Carg14216 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg14216
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Transmembrane protein
Location	Carg_Chr04: 4399166 .. 4401434 (-)
RNA-Seq Expression	Carg14216
Synteny	Carg14216

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTGATGTTTGAAAGTTGTTATGAGGTCCACTGTAAGCATCTGAGCGACCAAAAATCTCTATCGATGTTTCCGATGCTTCTACCCATCTTCATTCCAGAGAGGAACGACATATTCAACACAAATTCCCATCCCCATTTCTTCACAAATGTCATTGTCTTCTCAAAATCTCTTCAGATGTTCGAACCGTTTGAAGTTTTGTAGCTTCACTAACTCCCTTCCCAGATGCAACACTTCTTTCTCTCTCCCGATTGCATCTCGATTCCTCACAAACCTATATCAATTCCACGTTCATACGCATAAGCTACAGAACCCTAATAATTTAAGCTTCTTACGGAGTTACTGTCATTATGGCATTGGAGTTTTTGAATCCGAAGACATTGAGCAGAGTGACGACAGAGGAGGTGATTTCAATTTAGAGTCGGTTCTTTTGTTCTCTGAATTGTTTTCTCTCTTTGCTTCGGCTGTTTTCTTGGTTGGGTTTGTTGTGAATTTTGTGGGTTCGAGTTCGAAGAAGGCGCTTTGGGTGTTGATAGGAGATAGGGGTTTGGTGTGGGGGTTTCCTTTACTAGTGGCTACGGTTGTTCTTAATACGTGGATTCGAAGGCGGCAGTGGAGACGAGTATGTGGGGAAAAAGCGAGCGGTGGGTTGAAGGTGAATTTGCTGGATAGGATTGAGAAATTAGAGGAGGATTTAAGGAGCTCAACGACTGTGATTCGGGCCTTGTCTAGAAAGCTTGAGAAATTGGGCATAAGGTTTTTGGTCACACGAAAAACTGTGAGGGATTCAATTGCTGAGGTATTCTTATCTACTTTCTTTTTTTCGCTTGTGCTCTTTATTGGTAATCATATCATGTTTCTTTGATGGATAATAACTGGTCTTCTGCATTTTTAATCATGCTGAGTTCCTGTCGATTTAGTATACTTTGAGAGATTCAGTACAGATTCAAGCATTGTGGTGAGTTAACAGTATCAAGAATGAGAGATGGAGATTAATCTATAAGCTCATCATCTCATTGTCGAAAATTGAACGTGTTCTAATTCTACGTACATTATACATGTACATGATCATATATTTAATCAAGTGTTCGTATATATAGTTCTTTAAGCTGGATTAATTGTGGGTACATATATATGGATTCATAAGATGGAATGTATGGCATAGATGTTTTCATTGCGACCCTGTAAGAAATAGGATGTCTTTGGTGTGTTTAAAACAAATGCGTGGAGAGAAGAAAAGAAAGAGAGCTTGAGAGAAAGTGATGAACTAAATTTGATTCGTTGAAGAATTTTGATATAATTGACTTCGTTTCTTCTCAAGTAAATCTTATTTGATTACTTTTTCAGCGTATGTTTTGTTTTTCATTTGTTTTTATGTTTTTGTGTTTGCCCATTTTTGTTTAACAAAGAGTGAAATCTAACTTTGAACTAACGCTTTTCCACAAACCTCTAATTGTTTGTACGCTATTAAAGTCTGCAGCTTTAGCTCAAAGAAATTCTCAGGACACTCGAACTTTGGCAGTGCAAGAAGATGTTCTTGAAAAAGAACTCCTAGAAATTCAAAAGGTCTTACTGGCCATGCAGGTAAACGTTAAAATGATTGTTGAAGCCAGTAAACAAAACTCTGGTTATTTGAAATTTAATACCCTTTATATGCTGTATATTGGATGGATGTATGAGAGAGTATGAGGGTTGCTTGGTTTCAATGTGTTATATATACCGATTTCACAAGAAATAGGTGACTATAGACGATGAGGAATTCTTAATTTTTTCTTTGTACTAATTTAATTACGCAATCTGTATCAGAAGCAGATTATGAAGTTCGTCTTCCATGAAAATCAGGTTGATTTCGATAGGATTTCGACGTTGATGTGTCGATCATGTACTATCTTTTAAGAGTAGGGTTAAACGACGAAGTTGGTTAAAAACTGATTGTAACCTCTGCACTGAGTTCATTTGTAGGAGCAGCAGCAAAAGCAACTTGAGCTGATTATTGCAATAGGAGAAAAAGAGAAGCTGTTGAAAAGTAAACAGAGACATGATCAAGAACCAACAAGAACTCAAAGGCAGAATTCTGCCAATGAGGAGTCAAAAGAGCTGGAAGCTTATGGAATCTGAGCTAGGATCCTCATCAAAATGCCCCTCTCTATTATCATTGTAGGCAACAAAAATCTCACTGAATCGCGGCTCTTCACAACTAGTGGTTATGATCATATAGCTTTCACTCGGACGCAAGGATTCTAGGAGGAATTGCTTTTGTTTGTTTTTTTT

mRNA sequence

TCTGATGTTTGAAAGTTGTTATGAGGTCCACTGTAAGCATCTGAGCGACCAAAAATCTCTATCGATGTTTCCGATGCTTCTACCCATCTTCATTCCAGAGAGGAACGACATATTCAACACAAATTCCCATCCCCATTTCTTCACAAATGTCATTGTCTTCTCAAAATCTCTTCAGATGTTCGAACCGTTTGAAGTTTTGTAGCTTCACTAACTCCCTTCCCAGATGCAACACTTCTTTCTCTCTCCCGATTGCATCTCGATTCCTCACAAACCTATATCAATTCCACGTTCATACGCATAAGCTACAGAACCCTAATAATTTAAGCTTCTTACGGAGTTACTGTCATTATGGCATTGGAGTTTTTGAATCCGAAGACATTGAGCAGAGTGACGACAGAGGAGGTGATTTCAATTTAGAGTCGGTTCTTTTGTTCTCTGAATTGTTTTCTCTCTTTGCTTCGGCTGTTTTCTTGGTTGGGTTTGTTGTGAATTTTGTGGGTTCGAGTTCGAAGAAGGCGCTTTGGGTGTTGATAGGAGATAGGGGTTTGGTGTGGGGGTTTCCTTTACTAGTGGCTACGGTTGTTCTTAATACGTGGATTCGAAGGCGGCAGTGGAGACGAGTATGTGGGGAAAAAGCGAGCGGTGGGTTGAAGGTGAATTTGCTGGATAGGATTGAGAAATTAGAGGAGGATTTAAGGAGCTCAACGACTGTGATTCGGGCCTTGTCTAGAAAGCTTGAGAAATTGGGCATAAGGTTTTTGGTCACACGAAAAACTGTGAGGGATTCAATTGCTGAGTCTGCAGCTTTAGCTCAAAGAAATTCTCAGGACACTCGAACTTTGGCAGTGCAAGAAGATGTTCTTGAAAAAGAACTCCTAGAAATTCAAAAGGTCTTACTGGCCATGCAGGAGCAGCAGCAAAAGCAACTTGAGCTGATTATTGCAATAGGAGAAAAAGAGAAGCTGTTGAAAAGTAAACAGAGACATGATCAAGAACCAACAAGAACTCAAAGGCAGAATTCTGCCAATGAGGAGTCAAAAGAGCTGGAAGCTTATGGAATCTGAGCTAGGATCCTCATCAAAATGCCCCTCTCTATTATCATTGTAGGCAACAAAAATCTCACTGAATCGCGGCTCTTCACAACTAGTGGTTATGATCATATAGCTTTCACTCGGACGCAAGGATTCTAGGAGGAATTGCTTTTGTTTGTTTTTTTT

Coding sequence (CDS)

ATGTCATTGTCTTCTCAAAATCTCTTCAGATGTTCGAACCGTTTGAAGTTTTGTAGCTTCACTAACTCCCTTCCCAGATGCAACACTTCTTTCTCTCTCCCGATTGCATCTCGATTCCTCACAAACCTATATCAATTCCACGTTCATACGCATAAGCTACAGAACCCTAATAATTTAAGCTTCTTACGGAGTTACTGTCATTATGGCATTGGAGTTTTTGAATCCGAAGACATTGAGCAGAGTGACGACAGAGGAGGTGATTTCAATTTAGAGTCGGTTCTTTTGTTCTCTGAATTGTTTTCTCTCTTTGCTTCGGCTGTTTTCTTGGTTGGGTTTGTTGTGAATTTTGTGGGTTCGAGTTCGAAGAAGGCGCTTTGGGTGTTGATAGGAGATAGGGGTTTGGTGTGGGGGTTTCCTTTACTAGTGGCTACGGTTGTTCTTAATACGTGGATTCGAAGGCGGCAGTGGAGACGAGTATGTGGGGAAAAAGCGAGCGGTGGGTTGAAGGTGAATTTGCTGGATAGGATTGAGAAATTAGAGGAGGATTTAAGGAGCTCAACGACTGTGATTCGGGCCTTGTCTAGAAAGCTTGAGAAATTGGGCATAAGGTTTTTGGTCACACGAAAAACTGTGAGGGATTCAATTGCTGAGTCTGCAGCTTTAGCTCAAAGAAATTCTCAGGACACTCGAACTTTGGCAGTGCAAGAAGATGTTCTTGAAAAAGAACTCCTAGAAATTCAAAAGGTCTTACTGGCCATGCAGGAGCAGCAGCAAAAGCAACTTGAGCTGATTATTGCAATAGGAGAAAAAGAGAAGCTGTTGAAAAGTAAACAGAGACATGATCAAGAACCAACAAGAACTCAAAGGCAGAATTCTGCCAATGAGGAGTCAAAAGAGCTGGAAGCTTATGGAATCTGA

Protein sequence

MSLSSQNLFRCSNRLKFCSFTNSLPRCNTSFSLPIASRFLTNLYQFHVHTHKLQNPNNLSFLRSYCHYGIGVFESEDIEQSDDRGGDFNLESVLLFSELFSLFASAVFLVGFVVNFVGSSSKKALWVLIGDRGLVWGFPLLVATVVLNTWIRRRQWRRVCGEKASGGLKVNLLDRIEKLEEDLRSSTTVIRALSRKLEKLGIRFLVTRKTVRDSIAESAALAQRNSQDTRTLAVQEDVLEKELLEIQKVLLAMQEQQQKQLELIIAIGEKEKLLKSKQRHDQEPTRTQRQNSANEESKELEAYGI

Homology

[Close]

BLAST of Carg14216 vs. NCBI nr
Match: KAG7031283.1 (hypothetical protein SDJN02_05323 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 575.1 bits (1481), Expect = 3.6e-160
Identity = 305/305 (100.00%), Postives = 305/305 (100.00%), Query Frame = 0


Query: 1   MSLSSQNLFRCSNRLKFCSFTNSLPRCNTSFSLPIASRFLTNLYQFHVHTHKLQNPNNLS 60
           MSLSSQNLFRCSNRLKFCSFTNSLPRCNTSFSLPIASRFLTNLYQFHVHTHKLQNPNNLS
Sbjct: 1   MSLSSQNLFRCSNRLKFCSFTNSLPRCNTSFSLPIASRFLTNLYQFHVHTHKLQNPNNLS 60

Query: 61  FLRSYCHYGIGVFESEDIEQSDDRGGDFNLESVLLFSELFSLFASAVFLVGFVVNFVGSS 120
           FLRSYCHYGIGVFESEDIEQSDDRGGDFNLESVLLFSELFSLFASAVFLVGFVVNFVGSS
Sbjct: 61  FLRSYCHYGIGVFESEDIEQSDDRGGDFNLESVLLFSELFSLFASAVFLVGFVVNFVGSS 120

Query: 121 SKKALWVLIGDRGLVWGFPLLVATVVLNTWIRRRQWRRVCGEKASGGLKVNLLDRIEKLE 180
           SKKALWVLIGDRGLVWGFPLLVATVVLNTWIRRRQWRRVCGEKASGGLKVNLLDRIEKLE
Sbjct: 121 SKKALWVLIGDRGLVWGFPLLVATVVLNTWIRRRQWRRVCGEKASGGLKVNLLDRIEKLE 180

Query: 181 EDLRSSTTVIRALSRKLEKLGIRFLVTRKTVRDSIAESAALAQRNSQDTRTLAVQEDVLE 240
           EDLRSSTTVIRALSRKLEKLGIRFLVTRKTVRDSIAESAALAQRNSQDTRTLAVQEDVLE
Sbjct: 181 EDLRSSTTVIRALSRKLEKLGIRFLVTRKTVRDSIAESAALAQRNSQDTRTLAVQEDVLE 240

Query: 241 KELLEIQKVLLAMQEQQQKQLELIIAIGEKEKLLKSKQRHDQEPTRTQRQNSANEESKEL 300
           KELLEIQKVLLAMQEQQQKQLELIIAIGEKEKLLKSKQRHDQEPTRTQRQNSANEESKEL
Sbjct: 241 KELLEIQKVLLAMQEQQQKQLELIIAIGEKEKLLKSKQRHDQEPTRTQRQNSANEESKEL 300

Query: 301 EAYGI 306
           EAYGI
Sbjct: 301 EAYGI 305

[Close]

BLAST of Carg14216 vs. NCBI nr
Match: KAG6600645.1 (hypothetical protein SDJN03_05878, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 572.0 bits (1473), Expect = 3.1e-159
Identity = 304/305 (99.67%), Postives = 304/305 (99.67%), Query Frame = 0


Query: 1   MSLSSQNLFRCSNRLKFCSFTNSLPRCNTSFSLPIASRFLTNLYQFHVHTHKLQNPNNLS 60
           MSLSSQNLFRCSNRLKFCSFTNSLPRCNTSFSLPIASRFLTNLYQFHVHTHKLQNPNNLS
Sbjct: 1   MSLSSQNLFRCSNRLKFCSFTNSLPRCNTSFSLPIASRFLTNLYQFHVHTHKLQNPNNLS 60

Query: 61  FLRSYCHYGIGVFESEDIEQSDDRGGDFNLESVLLFSELFSLFASAVFLVGFVVNFVGSS 120
            LRSYCHYGIGVFESEDIEQSDDRGGDFNLESVLLFSELFSLFASAVFLVGFVVNFVGSS
Sbjct: 61  SLRSYCHYGIGVFESEDIEQSDDRGGDFNLESVLLFSELFSLFASAVFLVGFVVNFVGSS 120

Query: 121 SKKALWVLIGDRGLVWGFPLLVATVVLNTWIRRRQWRRVCGEKASGGLKVNLLDRIEKLE 180
           SKKALWVLIGDRGLVWGFPLLVATVVLNTWIRRRQWRRVCGEKASGGLKVNLLDRIEKLE
Sbjct: 121 SKKALWVLIGDRGLVWGFPLLVATVVLNTWIRRRQWRRVCGEKASGGLKVNLLDRIEKLE 180

Query: 181 EDLRSSTTVIRALSRKLEKLGIRFLVTRKTVRDSIAESAALAQRNSQDTRTLAVQEDVLE 240
           EDLRSSTTVIRALSRKLEKLGIRFLVTRKTVRDSIAESAALAQRNSQDTRTLAVQEDVLE
Sbjct: 181 EDLRSSTTVIRALSRKLEKLGIRFLVTRKTVRDSIAESAALAQRNSQDTRTLAVQEDVLE 240

Query: 241 KELLEIQKVLLAMQEQQQKQLELIIAIGEKEKLLKSKQRHDQEPTRTQRQNSANEESKEL 300
           KELLEIQKVLLAMQEQQQKQLELIIAIGEKEKLLKSKQRHDQEPTRTQRQNSANEESKEL
Sbjct: 241 KELLEIQKVLLAMQEQQQKQLELIIAIGEKEKLLKSKQRHDQEPTRTQRQNSANEESKEL 300

