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Carg14150 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGCCAAGAGCTCGCCACTGTCTGCACCAATCTAAGTGAAAGGAAAAAGCGAGGGCCGCGCCACCGTTTCTATCACCGGCTGCCAAGATAGATTCCGATCGCAAGCGGAAGAAATCGGCTTCTTCGATCTCCTCTGCAGATCGATCTGCGAAGGAAAAGCGTAGCAGCAGCAAGAAGAACAAGATGTCCTCTTCGGCGGCCGCAGGTCAGGTTAGGGCATCGCACATACTCATAAAGCACCAAGGTTCTCGACGGCCTGCTTCGTGGAAGGATCCGGAAGGCCGAATTATCAAGAACACCACTCGCGACAGCGCCGTCTCTCAGCTTACTGTTATTCGAGACGACATCATTTCCGGCAAGTCCAAGTTTGAAGACGTTGCCTCTCGCATCTCTGACTGCAGCTCTGCCAAGCGTGGCGGCGATCTAGGTCCGCATACTGATCTCATTTCTTTATTATCTTGATTTTTCTGGCCATTACGTAGAGTAATTGTTTCTTTTTGTTTGCCATTTCTGGTCGGATTTGTGTAGTTTTCAGTCCGGAATTAGATAGGATTCACTTTATCATGAATTGAACCTGGAACCCTAGACTTAACCGTGAGGGATCTTAGTGTTTGGATTGCGGTATTGCTAGTTCGAGATATTAGATTTAGGTTTTAGTTCAATGAATTTTATTTACAGGGAGGATATCTATGTATCGCTTGGATTCAATTGGAGATGTGTGTCTATTGTATTTACTTATTTGCTTCGTGTAAGATTTGGAATTCTTCTTGTTTTGGTTTGAATTGAAATAGTACAGGATACTATCGTGTATGATTATTCCCTGCCGCTCTCGGATACCAAACATAATTTGTTGAATTGTGGTCTATGATTGAGGAACTTTGTTATACCTCAATTTCTAAGTTGAATTTCACTTTATGAAAAAACTATAATGATAATGCTCAAACAATTATCACAAAGTCGTGATTACTTTTGGACTTTGCGATGAAGTTGTGTGATACCGTGATGAATATAACCATTTATGTTTGACCATTTTACTTGAAAACCGATGAAAGGATTACTTACTCAGTACTTGATTTTAGCTAAATGGTTAAATCAACCATTCAATCGGAATATCCGTTTAGAGCCTCTCATATATTGGTAAAAAGTGAGAACATCAACACTTTGAAAGTGTCGCTATCAAGAAAATTTCTACCTGCTGGTGTGGAGACTTTTTTGCTCCAGTAAATACTTTAGATTTAATAATTCCATGAGATCTAGGAACTTAGCTTTGGAAATCGAAGGGAGAGGTGGAGATGTAGCAATAGTTTTACTTGTTAGTAATATTTCACTATAATCTGGTATAATCAGACCCACACATCAAAAGAATTAAAACAACAAAATTTGAACAACCCTTTCTGGTAAAATTGGTTCTATCTAGGATTGCAGTTCTCTTTTCCCCCACTGAAATGTATACTTCGTTAGTGTAGATGGAGCCATAATTTTTCATGGGGAGAGGCGAACTCTTAGCTTCCAACTTTTCATATATATGAAATAAATTTCCAATTCTAAACATTTAGTAGAGAAAATTTGAGAGAAAAATTATAAATCGAACTTTGTATACAACTTTTTAAATCTAAAATGAACCCAGCCCTCCTCTTTCTGCTCCACCCCTGGTTGTCTCTTGCTAGAAATTTGTAGTTGTGTACTCTCCTTCCAAGCCCGATTAGTAAAATCCCAGAGAGTAATTGTGTTCGGTAGTTCAATAGCAGGTACATTTGGACATTTTCTAGGATCACAAGGATATGTTATGATATTTTGTTCGTAAGCAAGCTGATATTTTATTCTAGCAATTGTATTTGTGTGGATTAGCACAATGTAGAATGCGTCTAAATGAGCAACACACTGACGTTATTGCAGGTCCTTTTGGGCGTGGCCAGATGCAGAAGCCTTTTGAAGAAGCAACATTTGCCCTCAAGGTTGGAGAGGTAAGCGACATTGTGGACACTGACAGTGGAGTTCACATCATCAAGCGGACTGCTTAAATTCTCTCATAAATCCTCCTTATTGAAGCATTTAATCTATTTGGCTGAAGTTATTCGAGAAGGATTTGGTTCTACTCCAGGCGACACGAATTTGTTGCTATGCTCTTGATAGTACAGGACAATTCATGTTGTGATTTGGCTATAGCTACTCTGTTTCAGTCCTAAGAATTTTCTTGAAGTTCGATGCTTTTATGCCATTGAATTTTTGGCTCTGTAAACGTGACAGTTATTTGCGTTCAAGTGGTTGTGATTTGAATTGTTTGCGTCTTTTATTACGCCTCATTTGTCTGCTCAACCTCCTAGGATTATTGGGTAGGAAATGGGAATTTTTTCTGAAACGTTTTTCTTTTGGAAACTTTCTTTTTATTACTTTTTCATGGTTTATTAAGTTTTAGGTTTTAAAAAACGAAGTTTTATTTGGGGCCAAGCAGATTGTGAAGTTAGCGTCTTAGGGTTCTTGAGCTTTTAAAATGTACAGGAAGTTTGAAACTTTTGTG TGCCAAGAGCTCGCCACTGTCTGCACCAATCTAAGTGAAAGGAAAAAGCGAGGGCCGCGCCACCGTTTCTATCACCGGCTGCCAAGATAGATTCCGATCGCAAGCGGAAGAAATCGGCTTCTTCGATCTCCTCTGCAGATCGATCTGCGAAGGAAAAGCGTAGCAGCAGCAAGAAGAACAAGATGTCCTCTTCGGCGGCCGCAGGTCAGGTTAGGGCATCGCACATACTCATAAAGCACCAAGGTTCTCGACGGCCTGCTTCGTGGAAGGATCCGGAAGGCCGAATTATCAAGAACACCACTCGCGACAGCGCCGTCTCTCAGCTTACTGTTATTCGAGACGACATCATTTCCGGCAAGTCCAAGTTTGAAGACGTTGCCTCTCGCATCTCTGACTGCAGCTCTGCCAAGCGTGGCGGCGATCTAGGTCCTTTTGGGCGTGGCCAGATGCAGAAGCCTTTTGAAGAAGCAACATTTGCCCTCAAGGTTGGAGAGGTAAGCGACATTGTGGACACTGACAGTGGAGTTCACATCATCAAGCGGACTGCTTAAATTCTCTCATAAATCCTCCTTATTGAAGCATTTAATCTATTTGGCTGAAGTTATTCGAGAAGGATTTGGTTCTACTCCAGGCGACACGAATTTGTTGCTATGCTCTTGATAGTACAGGACAATTCATGTTGTGATTTGGCTATAGCTACTCTGTTTCAGTCCTAAGAATTTTCTTGAAGTTCGATGCTTTTATGCCATTGAATTTTTGGCTCTGTAAACGTGACAGTTATTTGCGTTCAAGTGGTTGTGATTTGAATTGTTTGCGTCTTTTATTACGCCTCATTTGTCTGCTCAACCTCCTAGGATTATTGGGTAGGAAATGGGAATTTTTTCTGAAACGTTTTTCTTTTGGAAACTTTCTTTTTATTACTTTTTCATGGTTTATTAAGTTTTAGGTTTTAAAAAACGAAGTTTTATTTGGGGCCAAGCAGATTGTGAAGTTAGCGTCTTAGGGTTCTTGAGCTTTTAAAATGTACAGGAAGTTTGAAACTTTTGTG ATGTCCTCTTCGGCGGCCGCAGGTCAGGTTAGGGCATCGCACATACTCATAAAGCACCAAGGTTCTCGACGGCCTGCTTCGTGGAAGGATCCGGAAGGCCGAATTATCAAGAACACCACTCGCGACAGCGCCGTCTCTCAGCTTACTGTTATTCGAGACGACATCATTTCCGGCAAGTCCAAGTTTGAAGACGTTGCCTCTCGCATCTCTGACTGCAGCTCTGCCAAGCGTGGCGGCGATCTAGGTCCTTTTGGGCGTGGCCAGATGCAGAAGCCTTTTGAAGAAGCAACATTTGCCCTCAAGGTTGGAGAGGTAAGCGACATTGTGGACACTGACAGTGGAGTTCACATCATCAAGCGGACTGCTTAA MSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKSKFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKRTA Homology
BLAST of Carg14150 vs. NCBI nr
Match: XP_022943036.1 (peptidyl-prolyl cis-trans isomerase Pin1 [Cucurbita moschata] >XP_022983413.1 peptidyl-prolyl cis-trans isomerase Pin1 [Cucurbita maxima] >XP_023516756.1 peptidyl-prolyl cis-trans isomerase Pin1 [Cucurbita pepo subsp. pepo] >KAG6600578.1 Peptidyl-prolyl cis-trans isomerase Pin1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031218.1 Peptidyl-prolyl cis-trans isomerase Pin1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 238.0 bits (606), Expect = 4.2e-59 Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0
BLAST of Carg14150 vs. NCBI nr
Match: XP_022984600.1 (peptidyl-prolyl cis-trans isomerase Pin1-like [Cucurbita maxima] >XP_023552613.1 peptidyl-prolyl cis-trans isomerase Pin1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 234.2 bits (596), Expect = 6.0e-58 Identity = 120/122 (98.36%), Postives = 121/122 (99.18%), Query Frame = 0
BLAST of Carg14150 vs. NCBI nr
Match: XP_038878149.1 (peptidyl-prolyl cis-trans isomerase Pin1 [Benincasa hispida]) HSP 1 Score: 232.3 bits (591), Expect = 2.3e-57 Identity = 118/122 (96.72%), Postives = 119/122 (97.54%), Query Frame = 0
BLAST of Carg14150 vs. NCBI nr
Match: XP_022929403.1 (peptidyl-prolyl cis-trans isomerase Pin1-like [Cucurbita moschata]) HSP 1 Score: 231.1 bits (588), Expect = 5.1e-57 Identity = 118/122 (96.72%), Postives = 120/122 (98.36%), Query Frame = 0
BLAST of Carg14150 vs. NCBI nr
Match: KAG6577212.1 (Peptidyl-prolyl cis-trans isomerase Pin1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015303.1 Peptidyl-prolyl cis-trans isomerase Pin1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 231.1 bits (588), Expect = 5.1e-57 Identity = 118/122 (96.72%), Postives = 120/122 (98.36%), Query Frame = 0
BLAST of Carg14150 vs. ExPASy Swiss-Prot
Match: Q94G00 (Peptidyl-prolyl cis-trans isomerase Pin1 OS=Malus domestica OX=3750 GN=PIN1 PE=2 SV=1) HSP 1 Score: 206.8 bits (525), Expect = 1.4e-52 Identity = 102/119 (85.71%), Postives = 112/119 (94.12%), Query Frame = 0
BLAST of Carg14150 vs. ExPASy Swiss-Prot
Match: Q9SL42 (Peptidyl-prolyl cis-trans isomerase Pin1 OS=Arabidopsis thaliana OX=3702 GN=PIN1 PE=1 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 1.5e-48 Identity = 94/118 (79.66%), Postives = 108/118 (91.53%), Query Frame = 0
BLAST of Carg14150 vs. ExPASy Swiss-Prot
Match: Q9LEK8 (Peptidyl-prolyl cis-trans isomerase Pin1 OS=Digitalis lanata OX=49450 GN=PARV12.8 PE=1 SV=1) HSP 1 Score: 180.3 bits (456), Expect = 1.4e-44 Identity = 88/113 (77.88%), Postives = 99/113 (87.61%), Query Frame = 0
BLAST of Carg14150 vs. ExPASy Swiss-Prot
Match: P0C1J8 (Peptidyl-prolyl cis-trans isomerase pin1 OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) OX=246409 GN=pin1 PE=3 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 6.3e-26 Identity = 64/114 (56.14%), Postives = 82/114 (71.93%), Query Frame = 0
BLAST of Carg14150 vs. ExPASy Swiss-Prot
Match: Q9QUR7 (Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 OS=Mus musculus OX=10090 GN=Pin1 PE=1 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 8.3e-26 Identity = 60/113 (53.10%), Postives = 79/113 (69.91%), Query Frame = 0
BLAST of Carg14150 vs. ExPASy TrEMBL
Match: A0A6J1J7P6 (Peptidyl-prolyl cis-trans isomerase OS=Cucurbita maxima OX=3661 GN=LOC111482022 PE=4 SV=1) HSP 1 Score: 238.0 bits (606), Expect = 2.0e-59 Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0
BLAST of Carg14150 vs. ExPASy TrEMBL
Match: A0A6J1FQL7 (Peptidyl-prolyl cis-trans isomerase OS=Cucurbita moschata OX=3662 GN=LOC111447892 PE=4 SV=1) HSP 1 Score: 238.0 bits (606), Expect = 2.0e-59 Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0
BLAST of Carg14150 vs. ExPASy TrEMBL
Match: A0A6J1J909 (Peptidyl-prolyl cis-trans isomerase OS=Cucurbita maxima OX=3661 GN=LOC111482843 PE=4 SV=1) HSP 1 Score: 234.2 bits (596), Expect = 2.9e-58 Identity = 120/122 (98.36%), Postives = 121/122 (99.18%), Query Frame = 0
BLAST of Carg14150 vs. ExPASy TrEMBL
Match: A0A6J1ES02 (Peptidyl-prolyl cis-trans isomerase OS=Cucurbita moschata OX=3662 GN=LOC111435987 PE=4 SV=1) HSP 1 Score: 231.1 bits (588), Expect = 2.5e-57 Identity = 118/122 (96.72%), Postives = 120/122 (98.36%), Query Frame = 0
BLAST of Carg14150 vs. ExPASy TrEMBL
Match: A0A5A7TSF6 (Peptidyl-prolyl cis-trans isomerase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G004880 PE=4 SV=1) HSP 1 Score: 229.9 bits (585), Expect = 5.5e-57 Identity = 115/122 (94.26%), Postives = 120/122 (98.36%), Query Frame = 0
BLAST of Carg14150 vs. TAIR 10
Match: AT2G18040.1 (peptidylprolyl cis/trans isomerase, NIMA-interacting 1 ) HSP 1 Score: 193.4 bits (490), Expect = 1.1e-49 Identity = 94/118 (79.66%), Postives = 108/118 (91.53%), Query Frame = 0
BLAST of Carg14150 vs. TAIR 10
Match: AT1G26550.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein ) HSP 1 Score: 52.8 bits (125), Expect = 2.3e-07 Identity = 35/109 (32.11%), Postives = 49/109 (44.95%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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