATAAGTTCACCTCAGACTGTTCTTGATAAGAAATTTTGGGCTCTATTTCTTGCTATGGCTACCTCACCTCTTCTATTGTGGTATTTGATCACGTTGTGAAGTTCTCTTCATCAAACATCTTATACGACATAGATTTAGTCATAGGCTGTCTTTCTTCCTTGTAACACCCTCAGCTTCACAAGGACAGTTTGTTTGAGTTACTAAGTCTTGGTTTTTCTTGCGTTTAGGACAGTTTGTGGAGTAG ATGAGAAATCACTATCTGAGTAAGAACATTGTAATGTTCGATGATTCTATATGTGATCAACCAAAATCAAATACGAGCCGTCAATCCAATGCCGCATTCCGATCAAAATCCGGACAAAACCAGAGTGGTCTGCTGCATCGGCGACGTCCATGGCTACTTACCCCAGATTTCAACGCCGCCCACATAACTTTCTTGGGCGATTATTGCGACAGGGGACCAAATACCCGAGAAGTAATCGATTTCTTGGTCGGTTTACCCTCCAGATACCCTGACCAGAAGCACGTTTTCCACGCCGGGAATCACGATTTGGTGCCTGATTGTGAGGGTTCCATTTTGGATGCTGGACCGACATTTGAATCCCATGGTGTTCCTCATGGATCTGCTGGACAGTTTGTGGAGTAG ATGAGAAATCACTATCTGAGTAAGAACATTGTAATGTTCGATGATTCTATATGTGATCAACCAAAATCAAATACGAGCCGTCAATCCAATGCCGCATTCCGATCAAAATCCGGACAAAACCAGAGTGGTCTGCTGCATCGGCGACGTCCATGGCTACTTACCCCAGATTTCAACGCCGCCCACATAACTTTCTTGGGCGATTATTGCGACAGGGGACCAAATACCCGAGAAGTAATCGATTTCTTGGTCGGTTTACCCTCCAGATACCCTGACCAGAAGCACGTTTTCCACGCCGGGAATCACGATTTGGTGCCTGATTGTGAGGGTTCCATTTTGGATGCTGGACCGACATTTGAATCCCATGGTGTTCCTCATGGATCTGCTGGACAGTTTGTGGAGTAG MRNHYLSKNIVMFDDSICDQPKSNTSRQSNAAFRSKSGQNQSGLLHRRRPWLLTPDFNAAHITFLGDYCDRGPNTREVIDFLVGLPSRYPDQKHVFHAGNHDLVPDCEGSILDAGPTFESHGVPHGSAGQFVE Homology
BLAST of Carg14520 vs. NCBI nr
Match: KAG7028092.1 (hypothetical protein SDJN02_09272, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 287.0 bits (733), Expect = 8.6e-74 Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0
BLAST of Carg14520 vs. NCBI nr
Match: KAG6596556.1 (Tyrosine-protein phosphatase RLPH2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 251.1 bits (640), Expect = 5.2e-63 Identity = 116/117 (99.15%), Postives = 116/117 (99.15%), Query Frame = 0
BLAST of Carg14520 vs. NCBI nr
Match: XP_023539531.1 (uncharacterized protein LOC111800172 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 234.6 bits (597), Expect = 5.0e-58 Identity = 109/117 (93.16%), Postives = 112/117 (95.73%), Query Frame = 0
BLAST of Carg14520 vs. NCBI nr
Match: BBH07683.1 (Calcineurin-like metallo-phosphoesterase superfamily protein [Prunus dulcis]) HSP 1 Score: 110.2 bits (274), Expect = 1.4e-20 Identity = 64/172 (37.21%), Postives = 78/172 (45.35%), Query Frame = 0
BLAST of Carg14520 vs. NCBI nr
Match: PON56000.1 (Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase [Trema orientale]) HSP 1 Score: 106.7 bits (265), Expect = 1.6e-19 Identity = 59/137 (43.07%), Postives = 67/137 (48.91%), Query Frame = 0
BLAST of Carg14520 vs. ExPASy Swiss-Prot
Match: Q9SR62 (Tyrosine-protein phosphatase RLPH2 OS=Arabidopsis thaliana OX=3702 GN=RLPH2 PE=1 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 1.3e-16 Identity = 51/135 (37.78%), Postives = 62/135 (45.93%), Query Frame = 0
BLAST of Carg14520 vs. ExPASy Swiss-Prot
Match: Q8LEC0 (Tyrosine-protein phosphatase At3g09960 OS=Arabidopsis thaliana OX=3702 GN=At3g09960 PE=2 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 1.1e-15 Identity = 50/136 (36.76%), Postives = 60/136 (44.12%), Query Frame = 0
BLAST of Carg14520 vs. ExPASy TrEMBL
Match: A0A4Y1RV99 (Calcineurin-like metallo-phosphoesterase superfamily protein OS=Prunus dulcis OX=3755 GN=Prudu_019687 PE=4 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 6.9e-21 Identity = 64/172 (37.21%), Postives = 78/172 (45.35%), Query Frame = 0
BLAST of Carg14520 vs. ExPASy TrEMBL
Match: A0A2P5C4I2 (Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase OS=Trema orientale OX=63057 GN=TorRG33x02_297660 PE=4 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 7.7e-20 Identity = 59/137 (43.07%), Postives = 67/137 (48.91%), Query Frame = 0
BLAST of Carg14520 vs. ExPASy TrEMBL
Match: A0A7J6GP09 (Metallophos domain-containing protein OS=Cannabis sativa OX=3483 GN=G4B88_030976 PE=4 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 2.9e-19 Identity = 60/132 (45.45%), Postives = 65/132 (49.24%), Query Frame = 0
BLAST of Carg14520 vs. ExPASy TrEMBL
Match: A0A2P5B238 (Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_278710 PE=4 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 3.8e-19 Identity = 58/137 (42.34%), Postives = 66/137 (48.18%), Query Frame = 0
BLAST of Carg14520 vs. ExPASy TrEMBL
Match: A0A5A7TR81 (Calcineurin-like phosphoesterase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G003620 PE=4 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 1.1e-18 Identity = 59/135 (43.70%), Postives = 63/135 (46.67%), Query Frame = 0
BLAST of Carg14520 vs. TAIR 10
Match: AT3G09970.1 (Calcineurin-like metallo-phosphoesterase superfamily protein ) HSP 1 Score: 87.4 bits (215), Expect = 9.3e-18 Identity = 51/135 (37.78%), Postives = 62/135 (45.93%), Query Frame = 0
BLAST of Carg14520 vs. TAIR 10
Match: AT3G09960.1 (Calcineurin-like metallo-phosphoesterase superfamily protein ) HSP 1 Score: 84.3 bits (207), Expect = 7.8e-17 Identity = 50/136 (36.76%), Postives = 60/136 (44.12%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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