Carg14288 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg14288
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	RING-type domain-containing protein
Location	Carg_Chr04: 10540014 .. 10542579 (-)
RNA-Seq Expression	Carg14288
Synteny	Carg14288

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTACGGACTCTACCCTCCATTTTCTTCATCGTCATAATCTCAGCTGAAACTTGTTCTTCTTATATTGAAGCTTTTTCTGACCACAAAAGGGCGAGTGGAGGTCATTTCAGTGACGCCGCCCTATTGACTAAAGGACAAACCGCCTAAAAGCTTGAGAAAAATAAGGGTTCTCGTTCTTTTTGGGTTTCGAAAGTGGGTTTGGGGTTAACCCTTCTTGATCTTCGGTGTTTTTTAAGGGTAGGGTTCATCTTTTGGCATAGCCCACTGGGAGGAGGAGCTTTACGCTTTGGTTTTCTGTTTGTTTTCAGTGGTTTCTTGTGGAAGAGGGAAGGGATCTTTCGGATTATGTATTATCAGCTGGAGAAATTCTCTCATCAGGATTCTTTGGAGGTTTTGGAGGCGGATATTCAGTATGCAAATTCTCTGTGAGTTTTCTTCTTCTTTTACTCTTCTTTTGCTCGTTTTAATTGTGTTGAGTTTTTTTTCTTGCTTTTCCGTTTCAATCGTGATGATCGGTTTCTTTGTTTGCAAGTTGAAAGAACGAATGGGTTGTGTTTCTGCCTACACTAGTTTGGTTTATCCCAAAATAGAAAGAAATTGCTGTTTGAGAAGGGGTTCGAATTGTTGGGTAACAGCGCAGACCCATCGCTGAGTAGATATCGTCCTTTTGAGCTTCTTGTTTTTAAATGCGTCTAGAGAGTAGTTCTCACACCCGAGGTTTTCATGCCCTTGTAAGGATTGTTTCCCTCTCCAGGTGTGATCTCTCTCACAGTCCACCTCCTTGGGGCCAAGTCCTTCAAGTTCCCACACTCTTATAAGGAATGTTATGTTCTCCTCTCCAACCGATGTGTGATCTCACAATTCACCCGCTTGGAGGCCAGCGTCCTTCACACCCGAGGTTCCCACACTCTTATAAGGAATGCTTTGTTCCCCTCTCCAACCAATGTGTGTTCTCACAATCCATTCCCTTGTGTCCCACGTCCTTCACACTCAAGGTTCCCACACTCTTATAAGCAATATTTTGTTTCCCTCTCCAAATGAGGTGTGATCTCACAATCCATTCCCTTGGGACCCAGCGTCCTTCACACCCGAGGTTCCCACATTCTTATAAGGAATGCTTTGTTTTCCTCTCCAACCGATGTGTGATCTCACAATTCACCCCCTCTTTGTTAGACGTCTGATTTGTTTGTTTGTTTGTTTGATTTTTGGTATTGTAGGGCGGCTGCAATCCCCATGGAAAAAGGGGGTGGCTATCTTCAAATGAAGTTGGTTTACAATCATTTGGCTCCTATTGCTCTGTTTTTGCTTCAATGGATGGACTGTTCTTGCACATGCTTGCTTCCAAGATATTTAAGCCTCTTCCACATACTTGTGTACAAGGTCTGTTGGCTTTTGTAGCTGTGTATTATTGAATGATTATAGGTTTCTTATTCTTGATTTTTTATCCATTCAGGTACATCCAGAGGGAAAACAAAAACGAAATATATCCAGGCATGGAAGGAAGGCAACTATTAGGGACTTCTACGGTACTCACTCGTTTAGTTTGATAGCTGATGTTCTTACCTTTTTAAGTAGTTCTGTGTATTCTAATCTTGTGTGTTTTTTCATATCATGAATACCAGCTATAATATTGCCTTCGCTTCAGCGAATCCACGGTAGTTTGGATAAGTTGGACGATTTCGAGGAAGAGCATCGTTGGGTTGAGATGCCTAGCACGAAGAGAGGTGATAAAGACGGTAGACTCATGAACATCGATATGAAACGAGAAGACGAGTGTGGTATTTGTTTGGAGCCATGCACGAAGATGGTTTTGCCTAATTGCTGTCATGCAATGTGCATCAAATGCTATCGAAATTGGTAAAAACAAGTCTTGTTAAGCATCTTCATTGCCTTTAAAGCGTTTTGAAGTGGCATTTATGCTCAATTGCTTGTTCTTCCTACGCTGTAGGAACACGAGGTCAGAGTCGTGTCCATTTTGTCGTGGCAGCTTAAAGAGAGTCAACTCGGAGGACTTATGGGTGCTCACCTGTAGCGATGATGTGGTTGATGCCGAAACCGTTTCCAAGGAGGATATGTTGTGCTTTCGTCGATATATTAACAGCCTGCCTAAAGACTATCCAGATGCACTCTTCGCAGTATATTCCGAATATCTAATTTAGTTCAGACGTCCGAGTAAACTGTATAGAGGGAAAATCCCGACGCGAAACGTGAAGGTCAGAACATATCCTCCCTGCTTAATATAGAATAGTTGATCATATGAAATGCTTAGTTAGAATTAATAATGAATCAGTGTAAGATGCCAATCAATCATCTCTGCATCTTGGCTCGTGTATGTTATATACTTGAAAGTGCCTTTTCTAATGCACTAATTGTCAATAAAGATGAATTTGGTCTCTGATGGAGTGCATCATATGTTTTGTTGCATGGATGGGATGATTGTGTTCGTGTAGTTTGGGGTGTGAGATCCTACATTGGTTAGAGAGGGGAACGAAACATTCCTTATAAGGGTGTGGAAACCTCTCCCTAGCAGATGCGTTTTAAAATCATGAGGTTGATGGCGATACG

mRNA sequence

ATTACGGACTCTACCCTCCATTTTCTTCATCGTCATAATCTCAGCTGAAACTTGTTCTTCTTATATTGAAGCTTTTTCTGACCACAAAAGGGCGAGTGGAGGTCATTTCAGTGACGCCGCCCTATTGACTAAAGGACAAACCGCCTAAAAGCTTGAGAAAAATAAGGGTTCTCGTTCTTTTTGGGTTTCGAAAGTGGGTTTGGGGTTAACCCTTCTTGATCTTCGGTGTTTTTTAAGGTGGTTTCTTGTGGAAGAGGGAAGGGATCTTTCGGATTATGTATTATCAGCTGGAGAAATTCTCTCATCAGGATTCTTTGGAGGTTTTGGAGGCGGATATTCAGTATGCAAATTCTCTGGCGGCTGCAATCCCCATGGAAAAAGGGGGTGGCTATCTTCAAATGAAGTTGGTTTACAATCATTTGGCTCCTATTGCTCTGTTTTTGCTTCAATGGATGGACTGTTCTTGCACATGCTTGCTTCCAAGATATTTAAGCCTCTTCCACATACTTGTGTACAAGGTACATCCAGAGGGAAAACAAAAACGAAATATATCCAGGCATGGAAGGAAGGCAACTATTAGGGACTTCTACGCTATAATATTGCCTTCGCTTCAGCGAATCCACGGTAGTTTGGATAAGTTGGACGATTTCGAGGAAGAGCATCGTTGGGTTGAGATGCCTAGCACGAAGAGAGGTGATAAAGACGGTAGACTCATGAACATCGATATGAAACGAGAAGACGAGTGTGGTATTTGTTTGGAGCCATGCACGAAGATGGTTTTGCCTAATTGCTGTCATGCAATGTGCATCAAATGCTATCGAAATTGGAACACGAGGTCAGAGTCGTGTCCATTTTGTCGTGGCAGCTTAAAGAGAGTCAACTCGGAGGACTTATGGGTGCTCACCTGTAGCGATGATGTGGTTGATGCCGAAACCGTTTCCAAGGAGGATATGTTGTGCTTTCGTCGATATATTAACAGCCTGCCTAAAGACTATCCAGATGCACTCTTCGCAGTATATTCCGAATATCTAATTTAGTTCAGACGTCCGAGTAAACTGTATAGAGGGAAAATCCCGACGCGAAACGTGAAGGTCAGAACATATCCTCCCTGCTTAATATAGAATAGTTGATCATATGAAATGCTTAGTTAGAATTAATAATGAATCAGTGTAAGATGCCAATCAATCATCTCTGCATCTTGGCTCGTGTATGTTATATACTTGAAAGTGCCTTTTCTAATGCACTAATTGTCAATAAAGATGAATTTGGTCTCTGATGGAGTGCATCATATGTTTTGTTGCATGGATGGGATGATTGTGTTCGTGTAGTTTGGGGTGTGAGATCCTACATTGGTTAGAGAGGGGAACGAAACATTCCTTATAAGGGTGTGGAAACCTCTCCCTAGCAGATGCGTTTTAAAATCATGAGGTTGATGGCGATACG

Coding sequence (CDS)

ATGTATTATCAGCTGGAGAAATTCTCTCATCAGGATTCTTTGGAGGTTTTGGAGGCGGATATTCAGTATGCAAATTCTCTGGCGGCTGCAATCCCCATGGAAAAAGGGGGTGGCTATCTTCAAATGAAGTTGGTTTACAATCATTTGGCTCCTATTGCTCTGTTTTTGCTTCAATGGATGGACTGTTCTTGCACATGCTTGCTTCCAAGATATTTAAGCCTCTTCCACATACTTGTGTACAAGGTACATCCAGAGGGAAAACAAAAACGAAATATATCCAGGCATGGAAGGAAGGCAACTATTAGGGACTTCTACGCTATAATATTGCCTTCGCTTCAGCGAATCCACGGTAGTTTGGATAAGTTGGACGATTTCGAGGAAGAGCATCGTTGGGTTGAGATGCCTAGCACGAAGAGAGGTGATAAAGACGGTAGACTCATGAACATCGATATGAAACGAGAAGACGAGTGTGGTATTTGTTTGGAGCCATGCACGAAGATGGTTTTGCCTAATTGCTGTCATGCAATGTGCATCAAATGCTATCGAAATTGGAACACGAGGTCAGAGTCGTGTCCATTTTGTCGTGGCAGCTTAAAGAGAGTCAACTCGGAGGACTTATGGGTGCTCACCTGTAGCGATGATGTGGTTGATGCCGAAACCGTTTCCAAGGAGGATATGTTGTGCTTTCGTCGATATATTAACAGCCTGCCTAAAGACTATCCAGATGCACTCTTCGCAGTATATTCCGAATATCTAATTTAG

Protein sequence

MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMEKGGGYLQMKLVYNHLAPIALFLLQWMDCSCTCLLPRYLSLFHILVYKVHPEGKQKRNISRHGRKATIRDFYAIILPSLQRIHGSLDKLDDFEEEHRWVEMPSTKRGDKDGRLMNIDMKREDECGICLEPCTKMVLPNCCHAMCIKCYRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDMLCFRRYINSLPKDYPDALFAVYSEYLI

Homology

[Close]

BLAST of Carg14288 vs. NCBI nr
Match: KAG7032333.1 (hypothetical protein SDJN02_06378 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 534.3 bits (1375), Expect = 5.9e-148
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0


Query: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMEKGGGYLQMKLVYNHLAPIALFLLQWM 60
           MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMEKGGGYLQMKLVYNHLAPIALFLLQWM
Sbjct: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMEKGGGYLQMKLVYNHLAPIALFLLQWM 60

Query: 61  DCSCTCLLPRYLSLFHILVYKVHPEGKQKRNISRHGRKATIRDFYAIILPSLQRIHGSLD 120
           DCSCTCLLPRYLSLFHILVYKVHPEGKQKRNISRHGRKATIRDFYAIILPSLQRIHGSLD
Sbjct: 61  DCSCTCLLPRYLSLFHILVYKVHPEGKQKRNISRHGRKATIRDFYAIILPSLQRIHGSLD 120

Query: 121 KLDDFEEEHRWVEMPSTKRGDKDGRLMNIDMKREDECGICLEPCTKMVLPNCCHAMCIKC 180
           KLDDFEEEHRWVEMPSTKRGDKDGRLMNIDMKREDECGICLEPCTKMVLPNCCHAMCIKC
Sbjct: 121 KLDDFEEEHRWVEMPSTKRGDKDGRLMNIDMKREDECGICLEPCTKMVLPNCCHAMCIKC 180

Query: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDMLCFRRYINSLPKDY 240
           YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDMLCFRRYINSLPKDY
Sbjct: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDMLCFRRYINSLPKDY 240

Query: 241 PDALFAVYSEYLI 254
           PDALFAVYSEYLI
Sbjct: 241 PDALFAVYSEYLI 253

[Close]

BLAST of Carg14288 vs. NCBI nr
Match: XP_022956578.1 (RING-H2 finger protein ATL47-like [Cucurbita moschata])

HSP 1 Score: 533.9 bits (1374), Expect = 7.6e-148
Identity = 252/253 (99.60%), Postives = 253/253 (100.00%), Query Frame = 0


Query: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMEKGGGYLQMKLVYNHLAPIALFLLQWM 60
           MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMEKGGGYLQMKLVYNHLAPIALFLLQWM
Sbjct: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMEKGGGYLQMKLVYNHLAPIALFLLQWM 60

Query: 61  DCSCTCLLPRYLSLFHILVYKVHPEGKQKRNISRHGRKATIRDFYAIILPSLQRIHGSLD 120
           DCSCTCLLPRYLSLFHILVYKVHPEGKQKRNISRHGRKATIRDFYAIILPSLQRIHGSLD
Sbjct: 61  DCSCTCLLPRYLSLFHILVYKVHPEGKQKRNISRHGRKATIRDFYAIILPSLQRIHGSLD 120

Query: 121 KLDDFEEEHRWVEMPSTKRGDKDGRLMNIDMKREDECGICLEPCTKMVLPNCCHAMCIKC 180
           KLDDFEEEHRW+EMPSTKRGDKDGRLMNIDMKREDECGICLEPCTKMVLPNCCHAMCIKC
Sbjct: 121 KLDDFEEEHRWIEMPSTKRGDKDGRLMNIDMKREDECGICLEPCTKMVLPNCCHAMCIKC 180

Query: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDMLCFRRYINSLPKDY 240
           YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDMLCFRRYINSLPKDY
Sbjct: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDMLCFRRYINSLPKDY 240

Query: 241 PDALFAVYSEYLI 254
           PDALFAVYSEYLI
Sbjct: 241 PDALFAVYSEYLI 253

[Close]

BLAST of Carg14288 vs. NCBI nr
Match: KAG6601570.1 (putative LRR receptor-like serine/threonine-protein kinase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 533.9 bits (1374), Expect = 7.6e-148
Identity = 252/253 (99.60%), Postives = 253/253 (100.00%), Query Frame = 0


Query: 1    MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMEKGGGYLQMKLVYNHLAPIALFLLQWM 60
            MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMEKGGGYLQMKLVYNHLAPIALFLLQWM
Sbjct: 894  MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMEKGGGYLQMKLVYNHLAPIALFLLQWM 953

Query: 61   DCSCTCLLPRYLSLFHILVYKVHPEGKQKRNISRHGRKATIRDFYAIILPSLQRIHGSLD 120
            DCSCTCLLPRYLSLFHILVYKVHPEGKQKRNISRHGRKATIRDFYAIILPSLQRIHGSLD
Sbjct: 954  DCSCTCLLPRYLSLFHILVYKVHPEGKQKRNISRHGRKATIRDFYAIILPSLQRIHGSLD 1013

Query: 121  KLDDFEEEHRWVEMPSTKRGDKDGRLMNIDMKREDECGICLEPCTKMVLPNCCHAMCIKC 180
            KLDDFEEEHRW+EMPSTKRGDKDGRLMNIDMKREDECGICLEPCTKMVLPNCCHAMCIKC
Sbjct: 1014 KLDDFEEEHRWIEMPSTKRGDKDGRLMNIDMKREDECGICLEPCTKMVLPNCCHAMCIKC 1073

Query: 181  YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDMLCFRRYINSLPKDY 240
            YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDMLCFRRYINSLPKDY
Sbjct: 1074 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDMLCFRRYINSLPKDY 1133

Query: 241  PDALFAVYSEYLI 254
            PDALFAVYSEYLI
Sbjct: 1134 PDALFAVYSEYLI 1146

[Close]

BLAST of Carg14288 vs. NCBI nr
Match: XP_023517374.1 (RING-H2 finger protein ATL47-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 529.3 bits (1362), Expect = 1.9e-146
Identity = 250/253 (98.81%), Postives = 251/253 (99.21%), Query Frame = 0


Query: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMEKGGGYLQMKLVYNHLAPIALFLLQWM 60
           MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMEKGGGYLQMKLVYNHLAPIALFLLQWM
Sbjct: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMEKGGGYLQMKLVYNHLAPIALFLLQWM 60

Query: 61  DCSCTCLLPRYLSLFHILVYKVHPEGKQKRNISRHGRKATIRDFYAIILPSLQRIHGSLD 120
           DCSCTCLLPRYLSLFHILVYKVHPEGKQKRNISRHGRKATIRDFYAIILPSLQRIHGSLD
Sbjct: 61  DCSCTCLLPRYLSLFHILVYKVHPEGKQKRNISRHGRKATIRDFYAIILPSLQRIHGSLD 120

Query: 121 KLDDFEEEHRWVEMPSTKRGDKDGRLMNIDMKREDECGICLEPCTKMVLPNCCHAMCIKC 180
           KLDDFEEEHRW+EMPS KRGDKDGRLMNIDMKREDECGICLEPCTKMVLPNCCHAMCIKC
Sbjct: 121 KLDDFEEEHRWIEMPSKKRGDKDGRLMNIDMKREDECGICLEPCTKMVLPNCCHAMCIKC 180

Query: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDMLCFRRYINSLPKDY 240
           YRNWN RSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDMLCFRRYINSLPKDY
Sbjct: 181 YRNWNMRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDMLCFRRYINSLPKDY 240

Query: 241 PDALFAVYSEYLI 254
           PDALFAVYSEYLI
Sbjct: 241 PDALFAVYSEYLI 253

[Close]

BLAST of Carg14288 vs. NCBI nr
Match: XP_022998497.1 (RING-H2 finger protein ATL47-like [Cucurbita maxima])

HSP 1 Score: 526.9 bits (1356), Expect = 9.3e-146
Identity = 249/253 (98.42%), Postives = 251/253 (99.21%), Query Frame = 0


Query: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMEKGGGYLQMKLVYNHLAPIALFLLQWM 60
           MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMEKGGGYLQMKLVYNHLAPIALFLLQWM
Sbjct: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMEKGGGYLQMKLVYNHLAPIALFLLQWM 60

Query: 61  DCSCTCLLPRYLSLFHILVYKVHPEGKQKRNISRHGRKATIRDFYAIILPSLQRIHGSLD 120
           DCSCTCLLPRYLSLFHILVYKVHPEGKQKRNISRHGRKATIRDFYAIILPSLQ+IHGSLD
Sbjct: 61  DCSCTCLLPRYLSLFHILVYKVHPEGKQKRNISRHGRKATIRDFYAIILPSLQQIHGSLD 120

Query: 121 KLDDFEEEHRWVEMPSTKRGDKDGRLMNIDMKREDECGICLEPCTKMVLPNCCHAMCIKC 180
           KLDDFEEEHRW+EMPS KRGDKDGRLMNIDMKREDECGICLE CTKMVLPNCCHAMCIKC
Sbjct: 121 KLDDFEEEHRWIEMPSKKRGDKDGRLMNIDMKREDECGICLEQCTKMVLPNCCHAMCIKC 180

Query: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDMLCFRRYINSLPKDY 240
           YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDMLCFRRYINSLPKDY
Sbjct: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDMLCFRRYINSLPKDY 240

Query: 241 PDALFAVYSEYLI 254
           PDALFAVYSEYLI
Sbjct: 241 PDALFAVYSEYLI 253

[Close]

BLAST of Carg14288 vs. ExPASy Swiss-Prot
Match: Q9M022 (E3 ubiquitin-protein ligase AIRP2 OS=Arabidopsis thaliana OX=3702 GN=AIRP2 PE=1 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 4.9e-57
Identity = 109/229 (47.60%), Postives = 151/229 (65.94%), Query Frame = 0


Query: 9   SHQDSLEVLEADIQYANSLAAAIPMEKGGGYLQMKLVYNHLAPIALFLLQWMDCSCTCLL 68
           S +DSL+ LEADIQ+AN+LA+  P E  GGY+QM+L Y+  A + LFLLQW DC      
Sbjct: 4   SFKDSLKALEADIQFANTLASEYPEEYDGGYVQMRLSYSPAAHLFLFLLQWTDCH----F 63

Query: 69  PRYLSLFHILVYKVHPEGKQKRNISRHGRKATIRDFYAIILPSLQRIHGSLDKLDDFEEE 128
              L L  IL+YK + +G  K  +S H RK +IR+FY ++ PSL ++HG +  +++ +++
Sbjct: 64  AGALGLLRILIYKAYVDG--KTTMSLHERKTSIREFYDVLFPSLLQLHGGITDVEERKQK 123

Query: 129 HRWVEMPSTKRGDKDGRLMNIDMKREDECGICLEPCTKMVLPNCCHAMCIKCYRNWNTRS 188
               +    K     G++  ID++RE+ECGICLE   K+VLP C H+MCI CYRNW  RS
Sbjct: 124 EICDKRYRKKDRTDKGKMSEIDLEREEECGICLEIRNKVVLPTCNHSMCINCYRNWRARS 183

Query: 189 ESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDMLCFRRYINSLP 238
           +SCPFCRGSLKRVNS DLW+ TCS ++ D   + KE++     YI+ LP
Sbjct: 184 QSCPFCRGSLKRVNSGDLWIYTCSAEIADLPAIYKENLKRLLIYIDKLP 226

[Close]

BLAST of Carg14288 vs. ExPASy Swiss-Prot
Match: Q4VBT5 (Probable E3 ubiquitin-protein ligase makorin-1 OS=Danio rerio OX=7955 GN=mkrn1 PE=2 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 4.9e-04
Identity = 24/76 (31.58%), Postives = 35/76 (46.05%), Query Frame = 0


Query: 149 IDMKREDECGICLE-------PCTKM--VLPNCCHAMCIKCYRNWNTRSE-------SCP 208
           I   ++  CG+C+E       P  +   +L NCCH  C+KC R W +  +       SCP
Sbjct: 228 IQRSKDMMCGVCMEVVFEKTNPSERRFGILSNCCHCYCLKCIRKWRSAKQFESKIIKSCP 287

[Close]

BLAST of Carg14288 vs. ExPASy TrEMBL
Match: A0A6J1GXA6 (RING-H2 finger protein ATL47-like OS=Cucurbita moschata OX=3662 GN=LOC111458273 PE=4 SV=1)

HSP 1 Score: 533.9 bits (1374), Expect = 3.7e-148
Identity = 252/253 (99.60%), Postives = 253/253 (100.00%), Query Frame = 0


Query: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMEKGGGYLQMKLVYNHLAPIALFLLQWM 60
           MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMEKGGGYLQMKLVYNHLAPIALFLLQWM
Sbjct: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMEKGGGYLQMKLVYNHLAPIALFLLQWM 60

Query: 61  DCSCTCLLPRYLSLFHILVYKVHPEGKQKRNISRHGRKATIRDFYAIILPSLQRIHGSLD 120
           DCSCTCLLPRYLSLFHILVYKVHPEGKQKRNISRHGRKATIRDFYAIILPSLQRIHGSLD
Sbjct: 61  DCSCTCLLPRYLSLFHILVYKVHPEGKQKRNISRHGRKATIRDFYAIILPSLQRIHGSLD 120

Query: 121 KLDDFEEEHRWVEMPSTKRGDKDGRLMNIDMKREDECGICLEPCTKMVLPNCCHAMCIKC 180
           KLDDFEEEHRW+EMPSTKRGDKDGRLMNIDMKREDECGICLEPCTKMVLPNCCHAMCIKC
Sbjct: 121 KLDDFEEEHRWIEMPSTKRGDKDGRLMNIDMKREDECGICLEPCTKMVLPNCCHAMCIKC 180

Query: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDMLCFRRYINSLPKDY 240
           YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDMLCFRRYINSLPKDY
Sbjct: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDMLCFRRYINSLPKDY 240

Query: 241 PDALFAVYSEYLI 254
           PDALFAVYSEYLI
Sbjct: 241 PDALFAVYSEYLI 253

[Close]

BLAST of Carg14288 vs. ExPASy TrEMBL
Match: A0A6J1K860 (RING-H2 finger protein ATL47-like OS=Cucurbita maxima OX=3661 GN=LOC111493108 PE=4 SV=1)

HSP 1 Score: 526.9 bits (1356), Expect = 4.5e-146
Identity = 249/253 (98.42%), Postives = 251/253 (99.21%), Query Frame = 0


Query: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMEKGGGYLQMKLVYNHLAPIALFLLQWM 60
           MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMEKGGGYLQMKLVYNHLAPIALFLLQWM
Sbjct: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMEKGGGYLQMKLVYNHLAPIALFLLQWM 60

Query: 61  DCSCTCLLPRYLSLFHILVYKVHPEGKQKRNISRHGRKATIRDFYAIILPSLQRIHGSLD 120
           DCSCTCLLPRYLSLFHILVYKVHPEGKQKRNISRHGRKATIRDFYAIILPSLQ+IHGSLD
Sbjct: 61  DCSCTCLLPRYLSLFHILVYKVHPEGKQKRNISRHGRKATIRDFYAIILPSLQQIHGSLD 120

Query: 121 KLDDFEEEHRWVEMPSTKRGDKDGRLMNIDMKREDECGICLEPCTKMVLPNCCHAMCIKC 180
           KLDDFEEEHRW+EMPS KRGDKDGRLMNIDMKREDECGICLE CTKMVLPNCCHAMCIKC
Sbjct: 121 KLDDFEEEHRWIEMPSKKRGDKDGRLMNIDMKREDECGICLEQCTKMVLPNCCHAMCIKC 180

Query: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDMLCFRRYINSLPKDY 240
           YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDMLCFRRYINSLPKDY
Sbjct: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDMLCFRRYINSLPKDY 240

Query: 241 PDALFAVYSEYLI 254
           PDALFAVYSEYLI
Sbjct: 241 PDALFAVYSEYLI 253

[Close]

BLAST of Carg14288 vs. ExPASy TrEMBL
Match: A0A5D3CUV6 (E3 ubiquitin-protein ligase RNF8-B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G001890 PE=4 SV=1)

HSP 1 Score: 493.4 bits (1269), Expect = 5.5e-136
Identity = 234/253 (92.49%), Postives = 240/253 (94.86%), Query Frame = 0


Query: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMEKGGGYLQMKLVYNHLAPIALFLLQWM 60
           MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPM KGG YLQMKLVYNHLAPI LFLLQWM
Sbjct: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWM 60

Query: 61  DCSCTCLLPRYLSLFHILVYKVHPEGKQKRNISRHGRKATIRDFYAIILPSLQRIHGSLD 120
           DCSCTCLLPRYL+LFHILVYKV+PEGKQK+NISRHGRKATIRDFYAIILPSLQRIHGSLD
Sbjct: 61  DCSCTCLLPRYLNLFHILVYKVYPEGKQKQNISRHGRKATIRDFYAIILPSLQRIHGSLD 120

Query: 121 KLDDFEEEHRWVEMPSTKRGDKDGRLMNIDMKREDECGICLEPCTKMVLPNCCHAMCIKC 180
           KLDD +E H W+EM S KRGDKDGRL NIDMKREDECGICLEPCTKMVLPNCCH+MCIKC
Sbjct: 121 KLDDCKEGHHWIEMSSKKRGDKDGRLKNIDMKREDECGICLEPCTKMVLPNCCHSMCIKC 180

Query: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDMLCFRRYINSLPKDY 240
           YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVD ETVSKEDML F RYINSLPKDY
Sbjct: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDTETVSKEDMLQFHRYINSLPKDY 240

Query: 241 PDALFAVYSEYLI 254
           PDALF VYSEYLI
Sbjct: 241 PDALFIVYSEYLI 253

[Close]

BLAST of Carg14288 vs. ExPASy TrEMBL
Match: A0A0A0KPZ5 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G591750 PE=4 SV=1)

HSP 1 Score: 493.4 bits (1269), Expect = 5.5e-136
Identity = 234/253 (92.49%), Postives = 240/253 (94.86%), Query Frame = 0


Query: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMEKGGGYLQMKLVYNHLAPIALFLLQWM 60
           MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPM KGG YLQMKLVYNHLAPI LFLLQWM
Sbjct: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWM 60

Query: 61  DCSCTCLLPRYLSLFHILVYKVHPEGKQKRNISRHGRKATIRDFYAIILPSLQRIHGSLD 120
           DCSCTCLLPRYL+LFHILVYKVHPEGKQK+NISRHGRKATIRDFYAIILPSLQRIHGSLD
Sbjct: 61  DCSCTCLLPRYLNLFHILVYKVHPEGKQKQNISRHGRKATIRDFYAIILPSLQRIHGSLD 120

Query: 121 KLDDFEEEHRWVEMPSTKRGDKDGRLMNIDMKREDECGICLEPCTKMVLPNCCHAMCIKC 180
           KLDD +EEH W+EM S KR DKDGRL NI+MKREDECGICLEPCTKMVLPNCCH+MCIKC
Sbjct: 121 KLDDCKEEHHWIEMSSKKRVDKDGRLKNIEMKREDECGICLEPCTKMVLPNCCHSMCIKC 180

Query: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDMLCFRRYINSLPKDY 240
           YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVD ETVSKEDML F RYINSLPKDY
Sbjct: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDTETVSKEDMLQFHRYINSLPKDY 240

Query: 241 PDALFAVYSEYLI 254
           PDALF VYSEYLI
Sbjct: 241 PDALFIVYSEYLI 253

[Close]

BLAST of Carg14288 vs. ExPASy TrEMBL
Match: A0A1S3BE96 (E3 ubiquitin-protein ligase RNF8-B OS=Cucumis melo OX=3656 GN=LOC103488929 PE=4 SV=1)

HSP 1 Score: 493.4 bits (1269), Expect = 5.5e-136
Identity = 234/253 (92.49%), Postives = 240/253 (94.86%), Query Frame = 0


Query: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMEKGGGYLQMKLVYNHLAPIALFLLQWM 60
           MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPM KGG YLQMKLVYNHLAPI LFLLQWM
Sbjct: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWM 60

Query: 61  DCSCTCLLPRYLSLFHILVYKVHPEGKQKRNISRHGRKATIRDFYAIILPSLQRIHGSLD 120
           DCSCTCLLPRYL+LFHILVYKV+PEGKQK+NISRHGRKATIRDFYAIILPSLQRIHGSLD
Sbjct: 61  DCSCTCLLPRYLNLFHILVYKVYPEGKQKQNISRHGRKATIRDFYAIILPSLQRIHGSLD 120

Query: 121 KLDDFEEEHRWVEMPSTKRGDKDGRLMNIDMKREDECGICLEPCTKMVLPNCCHAMCIKC 180
           KLDD +E H W+EM S KRGDKDGRL NIDMKREDECGICLEPCTKMVLPNCCH+MCIKC
Sbjct: 121 KLDDCKEGHHWIEMSSKKRGDKDGRLKNIDMKREDECGICLEPCTKMVLPNCCHSMCIKC 180

Query: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDMLCFRRYINSLPKDY 240
           YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVD ETVSKEDML F RYINSLPKDY
Sbjct: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDTETVSKEDMLQFHRYINSLPKDY 240

Query: 241 PDALFAVYSEYLI 254
           PDALF VYSEYLI
Sbjct: 241 PDALFIVYSEYLI 253

[Close]

BLAST of Carg14288 vs. TAIR 10
Match: AT1G24440.1 (RING/U-box superfamily protein )

HSP 1 Score: 343.6 bits (880), Expect = 1.4e-94
Identity = 174/258 (67.44%), Postives = 205/258 (79.46%), Query Frame = 0


Query: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMEKGGGYLQMKLVYNHLAPIALFLLQWM 60
           MYYQL K S++DSL++LEADI++AN LAA IPM K G  LQMKLV ++LAP  +FLLQWM
Sbjct: 1   MYYQLTKSSYRDSLKILEADIEHANGLAAEIPMGKSGVRLQMKLVCSNLAPFFIFLLQWM 60

Query: 61  DCSCTCLLPRYLSLFHILVYKVHPEGKQKRNISRHGRKATIRDFYAIILPSLQRIHGSLD 120
           D S  CLLPRY   FHIL+YKV  +G+  R  SR+GRKATIR+FY +ILPSL+R+H +  
Sbjct: 61  DFS--CLLPRYFDFFHILIYKVRADGRWNR--SRYGRKATIREFYGVILPSLERLHINFA 120

Query: 121 KLDDFEEEHRWVEMP---STKRGDKDG-RLMN-IDMKREDECGICLEPCTKMVLPNCCHA 180
            L D   E  W   P   + K+ D +G R MN ID++REDECGICLEPCTKMVLPNCCHA
Sbjct: 121 DLPD---ESLWYPNPKAITKKQYDIEGSRYMNSIDLEREDECGICLEPCTKMVLPNCCHA 180

Query: 181 MCIKCYRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDMLCFRRYINS 240
           MCIKCYRNWNT+SESCPFCRGS+KRVNSEDLWVLTC +DVVD ETV+KED+L F  +INS
Sbjct: 181 MCIKCYRNWNTKSESCPFCRGSIKRVNSEDLWVLTCDEDVVDPETVTKEDLLRFYLHINS 240

Query: 241 LPKDYPDALFAVYSEYLI 254
           LPKDYP+A F VY+EYLI
Sbjct: 241 LPKDYPEAAFLVYNEYLI 251

[Close]

BLAST of Carg14288 vs. TAIR 10
Match: AT1G13195.1 (RING/U-box superfamily protein )

HSP 1 Score: 310.8 bits (795), Expect = 9.8e-85
Identity = 149/245 (60.82%), Postives = 189/245 (77.14%), Query Frame = 0


Query: 9   SHQDSLEVLEADIQYANSLAAAIPMEKGGGYLQMKLVYNHLAPIALFLLQWMDCSCTCLL 68
           S+ +SL+VLEAD+Q+ANSLA AIPM K    LQMKLV+++ A + LFLL+W+D S +CL+
Sbjct: 15  SYYESLKVLEADVQHANSLAEAIPMGKNNVRLQMKLVHSNFASLLLFLLRWIDLSSSCLI 74

Query: 69  PRYLSLFHILVYKVHPEGKQKRNISRHGRKATIRDFYAIILPSLQRIHGSLDKLD--DFE 128
           PRYL+LFH+LVYKV  +G+ K  ++ HGRKATI +FY +ILPSLQ +H +LD+L+  D  
Sbjct: 75  PRYLNLFHVLVYKVQSDGQPK--LTTHGRKATISEFYGVILPSLQLLHSNLDELETTDIG 134

Query: 129 EEHRWVEMPSTKRGDKDGRLMNIDMKREDECGICLEPCTKMVLPNCCHAMCIKCYRNWNT 188
            + + +    TK   +  R  N  ++RE+ECGICLE CTKMVLPNCCH+MCIKCYRNWN 
Sbjct: 135 FDLKRLSKKITKEA-RSSRFSNAGLEREEECGICLETCTKMVLPNCCHSMCIKCYRNWNL 194

Query: 189 RSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDMLCFRRYINSLPKDYPDALFA 248
           +S+SCPFCRGS+KRVNSEDLWVL   +DVVD  T S+ED+  F  YINSLPKDYP+ALF 
Sbjct: 195 KSQSCPFCRGSMKRVNSEDLWVLAGDNDVVDTRTASREDLFRFYLYINSLPKDYPEALFV 254

Query: 249 VYSEY 252
           VY EY
Sbjct: 255 VYYEY 256

[Close]

BLAST of Carg14288 vs. TAIR 10
Match: AT1G13195.2 (RING/U-box superfamily protein )

HSP 1 Score: 278.1 bits (710), Expect = 7.0e-75
Identity = 132/221 (59.73%), Postives = 167/221 (75.57%), Query Frame = 0


Query: 33  MEKGGGYLQMKLVYNHLAPIALFLLQWMDCSCTCLLPRYLSLFHILVYKVHPEGKQKRNI 92
           M K    LQMKLV+++ A + LFLL+W+D S +CL+PRYL+LFH+LVYKV  +G+ K  +
Sbjct: 1   MGKNNVRLQMKLVHSNFASLLLFLLRWIDLSSSCLIPRYLNLFHVLVYKVQSDGQPK--L 60

Query: 93  SRHGRKATIRDFYAIILPSLQRIHGSLDKLD--DFEEEHRWVEMPSTKRGDKDGRLMNID 152
           + HGRKATI +FY +ILPSLQ +H +LD+L+  D   + + +    TK   +  R  N  
Sbjct: 61  TTHGRKATISEFYGVILPSLQLLHSNLDELETTDIGFDLKRLSKKITKEA-RSSRFSNAG 120

Query: 153 MKREDECGICLEPCTKMVLPNCCHAMCIKCYRNWNTRSESCPFCRGSLKRVNSEDLWVLT 212
           ++RE+ECGICLE CTKMVLPNCCH+MCIKCYRNWN +S+SCPFCRGS+KRVNSEDLWVL 
Sbjct: 121 LEREEECGICLETCTKMVLPNCCHSMCIKCYRNWNLKSQSCPFCRGSMKRVNSEDLWVLA 180

Query: 213 CSDDVVDAETVSKEDMLCFRRYINSLPKDYPDALFAVYSEY 252
             +DVVD  T S+ED+  F  YINSLPKDYP+ALF VY EY
Sbjct: 181 GDNDVVDTRTASREDLFRFYLYINSLPKDYPEALFVVYYEY 218

[Close]

BLAST of Carg14288 vs. TAIR 10
Match: AT5G01520.1 (RING/U-box superfamily protein )

HSP 1 Score: 222.6 bits (566), Expect = 3.5e-58
Identity = 109/229 (47.60%), Postives = 151/229 (65.94%), Query Frame = 0


Query: 9   SHQDSLEVLEADIQYANSLAAAIPMEKGGGYLQMKLVYNHLAPIALFLLQWMDCSCTCLL 68
           S +DSL+ LEADIQ+AN+LA+  P E  GGY+QM+L Y+  A + LFLLQW DC      
Sbjct: 4   SFKDSLKALEADIQFANTLASEYPEEYDGGYVQMRLSYSPAAHLFLFLLQWTDCH----F 63

Query: 69  PRYLSLFHILVYKVHPEGKQKRNISRHGRKATIRDFYAIILPSLQRIHGSLDKLDDFEEE 128
              L L  IL+YK + +G  K  +S H RK +IR+FY ++ PSL ++HG +  +++ +++
Sbjct: 64  AGALGLLRILIYKAYVDG--KTTMSLHERKTSIREFYDVLFPSLLQLHGGITDVEERKQK 123

Query: 129 HRWVEMPSTKRGDKDGRLMNIDMKREDECGICLEPCTKMVLPNCCHAMCIKCYRNWNTRS 188
               +    K     G++  ID++RE+ECGICLE   K+VLP C H+MCI CYRNW  RS
Sbjct: 124 EICDKRYRKKDRTDKGKMSEIDLEREEECGICLEIRNKVVLPTCNHSMCINCYRNWRARS 183

Query: 189 ESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDMLCFRRYINSLP 238
           +SCPFCRGSLKRVNS DLW+ TCS ++ D   + KE++     YI+ LP
Sbjct: 184 QSCPFCRGSLKRVNSGDLWIYTCSAEIADLPAIYKENLKRLLIYIDKLP 226

[Close]

BLAST of Carg14288 vs. TAIR 10
Match: AT3G47160.1 (RING/U-box superfamily protein )

HSP 1 Score: 209.1 bits (531), Expect = 4.0e-54
Identity = 109/242 (45.04%), Postives = 150/242 (61.98%), Query Frame = 0


Query: 5   LEKFSHQDSLEVLEADIQYANSLAAAIPMEKGGGYLQMKLVYNHLAPIALFLLQWMDCSC 64
           + K S +DSL+ LEADIQ+AN++A   P EK G  +QM+L Y   A   LFL+QW DC  
Sbjct: 1   MAKVSFKDSLKALEADIQHANTVALDYPREKDGARVQMRLSYTPAAQFLLFLVQWTDCH- 60

Query: 65  TCLLPRYLSLFHILVYKVHPEGKQKRNISRHGRKATIRDFYAIILPSLQRIHGSLDKLDD 124
              L   L L  +L+Y  + +G  K  +S + RK +I+DFYA+I PSL ++   +  LDD
Sbjct: 61  ---LAGTLGLLRVLIYMTYADG--KTTMSVYERKTSIKDFYAVIFPSLLQLERGITDLDD 120

Query: 125 FEEEHRWVEMPSTKRGDKDGRLMNIDMKREDECGICLEPCTKMVLPNCCHAMCIKCYRNW 184
            +++         K   +  +L  ID++RE+ECGIC+E    +VLPNC H++CIKCYR+W
Sbjct: 121 RKQKEVCKIRYRNKDETEKVKLSEIDIEREEECGICMEMNNMVVLPNCTHSLCIKCYRDW 180

Query: 185 NTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDMLCFRRYINSLPKDYPDAL 244
           + RSESCPFCR SLKRVNS DLW+L    D V+  T+ +E+      YI  LP   PD +
Sbjct: 181 HGRSESCPFCRDSLKRVNSGDLWMLMEKSDTVNMYTIERENKKRLFVYIEKLPLVVPDQV 236

Query: 245 FA 247
           FA
Sbjct: 241 FA 236

The following BLAST results are available for this feature:

BLAST of Carg14288 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7032333.1	5.9e-148	100.00	hypothetical protein SDJN02_06378 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022956578.1	7.6e-148	99.60	RING-H2 finger protein ATL47-like [Cucurbita moschata]	[more]
KAG6601570.1	7.6e-148	99.60	putative LRR receptor-like serine/threonine-protein kinase, partial [Cucurbita a...	[more]
XP_023517374.1	1.9e-146	98.81	RING-H2 finger protein ATL47-like [Cucurbita pepo subsp. pepo]	[more]
XP_022998497.1	9.3e-146	98.42	RING-H2 finger protein ATL47-like [Cucurbita maxima]	[more]

BLAST of Carg14288 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M022	4.9e-57	47.60	E3 ubiquitin-protein ligase AIRP2 OS=Arabidopsis thaliana OX=3702 GN=AIRP2 PE=1 ...	[more]
Q4VBT5	4.9e-04	31.58	Probable E3 ubiquitin-protein ligase makorin-1 OS=Danio rerio OX=7955 GN=mkrn1 P...	[more]

BLAST of Carg14288 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GXA6	3.7e-148	99.60	RING-H2 finger protein ATL47-like OS=Cucurbita moschata OX=3662 GN=LOC111458273 ...	[more]
A0A6J1K860	4.5e-146	98.42	RING-H2 finger protein ATL47-like OS=Cucurbita maxima OX=3661 GN=LOC111493108 PE...	[more]
A0A5D3CUV6	5.5e-136	92.49	E3 ubiquitin-protein ligase RNF8-B OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A0A0KPZ5	5.5e-136	92.49	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G591750 P...	[more]
A0A1S3BE96	5.5e-136	92.49	E3 ubiquitin-protein ligase RNF8-B OS=Cucumis melo OX=3656 GN=LOC103488929 PE=4 ...	[more]

BLAST of Carg14288 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G24440.1	1.4e-94	67.44	RING/U-box superfamily protein	[more]
AT1G13195.1	9.8e-85	60.82	RING/U-box superfamily protein	[more]
AT1G13195.2	7.0e-75	59.73	RING/U-box superfamily protein	[more]
AT5G01520.1	3.5e-58	47.60	RING/U-box superfamily protein	[more]
AT3G47160.1	4.0e-54	45.04	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 157..194 e-value: 8.3E-4 score: 28.7
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 155..195 e-value: 3.2E-7 score: 30.6
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 157..195 score: 11.722122
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 132..206 e-value: 5.3E-12 score: 47.0
None	No IPR available	PANTHER	PTHR15315:SF35	F21J9.10	coord: 5..253
None	No IPR available	PANTHER	PTHR15315	RING FINGER PROTEIN 41, 151	coord: 5..253
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 148..200
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 172..181

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg14288-RA	Carg14288-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0061630	ubiquitin protein ligase activity