Carg14125 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg14125
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	40S ribosomal protein S10-1-like
Location	Carg_Chr04: 3911686 .. 3914102 (+)
RNA-Seq Expression	Carg14125
Synteny	Carg14125

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCATTCTTCACGCCTCTCGCTTCTACTGCTGCCGTTTCAGTTCTTTCTGAACTTCAACCATGGTATTTCTCTTCTTCTTTTATCGTAGCGACTAATTTATGTCTTTCTTTCTTTTTTTTTTTCTTTTTCTCGTCCCAAGGTTGTGTGGTGCTTCAAAATGAATTGACTTTTGAAAGGAATCAATCTGGCAGTGGGAATTGTTGCCCTGTTTGTGTATTTTGAATTGATGTAGTGGGTTGAGTTCTCTTTCCTTCGAAGAATTATTTTCCTTGTGTTCGGTCTCTCATGTTCATTTGTTTCTTTTCTTCAGATTATTTCAGAGAAGAACCGTAGGGAGATCTCCAAGTACCTCTTTCAAGGTACACTTTAATTCAATCCCTCTTAAACGAGGGTTATTTCTGATTTGACCATGATTTCGCGATTTTATTTATTCGTTGTTGTTGGCGCGATTCAGAGGGGGTTTGTTATGCCAAGAAGGACTACAATTTGGCCAAACACCCAGAAATCGATGTGCCCAATTTGCAGGTTATTAAGCTAATGCAGAGCTTCAAGTCCAAGGAATATGTGCGCGAGACGTTTGCTTGGATGCATTACTACTGGTACCTTACCAATGATGGCATTGAGTTCCTCAGGACTTACCTTAACCTTCCTTCCGAAATTGTCCCTGCTACCTTGAAGAAACAAGCCAAGCCTGCTGGCAGGCCCTTTGGCGGACCACCCGGGGATCGCCCACGGTAAGATATGTCTGTAATGCTGATCAATTCATTAAGGTTATGGTTGATTTATTTGTGCTTTGGAACTATGGATTATGAAGTTTTTTCGTTACTGTTCTAGGTTTATAGATGGAGGTGTATGTAATATGTGATTGTATAATGCGAGGGCTATGTTATTTAGTAAGTTGTATTTACTCATATTAGTATTCTGATTGCGTTTTGGTGATTATATGAATTAGGGGTCCACCTCGTTTTGAGGGAGGTGAGAGGAGGTTTGGTGACCGTGATGGCTACCGTGGAGGTCCTCGTGGACCTGCTGGTGAATTTGGTGGTGACAAGGGAGGAGCTCCAGCAGATTACAGGCCTTCTTTTGGGGTAATCTTTGAATCATCCATTTTGCATCATCATAGTGCTATACATAATATGGTTGATGCTCTCTATATAAGAATGTTGCTATTTCCTTGTTTTGATCTGCCCTTGGGATGATTCTTTATGATAGATATAAAATTCATTACAATCACTGTTCATGTATCTAGCAAGAATTTTTGTAAGTGAACCCTGCGCACCAGAGGTCAAGAGTTGATGGGAAGCATCATATTGTTATAGTTTAGTCCCTTCATCTGTTCATATTTTCCTTCATAAGTGCTCCCTACTCAGTTAGTTTGCTCTGTTAATAACTCAGATTATGATGTTAATTCATAGCTTCTTGTGGCATTTGCATGTCATGGTCTTTGTTAATAAAATATTCTTGGGCTCATCTGAAAAAGATTAATGATTTCAATGTGAGGTTTACCTGAGTTGATTAGGCATATTCAAAGAATTGGGGGCTTGTGGCTACTCTGTTTCATCAAAGAATGAGAGTTAATAGAAAAATTATTAGCTGAAATGTTAGAGATGTCAGTGGATAGGTGCAGAAGTTATATTTTGAACGACTTGGCACTCTATGAGAGTCGTTTGTGAGTTCTTCGATGGTTTCGTTGTTCGTTGTCTTATACTTAAAAATTTATCAGGGTCCTGGTGGAAGACCGGGTTTTGGCCGTGGAGCTGGTAGCTATGGCGGAGGAGCTGGAGCTGGAGCAAGCTCGAATCTTCCTTGAAAAATATGGTCTTACGAGCAGTTTAATGAATTTTCAGTGGAATGAGCTAGCAGTTTGATTAAGAGTTTGTTAGCCTTTTTTCCTTTCATTTAGCATATGGGGATCTTACAAATTTAAATTTTGTTCCTCTCTTTGAACGGTTAATTACTATTTGTTTGGTATGAGCAAGAACGTGATTTTATTGTTTTTGAAGATCGACTGCCTTAGTAATGAGGAAACAAACATCTTAAGCAAATTATTATATTTATGATTAAATTGTTTTCTGTATGTGATTTTATTCCATGTTTTGATTTGTATACAACAAATATATGATCTTCATCTTGTTTTCTAACTCCAAAATTATTATTTATATACAAATATATGCTCAAGATCGTATGTTTGAGCAAAAAGTCTAGAAAATGTTTTGATTGGACGAATGCAACTATTTTTTAAAAAATTATTAATATCGAGATTTTCAGATTTAGCAAAATGTAAATTGAAATTTAAAGGATGTAAAATTTTAAGCAAATATTTAAAAATTGGGCGAAGTATTGTTTTAATACATAAATTATGCCCAGAATATCATTCATTAAGGAAATAGTAATAAAAATTTAAGGGTAAAATAGT

mRNA sequence

CTCATTCTTCACGCCTCTCGCTTCTACTGCTGCCGTTTCAGTTCTTTCTGAACTTCAACCATGATTATTTCAGAGAAGAACCGTAGGGAGATCTCCAAGTACCTCTTTCAAGAGGGGGTTTGTTATGCCAAGAAGGACTACAATTTGGCCAAACACCCAGAAATCGATGTGCCCAATTTGCAGGTTATTAAGCTAATGCAGAGCTTCAAGTCCAAGGAATATGTGCGCGAGACGTTTGCTTGGATGCATTACTACTGGTACCTTACCAATGATGGCATTGAGTTCCTCAGGACTTACCTTAACCTTCCTTCCGAAATTGTCCCTGCTACCTTGAAGAAACAAGCCAAGCCTGCTGGCAGGCCCTTTGGCGGACCACCCGGGGATCGCCCACGGGGTCCACCTCGTTTTGAGGGAGGTGAGAGGAGGTTTGGTGACCGTGATGGCTACCGTGGAGGTCCTCGTGGACCTGCTGGTGAATTTGGTGGTGACAAGGGAGGAGCTCCAGCAGATTACAGGCCTTCTTTTGGGGGTCCTGGTGGAAGACCGGGTTTTGGCCGTGGAGCTGGTAGCTATGGCGGAGGAGCTGGAGCTGGAGCAAGCTCGAATCTTCCTTGAAAAATATGGTCTTACGAGCAGTTTAATGAATTTTCAGTGGAATGAGCTAGCAGTTTGATTAAGAGTTTGTTAGCCTTTTTTCCTTTCATTTAGCATATGGGGATCTTACAAATTTAAATTTTGTTCCTCTCTTTGAACGGTTAATTACTATTTGTTTGGTATGAGCAAGAACGTGATTTTATTGTTTTTGAAGATCGACTGCCTTAGTAATGAGGAAACAAACATCTTAAGCAAATTATTATATTTATGATTAAATTGTTTTCTGTATGTGATTTTATTCCATGTTTTGATTTGTATACAACAAATATATGATCTTCATCTTGTTTTCTAACTCCAAAATTATTATTTATATACAAATATATGCTCAAGATCGTATGTTTGAGCAAAAAGTCTAGAAAATGTTTTGATTGGACGAATGCAACTATTTTTTAAAAAATTATTAATATCGAGATTTTCAGATTTAGCAAAATGTAAATTGAAATTTAAAGGATGTAAAATTTTAAGCAAATATTTAAAAATTGGGCGAAGTATTGTTTTAATACATAAATTATGCCCAGAATATCATTCATTAAGGAAATAGTAATAAAAATTTAAGGGTAAAATAGT

Coding sequence (CDS)

ATGATTATTTCAGAGAAGAACCGTAGGGAGATCTCCAAGTACCTCTTTCAAGAGGGGGTTTGTTATGCCAAGAAGGACTACAATTTGGCCAAACACCCAGAAATCGATGTGCCCAATTTGCAGGTTATTAAGCTAATGCAGAGCTTCAAGTCCAAGGAATATGTGCGCGAGACGTTTGCTTGGATGCATTACTACTGGTACCTTACCAATGATGGCATTGAGTTCCTCAGGACTTACCTTAACCTTCCTTCCGAAATTGTCCCTGCTACCTTGAAGAAACAAGCCAAGCCTGCTGGCAGGCCCTTTGGCGGACCACCCGGGGATCGCCCACGGGGTCCACCTCGTTTTGAGGGAGGTGAGAGGAGGTTTGGTGACCGTGATGGCTACCGTGGAGGTCCTCGTGGACCTGCTGGTGAATTTGGTGGTGACAAGGGAGGAGCTCCAGCAGATTACAGGCCTTCTTTTGGGGGTCCTGGTGGAAGACCGGGTTTTGGCCGTGGAGCTGGTAGCTATGGCGGAGGAGCTGGAGCTGGAGCAAGCTCGAATCTTCCTTGA

Protein sequence

MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAGAGASSNLP

Homology

[Close]

BLAST of Carg14125 vs. NCBI nr
Match: XP_022942965.1 (40S ribosomal protein S10-1-like [Cucurbita moschata] >KAG6600554.1 40S ribosomal protein S10-2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031193.1 40S ribosomal protein S10-2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 366.3 bits (939), Expect = 1.5e-97
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120

Query: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAGAGAS 180
           RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAGAGAS
Sbjct: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAGAGAS 180

Query: 181 SNLP 185
           SNLP
Sbjct: 181 SNLP 184

[Close]

BLAST of Carg14125 vs. NCBI nr
Match: XP_022982956.1 (40S ribosomal protein S10-1-like [Cucurbita maxima] >XP_023521589.1 40S ribosomal protein S10-1-like [Cucurbita pepo subsp. pepo] >XP_023528948.1 40S ribosomal protein S10-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 358.6 bits (919), Expect = 3.2e-95
Identity = 182/184 (98.91%), Postives = 182/184 (98.91%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120

Query: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAGAGAS 180
           RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGG  GAGAS
Sbjct: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGG--GAGAS 180

Query: 181 SNLP 185
           SNLP
Sbjct: 181 SNLP 182

[Close]

BLAST of Carg14125 vs. NCBI nr
Match: XP_022985005.1 (40S ribosomal protein S10-1-like [Cucurbita maxima] >XP_022985006.1 40S ribosomal protein S10-1-like [Cucurbita maxima])

HSP 1 Score: 356.3 bits (913), Expect = 1.6e-94
Identity = 181/184 (98.37%), Postives = 181/184 (98.37%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120

Query: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAGAGAS 180
           RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGG  GA AS
Sbjct: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGG--GAAAS 180

Query: 181 SNLP 185
           SNLP
Sbjct: 181 SNLP 182

[Close]

BLAST of Carg14125 vs. NCBI nr
Match: XP_023553253.1 (40S ribosomal protein S10-1-like [Cucurbita pepo subsp. pepo] >XP_023553254.1 40S ribosomal protein S10-1-like [Cucurbita pepo subsp. pepo] >KAG6577181.1 40S ribosomal protein S10-1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015178.1 40S ribosomal protein S10-1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 354.8 bits (909), Expect = 4.6e-94
Identity = 180/184 (97.83%), Postives = 181/184 (98.37%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISEKNRREISKYLFQEGVC+AKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120

Query: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAGAGAS 180
           RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGG  GA AS
Sbjct: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGG--GAAAS 180

Query: 181 SNLP 185
           SNLP
Sbjct: 181 SNLP 182

[Close]

BLAST of Carg14125 vs. NCBI nr
Match: XP_022931372.1 (40S ribosomal protein S10-1-like [Cucurbita moschata] >XP_022931373.1 40S ribosomal protein S10-1-like [Cucurbita moschata])

HSP 1 Score: 353.2 bits (905), Expect = 1.3e-93
Identity = 179/184 (97.28%), Postives = 180/184 (97.83%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISEKNRREISKYLFQEGVC+AKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120

Query: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAGAGAS 180
           RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGG  G  AS
Sbjct: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGG--GGAAS 180

Query: 181 SNLP 185
           SNLP
Sbjct: 181 SNLP 182

[Close]

BLAST of Carg14125 vs. ExPASy Swiss-Prot
Match: P0DKK8 (40S ribosomal protein S10-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS10-1 PE=2 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 8.5e-75
Identity = 147/183 (80.33%), Postives = 159/183 (86.89%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MII +KNR EI KYLFQEGV YAKKDYNLAKHP+IDVPNLQVIKLMQSFKSKEYVRETF+
Sbjct: 1   MIIPKKNRNEICKYLFQEGVLYAKKDYNLAKHPQIDVPNLQVIKLMQSFKSKEYVRETFS 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG-GPPGDRPRGPPRFEGG 120
           W +YYWYLTNDGIE LR YLNLPSEIVPATLKK A+P GRPFG GPPGDRPRGPPRFEG 
Sbjct: 61  WQYYYWYLTNDGIEHLRNYLNLPSEIVPATLKKSARPPGRPFGSGPPGDRPRGPPRFEGD 120

Query: 121 ERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAGAGA 180
             RFGDRDGYRGGPRG  G+FGG+KGGAPA+++PSF   GGRPGFGRG    GGG GAG 
Sbjct: 121 RPRFGDRDGYRGGPRGAPGDFGGEKGGAPAEFQPSFRSSGGRPGFGRGG---GGGFGAGP 180

Query: 181 SSN 183
           +S+
Sbjct: 181 TSS 180

[Close]

BLAST of Carg14125 vs. ExPASy Swiss-Prot
Match: P0DKK9 (40S ribosomal protein S10-2 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS10-2 PE=2 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 8.5e-75
Identity = 147/183 (80.33%), Postives = 159/183 (86.89%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MII +KNR EI KYLFQEGV YAKKDYNLAKHP+IDVPNLQVIKLMQSFKSKEYVRETF+
Sbjct: 1   MIIPKKNRNEICKYLFQEGVLYAKKDYNLAKHPQIDVPNLQVIKLMQSFKSKEYVRETFS 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG-GPPGDRPRGPPRFEGG 120
           W +YYWYLTNDGIE LR YLNLPSEIVPATLKK A+P GRPFG GPPGDRPRGPPRFEG 
Sbjct: 61  WQYYYWYLTNDGIEHLRNYLNLPSEIVPATLKKSARPPGRPFGSGPPGDRPRGPPRFEGD 120

Query: 121 ERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAGAGA 180
             RFGDRDGYRGGPRG  G+FGG+KGGAPA+++PSF   GGRPGFGRG    GGG GAG 
Sbjct: 121 RPRFGDRDGYRGGPRGAPGDFGGEKGGAPAEFQPSFRSSGGRPGFGRGG---GGGFGAGP 180

Query: 181 SSN 183
           +S+
Sbjct: 181 TSS 180

[Close]

BLAST of Carg14125 vs. ExPASy Swiss-Prot
Match: Q9SW09 (40S ribosomal protein S10-1 OS=Arabidopsis thaliana OX=3702 GN=RPS10A PE=1 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 3.6e-73
Identity = 142/179 (79.33%), Postives = 155/179 (86.59%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISE NRREI KYLF+EGVC+AKKD+NL KHP IDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISENNRREICKYLFKEGVCFAKKDFNLPKHPLIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120
           WMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GRPFGGPPGDR RGPPR +G  
Sbjct: 61  WMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPPGDRQRGPPRSDGDR 120

Query: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAGAGA 180
            RFGDRDGYRGGPRG     G +KGGAPAD++PSF G GGRPGFGRGAG Y   A +G+
Sbjct: 121 PRFGDRDGYRGGPRG-----GDEKGGAPADFQPSFQGGGGRPGFGRGAGGYSAAAPSGS 174

[Close]

BLAST of Carg14125 vs. ExPASy Swiss-Prot
Match: Q9LTF2 (40S ribosomal protein S10-3 OS=Arabidopsis thaliana OX=3702 GN=RPS10C PE=1 SV=2)

HSP 1 Score: 269.6 bits (688), Expect = 2.6e-71
Identity = 147/185 (79.46%), Postives = 159/185 (85.95%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISE NR+EI KYLF+EGVC+AKKD+NLAKHP IDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEANRKEICKYLFKEGVCFAKKDFNLAKHPLIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120
           WMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GRPFGGPPGDR RG PR EGG+
Sbjct: 61  WMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPPGDRSRG-PRHEGGD 120

Query: 121 R-RFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAGAGA 180
           R RFGDRDGYR GPR   GEFGG+KGGAPADY+PSF G G   GFGRGAG Y   A +G 
Sbjct: 121 RPRFGDRDGYRAGPRA-GGEFGGEKGGAPADYQPSFQGSG--RGFGRGAGGYSAAAPSG- 179

Query: 181 SSNLP 185
            S LP
Sbjct: 181 -SGLP 179

[Close]

BLAST of Carg14125 vs. ExPASy Swiss-Prot
Match: Q9FFS8 (40S ribosomal protein S10-2 OS=Arabidopsis thaliana OX=3702 GN=RPS10B PE=2 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 1.0e-67
Identity = 147/187 (78.61%), Postives = 161/187 (86.10%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEID-VPNLQVIKLMQSFKSKEYVRETF 60
           MIISE NRREISKYLF+EGV +AKKD+NL +HP I+ VPNLQVIKLMQSFKSKEYVRETF
Sbjct: 1   MIISETNRREISKYLFKEGVLFAKKDFNLPQHPLIESVPNLQVIKLMQSFKSKEYVRETF 60

Query: 61  AWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGG 120
           AWMHYYW+LTN+GI+FLRTYLNLPSEIVPATLKKQ KP GRPFGG  GDRPRGPPR + G
Sbjct: 61  AWMHYYWFLTNEGIDFLRTYLNLPSEIVPATLKKQQKPLGRPFGG-GGDRPRGPPRGD-G 120

Query: 121 ERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSF-GGPGG-RPGFGRGAGSYGGGAGA 180
           ERRFGDRDGYRGGP+   GE+ GDK GAPADY+P F GG GG R GFGRGAG +GGGA  
Sbjct: 121 ERRFGDRDGYRGGPKS-GGEY-GDKAGAPADYQPGFRGGAGGARQGFGRGAGGFGGGA-- 180

Query: 181 GASSNLP 185
            A S+LP
Sbjct: 181 -AGSDLP 180

[Close]

BLAST of Carg14125 vs. ExPASy TrEMBL
Match: A0A6J1FX77 (40S ribosomal protein S10-1-like OS=Cucurbita moschata OX=3662 GN=LOC111447842 PE=4 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 7.4e-98
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120

Query: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAGAGAS 180
           RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAGAGAS
Sbjct: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAGAGAS 180

Query: 181 SNLP 185
           SNLP
Sbjct: 181 SNLP 184

[Close]

BLAST of Carg14125 vs. ExPASy TrEMBL
Match: A0A6J1J0T0 (40S ribosomal protein S10-1-like OS=Cucurbita maxima OX=3661 GN=LOC111481645 PE=4 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 1.5e-95
Identity = 182/184 (98.91%), Postives = 182/184 (98.91%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120

Query: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAGAGAS 180
           RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGG  GAGAS
Sbjct: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGG--GAGAS 180

Query: 181 SNLP 185
           SNLP
Sbjct: 181 SNLP 182

[Close]

BLAST of Carg14125 vs. ExPASy TrEMBL
Match: A0A6J1JA51 (40S ribosomal protein S10-1-like OS=Cucurbita maxima OX=3661 GN=LOC111483100 PE=4 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 7.7e-95
Identity = 181/184 (98.37%), Postives = 181/184 (98.37%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120

Query: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAGAGAS 180
           RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGG  GA AS
Sbjct: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGG--GAAAS 180

Query: 181 SNLP 185
           SNLP
Sbjct: 181 SNLP 182

[Close]

BLAST of Carg14125 vs. ExPASy TrEMBL
Match: A0A6J1EYG0 (40S ribosomal protein S10-1-like OS=Cucurbita moschata OX=3662 GN=LOC111437576 PE=4 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 6.5e-94
Identity = 179/184 (97.28%), Postives = 180/184 (97.83%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISEKNRREISKYLFQEGVC+AKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120

Query: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAGAGAS 180
           RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGG  G  AS
Sbjct: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGG--GGAAS 180

Query: 181 SNLP 185
           SNLP
Sbjct: 181 SNLP 182

[Close]

BLAST of Carg14125 vs. ExPASy TrEMBL
Match: A0A0A0KUQ3 (S10_plectin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G049090 PE=4 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 8.5e-94
Identity = 179/184 (97.28%), Postives = 179/184 (97.28%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120

Query: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAGAGAS 180
           RRFGDRDGYRGGPRGP GEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGG  GA  S
Sbjct: 121 RRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGG--GAAPS 180

Query: 181 SNLP 185
           SNLP
Sbjct: 181 SNLP 182

[Close]

BLAST of Carg14125 vs. TAIR 10
Match: AT4G25740.1 (RNA binding Plectin/S10 domain-containing protein )

HSP 1 Score: 275.8 bits (704), Expect = 2.5e-74
Identity = 142/179 (79.33%), Postives = 155/179 (86.59%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISE NRREI KYLF+EGVC+AKKD+NL KHP IDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISENNRREICKYLFKEGVCFAKKDFNLPKHPLIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120
           WMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GRPFGGPPGDR RGPPR +G  
Sbjct: 61  WMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPPGDRQRGPPRSDGDR 120

Query: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAGAGA 180
            RFGDRDGYRGGPRG     G +KGGAPAD++PSF G GGRPGFGRGAG Y   A +G+
Sbjct: 121 PRFGDRDGYRGGPRG-----GDEKGGAPADFQPSFQGGGGRPGFGRGAGGYSAAAPSGS 174

[Close]

BLAST of Carg14125 vs. TAIR 10
Match: AT5G52650.1 (RNA binding Plectin/S10 domain-containing protein )

HSP 1 Score: 269.6 bits (688), Expect = 1.8e-72
Identity = 147/185 (79.46%), Postives = 159/185 (85.95%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISE NR+EI KYLF+EGVC+AKKD+NLAKHP IDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEANRKEICKYLFKEGVCFAKKDFNLAKHPLIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120
           WMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GRPFGGPPGDR RG PR EGG+
Sbjct: 61  WMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPPGDRSRG-PRHEGGD 120

Query: 121 R-RFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAGAGA 180
           R RFGDRDGYR GPR   GEFGG+KGGAPADY+PSF G G   GFGRGAG Y   A +G 
Sbjct: 121 RPRFGDRDGYRAGPRA-GGEFGGEKGGAPADYQPSFQGSG--RGFGRGAGGYSAAAPSG- 179

Query: 181 SSNLP 185
            S LP
Sbjct: 181 -SGLP 179

[Close]

BLAST of Carg14125 vs. TAIR 10
Match: AT5G41520.1 (RNA binding Plectin/S10 domain-containing protein )

HSP 1 Score: 257.7 bits (657), Expect = 7.2e-69
Identity = 147/187 (78.61%), Postives = 161/187 (86.10%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEID-VPNLQVIKLMQSFKSKEYVRETF 60
           MIISE NRREISKYLF+EGV +AKKD+NL +HP I+ VPNLQVIKLMQSFKSKEYVRETF
Sbjct: 1   MIISETNRREISKYLFKEGVLFAKKDFNLPQHPLIESVPNLQVIKLMQSFKSKEYVRETF 60

Query: 61  AWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGG 120
           AWMHYYW+LTN+GI+FLRTYLNLPSEIVPATLKKQ KP GRPFGG  GDRPRGPPR + G
Sbjct: 61  AWMHYYWFLTNEGIDFLRTYLNLPSEIVPATLKKQQKPLGRPFGG-GGDRPRGPPRGD-G 120

Query: 121 ERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSF-GGPGG-RPGFGRGAGSYGGGAGA 180
           ERRFGDRDGYRGGP+   GE+ GDK GAPADY+P F GG GG R GFGRGAG +GGGA  
Sbjct: 121 ERRFGDRDGYRGGPKS-GGEY-GDKAGAPADYQPGFRGGAGGARQGFGRGAGGFGGGA-- 180

Query: 181 GASSNLP 185
            A S+LP
Sbjct: 181 -AGSDLP 180

[Close]

BLAST of Carg14125 vs. TAIR 10
Match: AT4G25740.2 (RNA binding Plectin/S10 domain-containing protein )

HSP 1 Score: 221.1 bits (562), Expect = 7.4e-58
Identity = 119/179 (66.48%), Postives = 131/179 (73.18%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISE NRREI KYLF+EGVC+AKKD+NL KHP IDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISENNRREICKYLFKEGVCFAKKDFNLPKHPLIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120
           WMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GRPFGGP G             
Sbjct: 61  WMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPRG------------- 120

Query: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAGAGA 180
                               G +KGGAPAD++PSF G GGRPGFGRGAG Y   A +G+
Sbjct: 121 --------------------GDEKGGAPADFQPSFQGGGGRPGFGRGAGGYSAAAPSGS 146

[Close]

BLAST of Carg14125 vs. TAIR 10
Match: AT5G41520.2 (RNA binding Plectin/S10 domain-containing protein )

HSP 1 Score: 191.0 bits (484), Expect = 8.2e-49
Identity = 111/141 (78.72%), Postives = 120/141 (85.11%), Query Frame = 0


Query: 46  MQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGP 105
           MQSFKSKEYVRETFAWMHYYW+LTN+GI+FLRTYLNLPSEIVPATLKKQ KP GRPFGG 
Sbjct: 1   MQSFKSKEYVRETFAWMHYYWFLTNEGIDFLRTYLNLPSEIVPATLKKQQKPLGRPFGG- 60

Query: 106 PGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSF-GGPGG-RPG 165
            GDRPRGPPR + GERRFGDRDGYRGGP+   GE+ GDK GAPADY+P F GG GG R G
Sbjct: 61  GGDRPRGPPRGD-GERRFGDRDGYRGGPKS-GGEY-GDKAGAPADYQPGFRGGAGGARQG 120

Query: 166 FGRGAGSYGGGAGAGASSNLP 185
           FGRGAG +GGGA   A S+LP
Sbjct: 121 FGRGAGGFGGGA---AGSDLP 134

The following BLAST results are available for this feature:

BLAST of Carg14125 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022942965.1	1.5e-97	100.00	40S ribosomal protein S10-1-like [Cucurbita moschata] >KAG6600554.1 40S ribosoma...	[more]
XP_022982956.1	3.2e-95	98.91	40S ribosomal protein S10-1-like [Cucurbita maxima] >XP_023521589.1 40S ribosoma...	[more]
XP_022985005.1	1.6e-94	98.37	40S ribosomal protein S10-1-like [Cucurbita maxima] >XP_022985006.1 40S ribosoma...	[more]
XP_023553253.1	4.6e-94	97.83	40S ribosomal protein S10-1-like [Cucurbita pepo subsp. pepo] >XP_023553254.1 40...	[more]
XP_022931372.1	1.3e-93	97.28	40S ribosomal protein S10-1-like [Cucurbita moschata] >XP_022931373.1 40S riboso...	[more]

BLAST of Carg14125 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0DKK8	8.5e-75	80.33	40S ribosomal protein S10-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS10-1 ...	[more]
P0DKK9	8.5e-75	80.33	40S ribosomal protein S10-2 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS10-2 ...	[more]
Q9SW09	3.6e-73	79.33	40S ribosomal protein S10-1 OS=Arabidopsis thaliana OX=3702 GN=RPS10A PE=1 SV=1	[more]
Q9LTF2	2.6e-71	79.46	40S ribosomal protein S10-3 OS=Arabidopsis thaliana OX=3702 GN=RPS10C PE=1 SV=2	[more]
Q9FFS8	1.0e-67	78.61	40S ribosomal protein S10-2 OS=Arabidopsis thaliana OX=3702 GN=RPS10B PE=2 SV=1	[more]

BLAST of Carg14125 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FX77	7.4e-98	100.00	40S ribosomal protein S10-1-like OS=Cucurbita moschata OX=3662 GN=LOC111447842 P...	[more]
A0A6J1J0T0	1.5e-95	98.91	40S ribosomal protein S10-1-like OS=Cucurbita maxima OX=3661 GN=LOC111481645 PE=...	[more]
A0A6J1JA51	7.7e-95	98.37	40S ribosomal protein S10-1-like OS=Cucurbita maxima OX=3661 GN=LOC111483100 PE=...	[more]
A0A6J1EYG0	6.5e-94	97.28	40S ribosomal protein S10-1-like OS=Cucurbita moschata OX=3662 GN=LOC111437576 P...	[more]
A0A0A0KUQ3	8.5e-94	97.28	S10_plectin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G049090...	[more]

BLAST of Carg14125 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25740.1	2.5e-74	79.33	RNA binding Plectin/S10 domain-containing protein	[more]
AT5G52650.1	1.8e-72	79.46	RNA binding Plectin/S10 domain-containing protein	[more]
AT5G41520.1	7.2e-69	78.61	RNA binding Plectin/S10 domain-containing protein	[more]
AT4G25740.2	7.4e-58	66.48	RNA binding Plectin/S10 domain-containing protein	[more]
AT5G41520.2	8.2e-49	78.72	RNA binding Plectin/S10 domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 1..104 e-value: 2.3E-47 score: 161.2
IPR005326	Plectin/S10, N-terminal	PFAM	PF03501	S10_plectin	coord: 3..94 e-value: 1.1E-42 score: 143.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 93..184
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..129
None	No IPR available	PANTHER	PTHR12146:SF20	40S RIBOSOMAL PROTEIN S10-1-LIKE	coord: 1..184
IPR037447	40S Ribosomal protein S10	PANTHER	PTHR12146	40S RIBOSOMAL PROTEIN S10	coord: 1..184

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg14125-RA	Carg14125-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0022627	cytosolic small ribosomal subunit
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome