Carg14154 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg14154
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	late embryogenesis abundant protein D-29-like
Location	Carg_Chr04: 4067173 .. 4067977 (+)
RNA-Seq Expression	Carg14154
Synteny	Carg14154

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGACAAGGACGTGGTCGTTTGTGGCGGTTTTGTGGCTGTTATGGGCGGCGGAGATGGGGGTGGTGGAAAAATGCAGGGGTGAAATAGGACAAGGGGCAATGAAGGATGTGAAGGATAATATCACTGAAATTATGGAGATGACGAATATTGAGGGAAAAGCAGAAGCCGTTAAGAAAGGTGCTTCTGAAGTGTTTAATGACGCCAAGGACGCAGCTGAGTCTTGGTCCAACTGGGCTTCCGCTCAGATTTCCAAGTAAATATTTATTGTGTTCTTGTTCCATGTTTTATTCTAAATCAACAATGTCGTGCCAAATTTTTAGGGTTTTTTTCTTCTTCTTTTTAACTAATTTAGGCTCAAATATTTATGTAGGGGATTAGGATTGGAAGAAGAAGGATTGAAACAGACAGCCCACCACATGATGGACTTAGCCGGCGACGCAGCCACAAAAACCACACACACAATCCACACAGCAGCTTCAGGTAATCAAACCGAATTTTCAAAACCCATTATTTAATGGTTATTTAATTGTGTTGTCCGTACATTTAGATGCATCTGACAAAGCCGGAGAGGCGGTGAAGGCGGTGTCGGATAAAGCCAGCGACGCCAAAACGAAGGCCAAAGACACGTTTGTGAACGGGAAAGAGAAGGCGGCGAAGGTGTATGAAGCGGCTAAAACCGAAGTGGAGCGGGAAGTTGCGGCGGTTAAGGAGTGTGTGAACTGTGAAGCTGCTAAAGAGATGGCGTCGCATGCCGCCGTACAAATCGGGGCGAAGATAAGGGAGAAGTCCTCGGAGCTGTGA

mRNA sequence

ATGGGGACAAGGACGTGGTCGTTTGTGGCGGTTTTGTGGCTGTTATGGGCGGCGGAGATGGGGGTGGTGGAAAAATGCAGGGGTGAAATAGGACAAGGGGCAATGAAGGATGTGAAGGATAATATCACTGAAATTATGGAGATGACGAATATTGAGGGAAAAGCAGAAGCCGTTAAGAAAGGTGCTTCTGAAGTGTTTAATGACGCCAAGGACGCAGCTGAGTCTTGGTCCAACTGGGCTTCCGCTCAGATTTCCAAGGGATTAGGATTGGAAGAAGAAGGATTGAAACAGACAGCCCACCACATGATGGACTTAGCCGGCGACGCAGCCACAAAAACCACACACACAATCCACACAGCAGCTTCAGATGCATCTGACAAAGCCGGAGAGGCGGTGAAGGCGGTGTCGGATAAAGCCAGCGACGCCAAAACGAAGGCCAAAGACACGTTTGTGAACGGGAAAGAGAAGGCGGCGAAGGTGTATGAAGCGGCTAAAACCGAAGTGGAGCGGGAAGTTGCGGCGGTTAAGGAGTGTGTGAACTGTGAAGCTGCTAAAGAGATGGCGTCGCATGCCGCCGTACAAATCGGGGCGAAGATAAGGGAGAAGTCCTCGGAGCTGTGA

Coding sequence (CDS)

ATGGGGACAAGGACGTGGTCGTTTGTGGCGGTTTTGTGGCTGTTATGGGCGGCGGAGATGGGGGTGGTGGAAAAATGCAGGGGTGAAATAGGACAAGGGGCAATGAAGGATGTGAAGGATAATATCACTGAAATTATGGAGATGACGAATATTGAGGGAAAAGCAGAAGCCGTTAAGAAAGGTGCTTCTGAAGTGTTTAATGACGCCAAGGACGCAGCTGAGTCTTGGTCCAACTGGGCTTCCGCTCAGATTTCCAAGGGATTAGGATTGGAAGAAGAAGGATTGAAACAGACAGCCCACCACATGATGGACTTAGCCGGCGACGCAGCCACAAAAACCACACACACAATCCACACAGCAGCTTCAGATGCATCTGACAAAGCCGGAGAGGCGGTGAAGGCGGTGTCGGATAAAGCCAGCGACGCCAAAACGAAGGCCAAAGACACGTTTGTGAACGGGAAAGAGAAGGCGGCGAAGGTGTATGAAGCGGCTAAAACCGAAGTGGAGCGGGAAGTTGCGGCGGTTAAGGAGTGTGTGAACTGTGAAGCTGCTAAAGAGATGGCGTCGCATGCCGCCGTACAAATCGGGGCGAAGATAAGGGAGAAGTCCTCGGAGCTGTGA

Protein sequence

MGTRTWSFVAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKKGASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTAHHMMDLAGDAATKTTHTIHTAASDASDKAGEAVKAVSDKASDAKTKAKDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAAKEMASHAAVQIGAKIREKSSEL

Homology

[Close]

BLAST of Carg14154 vs. NCBI nr
Match: KAG6600582.1 (hypothetical protein SDJN03_05815, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031222.1 hypothetical protein SDJN02_05262, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 385.2 bits (988), Expect = 3.6e-103
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 1   MGTRTWSFVAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKK 60
           MGTRTWSFVAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKK
Sbjct: 1   MGTRTWSFVAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKK 60

Query: 61  GASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTAHHMMDLAGDAATKTTHTIHTA 120
           GASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTAHHMMDLAGDAATKTTHTIHTA
Sbjct: 61  GASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTAHHMMDLAGDAATKTTHTIHTA 120

Query: 121 ASDASDKAGEAVKAVSDKASDAKTKAKDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVN 180
           ASDASDKAGEAVKAVSDKASDAKTKAKDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVN
Sbjct: 121 ASDASDKAGEAVKAVSDKASDAKTKAKDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVN 180

Query: 181 CEAAKEMASHAAVQIGAKIREKSSEL 207
           CEAAKEMASHAAVQIGAKIREKSSEL
Sbjct: 181 CEAAKEMASHAAVQIGAKIREKSSEL 206

[Close]

BLAST of Carg14154 vs. NCBI nr
Match: XP_022942848.1 (late embryogenesis abundant protein D-29-like [Cucurbita moschata])

HSP 1 Score: 376.7 bits (966), Expect = 1.3e-100
Identity = 203/206 (98.54%), Postives = 203/206 (98.54%), Query Frame = 0


Query: 1   MGTRTWSFVAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKK 60
           MGT TWSFVAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKK
Sbjct: 1   MGTSTWSFVAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKK 60

Query: 61  GASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTAHHMMDLAGDAATKTTHTIHTA 120
           GASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTAHHMMD AGDAATKTTHTI TA
Sbjct: 61  GASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTAHHMMDKAGDAATKTTHTIGTA 120

Query: 121 ASDASDKAGEAVKAVSDKASDAKTKAKDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVN 180
           ASDASDKAGEAVKAVSDKASDAKTKAKDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVN
Sbjct: 121 ASDASDKAGEAVKAVSDKASDAKTKAKDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVN 180

Query: 181 CEAAKEMASHAAVQIGAKIREKSSEL 207
           CEAAKEMASHAAVQIGAKIREKSSEL
Sbjct: 181 CEAAKEMASHAAVQIGAKIREKSSEL 206

[Close]

BLAST of Carg14154 vs. NCBI nr
Match: XP_023533965.1 (uncharacterized protein LOC111795650 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 355.1 bits (910), Expect = 4.0e-94
Identity = 192/206 (93.20%), Postives = 200/206 (97.09%), Query Frame = 0


Query: 1   MGTRTWSFVAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKK 60
           MGT TWSFVAVLWLL AAEMGVVEKCRG +G+GAM+DVKDNITEIMEMTN+EGKAEAVKK
Sbjct: 1   MGTSTWSFVAVLWLLLAAEMGVVEKCRGGMGRGAMEDVKDNITEIMEMTNLEGKAEAVKK 60

Query: 61  GASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTAHHMMDLAGDAATKTTHTIHTA 120
           GASEVFNDAKDAAES SNWASA+I+KGLGLEEEGLKQTAHHMMD AGDAATKTTHTIHTA
Sbjct: 61  GASEVFNDAKDAAESLSNWASAEIAKGLGLEEEGLKQTAHHMMDKAGDAATKTTHTIHTA 120

Query: 121 ASDASDKAGEAVKAVSDKASDAKTKAKDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVN 180
           ASDASDKAGEAVKAVSDKAS+AKTKAKDTF+NGKEKAAKVYEAAKTEVEREVAAVKECVN
Sbjct: 121 ASDASDKAGEAVKAVSDKASNAKTKAKDTFLNGKEKAAKVYEAAKTEVEREVAAVKECVN 180

Query: 181 CEAAKEMASHAAVQIGAKIREKSSEL 207
           CEAAKE ASHAAVQIGAKIREKSSEL
Sbjct: 181 CEAAKERASHAAVQIGAKIREKSSEL 206

[Close]

BLAST of Carg14154 vs. NCBI nr
Match: XP_022983013.1 (late embryogenesis abundant protein D-29-like [Cucurbita maxima])

HSP 1 Score: 292.0 bits (746), Expect = 4.1e-75
Identity = 161/206 (78.16%), Postives = 167/206 (81.07%), Query Frame = 0


Query: 1   MGTRTWSFVAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKK 60
           MGT TWSFVAVLWLLWA EMGVVEKCRGEIGQGA+KDVKDNITEI EM N++GKAEA+KK
Sbjct: 1   MGTSTWSFVAVLWLLWAVEMGVVEKCRGEIGQGAVKDVKDNITEITEMANLDGKAEALKK 60

Query: 61  GASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTAHHMMDLAGDAATKTTHTIHTA 120
           GASEVFNDAKDAAESWSNWASA+ISKGLGLEEEGLKQTAHHMM                 
Sbjct: 61  GASEVFNDAKDAAESWSNWASAEISKGLGLEEEGLKQTAHHMM----------------- 120

Query: 121 ASDASDKAGEAVKAVSDKASDAKTKAKDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVN 180
                           DKA DAKTKAK+T VNGKEKAAKVYEAAKTEVEREVAAVKECVN
Sbjct: 121 ----------------DKAGDAKTKAKETLVNGKEKAAKVYEAAKTEVEREVAAVKECVN 173

Query: 181 CEAAKEMASHAAVQIGAKIREKSSEL 207
           CEAAKEMASHAAVQIGAKIREKSSEL
Sbjct: 181 CEAAKEMASHAAVQIGAKIREKSSEL 173

[Close]

BLAST of Carg14154 vs. NCBI nr
Match: XP_038906279.1 (late embryogenesis abundant protein D-29 isoform X2 [Benincasa hispida])

HSP 1 Score: 207.2 bits (526), Expect = 1.3e-49
Identity = 130/226 (57.52%), Postives = 163/226 (72.12%), Query Frame = 0


Query: 3   TRTWSFVAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKKGA 62
           T   S VAV+WLL      V +KCRG +G+ A++DVKDN++EI + T+++ KAEAVK GA
Sbjct: 4   TSMLSVVAVVWLLL-----VADKCRG-MGEEALQDVKDNVSEITKDTSLDEKAEAVKSGA 63

Query: 63  SEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTAHHMMDLAGDAATKTTHTIHTAAS 122
           S+VF+DAK+ AESWSNWA  +ISKGLG   E LK+TAH+++D AGDAATKTT  + TAAS
Sbjct: 64  SDVFHDAKENAESWSNWAYGKISKGLGFNGEELKETAHYVVDKAGDAATKTTEKVSTAAS 123

Query: 123 D----ASDKAGEAVKAVSD------------------KASDAKTKAKDTFVNGKEKAAKV 182
           D    AS+KAGEAVKA SD                  KASD KTKAK+T V+GK+KAA+V
Sbjct: 124 DASNYASEKAGEAVKAASDAAGNLKSKSGDVIGTATEKASDIKTKAKETLVDGKDKAAEV 183

Query: 183 YEAAKTEVEREVAAVKECVNCEAAKEMASHAAVQIGAKIREKSSEL 207
           YEAAK EV ++  A KE VNC AAKEMAS +A +IG +IREK++EL
Sbjct: 184 YEAAKNEVGQKFKAAKENVNCVAAKEMASKSAGEIGYRIREKTAEL 223

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BLAST of Carg14154 vs. ExPASy Swiss-Prot
Match: P13940 (Late embryogenesis abundant protein D-29 OS=Gossypium hirsutum OX=3635 PE=3 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 1.8e-04
Identity = 50/167 (29.94%), Postives = 77/167 (46.11%), Query Frame = 0


Query: 51  IEGKAEAVKKGASEVFNDAKDAAESWSNWASAQISKGLGL-EEEGLKQTAHHMMDLAGDA 110
           ++   +  K  ASEV  +AK+  ESW+ WA  +IS+GLG  +++  K +     D   D 
Sbjct: 72  VKSNTQQAKDRASEVGKEAKEYTESWTEWAKEKISEGLGFKQDDDPKGSVEKAFDSVADT 131

Query: 111 ATKTTHTIHTAAS--------DASDKAGEAVKAVSDKASDAKTKAKDTFVNGKEKAAKVY 170
           ATKT   +   AS         A D    A K   D  + AK K+ +      EKA ++ 
Sbjct: 132 ATKTKDKLQDMASGAGEYSAGKAKDMKDTAYKKTDDVKNAAKGKSSEMRQATTEKARELA 191

Query: 171 EAAKTEVEREVAAVKECVN--CEAAKEMASHAAVQIGAKIREKSSEL 207
           ++AK        A KE V    +   EM + A  + GA+  E++ E+
Sbjct: 192 DSAKENANTAYIAAKEKVRDMADRTSEMTNEAQ-ERGARKAEEAKEV 237

[Close]

BLAST of Carg14154 vs. ExPASy TrEMBL
Match: A0A6J1FVT6 (late embryogenesis abundant protein D-29-like OS=Cucurbita moschata OX=3662 GN=LOC111447755 PE=4 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 6.2e-101
Identity = 203/206 (98.54%), Postives = 203/206 (98.54%), Query Frame = 0


Query: 1   MGTRTWSFVAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKK 60
           MGT TWSFVAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKK
Sbjct: 1   MGTSTWSFVAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKK 60

Query: 61  GASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTAHHMMDLAGDAATKTTHTIHTA 120
           GASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTAHHMMD AGDAATKTTHTI TA
Sbjct: 61  GASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTAHHMMDKAGDAATKTTHTIGTA 120

Query: 121 ASDASDKAGEAVKAVSDKASDAKTKAKDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVN 180
           ASDASDKAGEAVKAVSDKASDAKTKAKDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVN
Sbjct: 121 ASDASDKAGEAVKAVSDKASDAKTKAKDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVN 180

Query: 181 CEAAKEMASHAAVQIGAKIREKSSEL 207
           CEAAKEMASHAAVQIGAKIREKSSEL
Sbjct: 181 CEAAKEMASHAAVQIGAKIREKSSEL 206

[Close]

BLAST of Carg14154 vs. ExPASy TrEMBL
Match: A0A6J1J6J8 (late embryogenesis abundant protein D-29-like OS=Cucurbita maxima OX=3661 GN=LOC111481681 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 2.0e-75
Identity = 161/206 (78.16%), Postives = 167/206 (81.07%), Query Frame = 0


Query: 1   MGTRTWSFVAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKK 60
           MGT TWSFVAVLWLLWA EMGVVEKCRGEIGQGA+KDVKDNITEI EM N++GKAEA+KK
Sbjct: 1   MGTSTWSFVAVLWLLWAVEMGVVEKCRGEIGQGAVKDVKDNITEITEMANLDGKAEALKK 60

Query: 61  GASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTAHHMMDLAGDAATKTTHTIHTA 120
           GASEVFNDAKDAAESWSNWASA+ISKGLGLEEEGLKQTAHHMM                 
Sbjct: 61  GASEVFNDAKDAAESWSNWASAEISKGLGLEEEGLKQTAHHMM----------------- 120

Query: 121 ASDASDKAGEAVKAVSDKASDAKTKAKDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVN 180
                           DKA DAKTKAK+T VNGKEKAAKVYEAAKTEVEREVAAVKECVN
Sbjct: 121 ----------------DKAGDAKTKAKETLVNGKEKAAKVYEAAKTEVEREVAAVKECVN 173

Query: 181 CEAAKEMASHAAVQIGAKIREKSSEL 207
           CEAAKEMASHAAVQIGAKIREKSSEL
Sbjct: 181 CEAAKEMASHAAVQIGAKIREKSSEL 173

[Close]

BLAST of Carg14154 vs. ExPASy TrEMBL
Match: A0A0A0KUJ5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G046680 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 9.3e-41
Identity = 117/222 (52.70%), Postives = 151/222 (68.02%), Query Frame = 0


Query: 1   MGTRTWSF-VAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVK 60
           MG +T +  VAV+WL+      V EKC G  G+ A+KDVK+N++EI E  N++ KAEAVK
Sbjct: 1   MGRKTRTLVVAVVWLVL-----VAEKCSG-FGEEAVKDVKNNMSEIAEGANLDEKAEAVK 60

Query: 61  KGASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTAHHMMDLAGDAATKTTHTIHT 120
             ASEV+ +AKD  ESWSNWA  +IS+GLGL EE +K+TAH++ D AGDAA KTT  I+T
Sbjct: 61  SKASEVYTEAKDKTESWSNWAYNKISRGLGLNEEEIKETAHNVADKAGDAAIKTTEKINT 120

Query: 121 AASD----ASDKAGEAVKAVSDKASDAKTKA-----------KDTFVNGKEKAAKVYEAA 180
           AASD    AS+KAGEA KA S+ AS  K+K+           K+T V+GK+KAA++YEAA
Sbjct: 121 AASDASNYASEKAGEAAKAASEAASKLKSKSEGVVGPAAEKVKETLVSGKDKAAEMYEAA 180

Query: 181 KTEVEREVAAVKECVNCEAAKEMASHAAVQIGAKIREKSSEL 207
           K          K+  NCE A+EMAS  A +IG +IREKS+EL
Sbjct: 181 KE---------KKNENCETAREMASKTAGEIGCRIREKSAEL 207

[Close]

BLAST of Carg14154 vs. ExPASy TrEMBL
Match: A0A5A7TSE6 (Late embryogenesis abundant protein D-29-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G004980 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 6.1e-40
Identity = 118/222 (53.15%), Postives = 152/222 (68.47%), Query Frame = 0


Query: 1   MGTRTWSF-VAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVK 60
           MG +T +  VAV+WL+      V EKC G  G+ A++DVKDN++EI E   ++ KAEAVK
Sbjct: 1   MGRKTATLVVAVVWLVL-----VAEKCSG-YGE-AVRDVKDNVSEIAEDAKLDEKAEAVK 60

Query: 61  KGASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTAHHMMDLAGDAATKTTHTIHT 120
             ASEV++DAKD AESWSNWA  +ISKGLGL E+ LK+TAH++ D AGDAA KTT  I+T
Sbjct: 61  STASEVYSDAKDKAESWSNWAYDKISKGLGLSEKELKETAHNVADKAGDAAIKTTEKINT 120

Query: 121 AASD----ASDKAGEAVKAVSDKASDAKTKA-----------KDTFVNGKEKAAKVYEAA 180
           AAS     AS+KAGEA KA S+ AS+ K+K+           K+T V+GK+KAA+VYEAA
Sbjct: 121 AASGASNYASEKAGEAAKAASEAASNLKSKSGDVVGTATEKVKETLVSGKDKAAEVYEAA 180

Query: 181 KTEVEREVAAVKECVNCEAAKEMASHAAVQIGAKIREKSSEL 207
           K          K+  NCE A+EMAS  A +IG +IREK++EL
Sbjct: 181 KE---------KKKENCETAREMASKTAEEIGCRIREKTAEL 206

[Close]

BLAST of Carg14154 vs. ExPASy TrEMBL
Match: A0A1S3BT31 (late embryogenesis abundant protein D-29-like OS=Cucumis melo OX=3656 GN=LOC103493195 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 6.1e-40
Identity = 118/222 (53.15%), Postives = 152/222 (68.47%), Query Frame = 0


Query: 1   MGTRTWSF-VAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVK 60
           MG +T +  VAV+WL+      V EKC G  G+ A++DVKDN++EI E   ++ KAEAVK
Sbjct: 1   MGRKTATLVVAVVWLVL-----VAEKCSG-YGE-AVRDVKDNVSEIAEDAKLDEKAEAVK 60

Query: 61  KGASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTAHHMMDLAGDAATKTTHTIHT 120
             ASEV++DAKD AESWSNWA  +ISKGLGL E+ LK+TAH++ D AGDAA KTT  I+T
Sbjct: 61  STASEVYSDAKDKAESWSNWAYDKISKGLGLSEKELKETAHNVADKAGDAAIKTTEKINT 120

Query: 121 AASD----ASDKAGEAVKAVSDKASDAKTKA-----------KDTFVNGKEKAAKVYEAA 180
           AAS     AS+KAGEA KA S+ AS+ K+K+           K+T V+GK+KAA+VYEAA
Sbjct: 121 AASGASNYASEKAGEAAKAASEAASNLKSKSGDVVGTATEKVKETLVSGKDKAAEVYEAA 180

Query: 181 KTEVEREVAAVKECVNCEAAKEMASHAAVQIGAKIREKSSEL 207
           K          K+  NCE A+EMAS  A +IG +IREK++EL
Sbjct: 181 KE---------KKKENCETAREMASKTAEEIGCRIREKTAEL 206

The following BLAST results are available for this feature:

BLAST of Carg14154 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6600582.1	3.6e-103	100.00	hypothetical protein SDJN03_05815, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022942848.1	1.3e-100	98.54	late embryogenesis abundant protein D-29-like [Cucurbita moschata]	[more]
XP_023533965.1	4.0e-94	93.20	uncharacterized protein LOC111795650 [Cucurbita pepo subsp. pepo]	[more]
XP_022983013.1	4.1e-75	78.16	late embryogenesis abundant protein D-29-like [Cucurbita maxima]	[more]
XP_038906279.1	1.3e-49	57.52	late embryogenesis abundant protein D-29 isoform X2 [Benincasa hispida]	[more]

BLAST of Carg14154 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P13940	1.8e-04	29.94	Late embryogenesis abundant protein D-29 OS=Gossypium hirsutum OX=3635 PE=3 SV=1	[more]

BLAST of Carg14154 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FVT6	6.2e-101	98.54	late embryogenesis abundant protein D-29-like OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1J6J8	2.0e-75	78.16	late embryogenesis abundant protein D-29-like OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A0A0KUJ5	9.3e-41	52.70	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G046680 PE=4 SV=1	[more]
A0A5A7TSE6	6.1e-40	53.15	Late embryogenesis abundant protein D-29-like OS=Cucumis melo var. makuwa OX=119...	[more]
A0A1S3BT31	6.1e-40	53.15	late embryogenesis abundant protein D-29-like OS=Cucumis melo OX=3656 GN=LOC1034...	[more]

BLAST of Carg14154 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 151..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg14154-RA	Carg14154-RA	mRNA