Carg14470 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg14470
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	hybrid signal transduction histidine kinase L
Location	Carg_Chr18: 8423766 .. 8424281 (+)
RNA-Seq Expression	Carg14470
Synteny	Carg14470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGGAGTTTCAACAACAACAACAACAACCTCAGCAGCCTCAGCAGCCTCAGCAGGCGGCTCTGGTTTATCCCAGCTCCACCGCCGGCGTCAAGCCTCCATCCCACCATTCCAACGGTTCATTTGGGGCAGTTTTTATTGTTCTTGCTGTTATTGTTGTCTTATCAGCTCTTGCTTGCTTTCTTGGCCGCCTCTGCAACCGGCGAGTTGTAAACCAGAGGCGGAAGCCGGAGAAGACCCACGGCGGATCTCACTCCAGAGGGAAAGAACCCAAATTGCATCCTGATAAAGAAGGGGACATCGAATTTGGATTTGATTCAAGAAACCCAAATGGGAAAGCCAGTTTCCCACCTGGTGGAAATGGAGGATACAAAGGTAATGGTAATGACAACGGTAATAGCCATGGAAATAGCTTCAAACCCTTCGACAATGGCGGCGAAATGAGAAGCGAAATCAAACATGCTGATCATCATGAAGTAGTAGATATCAACTTCAGAGCTGGAGGACATGCTTGA

mRNA sequence

ATGTCGGAGTTTCAACAACAACAACAACAACCTCAGCAGCCTCAGCAGCCTCAGCAGGCGGCTCTGGTTTATCCCAGCTCCACCGCCGGCGTCAAGCCTCCATCCCACCATTCCAACGGTTCATTTGGGGCAGTTTTTATTGTTCTTGCTGTTATTGTTGTCTTATCAGCTCTTGCTTGCTTTCTTGGCCGCCTCTGCAACCGGCGAGTTGTAAACCAGAGGCGGAAGCCGGAGAAGACCCACGGCGGATCTCACTCCAGAGGGAAAGAACCCAAATTGCATCCTGATAAAGAAGGGGACATCGAATTTGGATTTGATTCAAGAAACCCAAATGGGAAAGCCAGTTTCCCACCTGGTGGAAATGGAGGATACAAAGGTAATGGTAATGACAACGGTAATAGCCATGGAAATAGCTTCAAACCCTTCGACAATGGCGGCGAAATGAGAAGCGAAATCAAACATGCTGATCATCATGAAGTAGTAGATATCAACTTCAGAGCTGGAGGACATGCTTGA

Coding sequence (CDS)

ATGTCGGAGTTTCAACAACAACAACAACAACCTCAGCAGCCTCAGCAGCCTCAGCAGGCGGCTCTGGTTTATCCCAGCTCCACCGCCGGCGTCAAGCCTCCATCCCACCATTCCAACGGTTCATTTGGGGCAGTTTTTATTGTTCTTGCTGTTATTGTTGTCTTATCAGCTCTTGCTTGCTTTCTTGGCCGCCTCTGCAACCGGCGAGTTGTAAACCAGAGGCGGAAGCCGGAGAAGACCCACGGCGGATCTCACTCCAGAGGGAAAGAACCCAAATTGCATCCTGATAAAGAAGGGGACATCGAATTTGGATTTGATTCAAGAAACCCAAATGGGAAAGCCAGTTTCCCACCTGGTGGAAATGGAGGATACAAAGGTAATGGTAATGACAACGGTAATAGCCATGGAAATAGCTTCAAACCCTTCGACAATGGCGGCGAAATGAGAAGCGAAATCAAACATGCTGATCATCATGAAGTAGTAGATATCAACTTCAGAGCTGGAGGACATGCTTGA

Protein sequence

MSEFQQQQQQPQQPQQPQQAALVYPSSTAGVKPPSHHSNGSFGAVFIVLAVIVVLSALACFLGRLCNRRVVNQRRKPEKTHGGSHSRGKEPKLHPDKEGDIEFGFDSRNPNGKASFPPGGNGGYKGNGNDNGNSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGHA

Homology

[Close]

BLAST of Carg14470 vs. NCBI nr
Match: KAG6573739.1 (hypothetical protein SDJN03_27626, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012813.1 hypothetical protein SDJN02_25566, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 334.3 bits (856), Expect = 6.0e-88
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0


Query: 1   MSEFQQQQQQPQQPQQPQQAALVYPSSTAGVKPPSHHSNGSFGAVFIVLAVIVVLSALAC 60
           MSEFQQQQQQPQQPQQPQQAALVYPSSTAGVKPPSHHSNGSFGAVFIVLAVIVVLSALAC
Sbjct: 1   MSEFQQQQQQPQQPQQPQQAALVYPSSTAGVKPPSHHSNGSFGAVFIVLAVIVVLSALAC 60

Query: 61  FLGRLCNRRVVNQRRKPEKTHGGSHSRGKEPKLHPDKEGDIEFGFDSRNPNGKASFPPGG 120
           FLGRLCNRRVVNQRRKPEKTHGGSHSRGKEPKLHPDKEGDIEFGFDSRNPNGKASFPPGG
Sbjct: 61  FLGRLCNRRVVNQRRKPEKTHGGSHSRGKEPKLHPDKEGDIEFGFDSRNPNGKASFPPGG 120

Query: 121 NGGYKGNGNDNGNSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGHA 172
           NGGYKGNGNDNGNSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGHA
Sbjct: 121 NGGYKGNGNDNGNSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGHA 171

[Close]

BLAST of Carg14470 vs. NCBI nr
Match: XP_023541867.1 (uncharacterized protein LOC111801886 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 325.9 bits (834), Expect = 2.1e-85
Identity = 169/172 (98.26%), Postives = 170/172 (98.84%), Query Frame = 0


Query: 1   MSEF-QQQQQQPQQPQQPQQAALVYPSSTAGVKPPSHHSNGSFGAVFIVLAVIVVLSALA 60
           MSEF QQQQQQPQQPQQPQQAALVYPSSTAGVKPPSHHSNGSFGAVFIVLAVIVVLSALA
Sbjct: 1   MSEFQQQQQQQPQQPQQPQQAALVYPSSTAGVKPPSHHSNGSFGAVFIVLAVIVVLSALA 60

Query: 61  CFLGRLCNRRVVNQRRKPEKTHGGSHSRGKEPKLHPDKEGDIEFGFDSRNPNGKASFPPG 120
           CFLGRLCNRRVVNQRRKPEKTHGGSHSRGKEPKLHPDKEGDIEFGFDSRNPNGKA+FPPG
Sbjct: 61  CFLGRLCNRRVVNQRRKPEKTHGGSHSRGKEPKLHPDKEGDIEFGFDSRNPNGKATFPPG 120

Query: 121 GNGGYKGNGNDNGNSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGHA 172
           GNGGYKGNGN NGNSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGHA
Sbjct: 121 GNGGYKGNGNGNGNSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGHA 172

[Close]

BLAST of Carg14470 vs. NCBI nr
Match: XP_022945533.1 (uncharacterized protein LOC111449741 [Cucurbita moschata])

HSP 1 Score: 323.9 bits (829), Expect = 8.1e-85
Identity = 168/171 (98.25%), Postives = 168/171 (98.25%), Query Frame = 0


Query: 1   MSEFQQQQQQPQQPQQPQQAALVYPSSTAGVKPPSHHSNGSFGAVFIVLAVIVVLSALAC 60
           MSEF QQQQQPQQPQQPQQAALVYPSSTAGVKPP HHSNGSFGAVFIVLAVIVVLSALAC
Sbjct: 1   MSEF-QQQQQPQQPQQPQQAALVYPSSTAGVKPPIHHSNGSFGAVFIVLAVIVVLSALAC 60

Query: 61  FLGRLCNRRVVNQRRKPEKTHGGSHSRGKEPKLHPDKEGDIEFGFDSRNPNGKASFPPGG 120
           FLGRLCNRRVVNQRRKPEKTHGGSHSRGKEPKLHPDKEGDIEFGFDSRNPNGKASFPPGG
Sbjct: 61  FLGRLCNRRVVNQRRKPEKTHGGSHSRGKEPKLHPDKEGDIEFGFDSRNPNGKASFPPGG 120

Query: 121 NGGYKGNGNDNGNSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGHA 172
           NGGYKGNGN NGNSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGHA
Sbjct: 121 NGGYKGNGNGNGNSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGHA 170

[Close]

BLAST of Carg14470 vs. NCBI nr
Match: XP_022966907.1 (uncharacterized protein LOC111466471 [Cucurbita maxima])

HSP 1 Score: 320.1 bits (819), Expect = 1.2e-83
Identity = 166/171 (97.08%), Postives = 169/171 (98.83%), Query Frame = 0


Query: 1   MSEFQQQQQQPQQPQQPQQAALVYPSSTAGVKPPSHHSNGSFGAVFIVLAVIVVLSALAC 60
           MSEFQQQQQQPQQPQQPQQAALVYPSSTAGVKPPSHHSNGSFGAVFIVLAVIVVLSALAC
Sbjct: 1   MSEFQQQQQQPQQPQQPQQAALVYPSSTAGVKPPSHHSNGSFGAVFIVLAVIVVLSALAC 60

Query: 61  FLGRLCNRRVVNQRRKPEKTHGGSHSRGKEPKLHPDKEGDIEFGFDSRNPNGKASFPPGG 120
           FLGRLCNRRVVNQRRKPEKTHG SHSRGKEPKLHPDKEGDIEFGFDSRNPNGKA+FPPGG
Sbjct: 61  FLGRLCNRRVVNQRRKPEKTHGRSHSRGKEPKLHPDKEGDIEFGFDSRNPNGKATFPPGG 120

Query: 121 NGGYKGNGNDNGNSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGHA 172
           NGGYKGNGND+GNSHGNSFKPF+NGGEMRSEIKHADHHE VDINFRAGGHA
Sbjct: 121 NGGYKGNGNDDGNSHGNSFKPFENGGEMRSEIKHADHHE-VDINFRAGGHA 170

[Close]

BLAST of Carg14470 vs. NCBI nr
Match: XP_038892720.1 (uncharacterized protein LOC120081701 [Benincasa hispida])

HSP 1 Score: 225.7 bits (574), Expect = 3.0e-55
Identity = 136/182 (74.73%), Postives = 142/182 (78.02%), Query Frame = 0


Query: 1   MSEFQQQQQQPQQPQQPQQAALVYPSSTAGV---KPPSHHSNGSFGAVFIVLAVIVVLSA 60
           MSE QQQQQQ  Q QQ QQ A VYP++ A V    PPSHHSNGSFGAVFIVLAVIVV+SA
Sbjct: 1   MSELQQQQQQQPQQQQQQQPAFVYPNTAATVGSQPPPSHHSNGSFGAVFIVLAVIVVISA 60

Query: 61  LACFLGRLCNRRVVN-QRRKPEKTHGGSHSRGKEPKLHPDKEGDIEFGFDSRNPNG-KAS 120
           LACFLGRLCNRRV N QR KPEKTH G+  RGKEPKLHPDKEGDIEFGFD RNPNG K  
Sbjct: 61  LACFLGRLCNRRVENGQRPKPEKTHSGARPRGKEPKLHPDKEGDIEFGFDLRNPNGNKGK 120

Query: 121 FP-PGGNGGYKG--NGNDNG----NSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAG 171
           FP  GGNGG KG  NGN NG    N HGNSFKPF+NGGE RSEIKH DHHE  D NF+A 
Sbjct: 121 FPSSGGNGGSKGKSNGNGNGTNGPNGHGNSFKPFENGGETRSEIKHTDHHE-GDFNFKAA 180

[Close]

BLAST of Carg14470 vs. ExPASy TrEMBL
Match: A0A6J1G163 (uncharacterized protein LOC111449741 OS=Cucurbita moschata OX=3662 GN=LOC111449741 PE=4 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 3.9e-85
Identity = 168/171 (98.25%), Postives = 168/171 (98.25%), Query Frame = 0


Query: 1   MSEFQQQQQQPQQPQQPQQAALVYPSSTAGVKPPSHHSNGSFGAVFIVLAVIVVLSALAC 60
           MSEF QQQQQPQQPQQPQQAALVYPSSTAGVKPP HHSNGSFGAVFIVLAVIVVLSALAC
Sbjct: 1   MSEF-QQQQQPQQPQQPQQAALVYPSSTAGVKPPIHHSNGSFGAVFIVLAVIVVLSALAC 60

Query: 61  FLGRLCNRRVVNQRRKPEKTHGGSHSRGKEPKLHPDKEGDIEFGFDSRNPNGKASFPPGG 120
           FLGRLCNRRVVNQRRKPEKTHGGSHSRGKEPKLHPDKEGDIEFGFDSRNPNGKASFPPGG
Sbjct: 61  FLGRLCNRRVVNQRRKPEKTHGGSHSRGKEPKLHPDKEGDIEFGFDSRNPNGKASFPPGG 120

Query: 121 NGGYKGNGNDNGNSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGHA 172
           NGGYKGNGN NGNSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGHA
Sbjct: 121 NGGYKGNGNGNGNSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGHA 170

[Close]

BLAST of Carg14470 vs. ExPASy TrEMBL
Match: A0A6J1HP92 (uncharacterized protein LOC111466471 OS=Cucurbita maxima OX=3661 GN=LOC111466471 PE=4 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 5.7e-84
Identity = 166/171 (97.08%), Postives = 169/171 (98.83%), Query Frame = 0


Query: 1   MSEFQQQQQQPQQPQQPQQAALVYPSSTAGVKPPSHHSNGSFGAVFIVLAVIVVLSALAC 60
           MSEFQQQQQQPQQPQQPQQAALVYPSSTAGVKPPSHHSNGSFGAVFIVLAVIVVLSALAC
Sbjct: 1   MSEFQQQQQQPQQPQQPQQAALVYPSSTAGVKPPSHHSNGSFGAVFIVLAVIVVLSALAC 60

Query: 61  FLGRLCNRRVVNQRRKPEKTHGGSHSRGKEPKLHPDKEGDIEFGFDSRNPNGKASFPPGG 120
           FLGRLCNRRVVNQRRKPEKTHG SHSRGKEPKLHPDKEGDIEFGFDSRNPNGKA+FPPGG
Sbjct: 61  FLGRLCNRRVVNQRRKPEKTHGRSHSRGKEPKLHPDKEGDIEFGFDSRNPNGKATFPPGG 120

Query: 121 NGGYKGNGNDNGNSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGHA 172
           NGGYKGNGND+GNSHGNSFKPF+NGGEMRSEIKHADHHE VDINFRAGGHA
Sbjct: 121 NGGYKGNGNDDGNSHGNSFKPFENGGEMRSEIKHADHHE-VDINFRAGGHA 170

[Close]

BLAST of Carg14470 vs. ExPASy TrEMBL
Match: A0A5A7ST81 (Hybrid signal transduction histidine kinase L OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G001050 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 3.2e-55
Identity = 135/190 (71.05%), Postives = 144/190 (75.79%), Query Frame = 0


Query: 1   MSEFQQQQQQP-QQPQQPQQAALVYP----SSTAGVKPPSHHSNGSFGAVFIVLAVIVVL 60
           MSE QQQQ+QP QQ QQ QQ A VYP    +S     PPSHHSNGSFGAVFIVLAVIVV+
Sbjct: 1   MSELQQQQEQPQQQQQQQQQPAYVYPDTAATSAGSQVPPSHHSNGSFGAVFIVLAVIVVI 60

Query: 61  SALACFLGRLCNRRVVN-QRRKPEKTHGGSH-SRGKEPKLHPDKEGDIEFGFDSRNPNGK 120
           SALACFLGRLCNRRV N QR KPEK+H G+  +RGKEPKLHPDKEGDIEFGFD RNP+GK
Sbjct: 61  SALACFLGRLCNRRVENHQRPKPEKSHAGARPTRGKEPKLHPDKEGDIEFGFDLRNPSGK 120

Query: 121 ASFPPG------GNGGYKGNGNDNG-------NSHGNSFKPFDNGGEMRSEIKHADHHEV 171
             FPPG      GNGG KG GN NG       N HGNSFKPF+NGGE RSEIKH DHHE 
Sbjct: 121 GKFPPGGNGNGNGNGGSKGKGNGNGPIGLNGPNGHGNSFKPFENGGETRSEIKHTDHHE- 180

[Close]

BLAST of Carg14470 vs. ExPASy TrEMBL
Match: E5GBJ1 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 3.2e-55
Identity = 135/190 (71.05%), Postives = 144/190 (75.79%), Query Frame = 0


Query: 1   MSEFQQQQQQP-QQPQQPQQAALVYP----SSTAGVKPPSHHSNGSFGAVFIVLAVIVVL 60
           MSE QQQQ+QP QQ QQ QQ A VYP    +S     PPSHHSNGSFGAVFIVLAVIVV+
Sbjct: 1   MSELQQQQEQPQQQQQQQQQPAYVYPDTAATSAGSQVPPSHHSNGSFGAVFIVLAVIVVI 60

Query: 61  SALACFLGRLCNRRVVN-QRRKPEKTHGGSH-SRGKEPKLHPDKEGDIEFGFDSRNPNGK 120
           SALACFLGRLCNRRV N QR KPEK+H G+  +RGKEPKLHPDKEGDIEFGFD RNP+GK
Sbjct: 61  SALACFLGRLCNRRVENHQRPKPEKSHAGARPTRGKEPKLHPDKEGDIEFGFDLRNPSGK 120

Query: 121 ASFPPG------GNGGYKGNGNDNG-------NSHGNSFKPFDNGGEMRSEIKHADHHEV 171
             FPPG      GNGG KG GN NG       N HGNSFKPF+NGGE RSEIKH DHHE 
Sbjct: 121 GKFPPGGNGNGNGNGGSKGKGNGNGPIGLNGPNGHGNSFKPFENGGETRSEIKHTDHHE- 180

[Close]

BLAST of Carg14470 vs. ExPASy TrEMBL
Match: A0A1S3BF63 (hybrid signal transduction histidine kinase L OS=Cucumis melo OX=3656 GN=LOC103489006 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 3.2e-55
Identity = 135/190 (71.05%), Postives = 144/190 (75.79%), Query Frame = 0


Query: 1   MSEFQQQQQQP-QQPQQPQQAALVYP----SSTAGVKPPSHHSNGSFGAVFIVLAVIVVL 60
           MSE QQQQ+QP QQ QQ QQ A VYP    +S     PPSHHSNGSFGAVFIVLAVIVV+
Sbjct: 1   MSELQQQQEQPQQQQQQQQQPAYVYPDTAATSAGSQVPPSHHSNGSFGAVFIVLAVIVVI 60

Query: 61  SALACFLGRLCNRRVVN-QRRKPEKTHGGSH-SRGKEPKLHPDKEGDIEFGFDSRNPNGK 120
           SALACFLGRLCNRRV N QR KPEK+H G+  +RGKEPKLHPDKEGDIEFGFD RNP+GK
Sbjct: 61  SALACFLGRLCNRRVENHQRPKPEKSHAGARPTRGKEPKLHPDKEGDIEFGFDLRNPSGK 120

Query: 121 ASFPPG------GNGGYKGNGNDNG-------NSHGNSFKPFDNGGEMRSEIKHADHHEV 171
             FPPG      GNGG KG GN NG       N HGNSFKPF+NGGE RSEIKH DHHE 
Sbjct: 121 GKFPPGGNGNGNGNGGSKGKGNGNGPIGLNGPNGHGNSFKPFENGGETRSEIKHTDHHE- 180

[Close]

BLAST of Carg14470 vs. TAIR 10
Match: AT1G70470.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23530.1); Has 64 Blast hits to 64 proteins in 22 species: Archae - 0; Bacteria - 2; Metazoa - 7; Fungi - 10; Plants - 43; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 70.5 bits (171), Expect = 1.5e-12
Identity = 59/145 (40.69%), Postives = 74/145 (51.03%), Query Frame = 0


Query: 10  QPQQPQQPQQAALVYPSSTAGVKPPSHHSNGSFGAVFIVLAVIVVLSALACFLGRLCNR- 69
           QPQ+ QQPQ       S+++   P S  S+GSFG  FIVLA I+VL+ALAC  GRLCNR 
Sbjct: 4   QPQEFQQPQVYPSTSSSTSSSFSPSSSGSSGSFGTAFIVLAAILVLAALACVFGRLCNRG 63

Query: 70  ------RVVNQRRKPEKTHGGSHSRGKEPKLHPDKEGDIEFGFDSRNPNGKASFPPGGNG 129
                 +  N+  K EK         +  +  P + GD+EFGFD + P G  S P G NG
Sbjct: 64  GKQHKDKNNNKASKHEKPSSKKSREIRPVEREPRERGDVEFGFDMKRP-GPMSKPTGRNG 123

Query: 130 GYKGNGNDNGNSHGNSFKPFDNGGE 148
           G    G DN    G        GG+
Sbjct: 124 GDIEFGFDNKRGGGGGGGGGGKGGK 147

[Close]

BLAST of Carg14470 vs. TAIR 10
Match: AT1G23530.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G70470.1); Has 38 Blast hits to 38 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 60.5 bits (145), Expect = 1.6e-09
Identity = 68/185 (36.76%), Postives = 85/185 (45.95%), Query Frame = 0


Query: 12  QQPQQPQQAALVYPSS------TAGVKPPSHH-SNGSFGAVFIVLAVIVVLSALACFLGR 71
           Q  QQ QQ  +VYP++          KP S   S+G+FG VFIVLAVI VLSALAC  GR
Sbjct: 4   QGVQQMQQPIVVYPNAYNKQYPDPSTKPSSSSGSSGNFGTVFIVLAVIFVLSALACVFGR 63

Query: 72  LCNR--RVVNQRRKPEKTHGGSHSRG----KEPKLHPDKEGDIEFGFDSRNPN--GKASF 131
           LCNR  R   Q+      H  + S+     +  +  P + GD++FGFD + P    K S 
Sbjct: 64  LCNRESRAAKQQHSKHPKHEKASSKKSREIRPVEREPRERGDMDFGFDMKRPEPIEKPSG 123

Query: 132 PPGGNG---GYKGNGNDNGNSHGNSFKPFDNGGEMRSEIKHA---------DHHEVVDIN 170
             GG     G+     + G   G        GG     IKHA         DHH   +I 
Sbjct: 124 RDGGEDIEFGFDNKRGERGREGGG------GGGPPPPNIKHAVRFKLPENGDHHSKGEI- 180

[Close]

BLAST of Carg14470 vs. TAIR 10
Match: AT1G74055.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; Has 24 Blast hits to 24 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 44.7 bits (104), Expect = 8.9e-05
Identity = 25/62 (40.32%), Postives = 37/62 (59.68%), Query Frame = 0


Query: 12 QQPQQPQQAALVYPSST-----AGVKPPSHHSNGSFGAVFIVLAVIVVLSALACFLGRLC 69
          QQPQQ      + P +T     A    P+H+S+ S G  F V++V+++L+ L+CFLGR C
Sbjct: 17 QQPQQQLGGNEITPMATNANLIAAPNAPNHYSSSSIGPFFAVISVLIILAVLSCFLGRFC 76

The following BLAST results are available for this feature:

BLAST of Carg14470 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6573739.1	6.0e-88	100.00	hypothetical protein SDJN03_27626, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023541867.1	2.1e-85	98.26	uncharacterized protein LOC111801886 [Cucurbita pepo subsp. pepo]	[more]
XP_022945533.1	8.1e-85	98.25	uncharacterized protein LOC111449741 [Cucurbita moschata]	[more]
XP_022966907.1	1.2e-83	97.08	uncharacterized protein LOC111466471 [Cucurbita maxima]	[more]
XP_038892720.1	3.0e-55	74.73	uncharacterized protein LOC120081701 [Benincasa hispida]	[more]

BLAST of Carg14470 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg14470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G163	3.9e-85	98.25	uncharacterized protein LOC111449741 OS=Cucurbita moschata OX=3662 GN=LOC1114497...	[more]
A0A6J1HP92	5.7e-84	97.08	uncharacterized protein LOC111466471 OS=Cucurbita maxima OX=3661 GN=LOC111466471...	[more]
A0A5A7ST81	3.2e-55	71.05	Hybrid signal transduction histidine kinase L OS=Cucumis melo var. makuwa OX=119...	[more]
E5GBJ1	3.2e-55	71.05	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A1S3BF63	3.2e-55	71.05	hybrid signal transduction histidine kinase L OS=Cucumis melo OX=3656 GN=LOC1034...	[more]

BLAST of Carg14470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G70470.1	1.5e-12	40.69	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G23530.1	1.6e-09	36.76	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G74055.1	8.9e-05	40.32	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 126..140
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..151
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..36
None	No IPR available	PANTHER	PTHR33429	OS02G0708000 PROTEIN-RELATED	coord: 1..148
None	No IPR available	PANTHER	PTHR33429:SF7	OS02G0708000 PROTEIN	coord: 1..148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg14470-RA	Carg14470-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane