Carg14192 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg14192
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	regulation of nuclear pre-mRNA domain-containing protein 1B-like
Location	Carg_Chr04: 4287520 .. 4292000 (-)
RNA-Seq Expression	Carg14192
Synteny	Carg14192

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTTCTTCCTCTGCAACTCTCTGTTTCCTTCAAGCTTCAATTTCTCCTCCTCCAACACTCCCTTCTTCCGATTCCATTTCTTCCTTTCAACAATACCCACTACCTAATTTCCCCTTTCACTCTCATTCCGCCCTTCCATTTCCCTTTTCTCTGCATTCCCTCCACCCTCTCGCTCCTCAACCTTCCTCTCCTTCCATTTCTTCCGCTCCTACTTTCCTGGCTCCAATTGGGTTTTCTTCTCCCGCTTCTGGGGGTTCTTTTTTGGGCATCCGGAGGTCTTTGTTGCTGATTGCACTTTCCGGATCTTTCTTCTTTTGCTTGCTTGCTCTCTAGGGATTTCTACTGTTCGTTTTTGTGATTTGTTCCACGGCCTAGTTTCGTTGCTTCTGTACTGGAATGAATAGTGTGTTCAGTGAGCAAATACTTGCTGATAAGCTGTCGAAGCTCAATAGCACGCAGCAGTGTATTGAAAGTATCCTTTTTATTTCGTTCTTCTTCTGGAAACTAATGCTTTTACTGCCTTTTAGTTATTGTTGCATCGTTTCTTATCTGTTTCTAGGTTGGGATATGACCTGGGTTCGAACGATTGTGTTTAATTTCCGTAGTTTTGGGTAATCAATTCTATCAATATCTTGAACTTTGAACTTCTTATCTTCAAATTGATAATTTGCTGCTTATTTTGTGTTGTTTTGGCCAACCTTTTCCACTGCCTTTTATCTGCAGTGCTTTATCTCCTTTTAAAATCTTTCCAGCAGCATCCTTGTTTCATGTTTGCTTTTGAAAGCTTTAGCTTCAAGTCCGTTAGATTTCCTTTTACCATTCAAAGGTTGGATGGGGATCTTATGGAAATTGCCTATCAGACTTCATATATCGTTTCTTCTTGAAACGCTATCAACAAGGGTTTTTATAATTAGTCTCTTTGGTGTTATTGCTTTCCTTATCCTGTTCTTTTTGGTGTTAGTTTGTGCCACCAATGTTGAATTAGCTACAAAAGCCTTTCTGTTTCCTTAACCATTTTCCTATAGCTTTGTCACATTGGTGTATATTTCACAGAGGCAAGGCTGAACTGGTAGTTGCAACATGGGATAAACAGTTTCATAATTCAGAAATGATTCAGAAAGTTCCTCTTTTGTATCTTGCAAATGACATCTTACAAAACAGTAAGCGTAAGGGAAATGAATTCGTCACTGAGTTCTGGAAGGTTCTTCCAGCAGCGCTCAAGAACGTCCTTGAGAACGGCGATAACCATGGAAAAACTGTAATTTCCAGATTGGTAAGTTGTTTTCTTTCCTCTTCATGGATTAATGGTCTCAACCTTCTTGTGTGTTGTTAGGTTTTCCTATGAACTTTGCTGGTGATAACTGATAAAAATCAAAGATGAAATTGTTGCAATTTAGCAGAAGAGGCGCTCCTTTTTGTTGGGTGTCTGCGATTGTTGTCAGTTATGTCTACTAAAAACGAAAACAAATTGCCGATTTCTTGAGCATTTAAACGGTTCTTAAAGTACTTCCAGGATCTGATTGTATGCATTTCTTCCTTCCTTTGAATATGTCAATGAAATTGTGCTTGCTCATTCTTAGGTTGATATATGGGAACAAAGAAAGGTATTTGGATCTCGCACACGAAGCCTCAAAGATGTAATACTTGGGGAAGAGGCACCTCCACCTCTAGAGTTCAGTAAAAAACGTACTCGATCAGTCAGAATTGTCAAAAGAGATTCACGGTCGATTAGAACGGTGAGTTACCATTTTATCTTCAGCTTCTTTTTCCATTTTTGTTTCTTTTGTGTGCCACCAAGAATTATGGCAGACACTTGTTTGATTCTCCATGGCTGCTGTAAACCTTACAATGCCTTTGTAGTTGAGTTGACATTATACCATTAATTTTGGATGCAGAAATTGTGTATTGGAAGTGCAGCCGAAAAAATTGTATCGGCATTTCACCTGGTCCTAAGTGAATATGCTAATGAAGAAACCGAGATGACCAACTGTAATTCTGCGGTTCAACGTGTAAGGAAGATGGAAAGCGACGTTGATGTTGCTTGTTCCATGGGTATGACAACAATGATTTAATGTTATTCTGTCCTGTCCACATTTTTCCCAACTTCATGTTCTGTATCAATTTGTTTTGGAAGAAATTCAAAATTGTCTTTTTAGTTGAAATTTCCAAATTACATGGTATCTGAGTTTCTACCACTATCCACCAGCAAAGAATCCCCAACGTAAAAAGTTGGCCAAAGAACTTGAAGAGGAAGAAAGTATTCTGAAACAGTGTATCGAGAAACTACAATCGGGTGAAGCCAGTCGGATGGCGCTTATATCTCAGTTAAAAGAAGCTCTGCACGTTCAGGTACCTTGATCTATCATTTTTCAATGCCCTTTGGAAGTTTGAACAAAATTCTATTTCTGTATTACATTATGGACTCACTGATAAATTCGGGAAACGGGACAATCCAATTGTAGGAATCGGAGCTGGAGAATATTCGAACTCAGATGCAGGTATTTTCTTGACAGAAATAACCTGTTTTGCTTCTGTATCAACTTTACATTTGATAGAACTTCAACATGAATATTTTTGGTTCGTTTATATGGAAAAATGATGGATATCTCTATTTATGTATGAAAATGATGGGTGCTGAAAATTGAAATCTTTTGGAATCATTATTTCATTTCAAACTTCAAAAACTACAGGTAGCTCAGGCGCAGGCAGAGGAGGCAAGAAATATGCAAAACCGGCTAAATGATGAAGGCTATGTATCAAAATCTTCCACCAGTGATTCAAAAGCAAAAGCAGGACAGACTCCTAAGAAGTCTGCTGCAGCCATTGCCGCAGAGGTTGCTGACAAGCTCGCAGCTTCTAGCTCCTCTCAAATGATCATGACATCAGTTCTCTCCACATTCGCAGCTGAAGAGGCAAAGAACACTGGTCTAACAAAGGCCAACAATGGATTGACCGTGTTCACACAGAACCCCATGAGTTCCCCTGCTAATTCTATCTTAAAACCTGAGGCTGAAGACGCAAAGAACACTGGTGTAACAAAGACCAACAATGGATTGAATTCGTTCGCACCGAAGCCCATGAGTTCTTCCAACTCTATCTTAAAACCTGAAGCGTTGGCCATTGGTTCAGATCCTAATGTTTTCATGTCTATGCAGCCGCATCCTGCTCCCACTAACCATTCATATCAATCTGTTATGGTGCCCCAACCAACGATACAGAGCCAAGCCCATAATTCGCAAGCTCAATACCAGATGTTTCCAAACGCTCCTTCCCAGCAATATTTGCAGCTCTCAAATGGAGTTTTAACCCCATATGGTTATGGTAGTCTTCCAAGCTCAACTCCGATGCCACCACCACCTATGCCCCATATGGTTAGTCCGGTGGTGCCCTTGACCCAGCAGATGCTGCAACAGCCATCACCTATGATACAAACACAACAAGTTCCTTTCACGCAGCAACCTTTAGCCCCTAGCTTCCGACCGCTTCAGCCGCCTGGGATGGTGTACTATGGGCATCCTCCCCCTTCTCAGTGATAATTTTGTGCTAAAGGTATCTTCTCTTCTGCAGTTCTTGATTAGACAATGTCATTCAATGCCATTAAATTTTGTTCATGTACATTGGCACCAATGAAATTTGACATGGCCACAGATAGCATTCATGGGCCCTTTTTAGTTTAAGAAGGCCATTAGGTAATATGTAAACATCCTTGGATACTTGCATATGCTTTAGCCTCAGTAAGTTCAGTTTGATGCAATGAAGCTCGTGTAAATTTAGCATCGTCAGAGTCGACTTACTGTACATTACTTTATCCTTTGAATGCCAGGTCAAGTTTTAGACGTACCACACCAGTCGTTGCACGTAGATTTCTGAATGTACGAACCTGCAAATGAAGCAAGAGCTAAATCATATTGAGCTGTGGTGGTAAGGACTGGCAATTTTTAGTACATATGTTGTGATAATTACGTTAAGATCACTATCTTTCTCCCTCTACCCTACTTTGTGGGTGAAGATGTAGAAAGTATGGAAACGATGTTTACTGGTATGAAGCTACACTTCTTGGAGATCACTCAGCCCTATGATTTCTTAAATAGGTTCCATATGGTTCAGCTCAATTTTATGAGTTGAAATCGACGACAAACCATTGTACTGGTAAAAGAAAGAGCAGATGACAGACGACGAGCTAGCCCCCACGAACATCTGTGTTCTTCGTCGTTGAAGATGTGGAAGTGCTGCTAGCAAAGGCTAGTAGGTTCCCTGAATACTGTGGCAGCCTGCCTTCATGAAAGTGCTCTGAAAGAGAGGTTCTTTGGCAATCAATAGGGTTTCTCTCTATCAAAAGATATGAATGAAAATTCAAAGGCTCAAAACATTGATTCTGAGAGCTTGTGAAGCTCCGGAGACATAATGGGCAAACTAAAGGAAAATGAATGAACTTAGAAGACTTGATATTCACACATAATTAATTATCAAAGTAGTTTAAT

mRNA sequence

CCTTCTTCCTCTGCAACTCTCTGTTTCCTTCAAGCTTCAATTTCTCCTCCTCCAACACTCCCTTCTTCCGATTCCATTTCTTCCTTTCAACAATACCCACTACCTAATTTCCCCTTTCACTCTCATTCCGCCCTTCCATTTCCCTTTTCTCTGCATTCCCTCCACCCTCTCGCTCCTCAACCTTCCTCTCCTTCCATTTCTTCCGCTCCTACTTTCCTGGCTCCAATTGGGTTTTCTTCTCCCGCTTCTGGGGGTTCTTTTTTGGGCATCCGGAGGTCTTTGTTGCTGATTGCACTTTCCGGATCTTTCTTCTTTTGCTTGCTTGCTCTCTAGGGATTTCTACTGTTCGTTTTTGTGATTTGTTCCACGGCCTAGTTTCGTTGCTTCTGTACTGGAATGAATAGTGTGTTCAGTGAGCAAATACTTGCTGATAAGCTGTCGAAGCTCAATAGCACGCAGCAGTGTATTGAAACTTTGTCACATTGGTGTATATTTCACAGAGGCAAGGCTGAACTGGTAGTTGCAACATGGGATAAACAGTTTCATAATTCAGAAATGATTCAGAAAGTTCCTCTTTTGTATCTTGCAAATGACATCTTACAAAACAGTAAGCGTAAGGGAAATGAATTCGTCACTGAGTTCTGGAAGGTTCTTCCAGCAGCGCTCAAGAACGTCCTTGAGAACGGCGATAACCATGGAAAAACTGTAATTTCCAGATTGGTTGATATATGGGAACAAAGAAAGGTATTTGGATCTCGCACACGAAGCCTCAAAGATGTAATACTTGGGGAAGAGGCACCTCCACCTCTAGAGTTCAGTAAAAAACGTACTCGATCAGTCAGAATTGTCAAAAGAGATTCACGGTCGATTAGAACGAAATTGTGTATTGGAAGTGCAGCCGAAAAAATTGTATCGGCATTTCACCTGGTCCTAAGTGAATATGCTAATGAAGAAACCGAGATGACCAACTGTAATTCTGCGGTTCAACGTGTAAGGAAGATGGAAAGCGACGTTGATGTTGCTTGTTCCATGGCAAAGAATCCCCAACGTAAAAAGTTGGCCAAAGAACTTGAAGAGGAAGAAAGTATTCTGAAACAGTGTATCGAGAAACTACAATCGGGTGAAGCCAGTCGGATGGCGCTTATATCTCAGTTAAAAGAAGCTCTGCACGTTCAGGAATCGGAGCTGGAGAATATTCGAACTCAGATGCAGGTAGCTCAGGCGCAGGCAGAGGAGGCAAGAAATATGCAAAACCGGCTAAATGATGAAGGCTATGTATCAAAATCTTCCACCAGTGATTCAAAAGCAAAAGCAGGACAGACTCCTAAGAAGTCTGCTGCAGCCATTGCCGCAGAGGTTGCTGACAAGCTCGCAGCTTCTAGCTCCTCTCAAATGATCATGACATCAGTTCTCTCCACATTCGCAGCTGAAGAGGCAAAGAACACTGGTCTAACAAAGGCCAACAATGGATTGACCGTGTTCACACAGAACCCCATGAGTTCCCCTGCTAATTCTATCTTAAAACCTGAGGCTGAAGACGCAAAGAACACTGGTGTAACAAAGACCAACAATGGATTGAATTCGTTCGCACCGAAGCCCATGAGTTCTTCCAACTCTATCTTAAAACCTGAAGCGTTGGCCATTGGTTCAGATCCTAATGTTTTCATGTCTATGCAGCCGCATCCTGCTCCCACTAACCATTCATATCAATCTGTTATGGTGCCCCAACCAACGATACAGAGCCAAGCCCATAATTCGCAAGCTCAATACCAGATGTTTCCAAACGCTCCTTCCCAGCAATATTTGCAGCTCTCAAATGGAGTTTTAACCCCATATGGTTATGGTAGTCTTCCAAGCTCAACTCCGATGCCACCACCACCTATGCCCCATATGGTTAGTCCGGTGGTGCCCTTGACCCAGCAGATGCTGCAACAGCCATCACCTATGATACAAACACAACAAGTTCCTTTCACGCAGCAACCTTTAGCCCCTAGCTTCCGACCGCTTCAGCCGCCTGGGATGGTGTACTATGGGCATCCTCCCCCTTCTCAGTGATAATTTTGTGCTAAAGGTCAAGTTTTAGACGTACCACACCAGTCGTTGCACGTAGATTTCTGAATGTACGAACCTGCAAATGAAGCAAGAGCTAAATCATATTGAGCTGTGGTGGTAAGGACTGGCAATTTTTAGTACATATGTTGTGATAATTACGTTAAGATCACTATCTTTCTCCCTCTACCCTACTTTGTGGGTGAAGATGTAGAAAGTATGGAAACGATGTTTACTGGTATGAAGCTACACTTCTTGGAGATCACTCAGCCCTATGATTTCTTAAATAGGTTCCATATGGTTCAGCTCAATTTTATGAGTTGAAATCGACGACAAACCATTGTACTGGTAAAAGAAAGAGCAGATGACAGACGACGAGCTAGCCCCCACGAACATCTGTGTTCTTCGTCGTTGAAGATGTGGAAGTGCTGCTAGCAAAGGCTAGTAGGTTCCCTGAATACTGTGGCAGCCTGCCTTCATGAAAGTGCTCTGAAAGAGAGGTTCTTTGGCAATCAATAGGGTTTCTCTCTATCAAAAGATATGAATGAAAATTCAAAGGCTCAAAACATTGATTCTGAGAGCTTGTGAAGCTCCGGAGACATAATGGGCAAACTAAAGGAAAATGAATGAACTTAGAAGACTTGATATTCACACATAATTAATTATCAAAGTAGTTTAAT

Coding sequence (CDS)

ATGAATAGTGTGTTCAGTGAGCAAATACTTGCTGATAAGCTGTCGAAGCTCAATAGCACGCAGCAGTGTATTGAAACTTTGTCACATTGGTGTATATTTCACAGAGGCAAGGCTGAACTGGTAGTTGCAACATGGGATAAACAGTTTCATAATTCAGAAATGATTCAGAAAGTTCCTCTTTTGTATCTTGCAAATGACATCTTACAAAACAGTAAGCGTAAGGGAAATGAATTCGTCACTGAGTTCTGGAAGGTTCTTCCAGCAGCGCTCAAGAACGTCCTTGAGAACGGCGATAACCATGGAAAAACTGTAATTTCCAGATTGGTTGATATATGGGAACAAAGAAAGGTATTTGGATCTCGCACACGAAGCCTCAAAGATGTAATACTTGGGGAAGAGGCACCTCCACCTCTAGAGTTCAGTAAAAAACGTACTCGATCAGTCAGAATTGTCAAAAGAGATTCACGGTCGATTAGAACGAAATTGTGTATTGGAAGTGCAGCCGAAAAAATTGTATCGGCATTTCACCTGGTCCTAAGTGAATATGCTAATGAAGAAACCGAGATGACCAACTGTAATTCTGCGGTTCAACGTGTAAGGAAGATGGAAAGCGACGTTGATGTTGCTTGTTCCATGGCAAAGAATCCCCAACGTAAAAAGTTGGCCAAAGAACTTGAAGAGGAAGAAAGTATTCTGAAACAGTGTATCGAGAAACTACAATCGGGTGAAGCCAGTCGGATGGCGCTTATATCTCAGTTAAAAGAAGCTCTGCACGTTCAGGAATCGGAGCTGGAGAATATTCGAACTCAGATGCAGGTAGCTCAGGCGCAGGCAGAGGAGGCAAGAAATATGCAAAACCGGCTAAATGATGAAGGCTATGTATCAAAATCTTCCACCAGTGATTCAAAAGCAAAAGCAGGACAGACTCCTAAGAAGTCTGCTGCAGCCATTGCCGCAGAGGTTGCTGACAAGCTCGCAGCTTCTAGCTCCTCTCAAATGATCATGACATCAGTTCTCTCCACATTCGCAGCTGAAGAGGCAAAGAACACTGGTCTAACAAAGGCCAACAATGGATTGACCGTGTTCACACAGAACCCCATGAGTTCCCCTGCTAATTCTATCTTAAAACCTGAGGCTGAAGACGCAAAGAACACTGGTGTAACAAAGACCAACAATGGATTGAATTCGTTCGCACCGAAGCCCATGAGTTCTTCCAACTCTATCTTAAAACCTGAAGCGTTGGCCATTGGTTCAGATCCTAATGTTTTCATGTCTATGCAGCCGCATCCTGCTCCCACTAACCATTCATATCAATCTGTTATGGTGCCCCAACCAACGATACAGAGCCAAGCCCATAATTCGCAAGCTCAATACCAGATGTTTCCAAACGCTCCTTCCCAGCAATATTTGCAGCTCTCAAATGGAGTTTTAACCCCATATGGTTATGGTAGTCTTCCAAGCTCAACTCCGATGCCACCACCACCTATGCCCCATATGGTTAGTCCGGTGGTGCCCTTGACCCAGCAGATGCTGCAACAGCCATCACCTATGATACAAACACAACAAGTTCCTTTCACGCAGCAACCTTTAGCCCCTAGCTTCCGACCGCTTCAGCCGCCTGGGATGGTGTACTATGGGCATCCTCCCCCTTCTCAGTGA

Protein sequence

MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMIQKVPLLYLANDILQNSKRKGNEFVTEFWKVLPAALKNVLENGDNHGKTVISRLVDIWEQRKVFGSRTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLCIGSAAEKIVSAFHLVLSEYANEETEMTNCNSAVQRVRKMESDVDVACSMAKNPQRKKLAKELEEEESILKQCIEKLQSGEASRMALISQLKEALHVQESELENIRTQMQVAQAQAEEARNMQNRLNDEGYVSKSSTSDSKAKAGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKNTGLTKANNGLTVFTQNPMSSPANSILKPEAEDAKNTGVTKTNNGLNSFAPKPMSSSNSILKPEALAIGSDPNVFMSMQPHPAPTNHSYQSVMVPQPTIQSQAHNSQAQYQMFPNAPSQQYLQLSNGVLTPYGYGSLPSSTPMPPPPMPHMVSPVVPLTQQMLQQPSPMIQTQQVPFTQQPLAPSFRPLQPPGMVYYGHPPPSQ

Homology

[Close]

BLAST of Carg14192 vs. NCBI nr
Match: KAG7031259.1 (Regulation of nuclear pre-mRNA domain-containing protein 1B [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1043.1 bits (2696), Expect = 8.5e-301
Identity = 552/552 (100.00%), Postives = 552/552 (100.00%), Query Frame = 0


Query: 1   MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMIQKVPL 60
           MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMIQKVPL
Sbjct: 1   MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMIQKVPL 60

Query: 61  LYLANDILQNSKRKGNEFVTEFWKVLPAALKNVLENGDNHGKTVISRLVDIWEQRKVFGS 120
           LYLANDILQNSKRKGNEFVTEFWKVLPAALKNVLENGDNHGKTVISRLVDIWEQRKVFGS
Sbjct: 61  LYLANDILQNSKRKGNEFVTEFWKVLPAALKNVLENGDNHGKTVISRLVDIWEQRKVFGS 120

Query: 121 RTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLCIGSAAEKIVSAFHLVLS 180
           RTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLCIGSAAEKIVSAFHLVLS
Sbjct: 121 RTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLCIGSAAEKIVSAFHLVLS 180

Query: 181 EYANEETEMTNCNSAVQRVRKMESDVDVACSMAKNPQRKKLAKELEEEESILKQCIEKLQ 240
           EYANEETEMTNCNSAVQRVRKMESDVDVACSMAKNPQRKKLAKELEEEESILKQCIEKLQ
Sbjct: 181 EYANEETEMTNCNSAVQRVRKMESDVDVACSMAKNPQRKKLAKELEEEESILKQCIEKLQ 240

Query: 241 SGEASRMALISQLKEALHVQESELENIRTQMQVAQAQAEEARNMQNRLNDEGYVSKSSTS 300
           SGEASRMALISQLKEALHVQESELENIRTQMQVAQAQAEEARNMQNRLNDEGYVSKSSTS
Sbjct: 241 SGEASRMALISQLKEALHVQESELENIRTQMQVAQAQAEEARNMQNRLNDEGYVSKSSTS 300

Query: 301 DSKAKAGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKNTGLTKANNGLT 360
           DSKAKAGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKNTGLTKANNGLT
Sbjct: 301 DSKAKAGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKNTGLTKANNGLT 360

Query: 361 VFTQNPMSSPANSILKPEAEDAKNTGVTKTNNGLNSFAPKPMSSSNSILKPEALAIGSDP 420
           VFTQNPMSSPANSILKPEAEDAKNTGVTKTNNGLNSFAPKPMSSSNSILKPEALAIGSDP
Sbjct: 361 VFTQNPMSSPANSILKPEAEDAKNTGVTKTNNGLNSFAPKPMSSSNSILKPEALAIGSDP 420

Query: 421 NVFMSMQPHPAPTNHSYQSVMVPQPTIQSQAHNSQAQYQMFPNAPSQQYLQLSNGVLTPY 480
           NVFMSMQPHPAPTNHSYQSVMVPQPTIQSQAHNSQAQYQMFPNAPSQQYLQLSNGVLTPY
Sbjct: 421 NVFMSMQPHPAPTNHSYQSVMVPQPTIQSQAHNSQAQYQMFPNAPSQQYLQLSNGVLTPY 480

Query: 481 GYGSLPSSTPMPPPPMPHMVSPVVPLTQQMLQQPSPMIQTQQVPFTQQPLAPSFRPLQPP 540
           GYGSLPSSTPMPPPPMPHMVSPVVPLTQQMLQQPSPMIQTQQVPFTQQPLAPSFRPLQPP
Sbjct: 481 GYGSLPSSTPMPPPPMPHMVSPVVPLTQQMLQQPSPMIQTQQVPFTQQPLAPSFRPLQPP 540

Query: 541 GMVYYGHPPPSQ 553
           GMVYYGHPPPSQ
Sbjct: 541 GMVYYGHPPPSQ 552

[Close]

BLAST of Carg14192 vs. NCBI nr
Match: XP_023547643.1 (regulation of nuclear pre-mRNA domain-containing protein 1B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1036.2 bits (2678), Expect = 1.0e-298
Identity = 548/552 (99.28%), Postives = 549/552 (99.46%), Query Frame = 0


Query: 1   MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMIQKVPL 60
           MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMIQKVPL
Sbjct: 1   MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMIQKVPL 60

Query: 61  LYLANDILQNSKRKGNEFVTEFWKVLPAALKNVLENGDNHGKTVISRLVDIWEQRKVFGS 120
           LYLANDILQNSKRKGNEFVTEFWKVLPAALKNVLENGDNHGKTVISRLVDIWEQRKVFGS
Sbjct: 61  LYLANDILQNSKRKGNEFVTEFWKVLPAALKNVLENGDNHGKTVISRLVDIWEQRKVFGS 120

Query: 121 RTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLCIGSAAEKIVSAFHLVLS 180
           RTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLCIGSAAEKIVSAFHLVLS
Sbjct: 121 RTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLCIGSAAEKIVSAFHLVLS 180

Query: 181 EYANEETEMTNCNSAVQRVRKMESDVDVACSMAKNPQRKKLAKELEEEESILKQCIEKLQ 240
           EYANEETEMTNCNSAVQRVRKMESDVD ACS AKNPQRKKLAKELEEEESILKQCIEKLQ
Sbjct: 181 EYANEETEMTNCNSAVQRVRKMESDVDFACSTAKNPQRKKLAKELEEEESILKQCIEKLQ 240

Query: 241 SGEASRMALISQLKEALHVQESELENIRTQMQVAQAQAEEARNMQNRLNDEGYVSKSSTS 300
           SGEASRMALISQLKEALHVQESELENIRTQMQVAQAQAEEARNMQNRLNDEGYVSKSSTS
Sbjct: 241 SGEASRMALISQLKEALHVQESELENIRTQMQVAQAQAEEARNMQNRLNDEGYVSKSSTS 300

Query: 301 DSKAKAGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKNTGLTKANNGLT 360
           DSKAKAGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKNTGLTK NNGLT
Sbjct: 301 DSKAKAGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKNTGLTKTNNGLT 360

Query: 361 VFTQNPMSSPANSILKPEAEDAKNTGVTKTNNGLNSFAPKPMSSSNSILKPEALAIGSDP 420
           VFTQNPMSSPANSILKPEAEDAKNTG+TKTNNGLNSFAPKPMSSSNSILKPEALAIGSDP
Sbjct: 361 VFTQNPMSSPANSILKPEAEDAKNTGLTKTNNGLNSFAPKPMSSSNSILKPEALAIGSDP 420

Query: 421 NVFMSMQPHPAPTNHSYQSVMVPQPTIQSQAHNSQAQYQMFPNAPSQQYLQLSNGVLTPY 480
           NVFMSMQPHPAPTNHSYQSVMVPQPTIQSQAHNSQAQYQMFPNAPSQQYLQLSNGVLTPY
Sbjct: 421 NVFMSMQPHPAPTNHSYQSVMVPQPTIQSQAHNSQAQYQMFPNAPSQQYLQLSNGVLTPY 480

Query: 481 GYGSLPSSTPMPPPPMPHMVSPVVPLTQQMLQQPSPMIQTQQVPFTQQPLAPSFRPLQPP 540
           GYGSLPSSTPMPPPPMPHMVSPVVPLTQQMLQQPSPMIQTQQVPFTQQPLAPSFRPLQPP
Sbjct: 481 GYGSLPSSTPMPPPPMPHMVSPVVPLTQQMLQQPSPMIQTQQVPFTQQPLAPSFRPLQPP 540

Query: 541 GMVYYGHPPPSQ 553
           GMVYYGHPPPSQ
Sbjct: 541 GMVYYGHPPPSQ 552

[Close]

BLAST of Carg14192 vs. NCBI nr
Match: XP_022980133.1 (regulation of nuclear pre-mRNA domain-containing protein 1B-like [Cucurbita maxima])

HSP 1 Score: 1033.5 bits (2671), Expect = 6.7e-298
Identity = 546/552 (98.91%), Postives = 549/552 (99.46%), Query Frame = 0


Query: 1   MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMIQKVPL 60
           MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMIQKVPL
Sbjct: 1   MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMIQKVPL 60

Query: 61  LYLANDILQNSKRKGNEFVTEFWKVLPAALKNVLENGDNHGKTVISRLVDIWEQRKVFGS 120
           LYLANDILQNSKRKGNEFVTEFWKVLPAALKNVLENGDNHGKTVISRLVDIWEQRKVFGS
Sbjct: 61  LYLANDILQNSKRKGNEFVTEFWKVLPAALKNVLENGDNHGKTVISRLVDIWEQRKVFGS 120

Query: 121 RTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLCIGSAAEKIVSAFHLVLS 180
           RTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLCIGSAAEKIVSAFHLVLS
Sbjct: 121 RTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLCIGSAAEKIVSAFHLVLS 180

Query: 181 EYANEETEMTNCNSAVQRVRKMESDVDVACSMAKNPQRKKLAKELEEEESILKQCIEKLQ 240
           EYANEETEMTNCNSAVQRVRKME++VD ACSMAKNPQRKKLAKELEEEESILKQCIEKLQ
Sbjct: 181 EYANEETEMTNCNSAVQRVRKMENEVDFACSMAKNPQRKKLAKELEEEESILKQCIEKLQ 240

Query: 241 SGEASRMALISQLKEALHVQESELENIRTQMQVAQAQAEEARNMQNRLNDEGYVSKSSTS 300
           SGEASRMALISQLKEALHVQESELENIRTQMQVAQAQAEEARNMQNRLNDEGYVSK STS
Sbjct: 241 SGEASRMALISQLKEALHVQESELENIRTQMQVAQAQAEEARNMQNRLNDEGYVSKYSTS 300

Query: 301 DSKAKAGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKNTGLTKANNGLT 360
           DSKAKAGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKNTGLTK NNGLT
Sbjct: 301 DSKAKAGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKNTGLTKTNNGLT 360

Query: 361 VFTQNPMSSPANSILKPEAEDAKNTGVTKTNNGLNSFAPKPMSSSNSILKPEALAIGSDP 420
           VFTQNPMSSPANSILKPEAEDAKNTG+TKTNNGLNSFAPKPMSSSNSILKPEALAIGSDP
Sbjct: 361 VFTQNPMSSPANSILKPEAEDAKNTGLTKTNNGLNSFAPKPMSSSNSILKPEALAIGSDP 420

Query: 421 NVFMSMQPHPAPTNHSYQSVMVPQPTIQSQAHNSQAQYQMFPNAPSQQYLQLSNGVLTPY 480
           NVFMSMQPHPAPTNHSYQSVMVPQPTIQSQAHNSQAQYQMFPNAPSQQYLQLSNGVLTPY
Sbjct: 421 NVFMSMQPHPAPTNHSYQSVMVPQPTIQSQAHNSQAQYQMFPNAPSQQYLQLSNGVLTPY 480

Query: 481 GYGSLPSSTPMPPPPMPHMVSPVVPLTQQMLQQPSPMIQTQQVPFTQQPLAPSFRPLQPP 540
           GYGSLPSSTPMPPPPMPHMVSPVVPLTQQMLQQPSPMIQTQQVPFTQQPLAPSFRPLQPP
Sbjct: 481 GYGSLPSSTPMPPPPMPHMVSPVVPLTQQMLQQPSPMIQTQQVPFTQQPLAPSFRPLQPP 540

Query: 541 GMVYYGHPPPSQ 553
           GMVYYGHPPPSQ
Sbjct: 541 GMVYYGHPPPSQ 552

[Close]

BLAST of Carg14192 vs. NCBI nr
Match: XP_022942782.1 (regulation of nuclear pre-mRNA domain-containing protein 1B-like [Cucurbita moschata])

HSP 1 Score: 1023.8 bits (2646), Expect = 5.3e-295
Identity = 544/552 (98.55%), Postives = 545/552 (98.73%), Query Frame = 0


Query: 1   MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMIQKVPL 60
           MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMIQKVPL
Sbjct: 1   MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMIQKVPL 60

Query: 61  LYLANDILQNSKRKGNEFVTEFWKVLPAALKNVLENGDNHGKTVISRLVDIWEQRKVFGS 120
           LYLANDILQNSKRKGNEFVTEFWKVLPAALKNVLENGDNHGKTVISRLVDIWEQRKVFGS
Sbjct: 61  LYLANDILQNSKRKGNEFVTEFWKVLPAALKNVLENGDNHGKTVISRLVDIWEQRKVFGS 120

Query: 121 RTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLCIGSAAEKIVSAFHLVLS 180
           RTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLCIGSAAEKIVSAFHLVLS
Sbjct: 121 RTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLCIGSAAEKIVSAFHLVLS 180

Query: 181 EYANEETEMTNCNSAVQRVRKMESDVDVACSMAKNPQRKKLAKELEEEESILKQCIEKLQ 240
           EYANEETEMTNCNSAVQRVRKMESDVD ACS AKNPQRKKLAKELEEEESILKQCIEKLQ
Sbjct: 181 EYANEETEMTNCNSAVQRVRKMESDVDFACSTAKNPQRKKLAKELEEEESILKQCIEKLQ 240

Query: 241 SGEASRMALISQLKEALHVQESELENIRTQMQVAQAQAEEARNMQNRLNDEGYVSKSSTS 300
            GEASRMALISQLKEALHVQESELENIRTQMQVAQAQAEEARNMQNRLNDEGYVS SSTS
Sbjct: 241 LGEASRMALISQLKEALHVQESELENIRTQMQVAQAQAEEARNMQNRLNDEGYVSNSSTS 300

Query: 301 DSKAKAGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKNTGLTKANNGLT 360
           DSKAKAGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKNTGLTKANNGLT
Sbjct: 301 DSKAKAGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKNTGLTKANNGLT 360

Query: 361 VFTQNPMSSPANSILKPEAEDAKNTGVTKTNNGLNSFAPKPMSSSNSILKPEALAIGSDP 420
           VFTQNPMSSPANSILKPEAEDAKNTG+TKTNNGLNSF PKPMSSSNSILKPEALAIGSDP
Sbjct: 361 VFTQNPMSSPANSILKPEAEDAKNTGLTKTNNGLNSFTPKPMSSSNSILKPEALAIGSDP 420

Query: 421 NVFMSMQPHPAPTNHSYQSVMVPQPTIQSQAHNSQAQYQMFPNAPSQQYLQLSNGVLTPY 480
           NVFMSMQPHPAP NHSYQSVMVPQPTIQSQAHNSQAQYQMFPNAPSQQYLQLSNGVLTPY
Sbjct: 421 NVFMSMQPHPAPNNHSYQSVMVPQPTIQSQAHNSQAQYQMFPNAPSQQYLQLSNGVLTPY 480

Query: 481 GYGSLPSSTPMPPPPMPHMVSPVVPLTQQMLQQPSPMIQTQQVPFTQQPLAPSFRPLQPP 540
           GYGSLPSSTPMPPPPMPHMVSPVVPLTQQMLQQPSPMIQT QVPFTQQPLAPSFRPLQPP
Sbjct: 481 GYGSLPSSTPMPPPPMPHMVSPVVPLTQQMLQQPSPMIQT-QVPFTQQPLAPSFRPLQPP 540

Query: 541 GMVYYGHPPPSQ 553
           GMVYYGHPPPSQ
Sbjct: 541 GMVYYGHPPPSQ 551

[Close]

BLAST of Carg14192 vs. NCBI nr
Match: KAG6600625.1 (Regulation of nuclear pre-mRNA domain-containing protein 1B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 927.2 bits (2395), Expect = 6.8e-266
Identity = 491/493 (99.59%), Postives = 491/493 (99.59%), Query Frame = 0


Query: 7    EQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMIQKVPLLYLAND 66
            EQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMIQKVPLLYLAND
Sbjct: 726  EQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMIQKVPLLYLAND 785

Query: 67   ILQNSKRKGNEFVTEFWKVLPAALKNVLENGDNHGKTVISRLVDIWEQRKVFGSRTRSLK 126
            ILQNSKRKGNEFVTEFWKVLPAALKNVLENGDNHGKTVISRLVDIWEQRKVFGSRTRSLK
Sbjct: 786  ILQNSKRKGNEFVTEFWKVLPAALKNVLENGDNHGKTVISRLVDIWEQRKVFGSRTRSLK 845

Query: 127  DVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLCIGSAAEKIVSAFHLVLSEYANEE 186
            DVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLCIGSAAEKIVSAFHLVLSEYANEE
Sbjct: 846  DVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLCIGSAAEKIVSAFHLVLSEYANEE 905

Query: 187  TEMTNCNSAVQRVRKMESDVDVACSMAKNPQRKKLAKELEEEESILKQCIEKLQSGEASR 246
            TEMTNCNSAVQRVRKMESDVDVACSMAKNPQRKKLAKELEEEESILKQCIEKLQSGEASR
Sbjct: 906  TEMTNCNSAVQRVRKMESDVDVACSMAKNPQRKKLAKELEEEESILKQCIEKLQSGEASR 965

Query: 247  MALISQLKEALHVQESELENIRTQMQVAQAQAEEARNMQNRLNDEGYVSKSSTSDSKAKA 306
            MALISQLKEALHVQESELENIRTQMQVAQAQAEEARNMQNRLNDEGYVSKSSTSDSKAKA
Sbjct: 966  MALISQLKEALHVQESELENIRTQMQVAQAQAEEARNMQNRLNDEGYVSKSSTSDSKAKA 1025

Query: 307  GQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKNTGLTKANNGLTVFTQNP 366
            GQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKNTGLTKANNGLTVF QNP
Sbjct: 1026 GQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKNTGLTKANNGLTVFAQNP 1085

Query: 367  MSSPANSILKPEAEDAKNTGVTKTNNGLNSFAPKPMSSSNSILKPEALAIGSDPNVFMSM 426
            MSSPANSILKPEAEDAKNTGVTKTNNGLNSFAPKPMSSSNSILKPEALAIGSD NVFMSM
Sbjct: 1086 MSSPANSILKPEAEDAKNTGVTKTNNGLNSFAPKPMSSSNSILKPEALAIGSDSNVFMSM 1145

Query: 427  QPHPAPTNHSYQSVMVPQPTIQSQAHNSQAQYQMFPNAPSQQYLQLSNGVLTPYGYGSLP 486
            QPHPAPTNHSYQSVMVPQPTIQSQAHNSQAQYQMFPNAPSQQYLQLSNGVLTPYGYGSLP
Sbjct: 1146 QPHPAPTNHSYQSVMVPQPTIQSQAHNSQAQYQMFPNAPSQQYLQLSNGVLTPYGYGSLP 1205

Query: 487  SSTPMPPPPMPHM 500
            SSTPMPPPPMPHM
Sbjct: 1206 SSTPMPPPPMPHM 1218

[Close]

BLAST of Carg14192 vs. ExPASy Swiss-Prot
Match: Q9CSU0 (Regulation of nuclear pre-mRNA domain-containing protein 1B OS=Mus musculus OX=10090 GN=Rprd1b PE=1 SV=2)

HSP 1 Score: 111.3 bits (277), Expect = 3.5e-23
Identity = 91/303 (30.03%), Postives = 152/303 (50.17%), Query Frame = 0


Query: 3   SVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMIQKVPLLY 62
           S FSE  L  KLS+L+++QQ ++TLS W I HR  A  +V+ W ++   ++  +K+  LY
Sbjct: 2   SSFSESALEKKLSELSNSQQSVQTLSLWLIHHRKHAGPIVSVWHRELRKAKSNRKLTFLY 61

Query: 63  LANDILQNSKRKGNEFVTEFWKVLPAALKNVLENGDNHGKTVISRLVDIWEQRKVFGSR- 122
           LAND++QNSKRKG EF  EF  VL  A  +V    D   K  + RL++IW++R V+G   
Sbjct: 62  LANDVIQNSKRKGPEFTREFESVLVDAFSHVAREADEGCKKPLERLLNIWQERSVYGGEF 121

Query: 123 TRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKL---CIGSAAEKIVSAFHLV 182
            + LK  +   ++PPP    +K++     +KR  + I+ +      GS + +  SA  L+
Sbjct: 122 IQQLKLSMEDSKSPPPKAAEEKKS-----LKRTFQQIQEEEDDDYPGSYSPQDPSAGPLL 181

Query: 183 LSEYANEETEMTNCNSAVQRVRKM-------ESDVDVACSMAKNPQRKKLAKELEEEESI 242
             E      ++ N  S    VR+          DV +   +      ++L+K ++E   +
Sbjct: 182 TEELIKALQDLENAASGDATVRQKIASLPQEVQDVSLLEKITDKEAAERLSKTVDEACLL 241

Query: 243 LKQCIEKLQSGEASRMALISQL-------KEALHVQESELENIRTQM-QVAQAQAEEARN 287
           L +   +L +    R  L   L       KE L  +E +LE  + ++ +V Q + E   +
Sbjct: 242 LAEYNGRLAAELEDRRQLARMLVEYTQNQKEVLSEKEKKLEEYKQKLARVTQVRKELKSH 299

[Close]

BLAST of Carg14192 vs. ExPASy Swiss-Prot
Match: Q9NQG5 (Regulation of nuclear pre-mRNA domain-containing protein 1B OS=Homo sapiens OX=9606 GN=RPRD1B PE=1 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 4.6e-23
Identity = 91/303 (30.03%), Postives = 151/303 (49.83%), Query Frame = 0


Query: 3   SVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMIQKVPLLY 62
           S FSE  L  KLS+L+++QQ ++TLS W I HR  A  +V+ W ++   ++  +K+  LY
Sbjct: 2   SSFSESALEKKLSELSNSQQSVQTLSLWLIHHRKHAGPIVSVWHRELRKAKSNRKLTFLY 61

Query: 63  LANDILQNSKRKGNEFVTEFWKVLPAALKNVLENGDNHGKTVISRLVDIWEQRKVFGSR- 122
           LAND++QNSKRKG EF  EF  VL  A  +V    D   K  + RL++IW++R V+G   
Sbjct: 62  LANDVIQNSKRKGPEFTREFESVLVDAFSHVAREADEGCKKPLERLLNIWQERSVYGGEF 121

Query: 123 TRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKL---CIGSAAEKIVSAFHLV 182
            + LK  +   ++PPP     K T   + +KR  + I+ +      GS + +  SA  L+
Sbjct: 122 IQQLKLSMEDSKSPPP-----KATEEKKSLKRTFQQIQEEEDDDYPGSYSPQDPSAGPLL 181

Query: 183 LSEYANEETEMTNCNSAVQRVRKM-------ESDVDVACSMAKNPQRKKLAKELEEEESI 242
             E      ++ N  S    VR+          DV +   +      ++L+K ++E   +
Sbjct: 182 TEELIKALQDLENAASGDATVRQKIASLPQEVQDVSLLEKITDKEAAERLSKTVDEACLL 241

Query: 243 LKQCIEKLQSGEASRMALISQL-------KEALHVQESELENIRTQM-QVAQAQAEEARN 287
           L +   +L +    R  L   L       K+ L  +E +LE  + ++ +V Q + E   +
Sbjct: 242 LAEYNGRLAAELEDRRQLARMLVEYTQNQKDVLSEKEKKLEEYKQKLARVTQVRKELKSH 299

[Close]

BLAST of Carg14192 vs. ExPASy Swiss-Prot
Match: Q0P5J9 (Regulation of nuclear pre-mRNA domain-containing protein 1A OS=Bos taurus OX=9913 GN=RPRD1A PE=2 SV=2)

HSP 1 Score: 101.7 bits (252), Expect = 2.8e-20
Identity = 88/300 (29.33%), Postives = 146/300 (48.67%), Query Frame = 0


Query: 3   SVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMIQKVPLLY 62
           S FSE  L  KLS+L+++QQ ++TLS W I HR  +  +V  W+++   ++  +K+  LY
Sbjct: 2   SAFSEAALEKKLSELSNSQQSVQTLSLWLIHHRKHSRPIVTVWERELRKAKPNRKLTFLY 61

Query: 63  LANDILQNSKRKGNEFVTEFWKVLPAALKNVLENGDNHGKTVISRLVDIWEQRKVFGSRT 122
           LAND++QNSKRKG EF  +F  V+  A K+V    D   K  + R++ IWE+R V+ +  
Sbjct: 62  LANDVIQNSKRKGPEFTKDFAPVIVEAFKHVSSETDESCKKHLGRVLSIWEERSVYENDV 121

Query: 123 -RSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLCIGSAAEKIVSAFHLVLSE 182
              LK  + G++ P        R R+   +K D     + L  GS +E   +   L L  
Sbjct: 122 LEQLKQALYGDKKP--------RKRTYEQIKVDENENCSSL--GSPSEPPQT---LDLVR 181

Query: 183 YANEETEMTNCNSAV-QRVRKMESDVDVACSMAKNPQR---KKLAKELEEEESILKQCIE 242
              +     + ++AV QR+  +  +V     + K   +   ++L+K +E+   +L     
Sbjct: 182 ALQDLENAASGDAAVHQRIASLPVEVQEVSLLDKITDKESGERLSKMVEDACMLLADYNG 241

Query: 243 KLQSGEASRMALISQL-------KEALHVQESELENIRTQMQVAQAQAEEARNMQNRLND 291
           +L +    R  L   L       KEAL  +E +LE  + ++       +E R+    L D
Sbjct: 242 RLAAEIDDRKQLTRMLADFLRCQKEALAEKEHKLEEYKRKLARVSLVRKELRSRIQSLPD 288

[Close]

BLAST of Carg14192 vs. ExPASy Swiss-Prot
Match: Q96P16 (Regulation of nuclear pre-mRNA domain-containing protein 1A OS=Homo sapiens OX=9606 GN=RPRD1A PE=1 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 2.8e-20
Identity = 88/300 (29.33%), Postives = 146/300 (48.67%), Query Frame = 0


Query: 3   SVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMIQKVPLLY 62
           S FSE  L  KLS+L+++QQ ++TLS W I HR  +  +V  W+++   ++  +K+  LY
Sbjct: 2   SAFSEAALEKKLSELSNSQQSVQTLSLWLIHHRKHSRPIVTVWERELRKAKPNRKLTFLY 61

Query: 63  LANDILQNSKRKGNEFVTEFWKVLPAALKNVLENGDNHGKTVISRLVDIWEQRKVFGSRT 122
           LAND++QNSKRKG EF  +F  V+  A K+V    D   K  + R++ IWE+R V+ +  
Sbjct: 62  LANDVIQNSKRKGPEFTKDFAPVIVEAFKHVSSETDESCKKHLGRVLSIWEERSVYENDV 121

Query: 123 -RSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLCIGSAAEKIVSAFHLVLSE 182
              LK  + G++ P        R R+   +K D     + L  GS +E   +   L L  
Sbjct: 122 LEQLKQALYGDKKP--------RKRTYEQIKVDENENCSSL--GSPSEPPQT---LDLVR 181

Query: 183 YANEETEMTNCNSAV-QRVRKMESDVDVACSMAKNPQR---KKLAKELEEEESILKQCIE 242
              +     + ++AV QR+  +  +V     + K   +   ++L+K +E+   +L     
Sbjct: 182 ALQDLENAASGDAAVHQRIASLPVEVQEVSLLDKITDKESGERLSKMVEDACMLLADYNG 241

Query: 243 KLQSGEASRMALISQL-------KEALHVQESELENIRTQMQVAQAQAEEARNMQNRLND 291
           +L +    R  L   L       KEAL  +E +LE  + ++       +E R+    L D
Sbjct: 242 RLAAEIDDRKQLTRMLADFLRCQKEALAEKEHKLEEYKRKLARVSLVRKELRSRIQSLPD 288

[Close]

BLAST of Carg14192 vs. ExPASy Swiss-Prot
Match: Q5R8Y3 (Regulation of nuclear pre-mRNA domain-containing protein 1A OS=Pongo abelii OX=9601 GN=RPRD1A PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 2.8e-20
Identity = 88/300 (29.33%), Postives = 146/300 (48.67%), Query Frame = 0


Query: 3   SVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMIQKVPLLY 62
           S FSE  L  KLS+L+++QQ ++TLS W I HR  +  +V  W+++   ++  +K+  LY
Sbjct: 2   SAFSEAALEKKLSELSNSQQSVQTLSLWLIHHRKHSRPIVTVWERELRKAKPNRKLTFLY 61

Query: 63  LANDILQNSKRKGNEFVTEFWKVLPAALKNVLENGDNHGKTVISRLVDIWEQRKVFGSRT 122
           LAND++QNSKRKG EF  +F  V+  A K+V    D   K  + R++ IWE+R V+ +  
Sbjct: 62  LANDVIQNSKRKGPEFTKDFAPVIVEAFKHVSSETDESCKKHLGRVLSIWEERSVYENDV 121

Query: 123 -RSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLCIGSAAEKIVSAFHLVLSE 182
              LK  + G++ P        R R+   +K D     + L  GS +E   +   L L  
Sbjct: 122 LEQLKQALYGDKKP--------RKRTYEQIKVDENENCSSL--GSPSEPPQT---LDLVR 181

Query: 183 YANEETEMTNCNSAV-QRVRKMESDVDVACSMAKNPQR---KKLAKELEEEESILKQCIE 242
              +     + ++AV QR+  +  +V     + K   +   ++L+K +E+   +L     
Sbjct: 182 ALQDLENAASGDAAVHQRIASLPVEVQEVSLLDKITDKESGERLSKMVEDACMLLADYNG 241

Query: 243 KLQSGEASRMALISQL-------KEALHVQESELENIRTQMQVAQAQAEEARNMQNRLND 291
           +L +    R  L   L       KEAL  +E +LE  + ++       +E R+    L D
Sbjct: 242 RLAAEIDDRKQLTRMLADFLRCQKEALAEKEHKLEEYKRKLARVSLVRKELRSRIQSLPD 288

[Close]

BLAST of Carg14192 vs. ExPASy TrEMBL
Match: A0A6J1IYD8 (regulation of nuclear pre-mRNA domain-containing protein 1B-like OS=Cucurbita maxima OX=3661 GN=LOC111479608 PE=4 SV=1)

HSP 1 Score: 1033.5 bits (2671), Expect = 3.2e-298
Identity = 546/552 (98.91%), Postives = 549/552 (99.46%), Query Frame = 0


Query: 1   MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMIQKVPL 60
           MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMIQKVPL
Sbjct: 1   MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMIQKVPL 60

Query: 61  LYLANDILQNSKRKGNEFVTEFWKVLPAALKNVLENGDNHGKTVISRLVDIWEQRKVFGS 120
           LYLANDILQNSKRKGNEFVTEFWKVLPAALKNVLENGDNHGKTVISRLVDIWEQRKVFGS
Sbjct: 61  LYLANDILQNSKRKGNEFVTEFWKVLPAALKNVLENGDNHGKTVISRLVDIWEQRKVFGS 120

Query: 121 RTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLCIGSAAEKIVSAFHLVLS 180
           RTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLCIGSAAEKIVSAFHLVLS
Sbjct: 121 RTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLCIGSAAEKIVSAFHLVLS 180

Query: 181 EYANEETEMTNCNSAVQRVRKMESDVDVACSMAKNPQRKKLAKELEEEESILKQCIEKLQ 240
           EYANEETEMTNCNSAVQRVRKME++VD ACSMAKNPQRKKLAKELEEEESILKQCIEKLQ
Sbjct: 181 EYANEETEMTNCNSAVQRVRKMENEVDFACSMAKNPQRKKLAKELEEEESILKQCIEKLQ 240

Query: 241 SGEASRMALISQLKEALHVQESELENIRTQMQVAQAQAEEARNMQNRLNDEGYVSKSSTS 300
           SGEASRMALISQLKEALHVQESELENIRTQMQVAQAQAEEARNMQNRLNDEGYVSK STS
Sbjct: 241 SGEASRMALISQLKEALHVQESELENIRTQMQVAQAQAEEARNMQNRLNDEGYVSKYSTS 300

Query: 301 DSKAKAGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKNTGLTKANNGLT 360
           DSKAKAGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKNTGLTK NNGLT
Sbjct: 301 DSKAKAGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKNTGLTKTNNGLT 360

Query: 361 VFTQNPMSSPANSILKPEAEDAKNTGVTKTNNGLNSFAPKPMSSSNSILKPEALAIGSDP 420
           VFTQNPMSSPANSILKPEAEDAKNTG+TKTNNGLNSFAPKPMSSSNSILKPEALAIGSDP
Sbjct: 361 VFTQNPMSSPANSILKPEAEDAKNTGLTKTNNGLNSFAPKPMSSSNSILKPEALAIGSDP 420

Query: 421 NVFMSMQPHPAPTNHSYQSVMVPQPTIQSQAHNSQAQYQMFPNAPSQQYLQLSNGVLTPY 480
           NVFMSMQPHPAPTNHSYQSVMVPQPTIQSQAHNSQAQYQMFPNAPSQQYLQLSNGVLTPY
Sbjct: 421 NVFMSMQPHPAPTNHSYQSVMVPQPTIQSQAHNSQAQYQMFPNAPSQQYLQLSNGVLTPY 480

Query: 481 GYGSLPSSTPMPPPPMPHMVSPVVPLTQQMLQQPSPMIQTQQVPFTQQPLAPSFRPLQPP 540
           GYGSLPSSTPMPPPPMPHMVSPVVPLTQQMLQQPSPMIQTQQVPFTQQPLAPSFRPLQPP
Sbjct: 481 GYGSLPSSTPMPPPPMPHMVSPVVPLTQQMLQQPSPMIQTQQVPFTQQPLAPSFRPLQPP 540

Query: 541 GMVYYGHPPPSQ 553
           GMVYYGHPPPSQ
Sbjct: 541 GMVYYGHPPPSQ 552

[Close]

BLAST of Carg14192 vs. ExPASy TrEMBL
Match: A0A6J1FR83 (regulation of nuclear pre-mRNA domain-containing protein 1B-like OS=Cucurbita moschata OX=3662 GN=LOC111447713 PE=4 SV=1)

HSP 1 Score: 1023.8 bits (2646), Expect = 2.6e-295
Identity = 544/552 (98.55%), Postives = 545/552 (98.73%), Query Frame = 0


Query: 1   MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMIQKVPL 60
           MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMIQKVPL
Sbjct: 1   MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMIQKVPL 60

Query: 61  LYLANDILQNSKRKGNEFVTEFWKVLPAALKNVLENGDNHGKTVISRLVDIWEQRKVFGS 120
           LYLANDILQNSKRKGNEFVTEFWKVLPAALKNVLENGDNHGKTVISRLVDIWEQRKVFGS
Sbjct: 61  LYLANDILQNSKRKGNEFVTEFWKVLPAALKNVLENGDNHGKTVISRLVDIWEQRKVFGS 120

Query: 121 RTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLCIGSAAEKIVSAFHLVLS 180
           RTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLCIGSAAEKIVSAFHLVLS
Sbjct: 121 RTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLCIGSAAEKIVSAFHLVLS 180

Query: 181 EYANEETEMTNCNSAVQRVRKMESDVDVACSMAKNPQRKKLAKELEEEESILKQCIEKLQ 240
           EYANEETEMTNCNSAVQRVRKMESDVD ACS AKNPQRKKLAKELEEEESILKQCIEKLQ
Sbjct: 181 EYANEETEMTNCNSAVQRVRKMESDVDFACSTAKNPQRKKLAKELEEEESILKQCIEKLQ 240

Query: 241 SGEASRMALISQLKEALHVQESELENIRTQMQVAQAQAEEARNMQNRLNDEGYVSKSSTS 300
            GEASRMALISQLKEALHVQESELENIRTQMQVAQAQAEEARNMQNRLNDEGYVS SSTS
Sbjct: 241 LGEASRMALISQLKEALHVQESELENIRTQMQVAQAQAEEARNMQNRLNDEGYVSNSSTS 300

Query: 301 DSKAKAGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKNTGLTKANNGLT 360
           DSKAKAGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKNTGLTKANNGLT
Sbjct: 301 DSKAKAGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKNTGLTKANNGLT 360

Query: 361 VFTQNPMSSPANSILKPEAEDAKNTGVTKTNNGLNSFAPKPMSSSNSILKPEALAIGSDP 420
           VFTQNPMSSPANSILKPEAEDAKNTG+TKTNNGLNSF PKPMSSSNSILKPEALAIGSDP
Sbjct: 361 VFTQNPMSSPANSILKPEAEDAKNTGLTKTNNGLNSFTPKPMSSSNSILKPEALAIGSDP 420

Query: 421 NVFMSMQPHPAPTNHSYQSVMVPQPTIQSQAHNSQAQYQMFPNAPSQQYLQLSNGVLTPY 480
           NVFMSMQPHPAP NHSYQSVMVPQPTIQSQAHNSQAQYQMFPNAPSQQYLQLSNGVLTPY
Sbjct: 421 NVFMSMQPHPAPNNHSYQSVMVPQPTIQSQAHNSQAQYQMFPNAPSQQYLQLSNGVLTPY 480

Query: 481 GYGSLPSSTPMPPPPMPHMVSPVVPLTQQMLQQPSPMIQTQQVPFTQQPLAPSFRPLQPP 540
           GYGSLPSSTPMPPPPMPHMVSPVVPLTQQMLQQPSPMIQT QVPFTQQPLAPSFRPLQPP
Sbjct: 481 GYGSLPSSTPMPPPPMPHMVSPVVPLTQQMLQQPSPMIQT-QVPFTQQPLAPSFRPLQPP 540

Query: 541 GMVYYGHPPPSQ 553
           GMVYYGHPPPSQ
Sbjct: 541 GMVYYGHPPPSQ 551

[Close]

BLAST of Carg14192 vs. ExPASy TrEMBL
Match: A0A0A0KWH8 (CID domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G031050 PE=4 SV=1)

HSP 1 Score: 879.4 bits (2271), Expect = 7.8e-252
Identity = 481/560 (85.89%), Postives = 499/560 (89.11%), Query Frame = 0


Query: 1   MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMIQKVPL 60
           MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEM+QKVPL
Sbjct: 1   MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMVQKVPL 60

Query: 61  LYLANDILQNSKRKGNEFVTEFWKVLPAALKNVLENGDNHGKTVISRLVDIWEQRKVFGS 120
           LYLANDILQNSKRKGNEFVTEFWKVLP+ALK+VLENGD+HGK VISRLVDIWEQRKVFGS
Sbjct: 61  LYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLENGDSHGKNVISRLVDIWEQRKVFGS 120

Query: 121 RTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLCIGSAAEKIVSAFHLVLS 180
           RTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKL IGSAAEKIVSAFHLVLS
Sbjct: 121 RTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLSIGSAAEKIVSAFHLVLS 180

Query: 181 EYANEETEMTNCNSAVQRVRKMESDVDVACSMAKNPQRKKLAKELEEEESILKQCIEKLQ 240
           EY+NEETEMTNCNSAVQRVRKME+DVD ACSMAKNPQRKKLAKELEEEES+LKQCIEKLQ
Sbjct: 181 EYSNEETEMTNCNSAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESVLKQCIEKLQ 240

Query: 241 SGEASRMALISQLKEALHVQESELENIRTQMQVAQAQAEEARNMQNRLNDEGYVSKSSTS 300
           S EASR+ALI+QLKEALHVQESELENIRTQMQVAQAQAEEA+NMQNRLNDEGYVSK+S  
Sbjct: 241 SVEASRLALITQLKEALHVQESELENIRTQMQVAQAQAEEAKNMQNRLNDEGYVSKTSII 300

Query: 301 DSKAKAGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKNTGLTKANNGLT 360
           DS AKAGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAK+T L        
Sbjct: 301 DSNAKAGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKHTNL-------- 360

Query: 361 VFTQNPMSSPANSILKPEAEDAKNTGVTKTNNGLNSFAPKPM-SSSNSILKPEALAIGSD 420
                                      TKTNNGLN+FA KPM SS+NSI KPEA A+GSD
Sbjct: 361 ---------------------------TKTNNGLNAFASKPMRSSANSITKPEASAVGSD 420

Query: 421 PNVFMSMQPHPAPTNHSYQSVMVPQPTIQSQAHNSQAQYQMFPNAPSQQYLQLSNGVLTP 480
           PNVFMSMQP  AP NHSYQSVMVPQPT+QSQA NSQ QYQM P+APSQQYLQLSNGVLTP
Sbjct: 421 PNVFMSMQPLAAPANHSYQSVMVPQPTMQSQASNSQTQYQMLPSAPSQQYLQLSNGVLTP 480

Query: 481 YGYGSLPSSTPMPPPPMPHMVSPVVPLTQQML-------QQPSPMIQTQQVPFTQQPLAP 540
           YGYGSLPSSTP+PPPPMPHMVSPVVPLTQQML       QQPSPMIQTQ VPFTQQPLAP
Sbjct: 481 YGYGSLPSSTPVPPPPMPHMVSPVVPLTQQMLQQTIPLAQQPSPMIQTQPVPFTQQPLAP 525

Query: 541 SFRPLQPPGMVYYGHPPPSQ 553
           SFRPLQPPGMVYYGHPPPSQ
Sbjct: 541 SFRPLQPPGMVYYGHPPPSQ 525

[Close]

BLAST of Carg14192 vs. ExPASy TrEMBL
Match: A0A5A7TML3 (Regulation of nuclear pre-mRNA domain-containing protein 1B OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G00170 PE=4 SV=1)

HSP 1 Score: 877.5 bits (2266), Expect = 3.0e-251
Identity = 479/560 (85.54%), Postives = 499/560 (89.11%), Query Frame = 0


Query: 1   MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMIQKVPL 60
           MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEM+QKVPL
Sbjct: 358 MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMVQKVPL 417

Query: 61  LYLANDILQNSKRKGNEFVTEFWKVLPAALKNVLENGDNHGKTVISRLVDIWEQRKVFGS 120
           LYLANDILQNSKRKGNEFVTEFWKVLP+ALK+VLENGD+HGK VISRLVDIWEQRKVFGS
Sbjct: 418 LYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLENGDSHGKNVISRLVDIWEQRKVFGS 477

Query: 121 RTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLCIGSAAEKIVSAFHLVLS 180
           RTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKL IGSAAEKIVSAFHLVLS
Sbjct: 478 RTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLSIGSAAEKIVSAFHLVLS 537

Query: 181 EYANEETEMTNCNSAVQRVRKMESDVDVACSMAKNPQRKKLAKELEEEESILKQCIEKLQ 240
           EY+NEETEMTNC SAVQRVRKME+DVD ACSMAKNPQRKKLAKELEEEES+LKQCIEKLQ
Sbjct: 538 EYSNEETEMTNCISAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESVLKQCIEKLQ 597

Query: 241 SGEASRMALISQLKEALHVQESELENIRTQMQVAQAQAEEARNMQNRLNDEGYVSKSSTS 300
           S EASR+ALISQLKEALHVQESELENIRTQMQVAQAQAEEA+NMQNRLNDEGY+SK+S +
Sbjct: 598 SVEASRLALISQLKEALHVQESELENIRTQMQVAQAQAEEAKNMQNRLNDEGYLSKTSIT 657

Query: 301 DSKAKAGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKNTGLTKANNGLT 360
           DS AK GQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAK+TGL        
Sbjct: 658 DSNAKMGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKHTGL-------- 717

Query: 361 VFTQNPMSSPANSILKPEAEDAKNTGVTKTNNGLNSFAPKPM-SSSNSILKPEALAIGSD 420
                                      TK NNGLN+FA KPM SS+NSI KPEA A+GSD
Sbjct: 718 ---------------------------TKNNNGLNAFASKPMRSSANSITKPEASAVGSD 777

Query: 421 PNVFMSMQPHPAPTNHSYQSVMVPQPTIQSQAHNSQAQYQMFPNAPSQQYLQLSNGVLTP 480
           PNVFMSMQP PAP NHSYQSVMVPQPT+QSQA NSQ QYQM P+APSQQYLQLSNGVLTP
Sbjct: 778 PNVFMSMQPLPAPANHSYQSVMVPQPTMQSQASNSQTQYQMLPSAPSQQYLQLSNGVLTP 837

Query: 481 YGYGSLPSSTPMPPPPMPHMVSPVVPLTQQML-------QQPSPMIQTQQVPFTQQPLAP 540
           YGYGSLP+STP+PPPPMPHMVSPVVPLTQQML       QQPSPMIQTQ VPFTQQPLAP
Sbjct: 838 YGYGSLPNSTPVPPPPMPHMVSPVVPLTQQMLQQTIPLAQQPSPMIQTQPVPFTQQPLAP 882

Query: 541 SFRPLQPPGMVYYGHPPPSQ 553
           SFRPLQPPGMVYYGHPPPSQ
Sbjct: 898 SFRPLQPPGMVYYGHPPPSQ 882

[Close]

BLAST of Carg14192 vs. ExPASy TrEMBL
Match: A0A1S3BWJ3 (regulation of nuclear pre-mRNA domain-containing protein 1B OS=Cucumis melo OX=3656 GN=LOC103494401 PE=4 SV=1)

HSP 1 Score: 877.5 bits (2266), Expect = 3.0e-251
Identity = 479/560 (85.54%), Postives = 499/560 (89.11%), Query Frame = 0


Query: 1   MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMIQKVPL 60
           MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEM+QKVPL
Sbjct: 1   MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMVQKVPL 60

Query: 61  LYLANDILQNSKRKGNEFVTEFWKVLPAALKNVLENGDNHGKTVISRLVDIWEQRKVFGS 120
           LYLANDILQNSKRKGNEFVTEFWKVLP+ALK+VLENGD+HGK VISRLVDIWEQRKVFGS
Sbjct: 61  LYLANDILQNSKRKGNEFVTEFWKVLPSALKDVLENGDSHGKNVISRLVDIWEQRKVFGS 120

Query: 121 RTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLCIGSAAEKIVSAFHLVLS 180
           RTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKL IGSAAEKIVSAFHLVLS
Sbjct: 121 RTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLSIGSAAEKIVSAFHLVLS 180

Query: 181 EYANEETEMTNCNSAVQRVRKMESDVDVACSMAKNPQRKKLAKELEEEESILKQCIEKLQ 240
           EY+NEETEMTNC SAVQRVRKME+DVD ACSMAKNPQRKKLAKELEEEES+LKQCIEKLQ
Sbjct: 181 EYSNEETEMTNCISAVQRVRKMENDVDFACSMAKNPQRKKLAKELEEEESVLKQCIEKLQ 240

Query: 241 SGEASRMALISQLKEALHVQESELENIRTQMQVAQAQAEEARNMQNRLNDEGYVSKSSTS 300
           S EASR+ALISQLKEALHVQESELENIRTQMQVAQAQAEEA+NMQNRLNDEGY+SK+S +
Sbjct: 241 SVEASRLALISQLKEALHVQESELENIRTQMQVAQAQAEEAKNMQNRLNDEGYLSKTSIT 300

Query: 301 DSKAKAGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKNTGLTKANNGLT 360
           DS AK GQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAK+TGL        
Sbjct: 301 DSNAKMGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKHTGL-------- 360

Query: 361 VFTQNPMSSPANSILKPEAEDAKNTGVTKTNNGLNSFAPKPM-SSSNSILKPEALAIGSD 420
                                      TK NNGLN+FA KPM SS+NSI KPEA A+GSD
Sbjct: 361 ---------------------------TKNNNGLNAFASKPMRSSANSITKPEASAVGSD 420

Query: 421 PNVFMSMQPHPAPTNHSYQSVMVPQPTIQSQAHNSQAQYQMFPNAPSQQYLQLSNGVLTP 480
           PNVFMSMQP PAP NHSYQSVMVPQPT+QSQA NSQ QYQM P+APSQQYLQLSNGVLTP
Sbjct: 421 PNVFMSMQPLPAPANHSYQSVMVPQPTMQSQASNSQTQYQMLPSAPSQQYLQLSNGVLTP 480

Query: 481 YGYGSLPSSTPMPPPPMPHMVSPVVPLTQQML-------QQPSPMIQTQQVPFTQQPLAP 540
           YGYGSLP+STP+PPPPMPHMVSPVVPLTQQML       QQPSPMIQTQ VPFTQQPLAP
Sbjct: 481 YGYGSLPNSTPVPPPPMPHMVSPVVPLTQQMLQQTIPLAQQPSPMIQTQPVPFTQQPLAP 525

Query: 541 SFRPLQPPGMVYYGHPPPSQ 553
           SFRPLQPPGMVYYGHPPPSQ
Sbjct: 541 SFRPLQPPGMVYYGHPPPSQ 525

[Close]

BLAST of Carg14192 vs. TAIR 10
Match: AT5G10060.1 (ENTH/VHS family protein )

HSP 1 Score: 425.6 bits (1093), Expect = 6.0e-119
Identity = 266/559 (47.58%), Postives = 349/559 (62.43%), Query Frame = 0


Query: 1   MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMIQKVPL 60
           M+SVFS+QIL DKL+KLNS+QQ IETLSHWCIF+R KAEL+V TW+KQFH++EM QKVPL
Sbjct: 1   MSSVFSDQILIDKLAKLNSSQQSIETLSHWCIFNRSKAELIVTTWEKQFHSTEMDQKVPL 60

Query: 61  LYLANDILQNSKRKGNEFVTEFWKVLPAALKNVLENGDNHGKTVISRLVDIWEQRKVFGS 120
           LYLANDILQNSKR+GNEFV EFW VLP ALK+++  GD++GK+ ++R++ IWE+R+VFGS
Sbjct: 61  LYLANDILQNSKRQGNEFVQEFWNVLPKALKDIVSQGDDNGKSAVARVIKIWEERRVFGS 120

Query: 121 RTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLC-IGSAAEKIVSAFHLVL 180
           R++SLKDV+LGE+ P PL+ SKKR R  +  KR+S+S RTKL   G  AEKI SA+HLV+
Sbjct: 121 RSKSLKDVMLGEDVPLPLDISKKRPRGSKSSKRESKSSRTKLASSGGVAEKIASAYHLVV 180

Query: 181 SEYANEETEMTNCNSAVQRVRKMESDVDVACSMAK-NPQRKKLAKELEEEESILKQCIEK 240
           +E +NEE EM  C SAV+R+RKME DV+ ACS AK NP+RK LAKELEEEE +L+QCIEK
Sbjct: 181 AENSNEEAEMNKCKSAVKRIRKMEKDVEEACSTAKDNPKRKSLAKELEEEEYLLRQCIEK 240

Query: 241 LQSGEASRMALISQLKEALHVQESELENIRTQMQVAQAQAEEARNMQNRLNDEGYVSKSS 300
           L+S + SR +L++QLK+AL  QESEL+N++ Q+QVA+ Q EEA+NMQ RLNDE Y SK +
Sbjct: 241 LKSVQGSRSSLVNQLKDALREQESELDNLKAQIQVAKEQTEEAQNMQKRLNDEDYTSKQT 300

Query: 301 T-------SDSKAKAGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKNTG 360
           T       ++   K+GQ  K + A+IAA     L AS+SS MIM SVLS+FAAE  K +G
Sbjct: 301 TAATTITETNDNTKSGQASKMTPASIAA----MLTASTSSHMIMQSVLSSFAAEATKTSG 360

Query: 361 LTKANNGLTVFTQNPMSSPANSILKPEAEDAKNTGVTKTNNGLNSFAPKPMSSSNSILKP 420
           L+K+ + + V                                                  
Sbjct: 361 LSKSESTVPV-------------------------------------------------- 420

Query: 421 EALAIGSDPNVFMSMQPHPAPTNHSYQSVMVPQPTIQSQAHNSQAQYQMFPNAPSQQYLQ 480
                              + TN S+ S        Q+Q   +Q QY + PN P  Q+L+
Sbjct: 421 -------------------SDTNASFPS----YNNSQNQTPTTQGQYHVIPNPPPPQFLK 466

Query: 481 LSNGVLTPYGYGSLPSSTP--MPPPPMPHMVSPVVPLTQQMLQQPSPMIQTQQVPFTQQP 540
               +  PY +G++P   P   PPPP PH++       Q  + Q +   Q+QQ P     
Sbjct: 481 -PPVMNNPYAFGNIPLMPPGLPPPPPPPHLIGN----QQPQIPQSNSAQQSQQGP----- 466

Query: 541 LAPSFRPLQPPGMVYYGHP 549
                   QPPG++YYG P
Sbjct: 541 ------TFQPPGIMYYGAP 466

[Close]

BLAST of Carg14192 vs. TAIR 10
Match: AT5G65180.1 (ENTH/VHS family protein )

HSP 1 Score: 411.8 bits (1057), Expect = 8.9e-115
Identity = 227/380 (59.74%), Postives = 297/380 (78.16%), Query Frame = 0


Query: 1   MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMIQKVPL 60
           M+S FSE+IL D L+KLNSTQQ I+TLS WCI HR +AELVV TW+KQFH++++ QKVPL
Sbjct: 1   MSSPFSEEILIDNLAKLNSTQQSIQTLSQWCIVHRSEAELVVTTWEKQFHSTQIGQKVPL 60

Query: 61  LYLANDILQNSKRKGNEFVTEFWKVLPAALKNVLENGDNHGKTVISRLVDIWEQRKVFGS 120
           LYLANDILQNSKR+GNEFV EFWKVLP ALK+++  GD++GK V+SRLV+IWE+R+VFGS
Sbjct: 61  LYLANDILQNSKRQGNEFVQEFWKVLPGALKDIVSLGDDYGKGVVSRLVNIWEERRVFGS 120

Query: 121 RTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLCIGSAAEKIVSAFHLVLS 180
           R++SLKDV+L EEAPPPL+ SKKR R  +  KRDS+S +TKL  G  +EKIVSAF+LV +
Sbjct: 121 RSKSLKDVMLSEEAPPPLDVSKKRFRGSKSAKRDSKSTKTKLSSGGVSEKIVSAFNLVRA 180

Query: 181 EYANEETEMTNCNSAVQRVRKMESDVDVACSMAKNPQRKKLAKELEEEESILKQCIEKLQ 240
           E +NEETEM  C SAV+R+RKME DV+ ACS AK+P+++ LAKELEEEE+IL+Q +EKL+
Sbjct: 181 ENSNEETEMNKCKSAVRRIRKMEKDVEDACSTAKDPRKESLAKELEEEENILRQSVEKLK 240

Query: 241 SGEASRMALISQLKEALHVQESELENIRTQMQVAQAQAEEARNMQNRLNDEGYVSKSSTS 300
           S E SR +L++ L+EAL  QESELEN+++Q+QVAQ Q EEA+NMQ RLN+E     +  +
Sbjct: 241 SVEESRTSLVNHLREALREQESELENLQSQIQVAQEQTEEAQNMQKRLNNE-----TPVN 300

Query: 301 DSKAKAGQTPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKNTGLTKANNGLT 360
           ++   +GQ+ K + A+IAA +A+ L +S++S MIM SVLS+FAAE  + +GLTK+N   T
Sbjct: 301 NNNGTSGQSAKITPASIAA-MAEMLTSSTNSSMIMHSVLSSFAAEATQTSGLTKSNTSDT 360

Query: 361 -VFTQNPMSSPANSILKPEA 380
             F   P     + I  P A
Sbjct: 361 NAFVVPPNPQQYHIIPNPAA 374

[Close]

BLAST of Carg14192 vs. TAIR 10
Match: AT5G65180.2 (ENTH/VHS family protein )

HSP 1 Score: 215.7 bits (548), Expect = 9.4e-56
Identity = 135/252 (53.57%), Postives = 183/252 (72.62%), Query Frame = 0


Query: 129 ILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLCIGSAAEKIVSAFHLVLSEYANEETE 188
           +L EEAPPPL+ SKKR R  +  KRDS+S +TKL  G  +EKIVSAF+LV +E +NEETE
Sbjct: 1   MLSEEAPPPLDVSKKRFRGSKSAKRDSKSTKTKLSSGGVSEKIVSAFNLVRAENSNEETE 60

Query: 189 MTNCNSAVQRVRKMESDVDVACSMAKNPQRKKLAKELEEEESILKQCIEKLQSGEASRMA 248
           M  C SAV+R+RKME DV+ ACS AK+P+++ LAKELEEEE+IL+Q +EKL+S E SR +
Sbjct: 61  MNKCKSAVRRIRKMEKDVEDACSTAKDPRKESLAKELEEEENILRQSVEKLKSVEESRTS 120

Query: 249 LISQLKEALHVQESELENIRTQMQVAQAQAEEARNMQNRLNDEGYVSKSSTSDSKAKAGQ 308
           L++ L+EAL  QESELEN+++Q+QVAQ Q EEA+NMQ RLN+E     +  +++   +GQ
Sbjct: 121 LVNHLREALREQESELENLQSQIQVAQEQTEEAQNMQKRLNNE-----TPVNNNNGTSGQ 180

Query: 309 TPKKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKNTGLTKANNGLT-VFTQNPM 368
           + K + A+IAA +A+ L +S++S MIM SVLS+FAAE  + +GLTK+N   T  F   P 
Sbjct: 181 SAKITPASIAA-MAEMLTSSTNSSMIMHSVLSSFAAEATQTSGLTKSNTSDTNAFVVPPN 240

Query: 369 SSPANSILKPEA 380
               + I  P A
Sbjct: 241 PQQYHIIPNPAA 246

[Close]

BLAST of Carg14192 vs. TAIR 10
Match: AT3G26990.1 (ENTH/VHS family protein )

HSP 1 Score: 213.4 bits (542), Expect = 4.6e-55
Identity = 184/537 (34.26%), Postives = 268/537 (49.91%), Query Frame = 0


Query: 1   MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRGKAELVVATWDKQFHNSEMIQKVPL 60
           M S F+ QIL +KL+KLN++Q  IETLSHWCIFH  KA+ VV TW +QFH +   Q++  
Sbjct: 1   MGSSFNAQILVEKLAKLNNSQASIETLSHWCIFHMNKAKHVVETWGRQFHCAPREQRLAY 60

Query: 61  LYLANDILQNSKRKGNEFVTEFWKVLPAALKNVLENGDNHGKTVISRLVDIWEQRKVFGS 120
           LYLANDILQNS+RKG+EFV EFWKVLP AL++++ENGD+ G+    RLV+IWE+RKVFGS
Sbjct: 61  LYLANDILQNSRRKGSEFVGEFWKVLPDALRDMIENGDDFGRKSARRLVNIWEERKVFGS 120

Query: 121 RTRSLKDVILGEEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLCIGSAAEKIVSAFHLVLS 180
           R + LK+ +LG +        +  TR+  +V     S+  +   GS  EK+VSA  ++  
Sbjct: 121 RGQILKEELLGRQ-------PENGTRNGNLVPL-KLSVPQRQVNGSTLEKVVSAVEVLHG 180

Query: 181 EYANEETEMTNCNSAVQRVRKMESDVDVACSMAKNPQRKKLAKELEEEESILKQCIEKLQ 240
              +E+  +    +A   + K   +V+   S    P    + KEL+ +  IL+ CIE+L 
Sbjct: 181 VQIDEDALVGKSTNAAGYLEKATQEVERDLSSGHAP-GPAVVKELQGQHVILRDCIEQLG 240

Query: 241 SGEASRMALISQLKEALHVQESELENIRTQMQVAQAQAEEARNMQNRLNDEGYVSKSSTS 300
           + E SR +LIS L+EAL  QE +LE +R  +Q+A+ Q++   ++  +L D G  S+   +
Sbjct: 241 AMETSRTSLISHLREALQEQELKLEQVRNHLQIARFQSDRTGDLCRQLLDHGGSSQPPAT 300

Query: 301 D-----------SKAKAGQT------------------------PKKSAAAIAAEVADKL 360
           +           S A A Q+                        P+K+A   AA V  KL
Sbjct: 301 EEEESKEVIKVSSTAAAPQSFTHSDVEQSAPVMFASNPTQSLEDPRKTA---AAAVVAKL 360

Query: 361 AASSSSQMIMTSVLSTFAAEEAKNTGLTKANNGLTVF-TQNPMSSPANSILKPEAEDAKN 420
            AS+SS  +++ VLS+ A+E     G+   NN   V  T + +  P     K +  D   
Sbjct: 361 TASTSSAEMLSYVLSSLASE-----GIIGNNNPPAVTETLSSVDFPPEKRPKLQNHDQSY 420

Query: 421 TGVTKTNNGLNSFAPKPMSSSNSILKPEALAIGSDPNVFMSMQPHPAPTNHSYQSVMVPQ 480
                 N    S +  P         P        P     +QP P P NH+  +  +  
Sbjct: 421 LSPHHQNTATTSSSTPPQP------LPPPPPFQLQPQFLQPLQP-PGPVNHTPFNYTIAT 480

Query: 481 PTIQSQAHNSQAQYQMFP--------NAPSQQYLQLSNGVLTPYGYGSLPSSTPMPP 494
            T  +Q    Q Q    P        +APS+   Q   G     G+  + SS P+ P
Sbjct: 481 STATTQ-QQQQEQGPWVPGLTQLSTTSAPSENSYQKFQG---QDGFYGINSSVPITP 509

The following BLAST results are available for this feature:

BLAST of Carg14192 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7031259.1	8.5e-301	100.00	Regulation of nuclear pre-mRNA domain-containing protein 1B [Cucurbita argyrospe...	[more]
XP_023547643.1	1.0e-298	99.28	regulation of nuclear pre-mRNA domain-containing protein 1B-like [Cucurbita pepo...	[more]
XP_022980133.1	6.7e-298	98.91	regulation of nuclear pre-mRNA domain-containing protein 1B-like [Cucurbita maxi...	[more]
XP_022942782.1	5.3e-295	98.55	regulation of nuclear pre-mRNA domain-containing protein 1B-like [Cucurbita mosc...	[more]
KAG6600625.1	6.8e-266	99.59	Regulation of nuclear pre-mRNA domain-containing protein 1B, partial [Cucurbita ...	[more]

BLAST of Carg14192 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CSU0	3.5e-23	30.03	Regulation of nuclear pre-mRNA domain-containing protein 1B OS=Mus musculus OX=1...	[more]
Q9NQG5	4.6e-23	30.03	Regulation of nuclear pre-mRNA domain-containing protein 1B OS=Homo sapiens OX=9...	[more]
Q0P5J9	2.8e-20	29.33	Regulation of nuclear pre-mRNA domain-containing protein 1A OS=Bos taurus OX=991...	[more]
Q96P16	2.8e-20	29.33	Regulation of nuclear pre-mRNA domain-containing protein 1A OS=Homo sapiens OX=9...	[more]
Q5R8Y3	2.8e-20	29.33	Regulation of nuclear pre-mRNA domain-containing protein 1A OS=Pongo abelii OX=9...	[more]

BLAST of Carg14192 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IYD8	3.2e-298	98.91	regulation of nuclear pre-mRNA domain-containing protein 1B-like OS=Cucurbita ma...	[more]
A0A6J1FR83	2.6e-295	98.55	regulation of nuclear pre-mRNA domain-containing protein 1B-like OS=Cucurbita mo...	[more]
A0A0A0KWH8	7.8e-252	85.89	CID domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G031050 PE=4 SV...	[more]
A0A5A7TML3	3.0e-251	85.54	Regulation of nuclear pre-mRNA domain-containing protein 1B OS=Cucumis melo var....	[more]
A0A1S3BWJ3	3.0e-251	85.54	regulation of nuclear pre-mRNA domain-containing protein 1B OS=Cucumis melo OX=3...	[more]

BLAST of Carg14192 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G10060.1	6.0e-119	47.58	ENTH/VHS family protein	[more]
AT5G65180.1	8.9e-115	59.74	ENTH/VHS family protein	[more]
AT5G65180.2	9.4e-56	53.57	ENTH/VHS family protein	[more]
AT3G26990.1	4.6e-55	34.26	ENTH/VHS family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 218..238
None	No IPR available	COILS	Coil	Coil	coord: 250..291
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 530..552
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 286..307
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 286..309
None	No IPR available	PANTHER	PTHR12460	CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN	coord: 1..549
None	No IPR available	PANTHER	PTHR12460:SF27	ENTH/VHS FAMILY PROTEIN	coord: 1..549
None	No IPR available	CDD	cd16981	CID_RPRD_like	coord: 7..121 e-value: 1.69149E-55 score: 180.855
IPR006569	CID domain	SMART	SM00582	558neu5	coord: 9..130 e-value: 7.8E-39 score: 145.0
IPR006569	CID domain	PFAM	PF04818	CID	coord: 9..121 e-value: 4.8E-32 score: 110.8
IPR006569	CID domain	PROSITE	PS51391	CID	coord: 2..134 score: 39.323795
IPR008942	ENTH/VHS	GENE3D	1.25.40.90		coord: 4..133 e-value: 2.8E-37 score: 129.8
IPR008942	ENTH/VHS	SUPERFAMILY	48464	ENTH/VHS domain	coord: 8..118

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg14192-RA	Carg14192-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006397	mRNA processing
molecular_function	GO:0003676	nucleic acid binding