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Carg14112 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATTCCTAACAATGTTTTCAATGTGGAGGCCGTACGTCTGATCTACATATGCGCTACATTAGCTATCGTCCTTGCTGCTGGATTGGTTACAGATTTTATTGGGATACATGCTATGTTTGGAGCTTTTGTTGTTGGAGTATTAGTTCGGAAGGATGGGCCATTAGTAGGCGCTTTTGTAGACGAAATAGAGGATCCTGTATCTTGGTCTATTCCTGCCTCTTTACTTTGTATGAAGTGGATTGAAGAGTAATGTAGCCACAATTCAAGGAGCACAGTCCTGGGGTCTTCTAGTTTTAGTTATAGTTACGGCCTGTTTGTGAAAATTCTGCGGCACCTTTCTCGTGTCCATTCTTTGTGAAGTACCTGTTGGTGAGGCTCTCACGTTTAGGATTTCTAATGAACACAAAAGGTTTGGTGGAGCTTATTGCGGCCTCTACTTTCACTTATCAACTTTTCCTGGAGATCTGAGTTGCATATTTGTTTGATTCTGCAGGTTTTAAATGACCAGACCTTTGCAATAATGATTCTTCTGCCAAGCTAGCTTCTCAGGATGATGATGTGTTGTTGAATTCAAGCACAACGTGGGCAAGGACAATTCCATCACACATGTAGAGGAAACCATAAAAAGTTCTGCAGAGGCAATGGAGACAGTGCAGGAGCTGAAAAGCTGCAATCTGTATCTCGTTGGCCAAACACCGGATATCAAAGCAACGTTTGGCTTGATCAGAAGTGAGTGTTCGGAGACCCTCAGTCCAGTCCGAACTTCACTAATTTAG ATGATTCCTAACAATGTTTTCAATGTGGAGGCCGTACGTCTGATCTACATATGCGCTACATTAGCTATCGTCCTTGCTGCTGGATTGGTTACAGATTTTATTGGGATACATGCTATGTTTGGAGCTTTTGTTGTTGGAGTATTAGTTCGGAAGGATGGGCCATTAGTAGGCGCTTTTGTAGACGAAATAGAGGATCCTCACAACGTGGGCAAGGACAATTCCATCACACATGTAGAGGAAACCATAAAAAGTTCTGCAGAGGCAATGGAGACAGTGCAGGAGCTGAAAAGCTGCAATCTGTATCTCGTTGGCCAAACACCGGATATCAAAGCAACGTTTGGCTTGATCAGAAGTGAGTGTTCGGAGACCCTCAGTCCAGTCCGAACTTCACTAATTTAG ATGATTCCTAACAATGTTTTCAATGTGGAGGCCGTACGTCTGATCTACATATGCGCTACATTAGCTATCGTCCTTGCTGCTGGATTGGTTACAGATTTTATTGGGATACATGCTATGTTTGGAGCTTTTGTTGTTGGAGTATTAGTTCGGAAGGATGGGCCATTAGTAGGCGCTTTTGTAGACGAAATAGAGGATCCTCACAACGTGGGCAAGGACAATTCCATCACACATGTAGAGGAAACCATAAAAAGTTCTGCAGAGGCAATGGAGACAGTGCAGGAGCTGAAAAGCTGCAATCTGTATCTCGTTGGCCAAACACCGGATATCAAAGCAACGTTTGGCTTGATCAGAAGTGAGTGTTCGGAGACCCTCAGTCCAGTCCGAACTTCACTAATTTAG MIPNNVFNVEAVRLIYICATLAIVLAAGLVTDFIGIHAMFGAFVVGVLVRKDGPLVGAFVDEIEDPHNVGKDNSITHVEETIKSSAEAMETVQELKSCNLYLVGQTPDIKATFGLIRSECSETLSPVRTSLI Homology
BLAST of Carg14112 vs. NCBI nr
Match: KAG7031180.1 (Cation/H(+) antiporter 18, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 253.8 bits (647), Expect = 8.0e-64 Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of Carg14112 vs. NCBI nr
Match: XP_022931454.1 (cation/H(+) antiporter 18-like [Cucurbita moschata] >XP_022931456.1 cation/H(+) antiporter 18-like [Cucurbita moschata]) HSP 1 Score: 90.9 bits (224), Expect = 8.9e-15 Identity = 49/59 (83.05%), Postives = 51/59 (86.44%), Query Frame = 0
BLAST of Carg14112 vs. NCBI nr
Match: XP_022931454.1 (cation/H(+) antiporter 18-like [Cucurbita moschata] >XP_022931456.1 cation/H(+) antiporter 18-like [Cucurbita moschata]) HSP 1 Score: 79.3 bits (194), Expect = 2.7e-11 Identity = 39/64 (60.94%), Postives = 53/64 (82.81%), Query Frame = 0
HSP 2 Score: 90.9 bits (224), Expect = 8.9e-15 Identity = 49/59 (83.05%), Postives = 51/59 (86.44%), Query Frame = 0
BLAST of Carg14112 vs. NCBI nr
Match: XP_022985362.1 (cation/H(+) antiporter 18-like [Cucurbita maxima] >XP_022985363.1 cation/H(+) antiporter 18-like [Cucurbita maxima]) HSP 1 Score: 75.5 bits (184), Expect = 3.9e-10 Identity = 37/64 (57.81%), Postives = 51/64 (79.69%), Query Frame = 0
HSP 2 Score: 90.9 bits (224), Expect = 8.9e-15 Identity = 49/59 (83.05%), Postives = 51/59 (86.44%), Query Frame = 0
BLAST of Carg14112 vs. NCBI nr
Match: XP_023552772.1 (cation/H(+) antiporter 18-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 78.2 bits (191), Expect = 6.0e-11 Identity = 38/64 (59.38%), Postives = 53/64 (82.81%), Query Frame = 0
HSP 2 Score: 90.9 bits (224), Expect = 8.9e-15 Identity = 49/59 (83.05%), Postives = 51/59 (86.44%), Query Frame = 0
BLAST of Carg14112 vs. ExPASy Swiss-Prot
Match: Q9FFR9 (Cation/H(+) antiporter 18 OS=Arabidopsis thaliana OX=3702 GN=CHX18 PE=2 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 1.5e-12 Identity = 35/56 (62.50%), Postives = 44/56 (78.57%), Query Frame = 0
BLAST of Carg14112 vs. ExPASy Swiss-Prot
Match: Q9SUQ7 (Cation/H(+) antiporter 17 OS=Arabidopsis thaliana OX=3702 GN=CHX17 PE=1 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 8.1e-11 Identity = 33/56 (58.93%), Postives = 42/56 (75.00%), Query Frame = 0
BLAST of Carg14112 vs. ExPASy Swiss-Prot
Match: Q9LUN4 (Cation/H(+) antiporter 19 OS=Arabidopsis thaliana OX=3702 GN=CHX19 PE=2 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 9.0e-10 Identity = 31/56 (55.36%), Postives = 41/56 (73.21%), Query Frame = 0
BLAST of Carg14112 vs. ExPASy Swiss-Prot
Match: Q9M353 (Cation/H(+) antiporter 20 OS=Arabidopsis thaliana OX=3702 GN=CHX20 PE=2 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 9.3e-07 Identity = 27/56 (48.21%), Postives = 37/56 (66.07%), Query Frame = 0
BLAST of Carg14112 vs. ExPASy Swiss-Prot
Match: Q1HDT3 (Cation/H(+) antiporter 16 OS=Arabidopsis thaliana OX=3702 GN=CHX16 PE=2 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 6.0e-06 Identity = 30/56 (53.57%), Postives = 37/56 (66.07%), Query Frame = 0
BLAST of Carg14112 vs. ExPASy TrEMBL
Match: A0A6J1JDE4 (cation/H(+) antiporter 18-like OS=Cucurbita maxima OX=3661 GN=LOC111483397 PE=4 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 4.3e-15 Identity = 49/59 (83.05%), Postives = 51/59 (86.44%), Query Frame = 0
BLAST of Carg14112 vs. ExPASy TrEMBL
Match: A0A6J1JDE4 (cation/H(+) antiporter 18-like OS=Cucurbita maxima OX=3661 GN=LOC111483397 PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 1.9e-10 Identity = 37/64 (57.81%), Postives = 51/64 (79.69%), Query Frame = 0
HSP 2 Score: 90.9 bits (224), Expect = 4.3e-15 Identity = 49/59 (83.05%), Postives = 51/59 (86.44%), Query Frame = 0
BLAST of Carg14112 vs. ExPASy TrEMBL
Match: A0A6J1ETP7 (cation/H(+) antiporter 18-like OS=Cucurbita moschata OX=3662 GN=LOC111437631 PE=4 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 1.3e-11 Identity = 39/64 (60.94%), Postives = 53/64 (82.81%), Query Frame = 0
HSP 2 Score: 90.9 bits (224), Expect = 4.3e-15 Identity = 49/59 (83.05%), Postives = 51/59 (86.44%), Query Frame = 0
BLAST of Carg14112 vs. ExPASy TrEMBL
Match: A0A0A0KZR3 (Na_H_Exchanger domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G050260 PE=4 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 7.6e-12 Identity = 45/86 (52.33%), Postives = 58/86 (67.44%), Query Frame = 0
HSP 2 Score: 90.5 bits (223), Expect = 5.6e-15 Identity = 48/59 (81.36%), Postives = 51/59 (86.44%), Query Frame = 0
BLAST of Carg14112 vs. ExPASy TrEMBL
Match: A0A5D3D055 (Cation/H(+) antiporter 18-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G004300 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 2.7e-09 Identity = 34/61 (55.74%), Postives = 48/61 (78.69%), Query Frame = 0
HSP 2 Score: 90.5 bits (223), Expect = 5.6e-15 Identity = 48/59 (81.36%), Postives = 51/59 (86.44%), Query Frame = 0
BLAST of Carg14112 vs. TAIR 10
Match: AT5G41610.2 (cation/H+ exchanger 18 ) HSP 1 Score: 73.9 bits (180), Expect = 1.1e-13 Identity = 35/56 (62.50%), Postives = 44/56 (78.57%), Query Frame = 0
BLAST of Carg14112 vs. TAIR 10
Match: AT5G41610.1 (cation/H+ exchanger 18 ) HSP 1 Score: 73.9 bits (180), Expect = 1.1e-13 Identity = 35/56 (62.50%), Postives = 44/56 (78.57%), Query Frame = 0
BLAST of Carg14112 vs. TAIR 10
Match: AT4G23700.1 (cation/H+ exchanger 17 ) HSP 1 Score: 68.2 bits (165), Expect = 5.8e-12 Identity = 33/56 (58.93%), Postives = 42/56 (75.00%), Query Frame = 0
BLAST of Carg14112 vs. TAIR 10
Match: AT3G17630.1 (cation/H+ exchanger 19 ) HSP 1 Score: 64.7 bits (156), Expect = 6.4e-11 Identity = 31/56 (55.36%), Postives = 41/56 (73.21%), Query Frame = 0
BLAST of Carg14112 vs. TAIR 10
Match: AT3G53720.1 (cation/H+ exchanger 20 ) HSP 1 Score: 54.7 bits (130), Expect = 6.6e-08 Identity = 27/56 (48.21%), Postives = 37/56 (66.07%), Query Frame = 0
The following BLAST results are available for this feature:
Pages
Pages
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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