Query: 301 EAYGI 306
           EAYGI
Sbjct: 301 EAYGI 305

[Close]

BLAST of Carg14216 vs. NCBI nr
Match: XP_022941579.1 (uncharacterized protein LOC111446891 [Cucurbita moschata])

HSP 1 Score: 568.9 bits (1465), Expect = 2.6e-158
Identity = 303/305 (99.34%), Postives = 303/305 (99.34%), Query Frame = 0


Query: 1   MSLSSQNLFRCSNRLKFCSFTNSLPRCNTSFSLPIASRFLTNLYQFHVHTHKLQNPNNLS 60
           MSLSSQNLFRCSNRLKFCSFTNSLPRCNTSFSLPIASRFLTNLYQFHVHTHKLQNPNNLS
Sbjct: 1   MSLSSQNLFRCSNRLKFCSFTNSLPRCNTSFSLPIASRFLTNLYQFHVHTHKLQNPNNLS 60

Query: 61  FLRSYCHYGIGVFESEDIEQSDDRGGDFNLESVLLFSELFSLFASAVFLVGFVVNFVGSS 120
            LRSYCHYGIGV ESEDIEQSDDRGGDFNLESVLLFSELFSLFASAVFLVGFVVNFVGSS
Sbjct: 61  SLRSYCHYGIGVSESEDIEQSDDRGGDFNLESVLLFSELFSLFASAVFLVGFVVNFVGSS 120

Query: 121 SKKALWVLIGDRGLVWGFPLLVATVVLNTWIRRRQWRRVCGEKASGGLKVNLLDRIEKLE 180
           SKKALWVLIGDRGLVWGFPLLVATVVLNTWIRRRQWRRVCGEKASGGLKVNLLDRIEKLE
Sbjct: 121 SKKALWVLIGDRGLVWGFPLLVATVVLNTWIRRRQWRRVCGEKASGGLKVNLLDRIEKLE 180

Query: 181 EDLRSSTTVIRALSRKLEKLGIRFLVTRKTVRDSIAESAALAQRNSQDTRTLAVQEDVLE 240
           EDLRSSTTVIRALSRKLEKLGIRFLVTRKTVRDSIAESAALAQRNSQDTRTLAVQEDVLE
Sbjct: 181 EDLRSSTTVIRALSRKLEKLGIRFLVTRKTVRDSIAESAALAQRNSQDTRTLAVQEDVLE 240

Query: 241 KELLEIQKVLLAMQEQQQKQLELIIAIGEKEKLLKSKQRHDQEPTRTQRQNSANEESKEL 300
           KELLEIQKVLLAMQEQQQKQLELIIAIGEKEKLLKSKQRHDQEPTRTQRQNSANEESKEL
Sbjct: 241 KELLEIQKVLLAMQEQQQKQLELIIAIGEKEKLLKSKQRHDQEPTRTQRQNSANEESKEL 300

Query: 301 EAYGI 306
           EAYGI
Sbjct: 301 EAYGI 305

[Close]

BLAST of Carg14216 vs. NCBI nr
Match: XP_022981639.1 (uncharacterized protein LOC111480696 [Cucurbita maxima])

HSP 1 Score: 556.6 bits (1433), Expect = 1.3e-154
Identity = 297/305 (97.38%), Postives = 299/305 (98.03%), Query Frame = 0


Query: 1   MSLSSQNLFRCSNRLKFCSFTNSLPRCNTSFSLPIASRFLTNLYQFHVHTHKLQNPNNLS 60
           MSLSSQNLFRCSNRLKFCSFTNSLPRC+TS SLPIASRFLTNLYQFHVHTHKLQNPNNLS
Sbjct: 51  MSLSSQNLFRCSNRLKFCSFTNSLPRCSTSSSLPIASRFLTNLYQFHVHTHKLQNPNNLS 110

Query: 61  FLRSYCHYGIGVFESEDIEQSDDRGGDFNLESVLLFSELFSLFASAVFLVGFVVNFVGSS 120
            LRSYCHYGIGVFESEDIEQSDDRGGDFNLESVLLFSELFSLFASAVFLVGFVVNFVG  
Sbjct: 111 SLRSYCHYGIGVFESEDIEQSDDRGGDFNLESVLLFSELFSLFASAVFLVGFVVNFVGWC 170

Query: 121 SKKALWVLIGDRGLVWGFPLLVATVVLNTWIRRRQWRRVCGEKASGGLKVNLLDRIEKLE 180
           SKKALWVLIGDR LVWGFPLLVATVVLNTWIRRRQWRRVCGEKASGGLKVNLLDRIEKLE
Sbjct: 171 SKKALWVLIGDRRLVWGFPLLVATVVLNTWIRRRQWRRVCGEKASGGLKVNLLDRIEKLE 230

Query: 181 EDLRSSTTVIRALSRKLEKLGIRFLVTRKTVRDSIAESAALAQRNSQDTRTLAVQEDVLE 240
           EDLRSSTTVIR LSRKLEKLGIRFLVTRKTVRDSIAESAALAQRNS+DTRTLAVQEDVLE
Sbjct: 231 EDLRSSTTVIRVLSRKLEKLGIRFLVTRKTVRDSIAESAALAQRNSEDTRTLAVQEDVLE 290

Query: 241 KELLEIQKVLLAMQEQQQKQLELIIAIGEKEKLLKSKQRHDQEPTRTQRQNSANEESKEL 300
           KELLEIQKVLLAMQEQQQKQLELIIAIGEKEKLLKSKQRHDQEPTRTQRQNSANEESKEL
Sbjct: 291 KELLEIQKVLLAMQEQQQKQLELIIAIGEKEKLLKSKQRHDQEPTRTQRQNSANEESKEL 350

Query: 301 EAYGI 306
           EAYGI
Sbjct: 351 EAYGI 355

[Close]

BLAST of Carg14216 vs. NCBI nr
Match: XP_023516360.1 (uncharacterized protein LOC111780219 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 555.1 bits (1429), Expect = 3.9e-154
Identity = 296/305 (97.05%), Postives = 299/305 (98.03%), Query Frame = 0


Query: 1   MSLSSQNLFRCSNRLKFCSFTNSLPRCNTSFSLPIASRFLTNLYQFHVHTHKLQNPNNLS 60
           MSLSSQNLFRCSNRLKFCSFTNSLPR NTS SLPIASRFLTNL QFHVHTHKLQNPNNLS
Sbjct: 1   MSLSSQNLFRCSNRLKFCSFTNSLPRSNTSLSLPIASRFLTNLCQFHVHTHKLQNPNNLS 60

Query: 61  FLRSYCHYGIGVFESEDIEQSDDRGGDFNLESVLLFSELFSLFASAVFLVGFVVNFVGSS 120
            LRSYCHYGIGVFESEDIEQSDDRGGDFNLESVLLFSELFSLFASAVFLVGFVVNFVGSS
Sbjct: 61  SLRSYCHYGIGVFESEDIEQSDDRGGDFNLESVLLFSELFSLFASAVFLVGFVVNFVGSS 120

Query: 121 SKKALWVLIGDRGLVWGFPLLVATVVLNTWIRRRQWRRVCGEKASGGLKVNLLDRIEKLE 180
           SKKALWVLIGDRGLVWGFPLLVATVVLNTWIRRRQWRRVCGEKASGGLKVNLLDRIEKLE
Sbjct: 121 SKKALWVLIGDRGLVWGFPLLVATVVLNTWIRRRQWRRVCGEKASGGLKVNLLDRIEKLE 180

Query: 181 EDLRSSTTVIRALSRKLEKLGIRFLVTRKTVRDSIAESAALAQRNSQDTRTLAVQEDVLE 240
           EDLRSSTTVIRALSRKLEKLGIRFLVTRK+VRDSIAESAALAQRNS+DTRTL +QEDVLE
Sbjct: 181 EDLRSSTTVIRALSRKLEKLGIRFLVTRKSVRDSIAESAALAQRNSEDTRTLVMQEDVLE 240

Query: 241 KELLEIQKVLLAMQEQQQKQLELIIAIGEKEKLLKSKQRHDQEPTRTQRQNSANEESKEL 300
           KELLEIQKVLLAMQEQ QKQLELIIAIGEKEKLLKSKQRHDQEPTRTQRQNSANEESKEL
Sbjct: 241 KELLEIQKVLLAMQEQHQKQLELIIAIGEKEKLLKSKQRHDQEPTRTQRQNSANEESKEL 300

Query: 301 EAYGI 306
           EAYGI
Sbjct: 301 EAYGI 305

[Close]

BLAST of Carg14216 vs. ExPASy TrEMBL
Match: A0A6J1FNU5 (uncharacterized protein LOC111446891 OS=Cucurbita moschata OX=3662 GN=LOC111446891 PE=4 SV=1)

HSP 1 Score: 568.9 bits (1465), Expect = 1.3e-158
Identity = 303/305 (99.34%), Postives = 303/305 (99.34%), Query Frame = 0


Query: 1   MSLSSQNLFRCSNRLKFCSFTNSLPRCNTSFSLPIASRFLTNLYQFHVHTHKLQNPNNLS 60
           MSLSSQNLFRCSNRLKFCSFTNSLPRCNTSFSLPIASRFLTNLYQFHVHTHKLQNPNNLS
Sbjct: 1   MSLSSQNLFRCSNRLKFCSFTNSLPRCNTSFSLPIASRFLTNLYQFHVHTHKLQNPNNLS 60

Query: 61  FLRSYCHYGIGVFESEDIEQSDDRGGDFNLESVLLFSELFSLFASAVFLVGFVVNFVGSS 120
            LRSYCHYGIGV ESEDIEQSDDRGGDFNLESVLLFSELFSLFASAVFLVGFVVNFVGSS
Sbjct: 61  SLRSYCHYGIGVSESEDIEQSDDRGGDFNLESVLLFSELFSLFASAVFLVGFVVNFVGSS 120

Query: 121 SKKALWVLIGDRGLVWGFPLLVATVVLNTWIRRRQWRRVCGEKASGGLKVNLLDRIEKLE 180
           SKKALWVLIGDRGLVWGFPLLVATVVLNTWIRRRQWRRVCGEKASGGLKVNLLDRIEKLE
Sbjct: 121 SKKALWVLIGDRGLVWGFPLLVATVVLNTWIRRRQWRRVCGEKASGGLKVNLLDRIEKLE 180

Query: 181 EDLRSSTTVIRALSRKLEKLGIRFLVTRKTVRDSIAESAALAQRNSQDTRTLAVQEDVLE 240
           EDLRSSTTVIRALSRKLEKLGIRFLVTRKTVRDSIAESAALAQRNSQDTRTLAVQEDVLE
Sbjct: 181 EDLRSSTTVIRALSRKLEKLGIRFLVTRKTVRDSIAESAALAQRNSQDTRTLAVQEDVLE 240

Query: 241 KELLEIQKVLLAMQEQQQKQLELIIAIGEKEKLLKSKQRHDQEPTRTQRQNSANEESKEL 300
           KELLEIQKVLLAMQEQQQKQLELIIAIGEKEKLLKSKQRHDQEPTRTQRQNSANEESKEL
Sbjct: 241 KELLEIQKVLLAMQEQQQKQLELIIAIGEKEKLLKSKQRHDQEPTRTQRQNSANEESKEL 300

Query: 301 EAYGI 306
           EAYGI
Sbjct: 301 EAYGI 305

[Close]

BLAST of Carg14216 vs. ExPASy TrEMBL
Match: A0A6J1J2E7 (uncharacterized protein LOC111480696 OS=Cucurbita maxima OX=3661 GN=LOC111480696 PE=4 SV=1)

HSP 1 Score: 556.6 bits (1433), Expect = 6.4e-155
Identity = 297/305 (97.38%), Postives = 299/305 (98.03%), Query Frame = 0


Query: 1   MSLSSQNLFRCSNRLKFCSFTNSLPRCNTSFSLPIASRFLTNLYQFHVHTHKLQNPNNLS 60
           MSLSSQNLFRCSNRLKFCSFTNSLPRC+TS SLPIASRFLTNLYQFHVHTHKLQNPNNLS
Sbjct: 51  MSLSSQNLFRCSNRLKFCSFTNSLPRCSTSSSLPIASRFLTNLYQFHVHTHKLQNPNNLS 110

Query: 61  FLRSYCHYGIGVFESEDIEQSDDRGGDFNLESVLLFSELFSLFASAVFLVGFVVNFVGSS 120
            LRSYCHYGIGVFESEDIEQSDDRGGDFNLESVLLFSELFSLFASAVFLVGFVVNFVG  
Sbjct: 111 SLRSYCHYGIGVFESEDIEQSDDRGGDFNLESVLLFSELFSLFASAVFLVGFVVNFVGWC 170

Query: 121 SKKALWVLIGDRGLVWGFPLLVATVVLNTWIRRRQWRRVCGEKASGGLKVNLLDRIEKLE 180
           SKKALWVLIGDR LVWGFPLLVATVVLNTWIRRRQWRRVCGEKASGGLKVNLLDRIEKLE
Sbjct: 171 SKKALWVLIGDRRLVWGFPLLVATVVLNTWIRRRQWRRVCGEKASGGLKVNLLDRIEKLE 230

Query: 181 EDLRSSTTVIRALSRKLEKLGIRFLVTRKTVRDSIAESAALAQRNSQDTRTLAVQEDVLE 240
           EDLRSSTTVIR LSRKLEKLGIRFLVTRKTVRDSIAESAALAQRNS+DTRTLAVQEDVLE
Sbjct: 231 EDLRSSTTVIRVLSRKLEKLGIRFLVTRKTVRDSIAESAALAQRNSEDTRTLAVQEDVLE 290

Query: 241 KELLEIQKVLLAMQEQQQKQLELIIAIGEKEKLLKSKQRHDQEPTRTQRQNSANEESKEL 300
           KELLEIQKVLLAMQEQQQKQLELIIAIGEKEKLLKSKQRHDQEPTRTQRQNSANEESKEL
Sbjct: 291 KELLEIQKVLLAMQEQQQKQLELIIAIGEKEKLLKSKQRHDQEPTRTQRQNSANEESKEL 350

Query: 301 EAYGI 306
           EAYGI
Sbjct: 351 EAYGI 355

[Close]

BLAST of Carg14216 vs. ExPASy TrEMBL
Match: A0A6J1C4G5 (uncharacterized protein LOC111008398 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008398 PE=4 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 1.6e-113
Identity = 233/305 (76.39%), Postives = 255/305 (83.61%), Query Frame = 0


Query: 1   MSLSSQNLFRCSNRLKFCSFTNSLPRCNTSFSLPIASRFLTNLYQFHVHTHKLQNPNNLS 60
           MSL SQNLF CS R KFC F NS  R NTSFSLP+AS     L+QFH   H LQ P+NL+
Sbjct: 1   MSLPSQNLFTCSGRFKFCCFANSGLRNNTSFSLPVAS---PCLHQFHFQKHNLQIPHNLT 60

Query: 61  FLRSYCHYGIGVFESEDIEQSDDRGGDFNLESVLLFSELFSLFASAVFLVGFVVNFVGSS 120
             RS C Y IGVFESE +  S DR GDFNLES+L FSEL  LF+SAVFLV FVVNFVG +
Sbjct: 61  SRRSNCLYAIGVFESEQVAGSHDRDGDFNLESILSFSELLCLFSSAVFLVVFVVNFVGYN 120

Query: 121 SKKALWVLIGDRGLVWGFPLLVATVVLNTWIRRRQWRRVCGEKASGGLKVNLLDRIEKLE 180
           SKKALWVLIGDRGLVWGFPLLVATVVLN WIRRRQWRRVC + A G L+VNLLDRIEKLE
Sbjct: 121 SKKALWVLIGDRGLVWGFPLLVATVVLNAWIRRRQWRRVCWKTAKGALEVNLLDRIEKLE 180

Query: 181 EDLRSSTTVIRALSRKLEKLGIRFLVTRKTVRDSIAESAALAQRNSQDTRTLAVQEDVLE 240
           EDLRSST  IRALSR+LEKLGIRF+VTRKT+RDSIAE+AALAQRNS+DTRTLAVQED+LE
Sbjct: 181 EDLRSSTATIRALSRQLEKLGIRFMVTRKTLRDSIAETAALAQRNSEDTRTLAVQEDILE 240

Query: 241 KELLEIQKVLLAMQEQQQKQLELIIAIGEKEKLLKSKQRHDQEPTRTQRQNSANEESKEL 300
           KELLE+QKVLLAMQEQQ+KQ+ELIIAIGEK KL+  KQ  DQE TR +R  SANE+SKEL
Sbjct: 241 KELLEMQKVLLAMQEQQRKQIELIIAIGEKGKLMARKQALDQERTRIERHKSANEDSKEL 300

Query: 301 EAYGI 306
           EAYGI
Sbjct: 301 EAYGI 302

[Close]

BLAST of Carg14216 vs. ExPASy TrEMBL
Match: A0A5A7TN19 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G00060 PE=4 SV=1)

HSP 1 Score: 403.3 bits (1035), Expect = 9.1e-109
Identity = 227/307 (73.94%), Postives = 251/307 (81.76%), Query Frame = 0


Query: 1   MSLSSQNLFRCSNRLKFCSFTNSLPRCNTSFSLPIASRFLTNLYQFHVHTHKL--QNPNN 60
           M L SQNLFRCS+RLKFCSFTNSLPR N  FS  I+S  L +L QFH H HKL   + N+
Sbjct: 1   MLLPSQNLFRCSSRLKFCSFTNSLPRNNNHFSPSISSSSLQSLNQFHFHAHKLLTTHNNS 60

Query: 61  LSFLRSYCHYGIGVFESEDIEQSDDRGGDFNLESVLLFSELFSLFASAVFLVGFVVNFVG 120
            S  R YCH GIGV+ESED      R GDFNLESVLL SE   LF+SAVFLV FV+NFVG
Sbjct: 61  TSRHRIYCHCGIGVYESEDAA----RSGDFNLESVLLLSESIFLFSSAVFLVVFVLNFVG 120

Query: 121 SSSKKALWVLIGDRGLVWGFPLLVATVVLNTWIRRRQWRRVCGEKASGGLKVNLLDRIEK 180
           SSSKK +W+L+ DRGLVWGFPLLVATVVLN+WIRR QWRR+C  K SGGLKVNLLDR EK
Sbjct: 121 SSSKKGIWMLMCDRGLVWGFPLLVATVVLNSWIRRLQWRRICWGKTSGGLKVNLLDRFEK 180

Query: 181 LEEDLRSSTTVIRALSRKLEKLGIRFLVTRKTVRDSIAESAALAQRNSQDTRTLAVQEDV 240
           LEEDLRS   VIR LSRKLEKLGIR+ VTRKT++D IAE+AALAQRNS+D +TLAVQED+
Sbjct: 181 LEEDLRSLMIVIRGLSRKLEKLGIRYRVTRKTLKDPIAETAALAQRNSEDAQTLAVQEDI 240

Query: 241 LEKELLEIQKVLLAMQEQQQKQLELIIAIGEKEKLLKSKQRHDQEPTRTQRQNSANEESK 300
           LEKELLE+QKVLLAMQEQQQKQLELI+AIGEK KL++SKQ  DQE TR  RQNSANEE K
Sbjct: 241 LEKELLEMQKVLLAMQEQQQKQLELIVAIGEKRKLMESKQTRDQERTRIDRQNSANEELK 300

Query: 301 ELEAYGI 306
           ELEAY I
Sbjct: 301 ELEAYEI 303

[Close]

BLAST of Carg14216 vs. ExPASy TrEMBL
Match: A0A1S3BXY7 (uncharacterized protein LOC103494426 OS=Cucumis melo OX=3656 GN=LOC103494426 PE=4 SV=1)

HSP 1 Score: 403.3 bits (1035), Expect = 9.1e-109
Identity = 227/307 (73.94%), Postives = 251/307 (81.76%), Query Frame = 0


Query: 1   MSLSSQNLFRCSNRLKFCSFTNSLPRCNTSFSLPIASRFLTNLYQFHVHTHKL--QNPNN 60
           M L SQNLFRCS+RLKFCSFTNSLPR N  FS  I+S  L +L QFH H HKL   + N+
Sbjct: 1   MLLPSQNLFRCSSRLKFCSFTNSLPRNNNHFSPSISSSSLQSLNQFHFHAHKLLTTHNNS 60

Query: 61  LSFLRSYCHYGIGVFESEDIEQSDDRGGDFNLESVLLFSELFSLFASAVFLVGFVVNFVG 120
            S  R YCH GIGV+ESED      R GDFNLESVLL SE   LF+SAVFLV FV+NFVG
Sbjct: 61  TSRHRIYCHCGIGVYESEDAA----RSGDFNLESVLLLSESIFLFSSAVFLVVFVLNFVG 120

Query: 121 SSSKKALWVLIGDRGLVWGFPLLVATVVLNTWIRRRQWRRVCGEKASGGLKVNLLDRIEK 180
           SSSKK +W+L+ DRGLVWGFPLLVATVVLN+WIRR QWRR+C  K SGGLKVNLLDR EK
Sbjct: 121 SSSKKGIWMLMCDRGLVWGFPLLVATVVLNSWIRRLQWRRICWGKTSGGLKVNLLDRFEK 180

Query: 181 LEEDLRSSTTVIRALSRKLEKLGIRFLVTRKTVRDSIAESAALAQRNSQDTRTLAVQEDV 240
           LEEDLRS   VIR LSRKLEKLGIR+ VTRKT++D IAE+AALAQRNS+D +TLAVQED+
Sbjct: 181 LEEDLRSLMIVIRGLSRKLEKLGIRYRVTRKTLKDPIAETAALAQRNSEDAQTLAVQEDI 240

Query: 241 LEKELLEIQKVLLAMQEQQQKQLELIIAIGEKEKLLKSKQRHDQEPTRTQRQNSANEESK 300
           LEKELLE+QKVLLAMQEQQQKQLELI+AIGEK KL++SKQ  DQE TR  RQNSANEE K
Sbjct: 241 LEKELLEMQKVLLAMQEQQQKQLELIVAIGEKRKLMESKQTRDQERTRIDRQNSANEELK 300

Query: 301 ELEAYGI 306
           ELEAY I
Sbjct: 301 ELEAYEI 303

[Close]

BLAST of Carg14216 vs. TAIR 10
Match: AT5G65250.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 175.6 bits (444), Expect = 5.9e-44
Identity = 128/296 (43.24%), Postives = 171/296 (57.77%), Query Frame = 0


Query: 10  RCSNRLKFC---SFTNSLPRCNTSFSLPIASRFLTNLYQFHVHTHKLQNPNNLSFLRSYC 69
           R S R   C   S   +  R + SF  PI  R            H +   +N    R+Y 
Sbjct: 19  RISRRSNLCFAVSAARASRRDSISFPQPIFLR------------HVISTQSNFEIDRNYR 78

Query: 70  HYGIGVFESEDIEQS---DDRGGD-FNLESVLLFSELFSLFASAVFLVGFVVNFVGSSSK 129
            +   +   ED   S   +D   D F+L S + F+E   + +SAV  V   VN+V     
Sbjct: 79  AHASSIGSFEDSSSSNLLEDASSDGFDLGSFVSFAEALCILSSAVISVVLAVNYVVVGE- 138

Query: 130 KALWVLIGDRGLVWGFPLLVATVVLNTWIRRRQWRRVC-GEKASGGLKVNLLDRIEKLEE 189
                 IG + L  GF  LV +V   +W+RRRQW R+C G + S G   NL+ R+EKLE+
Sbjct: 139 ------IGKKVLSLGFVGLVGSVATGSWLRRRQWMRICKGARESEG--TNLIRRLEKLEK 198

Query: 190 DLRSSTTVIRALSRKLEKLGIRFLVTRKTVRDSIAESAALAQRNSQDTRTLAVQEDVLEK 249
           DL+SST+++R LSR LEKLGIRF VTRK +++ I+E+AALAQ+NS+ TR L  Q+++LEK
Sbjct: 199 DLKSSTSIVRVLSRHLEKLGIRFRVTRKALKEPISETAALAQKNSEATRVLVAQQEILEK 258

Query: 250 ELLEIQKVLLAMQEQQQKQLELIIAIGEKEKLLKSKQRHDQEPTRTQRQNSANEES 298
           EL EIQKVLLAMQEQQ+KQLELI+ I +  KL +S     Q P+  QR+N A E S
Sbjct: 259 ELGEIQKVLLAMQEQQRKQLELILTIAKSSKLFESSTSSKQSPSE-QRKNKAEEPS 292

The following BLAST results are available for this feature:

BLAST of Carg14216 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7031283.1	3.6e-160	100.00	hypothetical protein SDJN02_05323 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6600645.1	3.1e-159	99.67	hypothetical protein SDJN03_05878, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022941579.1	2.6e-158	99.34	uncharacterized protein LOC111446891 [Cucurbita moschata]	[more]
XP_022981639.1	1.3e-154	97.38	uncharacterized protein LOC111480696 [Cucurbita maxima]	[more]
XP_023516360.1	3.9e-154	97.05	uncharacterized protein LOC111780219 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg14216 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg14216 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FNU5	1.3e-158	99.34	uncharacterized protein LOC111446891 OS=Cucurbita moschata OX=3662 GN=LOC1114468...	[more]
A0A6J1J2E7	6.4e-155	97.38	uncharacterized protein LOC111480696 OS=Cucurbita maxima OX=3661 GN=LOC111480696...	[more]
A0A6J1C4G5	1.6e-113	76.39	uncharacterized protein LOC111008398 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A5A7TN19	9.1e-109	73.94	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BXY7	9.1e-109	73.94	uncharacterized protein LOC103494426 OS=Cucumis melo OX=3656 GN=LOC103494426 PE=...	[more]

BLAST of Carg14216 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G65250.1	5.9e-44	43.24	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 239..259
None	No IPR available	COILS	Coil	Coil	coord: 169..196
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 274..296
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 274..305
None	No IPR available	PANTHER	PTHR36408:SF1	TRANSMEMBRANE PROTEIN	coord: 1..301
None	No IPR available	PANTHER	PTHR36408	TRANSMEMBRANE PROTEIN	coord: 1..301

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg14216-RA	Carg14216-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane