Carg14080 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg14080
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	UPF0057 membrane protein
Location	Carg_Chr02: 6193986 .. 6194742 (+)
RNA-Seq Expression	Carg14080
Synteny	Carg14080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCTGGATCTATCTTCCTCCTCTCTTCTTTTCATCCTTTTTCCTTTCCTTCTTTCTGGTTAAATGGCAACTCGCTGCGAAATCTTCTGCGAGATTCTCATCGCTATCTTGATTCCTCCATTGGGCGTCTGCTTCAGGCACGGATGTTGCACTGTACGTTTCTGATTCTTTTCCTCCTCCGTGTTGATTTTGACTCTACTTGAATGAATCCTGATTATCCGATTGCTTATTTGTTCAGGTTGAGTTTTGCATATGTCTTCTTTTGACGTTTCTCGGATATGTTCCTGGAATTATCTACGCTTTGTATGTCATCATTTTCATTGATCGCGATGAGTACTTCGATGAATATAGACGTCCTCTGTATGCGCCGGCCTAGGTTCTTTAGGTATTTCGCCTATACACAATTTGTGTGCTGTAATTTATCTGAATTGGATCTTGACTCTGTGATTGATCTGTACCGTGTGTTCGCTTTCTTTTACCGCTAAACCCTAGTATTTGTTCGTAAGTTGATCCATCCAGGTTCTACCTCAATCAATCAATCTTAGAAATAGAATTCCTACCATTTGTGTTTTGTTTGTTTGTTCAATTTCATGTTGAAATTCAGGGATGTGAATCAAGCGCAGTTGACTTAATTTCTTCTAATTCTAGCTTTGTTCGTTGAACGAGTTCATATCTGGATTGTTATGGTTAAGGATATTCAAGTTCATTGTCATCTAATAAAACTTGCTATGAATTTGAAGAAGTAACTATGATTAGT

mRNA sequence

ATTCTGGATCTATCTTCCTCCTCTCTTCTTTTCATCCTTTTTCCTTTCCTTCTTTCTGGTTAAATGGCAACTCGCTGCGAAATCTTCTGCGAGATTCTCATCGCTATCTTGATTCCTCCATTGGGCGTCTGCTTCAGGCACGGATGTTGCACTGTTGAGTTTTGCATATGTCTTCTTTTGACGTTTCTCGGATATGTTCCTGGAATTATCTACGCTTTGTATGTCATCATTTTCATTGATCGCGATGAGTACTTCGATGAATATAGACGTCCTCTGTATGCGCCGGCCTAGGTTCTTTAGGTATTTCGCCTATACACAATTTGTGTGCTGTAATTTATCTGAATTGGATCTTGACTCTGTGATTGATCTGTACCGTGTGTTCGCTTTCTTTTACCGCTAAACCCTAGTATTTGTTCGTAAGTTGATCCATCCAGGTTCTACCTCAATCAATCAATCTTAGAAATAGAATTCCTACCATTTGTGTTTTGTTTGTTTGTTCAATTTCATGTTGAAATTCAGGGATGTGAATCAAGCGCAGTTGACTTAATTTCTTCTAATTCTAGCTTTGTTCGTTGAACGAGTTCATATCTGGATTGTTATGGTTAAGGATATTCAAGTTCATTGTCATCTAATAAAACTTGCTATGAATTTGAAGAAGTAACTATGATTAGT

Coding sequence (CDS)

ATGGCAACTCGCTGCGAAATCTTCTGCGAGATTCTCATCGCTATCTTGATTCCTCCATTGGGCGTCTGCTTCAGGCACGGATGTTGCACTGTTGAGTTTTGCATATGTCTTCTTTTGACGTTTCTCGGATATGTTCCTGGAATTATCTACGCTTTGTATGTCATCATTTTCATTGATCGCGATGAGTACTTCGATGAATATAGACGTCCTCTGTATGCGCCGGCCTAG

Protein sequence

MATRCEIFCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIIFIDRDEYFDEYRRPLYAPA

Homology

[Close]

BLAST of Carg14080 vs. NCBI nr
Match: XP_022925751.1 (UPF0057 membrane protein At4g30660-like [Cucurbita moschata] >XP_022925759.1 UPF0057 membrane protein At4g30660-like [Cucurbita moschata] >XP_022965238.1 UPF0057 membrane protein At4g30660-like [Cucurbita maxima] >XP_022965241.1 UPF0057 membrane protein At4g30660-like [Cucurbita maxima] >XP_023521009.1 UPF0057 membrane protein At4g30660-like [Cucurbita pepo subsp. pepo] >XP_023521011.1 UPF0057 membrane protein At4g30660-like [Cucurbita pepo subsp. pepo] >XP_023521012.1 UPF0057 membrane protein At4g30660-like [Cucurbita pepo subsp. pepo] >XP_023529545.1 UPF0057 membrane protein At4g30660-like [Cucurbita pepo subsp. pepo] >XP_023529546.1 UPF0057 membrane protein At4g30660-like [Cucurbita pepo subsp. pepo] >KAG7035687.1 UPF0057 membrane protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 157.9 bits (398), Expect = 3.4e-35
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0


Query: 1  MATRCEIFCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIIFIDR 60
          MATRCEIFCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIIFIDR
Sbjct: 1  MATRCEIFCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIIFIDR 60

Query: 61 DEYFDEYRRPLYAPA 76
          DEYFDEYRRPLYAPA
Sbjct: 61 DEYFDEYRRPLYAPA 75

[Close]

BLAST of Carg14080 vs. NCBI nr
Match: XP_008443846.1 (PREDICTED: UPF0057 membrane protein At4g30660 [Cucumis melo])

HSP 1 Score: 150.2 bits (378), Expect = 7.0e-33
Identity = 70/75 (93.33%), Postives = 72/75 (96.00%), Query Frame = 0


Query: 1  MATRCEIFCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIIFIDR 60
          M +RCEIFCEILIAILIPPLGVC RHGCCTVEFCICLLLTFLGYVPGIIYALY I+FIDR
Sbjct: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60

Query: 61 DEYFDEYRRPLYAPA 76
          DEYFDEYRRPLYAPA
Sbjct: 61 DEYFDEYRRPLYAPA 75

[Close]

BLAST of Carg14080 vs. NCBI nr
Match: XP_004146673.1 (UPF0057 membrane protein At4g30660 [Cucumis sativus] >KGN65173.1 hypothetical protein Csa_019763 [Cucumis sativus])

HSP 1 Score: 148.3 bits (373), Expect = 2.7e-32
Identity = 69/75 (92.00%), Postives = 72/75 (96.00%), Query Frame = 0


Query: 1  MATRCEIFCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIIFIDR 60
          M +RCEIFCEILIAILIPPLGVC RHGCCTVEFCICLLLTFLGYVPGIIYALY I+FIDR
Sbjct: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60

Query: 61 DEYFDEYRRPLYAPA 76
          +EYFDEYRRPLYAPA
Sbjct: 61 NEYFDEYRRPLYAPA 75

[Close]

BLAST of Carg14080 vs. NCBI nr
Match: XP_038879686.1 (UPF0057 membrane protein At4g30660-like [Benincasa hispida])

HSP 1 Score: 147.9 bits (372), Expect = 3.5e-32
Identity = 69/75 (92.00%), Postives = 71/75 (94.67%), Query Frame = 0


Query: 1  MATRCEIFCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIIFIDR 60
          M +RCEIFCEILIAILIPPLGVC RHGCCTVEFCICLLLT LGYVPGIIYALY I+FIDR
Sbjct: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYVPGIIYALYAIVFIDR 60

Query: 61 DEYFDEYRRPLYAPA 76
          DEYFDEYRRPLYAPA
Sbjct: 61 DEYFDEYRRPLYAPA 75

[Close]

BLAST of Carg14080 vs. NCBI nr
Match: XP_018828305.1 (UPF0057 membrane protein At4g30660-like [Juglans regia] >XP_018828306.1 UPF0057 membrane protein At4g30660-like [Juglans regia] >XP_040997633.1 UPF0057 membrane protein At4g30660-like [Juglans microcarpa x Juglans regia] >XP_040997634.1 UPF0057 membrane protein At4g30660-like [Juglans microcarpa x Juglans regia])

HSP 1 Score: 146.0 bits (367), Expect = 1.3e-31
Identity = 65/75 (86.67%), Postives = 72/75 (96.00%), Query Frame = 0


Query: 1  MATRCEIFCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIIFIDR 60
          M +RCEIFCEILIAIL+PPLGVCFRHGCC+VEFCICLLLT LGY+PGIIYALY I+F+DR
Sbjct: 1  MPSRCEIFCEILIAILLPPLGVCFRHGCCSVEFCICLLLTILGYIPGIIYALYAIVFVDR 60

Query: 61 DEYFDEYRRPLYAPA 76
          D+YFDEYRRPLYAPA
Sbjct: 61 DQYFDEYRRPLYAPA 75

[Close]

BLAST of Carg14080 vs. ExPASy Swiss-Prot
Match: Q9SUI0 (UPF0057 membrane protein At4g30660 OS=Arabidopsis thaliana OX=3702 GN=At4g30660 PE=3 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 1.2e-27
Identity = 56/73 (76.71%), Postives = 65/73 (89.04%), Query Frame = 0


Query: 1  MATRCEIFCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIIFIDR 60
          M + CEI CEI+IAIL+PPLGVCFR GCCTVEF ICL+LT LGYVPGIIYA+YVI+F  R
Sbjct: 1  MPSNCEILCEIIIAILLPPLGVCFRKGCCTVEFLICLVLTILGYVPGIIYAIYVIVFQHR 60

Query: 61 DEYFDEYRRPLYA 74
          +EYFDEYRRP+Y+
Sbjct: 61 EEYFDEYRRPIYS 73

[Close]

BLAST of Carg14080 vs. ExPASy Swiss-Prot
Match: O82232 (UPF0057 membrane protein At2g24040 OS=Arabidopsis thaliana OX=3702 GN=At2g24040 PE=3 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 7.8e-27
Identity = 54/72 (75.00%), Postives = 63/72 (87.50%), Query Frame = 0


Query: 1  MATRCEIFCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIIFIDR 60
          MA+ CE+ CEI IAIL+PP+GVC RHGCCTVEF ICL+LT LGY+PGIIYA+Y I F+ R
Sbjct: 1  MASSCELCCEIFIAILLPPVGVCLRHGCCTVEFFICLILTCLGYLPGIIYAIYAICFLHR 60

Query: 61 DEYFDEYRRPLY 73
          DEYFDEYRRP+Y
Sbjct: 61 DEYFDEYRRPIY 72

[Close]

BLAST of Carg14080 vs. ExPASy Swiss-Prot
Match: Q9M095 (UPF0057 membrane protein At4g30650 OS=Arabidopsis thaliana OX=3702 GN=At4g30650 PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 5.4e-20
Identity = 45/61 (73.77%), Postives = 54/61 (88.52%), Query Frame = 0


Query: 1  MATRCEIFCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIIFIDR 60
          MA+  E+FCEILIAIL+PPLGVC + GCCTVEF ICL+LT LGY+PGIIYALYVI+F +R
Sbjct: 1  MASNMEVFCEILIAILLPPLGVCLKRGCCTVEFLICLVLTILGYIPGIIYALYVIVFQNR 60

Query: 61 D 62
          +
Sbjct: 61 E 61

[Close]

BLAST of Carg14080 vs. ExPASy Swiss-Prot
Match: Q9LRI7 (Hydrophobic protein OSR8 OS=Oryza sativa subsp. japonica OX=39947 GN=OSR8 PE=3 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 2.3e-18
Identity = 43/64 (67.19%), Postives = 53/64 (82.81%), Query Frame = 0


Query: 4  RCEIFCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIIFIDRDEY 63
          RC  F EIL+AI++PPLGV  R GCC++EFCICLLLT LGYVPGIIYA+YV++ +D D+Y
Sbjct: 5  RCCTFLEILLAIILPPLGVFLRFGCCSMEFCICLLLTILGYVPGIIYAVYVLVALDSDQY 64

Query: 64 FDEY 68
            EY
Sbjct: 65 QREY 68

[Close]

BLAST of Carg14080 vs. ExPASy Swiss-Prot
Match: Q9ZNQ7 (Hydrophobic protein RCI2A OS=Arabidopsis thaliana OX=3702 GN=RCI2A PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 6.7e-10
Identity = 33/48 (68.75%), Postives = 40/48 (83.33%), Query Frame = 0


Query: 8  FCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVI 56
          F +I+IAIL+PPLGV  R G C VEF ICL+LT LGY+PGIIYA+YV+
Sbjct: 6  FVDIIIAILLPPLGVFLRFG-CGVEFWICLVLTLLGYIPGIIYAIYVL 52

[Close]

BLAST of Carg14080 vs. ExPASy TrEMBL
Match: A0A6J1HL57 (UPF0057 membrane protein At4g30660-like OS=Cucurbita maxima OX=3661 GN=LOC111465149 PE=3 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.6e-35
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0


Query: 1  MATRCEIFCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIIFIDR 60
          MATRCEIFCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIIFIDR
Sbjct: 1  MATRCEIFCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIIFIDR 60

Query: 61 DEYFDEYRRPLYAPA 76
          DEYFDEYRRPLYAPA
Sbjct: 61 DEYFDEYRRPLYAPA 75

[Close]

BLAST of Carg14080 vs. ExPASy TrEMBL
Match: A0A6J1ED38 (UPF0057 membrane protein At4g30660-like OS=Cucurbita moschata OX=3662 GN=LOC111433066 PE=3 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.6e-35
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0


Query: 1  MATRCEIFCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIIFIDR 60
          MATRCEIFCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIIFIDR
Sbjct: 1  MATRCEIFCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIIFIDR 60

Query: 61 DEYFDEYRRPLYAPA 76
          DEYFDEYRRPLYAPA
Sbjct: 61 DEYFDEYRRPLYAPA 75

[Close]

BLAST of Carg14080 vs. ExPASy TrEMBL
Match: A0A1S3B9R0 (UPF0057 membrane protein At4g30660 OS=Cucumis melo OX=3656 GN=LOC103487341 PE=3 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 3.4e-33
Identity = 70/75 (93.33%), Postives = 72/75 (96.00%), Query Frame = 0


Query: 1  MATRCEIFCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIIFIDR 60
          M +RCEIFCEILIAILIPPLGVC RHGCCTVEFCICLLLTFLGYVPGIIYALY I+FIDR
Sbjct: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60

Query: 61 DEYFDEYRRPLYAPA 76
          DEYFDEYRRPLYAPA
Sbjct: 61 DEYFDEYRRPLYAPA 75

[Close]

BLAST of Carg14080 vs. ExPASy TrEMBL
Match: A0A0A0LTR2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G257300 PE=3 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.3e-32
Identity = 69/75 (92.00%), Postives = 72/75 (96.00%), Query Frame = 0


Query: 1  MATRCEIFCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIIFIDR 60
          M +RCEIFCEILIAILIPPLGVC RHGCCTVEFCICLLLTFLGYVPGIIYALY I+FIDR
Sbjct: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60

Query: 61 DEYFDEYRRPLYAPA 76
          +EYFDEYRRPLYAPA
Sbjct: 61 NEYFDEYRRPLYAPA 75

[Close]

BLAST of Carg14080 vs. ExPASy TrEMBL
Match: A0A2I4F9J0 (UPF0057 membrane protein At4g30660-like OS=Juglans regia OX=51240 GN=LOC108996740 PE=3 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 6.4e-32
Identity = 65/75 (86.67%), Postives = 72/75 (96.00%), Query Frame = 0


Query: 1  MATRCEIFCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIIFIDR 60
          M +RCEIFCEILIAIL+PPLGVCFRHGCC+VEFCICLLLT LGY+PGIIYALY I+F+DR
Sbjct: 1  MPSRCEIFCEILIAILLPPLGVCFRHGCCSVEFCICLLLTILGYIPGIIYALYAIVFVDR 60

Query: 61 DEYFDEYRRPLYAPA 76
          D+YFDEYRRPLYAPA
Sbjct: 61 DQYFDEYRRPLYAPA 75

[Close]

BLAST of Carg14080 vs. TAIR 10
Match: AT4G28088.1 (Low temperature and salt responsive protein family )

HSP 1 Score: 124.8 bits (312), Expect = 3.0e-29
Identity = 56/72 (77.78%), Postives = 64/72 (88.89%), Query Frame = 0


Query: 1  MATRCEIFCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIIFIDR 60
          MA  CEI CEI+IAILIPPLGVC RHGCCT EF ICL+LT LGYVPGIIYALY I+++DR
Sbjct: 1  MANGCEICCEIMIAILIPPLGVCLRHGCCTTEFMICLILTLLGYVPGIIYALYAIVYVDR 60

Query: 61 DEYFDEYRRPLY 73
          D++FDEYRRPL+
Sbjct: 61 DQFFDEYRRPLF 72

[Close]

BLAST of Carg14080 vs. TAIR 10
Match: AT4G30660.1 (Low temperature and salt responsive protein family )

HSP 1 Score: 123.2 bits (308), Expect = 8.6e-29
Identity = 56/73 (76.71%), Postives = 65/73 (89.04%), Query Frame = 0


Query: 1  MATRCEIFCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIIFIDR 60
          M + CEI CEI+IAIL+PPLGVCFR GCCTVEF ICL+LT LGYVPGIIYA+YVI+F  R
Sbjct: 1  MPSNCEILCEIIIAILLPPLGVCFRKGCCTVEFLICLVLTILGYVPGIIYAIYVIVFQHR 60

Query: 61 DEYFDEYRRPLYA 74
          +EYFDEYRRP+Y+
Sbjct: 61 EEYFDEYRRPIYS 73

[Close]

BLAST of Carg14080 vs. TAIR 10
Match: AT4G30660.2 (Low temperature and salt responsive protein family )

HSP 1 Score: 123.2 bits (308), Expect = 8.6e-29
Identity = 56/73 (76.71%), Postives = 65/73 (89.04%), Query Frame = 0


Query: 1  MATRCEIFCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIIFIDR 60
          M + CEI CEI+IAIL+PPLGVCFR GCCTVEF ICL+LT LGYVPGIIYA+YVI+F  R
Sbjct: 1  MPSNCEILCEIIIAILLPPLGVCFRKGCCTVEFLICLVLTILGYVPGIIYAIYVIVFQHR 60

Query: 61 DEYFDEYRRPLYA 74
          +EYFDEYRRP+Y+
Sbjct: 61 EEYFDEYRRPIYS 73

[Close]

BLAST of Carg14080 vs. TAIR 10
Match: AT2G24040.1 (Low temperature and salt responsive protein family )

HSP 1 Score: 120.6 bits (301), Expect = 5.6e-28
Identity = 54/72 (75.00%), Postives = 63/72 (87.50%), Query Frame = 0


Query: 1  MATRCEIFCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIIFIDR 60
          MA+ CE+ CEI IAIL+PP+GVC RHGCCTVEF ICL+LT LGY+PGIIYA+Y I F+ R
Sbjct: 1  MASSCELCCEIFIAILLPPVGVCLRHGCCTVEFFICLILTCLGYLPGIIYAIYAICFLHR 60

Query: 61 DEYFDEYRRPLY 73
          DEYFDEYRRP+Y
Sbjct: 61 DEYFDEYRRPIY 72

[Close]

BLAST of Carg14080 vs. TAIR 10
Match: AT4G30650.1 (Low temperature and salt responsive protein family )

HSP 1 Score: 97.8 bits (242), Expect = 3.9e-21
Identity = 45/61 (73.77%), Postives = 54/61 (88.52%), Query Frame = 0


Query: 1  MATRCEIFCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIIFIDR 60
          MA+  E+FCEILIAIL+PPLGVC + GCCTVEF ICL+LT LGY+PGIIYALYVI+F +R
Sbjct: 1  MASNMEVFCEILIAILLPPLGVCLKRGCCTVEFLICLVLTILGYIPGIIYALYVIVFQNR 60

Query: 61 D 62
          +
Sbjct: 61 E 61

The following BLAST results are available for this feature:

BLAST of Carg14080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022925751.1	3.4e-35	100.00	UPF0057 membrane protein At4g30660-like [Cucurbita moschata] >XP_022925759.1 UPF...	[more]
XP_008443846.1	7.0e-33	93.33	PREDICTED: UPF0057 membrane protein At4g30660 [Cucumis melo]	[more]
XP_004146673.1	2.7e-32	92.00	UPF0057 membrane protein At4g30660 [Cucumis sativus] >KGN65173.1 hypothetical pr...	[more]
XP_038879686.1	3.5e-32	92.00	UPF0057 membrane protein At4g30660-like [Benincasa hispida]	[more]
XP_018828305.1	1.3e-31	86.67	UPF0057 membrane protein At4g30660-like [Juglans regia] >XP_018828306.1 UPF0057 ...	[more]

BLAST of Carg14080 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SUI0	1.2e-27	76.71	UPF0057 membrane protein At4g30660 OS=Arabidopsis thaliana OX=3702 GN=At4g30660 ...	[more]
O82232	7.8e-27	75.00	UPF0057 membrane protein At2g24040 OS=Arabidopsis thaliana OX=3702 GN=At2g24040 ...	[more]
Q9M095	5.4e-20	73.77	UPF0057 membrane protein At4g30650 OS=Arabidopsis thaliana OX=3702 GN=At4g30650 ...	[more]
Q9LRI7	2.3e-18	67.19	Hydrophobic protein OSR8 OS=Oryza sativa subsp. japonica OX=39947 GN=OSR8 PE=3 S...	[more]
Q9ZNQ7	6.7e-10	68.75	Hydrophobic protein RCI2A OS=Arabidopsis thaliana OX=3702 GN=RCI2A PE=2 SV=1	[more]

BLAST of Carg14080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HL57	1.6e-35	100.00	UPF0057 membrane protein At4g30660-like OS=Cucurbita maxima OX=3661 GN=LOC111465...	[more]
A0A6J1ED38	1.6e-35	100.00	UPF0057 membrane protein At4g30660-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A1S3B9R0	3.4e-33	93.33	UPF0057 membrane protein At4g30660 OS=Cucumis melo OX=3656 GN=LOC103487341 PE=3 ...	[more]
A0A0A0LTR2	1.3e-32	92.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G257300 PE=3 SV=1	[more]
A0A2I4F9J0	6.4e-32	86.67	UPF0057 membrane protein At4g30660-like OS=Juglans regia OX=51240 GN=LOC10899674...	[more]

BLAST of Carg14080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28088.1	3.0e-29	77.78	Low temperature and salt responsive protein family	[more]
AT4G30660.1	8.6e-29	76.71	Low temperature and salt responsive protein family	[more]
AT4G30660.2	8.6e-29	76.71	Low temperature and salt responsive protein family	[more]
AT2G24040.1	5.6e-28	75.00	Low temperature and salt responsive protein family	[more]
AT4G30650.1	3.9e-21	73.77	Low temperature and salt responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000612	Proteolipid membrane potential modulator	PFAM	PF01679	Pmp3	coord: 8..55 e-value: 3.9E-17 score: 62.2
IPR000612	Proteolipid membrane potential modulator	PANTHER	PTHR21659	HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED	coord: 1..73
IPR000612	Proteolipid membrane potential modulator	PROSITE	PS01309	UPF0057	coord: 12..27
None	No IPR available	PANTHER	PTHR21659:SF93	BNAA03G50460D PROTEIN	coord: 1..73

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg14080-RA	Carg14080-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane