Carg14276 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg14276
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionTLC domain-containing protein At5g14285-like
LocationCarg_Chr04: 10597521 .. 10598258 (-)
RNA-Seq ExpressionCarg14276
SyntenyCarg14276
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCCGAGAGCCCATCATCATTGGCCTTGTTGTTGTTCTTCTTCTTCATGTTTCTATTTGTATATGTATTCGCTTACTTGGTTGTGCTCCAGAACTGGGGGCCCAAGCACAGGCTAGAGGCCTCAAGCTGCTTCATATCACTCGCCCATGGCAGTCCCGTCGTCATCATGGCCATCATTGCAATTCTCCAAGCTCCAAACGTGGCTGATTTCGCCGCTCTCAATACCAAATACCAGGGCCTTGTCCTCGAGTACAGCATGGCTTATTTCTTGATGGATCTTCTTCACTACATACTGTTTTATCCACGAGATTTCGTCTTTATATGTCATCATTTGGCAGTGCTTTACGTGTTCGCTACATGCCATTACTTGGTTCGTCGTGGTGCTCTGCCCATTCTGGTGCTTTTGGTGCTTGCGGAGTTCAGCAGTGGGTGCCAGAATGTTTGGACCCTAGCGGGTTACAGAAGGGCTGATGTGCCCGCTGCCGCTAAGTTTCAGGACTTCGTGTCTCCATATTTCTTCACCTTTTACAGCATTCTCAGAGGGGGCTTCGCGCCAGTCTTTCTGCATAAGATGGGAGAATTTTATGTCAGCAGTGCAGCAGAAAATTTGATTCCTAAGTGGGCTTGGATTTCATGGATGGGTGTAATTGGAACTGCCATTTTAGTTAGCATATTGTGGGTCGGAAATCATTGGGTTCTCTGGTTTCGACGTACAAAGCATGGGAAAGCAGTGTGA

mRNA sequence

ATGCCCGAGAGCCCATCATCATTGGCCTTGTTGTTGTTCTTCTTCTTCATGTTTCTATTTGTATATGTATTCGCTTACTTGGTTGTGCTCCAGAACTGGGGGCCCAAGCACAGGCTAGAGGCCTCAAGCTGCTTCATATCACTCGCCCATGGCAGTCCCGTCGTCATCATGGCCATCATTGCAATTCTCCAAGCTCCAAACGTGGCTGATTTCGCCGCTCTCAATACCAAATACCAGGGCCTTGTCCTCGAGTACAGCATGGCTTATTTCTTGATGGATCTTCTTCACTACATACTGTTTTATCCACGAGATTTCGTCTTTATATGTCATCATTTGGCAGTGCTTTACGTGTTCGCTACATGCCATTACTTGGTTCGTCGTGGTGCTCTGCCCATTCTGGTGCTTTTGGTGCTTGCGGAGTTCAGCAGTGGGTGCCAGAATGTTTGGACCCTAGCGGGTTACAGAAGGGCTGATGTGCCCGCTGCCGCTAAGTTTCAGGACTTCGTGTCTCCATATTTCTTCACCTTTTACAGCATTCTCAGAGGGGGCTTCGCGCCAGTCTTTCTGCATAAGATGGGAGAATTTTATGTCAGCAGTGCAGCAGAAAATTTGATTCCTAAGTGGGCTTGGATTTCATGGATGGGTGTAATTGGAACTGCCATTTTAGTTAGCATATTGTGGGTCGGAAATCATTGGGTTCTCTGGTTTCGACGTACAAAGCATGGGAAAGCAGTGTGA

Coding sequence (CDS)

ATGCCCGAGAGCCCATCATCATTGGCCTTGTTGTTGTTCTTCTTCTTCATGTTTCTATTTGTATATGTATTCGCTTACTTGGTTGTGCTCCAGAACTGGGGGCCCAAGCACAGGCTAGAGGCCTCAAGCTGCTTCATATCACTCGCCCATGGCAGTCCCGTCGTCATCATGGCCATCATTGCAATTCTCCAAGCTCCAAACGTGGCTGATTTCGCCGCTCTCAATACCAAATACCAGGGCCTTGTCCTCGAGTACAGCATGGCTTATTTCTTGATGGATCTTCTTCACTACATACTGTTTTATCCACGAGATTTCGTCTTTATATGTCATCATTTGGCAGTGCTTTACGTGTTCGCTACATGCCATTACTTGGTTCGTCGTGGTGCTCTGCCCATTCTGGTGCTTTTGGTGCTTGCGGAGTTCAGCAGTGGGTGCCAGAATGTTTGGACCCTAGCGGGTTACAGAAGGGCTGATGTGCCCGCTGCCGCTAAGTTTCAGGACTTCGTGTCTCCATATTTCTTCACCTTTTACAGCATTCTCAGAGGGGGCTTCGCGCCAGTCTTTCTGCATAAGATGGGAGAATTTTATGTCAGCAGTGCAGCAGAAAATTTGATTCCTAAGTGGGCTTGGATTTCATGGATGGGTGTAATTGGAACTGCCATTTTAGTTAGCATATTGTGGGTCGGAAATCATTGGGTTCTCTGGTTTCGACGTACAAAGCATGGGAAAGCAGTGTGA

Protein sequence

MPESPSSLALLLFFFFMFLFVYVFAYLVVLQNWGPKHRLEASSCFISLAHGSPVVIMAIIAILQAPNVADFAALNTKYQGLVLEYSMAYFLMDLLHYILFYPRDFVFICHHLAVLYVFATCHYLVRRGALPILVLLVLAEFSSGCQNVWTLAGYRRADVPAAAKFQDFVSPYFFTFYSILRGGFAPVFLHKMGEFYVSSAAENLIPKWAWISWMGVIGTAILVSILWVGNHWVLWFRRTKHGKAV
Homology
BLAST of Carg14276 vs. NCBI nr
Match: KAG6601580.1 (TLC domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032345.1 TLC domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 489.6 bits (1259), Expect = 1.6e-134
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0

Query: 1   MPESPSSLALLLFFFFMFLFVYVFAYLVVLQNWGPKHRLEASSCFISLAHGSPVVIMAII 60
           MPESPSSLALLLFFFFMFLFVYVFAYLVVLQNWGPKHRLEASSCFISLAHGSPVVIMAII
Sbjct: 1   MPESPSSLALLLFFFFMFLFVYVFAYLVVLQNWGPKHRLEASSCFISLAHGSPVVIMAII 60

Query: 61  AILQAPNVADFAALNTKYQGLVLEYSMAYFLMDLLHYILFYPRDFVFICHHLAVLYVFAT 120
           AILQAPNVADFAALNTKYQGLVLEYSMAYFLMDLLHYILFYPRDFVFICHHLAVLYVFAT
Sbjct: 61  AILQAPNVADFAALNTKYQGLVLEYSMAYFLMDLLHYILFYPRDFVFICHHLAVLYVFAT 120

Query: 121 CHYLVRRGALPILVLLVLAEFSSGCQNVWTLAGYRRADVPAAAKFQDFVSPYFFTFYSIL 180
           CHYLVRRGALPILVLLVLAEFSSGCQNVWTLAGYRRADVPAAAKFQDFVSPYFFTFYSIL
Sbjct: 121 CHYLVRRGALPILVLLVLAEFSSGCQNVWTLAGYRRADVPAAAKFQDFVSPYFFTFYSIL 180

Query: 181 RGGFAPVFLHKMGEFYVSSAAENLIPKWAWISWMGVIGTAILVSILWVGNHWVLWFRRTK 240
           RGGFAPVFLHKMGEFYVSSAAENLIPKWAWISWMGVIGTAILVSILWVGNHWVLWFRRTK
Sbjct: 181 RGGFAPVFLHKMGEFYVSSAAENLIPKWAWISWMGVIGTAILVSILWVGNHWVLWFRRTK 240

Query: 241 HGKAV 246
           HGKAV
Sbjct: 241 HGKAV 245

BLAST of Carg14276 vs. NCBI nr
Match: XP_022956623.1 (TLC domain-containing protein At5g14285-like [Cucurbita moschata])

HSP 1 Score: 479.6 bits (1233), Expect = 1.7e-131
Identity = 239/245 (97.55%), Postives = 241/245 (98.37%), Query Frame = 0

Query: 1   MPESPSSLALLLFFFFMFLFVYVFAYLVVLQNWGPKHRLEASSCFISLAHGSPVVIMAII 60
           MPESPSSLALL FFFFMFLFVYVFAYLVVLQNWGPKHRLEASSCFISLAHG PVVIMAII
Sbjct: 5   MPESPSSLALLFFFFFMFLFVYVFAYLVVLQNWGPKHRLEASSCFISLAHGCPVVIMAII 64

Query: 61  AILQAPNVADFAALNTKYQGLVLEYSMAYFLMDLLHYILFYPRDFVFICHHLAVLYVFAT 120
           AILQAPN+ADFAALNTKYQGLVLEYSMAYFLMDLLH+ILFYPRDFVFICHHLAVLYVFAT
Sbjct: 65  AILQAPNMADFAALNTKYQGLVLEYSMAYFLMDLLHFILFYPRDFVFICHHLAVLYVFAT 124

Query: 121 CHYLVRRGALPILVLLVLAEFSSGCQNVWTLAGYRRADVPAAAKFQDFVSPYFFTFYSIL 180
           CHYLV RGALPILVLLVLAEFSSGCQNVWTLAGYRRADVPAAAKFQDFVSPYFFTFYSIL
Sbjct: 125 CHYLVSRGALPILVLLVLAEFSSGCQNVWTLAGYRRADVPAAAKFQDFVSPYFFTFYSIL 184

Query: 181 RGGFAPVFLHKMGEFYVSSAAENLIPKWAWISWMGVIGTAILVSILWVGNHWVLWFRRTK 240
           RGGFAPVFLHKMGEFYVSSAAENLIPKWAWISWMGVIGTAI VSILWVGNHWVLWFRRTK
Sbjct: 185 RGGFAPVFLHKMGEFYVSSAAENLIPKWAWISWMGVIGTAIFVSILWVGNHWVLWFRRTK 244

Query: 241 HGKAV 246
           HGKAV
Sbjct: 245 HGKAV 249

BLAST of Carg14276 vs. NCBI nr
Match: XP_023554709.1 (TLC domain-containing protein At5g14285-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 475.3 bits (1222), Expect = 3.1e-130
Identity = 239/245 (97.55%), Postives = 242/245 (98.78%), Query Frame = 0

Query: 1   MPESPSSLALLLFFFFMFLFVYVFAYLVVLQNWGPKHRLEASSCFISLAHGSPVVIMAII 60
           MPE+ S LALLL FFFMFLFVYVFAYLVVLQNWGPKHR+EASSCFISLAHGSPVVIMAII
Sbjct: 5   MPENSSPLALLL-FFFMFLFVYVFAYLVVLQNWGPKHRIEASSCFISLAHGSPVVIMAII 64

Query: 61  AILQAPNVADFAALNTKYQGLVLEYSMAYFLMDLLHYILFYPRDFVFICHHLAVLYVFAT 120
           AILQAPN+ADFAALNTKYQGLVLEYSMAYFLMDLLHYILFYPRDFVFICHHLAVLYVFAT
Sbjct: 65  AILQAPNMADFAALNTKYQGLVLEYSMAYFLMDLLHYILFYPRDFVFICHHLAVLYVFAT 124

Query: 121 CHYLVRRGALPILVLLVLAEFSSGCQNVWTLAGYRRADVPAAAKFQDFVSPYFFTFYSIL 180
           CHYLVRRGALPILVLLVLAEFSSGCQNVWTLAGYRRADVPAAAKFQDFVSPYFFTFYSIL
Sbjct: 125 CHYLVRRGALPILVLLVLAEFSSGCQNVWTLAGYRRADVPAAAKFQDFVSPYFFTFYSIL 184

Query: 181 RGGFAPVFLHKMGEFYVSSAAENLIPKWAWISWMGVIGTAILVSILWVGNHWVLWFRRTK 240
           RGGFAPVFLHKMGEFYVSSAAENLIPKWAWISWMGVIGTAILVSILWVGNHWVLWFRRTK
Sbjct: 185 RGGFAPVFLHKMGEFYVSSAAENLIPKWAWISWMGVIGTAILVSILWVGNHWVLWFRRTK 244

Query: 241 HGKAV 246
           HGKAV
Sbjct: 245 HGKAV 248

BLAST of Carg14276 vs. NCBI nr
Match: XP_022998555.1 (TLC domain-containing protein At5g14285-like [Cucurbita maxima])

HSP 1 Score: 472.6 bits (1215), Expect = 2.0e-129
Identity = 236/245 (96.33%), Postives = 240/245 (97.96%), Query Frame = 0

Query: 1   MPESPSSLALLLFFFFMFLFVYVFAYLVVLQNWGPKHRLEASSCFISLAHGSPVVIMAII 60
           MPESPSSLAL  FFFFMFLFVYVFAYLVVLQNWGPKHRLEASSCFISLAHGSPVVIMAII
Sbjct: 5   MPESPSSLALFFFFFFMFLFVYVFAYLVVLQNWGPKHRLEASSCFISLAHGSPVVIMAII 64

Query: 61  AILQAPNVADFAALNTKYQGLVLEYSMAYFLMDLLHYILFYPRDFVFICHHLAVLYVFAT 120
           AILQAPN+ADFAALNTKYQGLVL+YSMAYFLMDLLH+ILFYPRDFVFICHHLAVLYVFAT
Sbjct: 65  AILQAPNMADFAALNTKYQGLVLQYSMAYFLMDLLHFILFYPRDFVFICHHLAVLYVFAT 124

Query: 121 CHYLVRRGALPILVLLVLAEFSSGCQNVWTLAGYRRADVPAAAKFQDFVSPYFFTFYSIL 180
           C+YLVRRGALPILVLLVLAEFSSGCQNVWTLAGYRRADVPAAAKFQDFVSPYFFTFYSIL
Sbjct: 125 CNYLVRRGALPILVLLVLAEFSSGCQNVWTLAGYRRADVPAAAKFQDFVSPYFFTFYSIL 184

Query: 181 RGGFAPVFLHKMGEFYVSSAAENLIPKWAWISWMGVIGTAILVSILWVGNHWVLWFRRTK 240
           RGGFAPVFLHKMGEFYVS AAENLIPKWAWISWMGVIGTAILVSILWVGNHWVLWFR  K
Sbjct: 185 RGGFAPVFLHKMGEFYVSRAAENLIPKWAWISWMGVIGTAILVSILWVGNHWVLWFRCKK 244

Query: 241 HGKAV 246
           HGKAV
Sbjct: 245 HGKAV 249

BLAST of Carg14276 vs. NCBI nr
Match: XP_022151969.1 (TLC domain-containing protein At5g14285-like [Momordica charantia])

HSP 1 Score: 382.1 bits (980), Expect = 3.6e-102
Identity = 182/236 (77.12%), Postives = 205/236 (86.86%), Query Frame = 0

Query: 10  LLLFFFFMFLFVYVFAYLVVLQNWGPKHRLEASSCFISLAHGSPVVIMAIIAILQAPNVA 69
           LL  FF MFLF+Y+F YLVV ++WGPKHRLEA+S F+SLAHG+P   MAI+A+L APN  
Sbjct: 12  LLAVFFLMFLFMYLFGYLVVFRSWGPKHRLEAASSFMSLAHGTPAAAMAILAVLHAPNAG 71

Query: 70  DFAALNTKYQGLVLEYSMAYFLMDLLHYILFYPRDFVFICHHLAVLYVFATCHYLVRRGA 129
           DFAALNT +QGLVLEYS+AYFL+DLLHY+LFYPRD VFICHHLAV+YVF TCHYLV  GA
Sbjct: 72  DFAALNTNFQGLVLEYSIAYFLVDLLHYVLFYPRDLVFICHHLAVIYVFVTCHYLVHHGA 131

Query: 130 LPILVLLVLAEFSSGCQNVWTLAGYRRADVPAAAKFQDFVSPYFFTFYSILRGGFAPVFL 189
           +PILVLLVLAE +SGC N W LAGYRRAD PAAAKFQD +SPYF+T+YS LRGG APVFL
Sbjct: 132 VPILVLLVLAELTSGCHNAWGLAGYRRADAPAAAKFQDALSPYFYTYYSTLRGGLAPVFL 191

Query: 190 HKMGEFYVSSAAENLIPKWAWISWMGVIGTAILVSILWVGNHWVLWFRRTKHGKAV 246
           HKMG FYVS AAEN+IPKWAWISWMGVI TAILVSILW+GNHW LWFR+ +HGK V
Sbjct: 192 HKMGIFYVSGAAENVIPKWAWISWMGVIATAILVSILWIGNHWALWFRQRRHGKVV 247

BLAST of Carg14276 vs. ExPASy Swiss-Prot
Match: Q8GYK7 (TLC domain-containing protein At5g14285 OS=Arabidopsis thaliana OX=3702 GN=At5g14285 PE=2 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 1.4e-56
Identity = 121/239 (50.63%), Postives = 153/239 (64.02%), Query Frame = 0

Query: 7   SLALLLFFFFMFLFVYVFAYLVVLQNWGPKHRLEASSCFISLAHGSPVVIMAIIAILQAP 66
           S+  L  FF MFL +Y+ AY +V +NW P+ R EASSC IS+ HGSP V +A  A+  + 
Sbjct: 9   SIPDLPIFFSMFLTIYLIAYFIVFRNWKPQIRPEASSCLISIFHGSPAVFLATRAVFSS- 68

Query: 67  NVADFAALNTKYQGLVLEYSMAYFLMDLLHYILFYPRDFVFICHHLAVLYVFATCHYLVR 126
           +   FA+ NT  Q  VL++S+AYFL DL HYI+F P D +FI HH+A L+VF TC +LV 
Sbjct: 69  SERSFASANTAAQNTVLDFSVAYFLTDLFHYIVFNPNDVLFIGHHVATLFVFLTCRFLVF 128

Query: 127 RGALPILVLLVLAEFSSGCQNVWTLAGYRRADVPA--AAKFQDFVSPYFFTFYSILRGGF 186
            GA  IL LL+LAE +S CQN WTLAG R+ D  +  A K  D +SP F+ FYSI+RG  
Sbjct: 129 HGACAILGLLILAEVTSACQNAWTLAGARKNDPESRLAVKVYDLLSPPFYAFYSIVRGVL 188

Query: 187 APVFLHKMGEFYVSSAAENLIPKWAWISWMGVIGTAILVSILWVGNHWVLWFRRTKHGK 244
            P+F  KM  FY    A  +IP W WISW  V+G AI VSILW+ N W+  F   K  K
Sbjct: 189 GPLFFGKMVAFYARGGAHGVIPNWLWISWAIVVGIAITVSILWIWNLWIELFSERKANK 246

BLAST of Carg14276 vs. ExPASy TrEMBL
Match: A0A6J1GXG9 (TLC domain-containing protein At5g14285-like OS=Cucurbita moschata OX=3662 GN=LOC111458300 PE=4 SV=1)

HSP 1 Score: 479.6 bits (1233), Expect = 8.0e-132
Identity = 239/245 (97.55%), Postives = 241/245 (98.37%), Query Frame = 0

Query: 1   MPESPSSLALLLFFFFMFLFVYVFAYLVVLQNWGPKHRLEASSCFISLAHGSPVVIMAII 60
           MPESPSSLALL FFFFMFLFVYVFAYLVVLQNWGPKHRLEASSCFISLAHG PVVIMAII
Sbjct: 5   MPESPSSLALLFFFFFMFLFVYVFAYLVVLQNWGPKHRLEASSCFISLAHGCPVVIMAII 64

Query: 61  AILQAPNVADFAALNTKYQGLVLEYSMAYFLMDLLHYILFYPRDFVFICHHLAVLYVFAT 120
           AILQAPN+ADFAALNTKYQGLVLEYSMAYFLMDLLH+ILFYPRDFVFICHHLAVLYVFAT
Sbjct: 65  AILQAPNMADFAALNTKYQGLVLEYSMAYFLMDLLHFILFYPRDFVFICHHLAVLYVFAT 124

Query: 121 CHYLVRRGALPILVLLVLAEFSSGCQNVWTLAGYRRADVPAAAKFQDFVSPYFFTFYSIL 180
           CHYLV RGALPILVLLVLAEFSSGCQNVWTLAGYRRADVPAAAKFQDFVSPYFFTFYSIL
Sbjct: 125 CHYLVSRGALPILVLLVLAEFSSGCQNVWTLAGYRRADVPAAAKFQDFVSPYFFTFYSIL 184

Query: 181 RGGFAPVFLHKMGEFYVSSAAENLIPKWAWISWMGVIGTAILVSILWVGNHWVLWFRRTK 240
           RGGFAPVFLHKMGEFYVSSAAENLIPKWAWISWMGVIGTAI VSILWVGNHWVLWFRRTK
Sbjct: 185 RGGFAPVFLHKMGEFYVSSAAENLIPKWAWISWMGVIGTAIFVSILWVGNHWVLWFRRTK 244

Query: 241 HGKAV 246
           HGKAV
Sbjct: 245 HGKAV 249

BLAST of Carg14276 vs. ExPASy TrEMBL
Match: A0A6J1KCU9 (TLC domain-containing protein At5g14285-like OS=Cucurbita maxima OX=3661 GN=LOC111493150 PE=4 SV=1)

HSP 1 Score: 472.6 bits (1215), Expect = 9.8e-130
Identity = 236/245 (96.33%), Postives = 240/245 (97.96%), Query Frame = 0

Query: 1   MPESPSSLALLLFFFFMFLFVYVFAYLVVLQNWGPKHRLEASSCFISLAHGSPVVIMAII 60
           MPESPSSLAL  FFFFMFLFVYVFAYLVVLQNWGPKHRLEASSCFISLAHGSPVVIMAII
Sbjct: 5   MPESPSSLALFFFFFFMFLFVYVFAYLVVLQNWGPKHRLEASSCFISLAHGSPVVIMAII 64

Query: 61  AILQAPNVADFAALNTKYQGLVLEYSMAYFLMDLLHYILFYPRDFVFICHHLAVLYVFAT 120
           AILQAPN+ADFAALNTKYQGLVL+YSMAYFLMDLLH+ILFYPRDFVFICHHLAVLYVFAT
Sbjct: 65  AILQAPNMADFAALNTKYQGLVLQYSMAYFLMDLLHFILFYPRDFVFICHHLAVLYVFAT 124

Query: 121 CHYLVRRGALPILVLLVLAEFSSGCQNVWTLAGYRRADVPAAAKFQDFVSPYFFTFYSIL 180
           C+YLVRRGALPILVLLVLAEFSSGCQNVWTLAGYRRADVPAAAKFQDFVSPYFFTFYSIL
Sbjct: 125 CNYLVRRGALPILVLLVLAEFSSGCQNVWTLAGYRRADVPAAAKFQDFVSPYFFTFYSIL 184

Query: 181 RGGFAPVFLHKMGEFYVSSAAENLIPKWAWISWMGVIGTAILVSILWVGNHWVLWFRRTK 240
           RGGFAPVFLHKMGEFYVS AAENLIPKWAWISWMGVIGTAILVSILWVGNHWVLWFR  K
Sbjct: 185 RGGFAPVFLHKMGEFYVSRAAENLIPKWAWISWMGVIGTAILVSILWVGNHWVLWFRCKK 244

Query: 241 HGKAV 246
           HGKAV
Sbjct: 245 HGKAV 249

BLAST of Carg14276 vs. ExPASy TrEMBL
Match: A0A6J1DEM0 (TLC domain-containing protein At5g14285-like OS=Momordica charantia OX=3673 GN=LOC111019804 PE=4 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 1.7e-102
Identity = 182/236 (77.12%), Postives = 205/236 (86.86%), Query Frame = 0

Query: 10  LLLFFFFMFLFVYVFAYLVVLQNWGPKHRLEASSCFISLAHGSPVVIMAIIAILQAPNVA 69
           LL  FF MFLF+Y+F YLVV ++WGPKHRLEA+S F+SLAHG+P   MAI+A+L APN  
Sbjct: 12  LLAVFFLMFLFMYLFGYLVVFRSWGPKHRLEAASSFMSLAHGTPAAAMAILAVLHAPNAG 71

Query: 70  DFAALNTKYQGLVLEYSMAYFLMDLLHYILFYPRDFVFICHHLAVLYVFATCHYLVRRGA 129
           DFAALNT +QGLVLEYS+AYFL+DLLHY+LFYPRD VFICHHLAV+YVF TCHYLV  GA
Sbjct: 72  DFAALNTNFQGLVLEYSIAYFLVDLLHYVLFYPRDLVFICHHLAVIYVFVTCHYLVHHGA 131

Query: 130 LPILVLLVLAEFSSGCQNVWTLAGYRRADVPAAAKFQDFVSPYFFTFYSILRGGFAPVFL 189
           +PILVLLVLAE +SGC N W LAGYRRAD PAAAKFQD +SPYF+T+YS LRGG APVFL
Sbjct: 132 VPILVLLVLAELTSGCHNAWGLAGYRRADAPAAAKFQDALSPYFYTYYSTLRGGLAPVFL 191

Query: 190 HKMGEFYVSSAAENLIPKWAWISWMGVIGTAILVSILWVGNHWVLWFRRTKHGKAV 246
           HKMG FYVS AAEN+IPKWAWISWMGVI TAILVSILW+GNHW LWFR+ +HGK V
Sbjct: 192 HKMGIFYVSGAAENVIPKWAWISWMGVIATAILVSILWIGNHWALWFRQRRHGKVV 247

BLAST of Carg14276 vs. ExPASy TrEMBL
Match: A0A0A0KVB7 (TLC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G590130 PE=4 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 2.1e-87
Identity = 169/236 (71.61%), Postives = 194/236 (82.20%), Query Frame = 0

Query: 11  LLFFFFMFLFVYVFAYLVVLQNWGPKHRLEASSCFISLAHGSPVVIMAIIAILQAPNVAD 70
           L  FF MFLFVY FAY V+L+NWGPKHRLEASSCFISLAHG+PVVI+A IAILQ+PN  D
Sbjct: 5   LPLFFAMFLFVYTFAYSVLLRNWGPKHRLEASSCFISLAHGTPVVILAAIAILQSPNSTD 64

Query: 71  FAALNTKYQGLVLEYSMAYFLMDLLHYILFYPRDFVFICHHLAVLYVFATCHYLVRRGAL 130
           FAA NTK+Q LVLEYS+AYF +DLLH +LF P DFVFI HHLAVLYVF TC+Y+V  GA+
Sbjct: 65  FAAPNTKFQALVLEYSIAYFSLDLLHCLLFSPNDFVFIFHHLAVLYVFVTCNYIVGCGAV 124

Query: 131 PILVLLVLAEFSSGCQNVWTLAGYRRADVPAAAKFQDFVSPYFFTFYSILRGGFAPVFLH 190
           PIL LLV+AE SSGCQN WTLAGYRR ++ AAAKF++FV+PYF TFYS+LR G APV + 
Sbjct: 125 PILGLLVVAELSSGCQNAWTLAGYRRTEMVAAAKFEEFVAPYFLTFYSVLRVGLAPVVVC 184

Query: 191 KMGEFYVSS--AAENLIPKWAWISWMGVIGTAILVSILWVGNHWVLWFRRTKHGKA 245
           KMGEFYV S   + NLIP WAWISWM VIG AI  S+LWVGNHW+LWF R  + K+
Sbjct: 185 KMGEFYVGSLGMSGNLIPTWAWISWMCVIGLAIFGSVLWVGNHWLLWFHRITNTKS 240

BLAST of Carg14276 vs. ExPASy TrEMBL
Match: A0A5A7SSM3 (TLC domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002050 PE=4 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 2.7e-87
Identity = 168/235 (71.49%), Postives = 194/235 (82.55%), Query Frame = 0

Query: 11  LLFFFFMFLFVYVFAYLVVLQNWGPKHRLEASSCFISLAHGSPVVIMAIIAILQAPNVAD 70
           L  FF MFLFVY FAY V+L+NWGPKHRLEASSCFISLAHG+PVVI+A IAILQ+PN  D
Sbjct: 5   LPLFFSMFLFVYTFAYSVLLRNWGPKHRLEASSCFISLAHGTPVVILATIAILQSPNPTD 64

Query: 71  FAALNTKYQGLVLEYSMAYFLMDLLHYILFYPRDFVFICHHLAVLYVFATCHYLVRRGAL 130
           FAA NTK+Q LVLEYS+AYF +DLLH + F P DFVFI HHLAVLYVF TC+Y+V  GA+
Sbjct: 65  FAAPNTKFQALVLEYSIAYFSLDLLHCVSFSPNDFVFIFHHLAVLYVFVTCNYIVGCGAV 124

Query: 131 PILVLLVLAEFSSGCQNVWTLAGYRRADVPAAAKFQDFVSPYFFTFYSILRGGFAPVFLH 190
           PIL LLV+AE SSGCQN WTLAGYRR ++ AAAKF++FV+PYF TFYS+LR G APV + 
Sbjct: 125 PILGLLVVAELSSGCQNAWTLAGYRRTEIVAAAKFEEFVTPYFLTFYSVLRVGLAPVVVC 184

Query: 191 KMGEFYVSS--AAENLIPKWAWISWMGVIGTAILVSILWVGNHWVLWFRRTKHGK 244
           KMGEFYV S   + NLIP WAWISW+ VIG AI  S+LWVGNHW+LWFR T++ K
Sbjct: 185 KMGEFYVGSLVMSGNLIPTWAWISWLCVIGMAIFGSVLWVGNHWLLWFRPTQNRK 239

BLAST of Carg14276 vs. TAIR 10
Match: AT3G25950.1 (TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein )

HSP 1 Score: 232.3 bits (591), Expect = 4.3e-61
Identity = 123/243 (50.62%), Postives = 164/243 (67.49%), Query Frame = 0

Query: 4   SPSS-LALLLFFFFMFLFVYVFAYLVVLQNWGPKHRLEASSCFISLAHGSPVVIMAIIAI 63
           +PSS LA    F  +FL VY   Y +V + W     L A SC +SL HG+P VIMA  A+
Sbjct: 7   NPSSFLATFPSFLLLFLAVYTIGYFLVFRTWKQSSHLGA-SCLMSLFHGTPAVIMASHAL 66

Query: 64  LQAP--NVADFAALNTKYQGLVLEYSMAYFLMDLLHYILFYPRDFVFICHHLAVLYVFAT 123
           L  P  +V  FA+ NT  +  VL++SMAYF +DLLHY++F P DF+FI HH+A LYVFAT
Sbjct: 67  LTTPRADVHSFASPNTAVESNVLDFSMAYFTVDLLHYLIFLPNDFIFILHHIATLYVFAT 126

Query: 124 CHYLVRRGALPILVLLVLAEFSSGCQNVWTLAGYRRADVPAAAKFQDFVSPYFFTFYSIL 183
           C + V  GA  +L+LL+LAE +S CQNVWT+ GYR+ DV  A + ++ +SP F+ FY+++
Sbjct: 127 CRFAVGHGAHGLLLLLILAEATSACQNVWTITGYRKNDVALARRVRELLSPPFYLFYTVV 186

Query: 184 RGGFAPVFLHKMGEFYVSSAAENLIPKWAWISWMGVIGTAILVSILWVGNHWVLWFRRTK 243
           RG   PV L+ M  FY S AA+ ++P+WAW+SW+ VIG AILVSILWV  +W+ WFR   
Sbjct: 187 RGLAGPVVLYDMATFYGSGAADGVVPRWAWLSWLVVIGFAILVSILWVLRNWLDWFRENN 246

BLAST of Carg14276 vs. TAIR 10
Match: AT5G14280.1 (DNA-binding storekeeper protein-related )

HSP 1 Score: 221.1 bits (562), Expect = 9.9e-58
Identity = 121/239 (50.63%), Postives = 153/239 (64.02%), Query Frame = 0

Query: 7   SLALLLFFFFMFLFVYVFAYLVVLQNWGPKHRLEASSCFISLAHGSPVVIMAIIAILQAP 66
           S+  L  FF MFL +Y+ AY +V +NW P+ R EASSC IS+ HGSP V +A  A+  + 
Sbjct: 327 SIPDLPIFFSMFLTIYLIAYFIVFRNWKPQIRPEASSCLISIFHGSPAVFLATRAVFSS- 386

Query: 67  NVADFAALNTKYQGLVLEYSMAYFLMDLLHYILFYPRDFVFICHHLAVLYVFATCHYLVR 126
           +   FA+ NT  Q  VL++S+AYFL DL HYI+F P D +FI HH+A L+VF TC +LV 
Sbjct: 387 SERSFASANTAAQNTVLDFSVAYFLTDLFHYIVFNPNDVLFIGHHVATLFVFLTCRFLVF 446

Query: 127 RGALPILVLLVLAEFSSGCQNVWTLAGYRRADVPA--AAKFQDFVSPYFFTFYSILRGGF 186
            GA  IL LL+LAE +S CQN WTLAG R+ D  +  A K  D +SP F+ FYSI+RG  
Sbjct: 447 HGACAILGLLILAEVTSACQNAWTLAGARKNDPESRLAVKVYDLLSPPFYAFYSIVRGVL 506

Query: 187 APVFLHKMGEFYVSSAAENLIPKWAWISWMGVIGTAILVSILWVGNHWVLWFRRTKHGK 244
            P+F  KM  FY    A  +IP W WISW  V+G AI VSILW+ N W+  F   K  K
Sbjct: 507 GPLFFGKMVAFYARGGAHGVIPNWLWISWAIVVGIAITVSILWIWNLWIELFSERKANK 564

BLAST of Carg14276 vs. TAIR 10
Match: AT3G27270.1 (TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein )

HSP 1 Score: 201.1 bits (510), Expect = 1.1e-51
Identity = 110/230 (47.83%), Postives = 148/230 (64.35%), Query Frame = 0

Query: 11  LLFFFFMFLFVYVFAYLVVLQNWGPKHRLEASSCFISLAHGSPVVIMAIIAILQAPNVAD 70
           L  FF +F+FVY+  YL + + W P+ R  ASSC ISL HG   V++A  A+L  PN   
Sbjct: 10  LPLFFSIFIFVYLLGYLFIFKKWTPETRPLASSCLISLLHGVSAVVLATNALLSDPN-RG 69

Query: 71  FAALNTKYQGLVLEYSMAYFLMDLLHYILF---YPRDFVFICHHLAVLYVFATCHYLVRR 130
           F+++NT+ Q  +L++S AYFL DL+H  +F      D +F  HHLAVL+VF TC Y+V  
Sbjct: 70  FSSVNTQSQNSILDFSSAYFLADLVHLAVFPSPAGGDSLFAAHHLAVLFVFLTCRYMVAH 129

Query: 131 GALPILVLLVLAEFSSGCQNVWTLAGYRRADVPAAAKFQDFVSPYFFTFYSILRGGFAPV 190
           GA  +L LLV+AE +S CQN WTLA  R  D P A     FV+  F+  YS+ R   AP+
Sbjct: 130 GACALLALLVVAEATSACQNTWTLADARGKDAPLAVSLHRFVTVPFYASYSVCRCVLAPL 189

Query: 191 FLHKMGEFYVSSAAENLIPKWAWISWMGVIGTAILVSILWVGNHWVLWFR 238
            + KM  FYVS  A+++IP+W W+SW  VI TA+ VSILW+ N WVL+F+
Sbjct: 190 LIVKMTWFYVSGGADDVIPRWVWVSWTVVIVTAVTVSILWIWNLWVLFFQ 238

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG6601580.11.6e-134100.00TLC domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia] >... [more]
XP_022956623.11.7e-13197.55TLC domain-containing protein At5g14285-like [Cucurbita moschata][more]
XP_023554709.13.1e-13097.55TLC domain-containing protein At5g14285-like [Cucurbita pepo subsp. pepo][more]
XP_022998555.12.0e-12996.33TLC domain-containing protein At5g14285-like [Cucurbita maxima][more]
XP_022151969.13.6e-10277.12TLC domain-containing protein At5g14285-like [Momordica charantia][more]
Match NameE-valueIdentityDescription
Q8GYK71.4e-5650.63TLC domain-containing protein At5g14285 OS=Arabidopsis thaliana OX=3702 GN=At5g1... [more]
Match NameE-valueIdentityDescription
A0A6J1GXG98.0e-13297.55TLC domain-containing protein At5g14285-like OS=Cucurbita moschata OX=3662 GN=LO... [more]
A0A6J1KCU99.8e-13096.33TLC domain-containing protein At5g14285-like OS=Cucurbita maxima OX=3661 GN=LOC1... [more]
A0A6J1DEM01.7e-10277.12TLC domain-containing protein At5g14285-like OS=Momordica charantia OX=3673 GN=L... [more]
A0A0A0KVB72.1e-8771.61TLC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G590130 PE=4 SV... [more]
A0A5A7SSM32.7e-8771.49TLC domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... [more]
Match NameE-valueIdentityDescription
AT3G25950.14.3e-6150.62TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein [more]
AT5G14280.19.9e-5850.63DNA-binding storekeeper protein-related [more]
AT3G27270.11.1e-5147.83TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006634TRAM/LAG1/CLN8 homology domainSMARTSM00724lag1_27coord: 36..240
e-value: 5.4E-19
score: 79.1
IPR006634TRAM/LAG1/CLN8 homology domainPROSITEPS50922TLCcoord: 36..240
score: 9.302437
NoneNo IPR availablePANTHERPTHR31766:SF8TRAM, LAG1 AND CLN8 (TLC) LIPID-SENSING DOMAIN CONTAINING PROTEINcoord: 8..241
IPR040327TLC domain-containing protein At5g14285-likePANTHERPTHR31766GLABROUS1 ENHANCER-BINDING PROTEIN-LIKE 2coord: 8..241

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg14276-RACarg14276-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane