Carg14001 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg14001
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Protein yippee-like
Location	Carg_Chr02: 6649255 .. 6650596 (-)
RNA-Seq Expression	Carg14001
Synteny	Carg14001

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTCATCTTCATACCAAAAAGATATTGAAGAAATGTGTCTGAAACTGTAGAGCTTCAGAGGAGCTCAACCATGGAGGCCCACAATCCGTACTCAACCTTCGCGTAAATTTCTGACTTCTTTTCATTGTTCTTCCTCTTACGCTTCCCAAATTCAACTTCTCCTTCATTTTCTCTGTTAATTAATCCCAAATTCCTTTTCACAGTCTCCAAGCTAAGAATGATTTCCATTTCTCTCTCTTCAATTTGTATTTATCTTTGCTTTAATCGCTCATACCTCATCAACTTTCTTCCATAATTTTCACTAAACTAATAATTTCCAGCACAATCAGGTTCTTCTCTCTCCCTTTATTTCCATTTTCCATAATTTCTTGTTCGTTGATTCAATGATTTTTCCACATTTTGGCTTTTCGGTATGCTCCTTCTCATACTTTTATTGGTGTTCCTGTTCTTGTTCTTAATCCTGTTCTTGTTCTTAATCCTGTTCTTGTTGTTGTTCTTAATCCTGTTCCTGTATTATTGAATCTCTTTTGCTTGAAATCGTCTCTCTGATCCTTTATGTTATCTTATATATTTGATCGCTAACCCCTTTTTGATTATTGATCTTTTTCTTTAGGTTTCTAGGTCACCATTGAAATCATTATAGGTAAACGATTTTGTTCTTGTTTTTACTTTTCCCACCCCTCGTTGGGATTTTGATGATCCATTTATATGGTTTCTTGATGGATGCTTGAATCTCTTTTAATGCAGTCTAGGTGTTTGATTTAATGCTTGGGGCTTGATGGTTGTGTAGGAGGAGAGGCGTTTTGAGCTCAATCTTCTTGATCAATGGCTGAACTATTGGGGCCACGTTTGTATAGTTGCTGTAATTGTAGAAACCATGTTGCCCTCCATGATGATATAATTTCTAAAGCTTTTCAGGTGGGATCTTAGTGCGTTTGATTATCATCAATGCAAAAGGGTTTGCTAATCACTCAAAACCCAATGAGAAATTCATGGATTTCATGTTTTTAACACAATTTTTCTGAAGCTTTAGATTGCAAATGCGTTTCTTAAACTTTTCCTGAAGAACTTTTCATTATCTAATCTTGTTTTTGTCATGAATTATCTCAATAGGGAAGACATGGGCGTGCTTTTCTGTTCTCTCATGCTATGAACTTCACAGTGGGACCAAAAGAAGACCGGCATCTCATGACGGGTCTCCACACTGTTGCTGATGTGCATTGTGTTGACTGTCGTGAGGTGCTGGGGTGGAAGTATGAGAGGGCCTATGAGGCATCACAGAAGTATAAAGAAGGAAAGTTCATTCTTGAAAAATCAAAAATCGTTCGGGACAACTGGTAA

mRNA sequence

AATTCATCTTCATACCAAAAAGATATTGAAGAAATGTGTCTGAAACTGTAGAGCTTCAGAGGAGCTCAACCATGGAGGCCCACAATCCGTACTCAACCTTCGCGTAAATTTCTGACTTCTTTTCATTGTTCTTCCTCTTACGCTTCCCAAATTCAACTTCTCCTTCATTTTCTCTGTTAATTAATCCCAAATTCCTTTTCACAGTCTCCAAGCTAAGAATGATTTCCATTTCTCTCTCTTCAATTTGTATTTATCTTTGCTTTAATCGCTCATACCTCATCAACTTTCTTCCATAATTTTCACTAAACTAATAATTTCCAGCACAATCAGGTTTCTAGGTCACCATTGAAATCATTATAGTCTAGGTGTTTGATTTAATGCTTGGGGCTTGATGGTTGTGTAGGAGGAGAGGCGTTTTGAGCTCAATCTTCTTGATCAATGGCTGAACTATTGGGGCCACGTTTGTATAGTTGCTGTAATTGTAGAAACCATGTTGCCCTCCATGATGATATAATTTCTAAAGCTTTTCAGGGAAGACATGGGCGTGCTTTTCTGTTCTCTCATGCTATGAACTTCACAGTGGGACCAAAAGAAGACCGGCATCTCATGACGGGTCTCCACACTGTTGCTGATGTGCATTGTGTTGACTGTCGTGAGGTGCTGGGGTGGAAGTATGAGAGGGCCTATGAGGCATCACAGAAGTATAAAGAAGGAAAGTTCATTCTTGAAAAATCAAAAATCGTTCGGGACAACTGGTAA

Coding sequence (CDS)

ATGGCTGAACTATTGGGGCCACGTTTGTATAGTTGCTGTAATTGTAGAAACCATGTTGCCCTCCATGATGATATAATTTCTAAAGCTTTTCAGGGAAGACATGGGCGTGCTTTTCTGTTCTCTCATGCTATGAACTTCACAGTGGGACCAAAAGAAGACCGGCATCTCATGACGGGTCTCCACACTGTTGCTGATGTGCATTGTGTTGACTGTCGTGAGGTGCTGGGGTGGAAGTATGAGAGGGCCTATGAGGCATCACAGAAGTATAAAGAAGGAAAGTTCATTCTTGAAAAATCAAAAATCGTTCGGGACAACTGGTAA

Protein sequence

MAELLGPRLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNFTVGPKEDRHLMTGLHTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW

Homology

[Close]

BLAST of Carg14001 vs. NCBI nr
Match: XP_022958298.1 (protein yippee-like At4g27745 [Cucurbita moschata] >XP_022958299.1 protein yippee-like At4g27745 [Cucurbita moschata] >XP_022958300.1 protein yippee-like At4g27745 [Cucurbita moschata] >XP_022958301.1 protein yippee-like At4g27745 [Cucurbita moschata] >XP_022958302.1 protein yippee-like At4g27745 [Cucurbita moschata] >XP_022958303.1 protein yippee-like At4g27745 [Cucurbita moschata] >XP_022958304.1 protein yippee-like At4g27745 [Cucurbita moschata] >XP_022958305.1 protein yippee-like At4g27745 [Cucurbita moschata] >XP_022958306.1 protein yippee-like At4g27745 [Cucurbita moschata] >XP_022958308.1 protein yippee-like At4g27745 [Cucurbita moschata] >XP_022958309.1 protein yippee-like At4g27745 [Cucurbita moschata] >KAG7035764.1 Protein yippee-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 231.9 bits (590), Expect = 2.6e-57
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0


Query: 1   MAELLGPRLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNFTVGPKEDRHLMTGL 60
           MAELLGPRLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNFTVGPKEDRHLMTGL
Sbjct: 1   MAELLGPRLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNFTVGPKEDRHLMTGL 60

Query: 61  HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW 107
           HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW
Sbjct: 61  HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW 106

[Close]

BLAST of Carg14001 vs. NCBI nr
Match: XP_022922143.1 (protein yippee-like At4g27745 [Cucurbita moschata] >XP_022922144.1 protein yippee-like At4g27745 [Cucurbita moschata] >XP_022922145.1 protein yippee-like At4g27745 [Cucurbita moschata] >XP_022974360.1 protein yippee-like At4g27745 isoform X1 [Cucurbita maxima] >XP_022974361.1 protein yippee-like At4g27745 isoform X1 [Cucurbita maxima] >XP_022974362.1 protein yippee-like At4g27745 isoform X1 [Cucurbita maxima] >XP_022996191.1 protein yippee-like At4g27745 [Cucurbita maxima] >XP_022996192.1 protein yippee-like At4g27745 [Cucurbita maxima] >XP_022996193.1 protein yippee-like At4g27745 [Cucurbita maxima] >XP_022996194.1 protein yippee-like At4g27745 [Cucurbita maxima] >XP_022996195.1 protein yippee-like At4g27745 [Cucurbita maxima] >XP_022996196.1 protein yippee-like At4g27745 [Cucurbita maxima] >XP_022996198.1 protein yippee-like At4g27745 [Cucurbita maxima] >XP_022996199.1 protein yippee-like At4g27745 [Cucurbita maxima] >XP_022996200.1 protein yippee-like At4g27745 [Cucurbita maxima] >XP_022996201.1 protein yippee-like At4g27745 [Cucurbita maxima] >XP_022996202.1 protein yippee-like At4g27745 [Cucurbita maxima] >XP_023532434.1 protein yippee-like At4g27745 [Cucurbita pepo subsp. pepo] >XP_023532435.1 protein yippee-like At4g27745 [Cucurbita pepo subsp. pepo] >XP_023532436.1 protein yippee-like At4g27745 [Cucurbita pepo subsp. pepo] >XP_023532437.1 protein yippee-like At4g27745 [Cucurbita pepo subsp. pepo] >XP_023532438.1 protein yippee-like At4g27745 [Cucurbita pepo subsp. pepo] >XP_023532439.1 protein yippee-like At4g27745 [Cucurbita pepo subsp. pepo] >XP_023532440.1 protein yippee-like At4g27745 [Cucurbita pepo subsp. pepo] >XP_023532441.1 protein yippee-like At4g27745 [Cucurbita pepo subsp. pepo] >XP_023532442.1 protein yippee-like At4g27745 [Cucurbita pepo subsp. pepo] >XP_023532443.1 protein yippee-like At4g27745 [Cucurbita pepo subsp. pepo] >XP_023532445.1 protein yippee-like At4g27745 [Cucurbita pepo subsp. pepo] >XP_023532446.1 protein yippee-like At4g27745 [Cucurbita pepo subsp. pepo] >XP_023549564.1 protein yippee-like At4g27745 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023549565.1 protein yippee-like At4g27745 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023549566.1 protein yippee-like At4g27745 isoform X1 [Cucurbita pepo subsp. pepo] >KAG7016809.1 Protein yippee-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 229.6 bits (584), Expect = 1.3e-56
Identity = 105/106 (99.06%), Postives = 105/106 (99.06%), Query Frame = 0


Query: 1   MAELLGPRLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNFTVGPKEDRHLMTGL 60
           MAELLGPRLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMN TVGPKEDRHLMTGL
Sbjct: 1   MAELLGPRLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGL 60

Query: 61  HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW 107
           HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW
Sbjct: 61  HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW 106

[Close]

BLAST of Carg14001 vs. NCBI nr
Match: XP_004145943.1 (protein yippee-like At4g27745 isoform X3 [Cucumis sativus] >XP_008437624.1 PREDICTED: protein yippee-like At4g27745 isoform X1 [Cucumis melo] >XP_011654604.1 protein yippee-like At4g27745 isoform X3 [Cucumis sativus] >XP_016898814.1 PREDICTED: protein yippee-like At4g27745 isoform X1 [Cucumis melo] >XP_038876277.1 protein yippee-like At4g27745 [Benincasa hispida] >XP_038876278.1 protein yippee-like At4g27745 [Benincasa hispida] >XP_038876279.1 protein yippee-like At4g27745 [Benincasa hispida] >XP_038876280.1 protein yippee-like At4g27745 [Benincasa hispida] >KAA0042536.1 protein yippee-like [Cucumis melo var. makuwa] >KGN49846.1 hypothetical protein Csa_000292 [Cucumis sativus] >TYK05939.1 protein yippee-like [Cucumis melo var. makuwa])

HSP 1 Score: 228.0 bits (580), Expect = 3.8e-56
Identity = 104/106 (98.11%), Postives = 104/106 (98.11%), Query Frame = 0


Query: 1   MAELLGPRLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNFTVGPKEDRHLMTGL 60
           MAELLGPRLYSCCNCRNHVA HDDIISKAFQGRHGRAFLFSHAMN TVGPKEDRHLMTGL
Sbjct: 1   MAELLGPRLYSCCNCRNHVAFHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGL 60

Query: 61  HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW 107
           HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW
Sbjct: 61  HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW 106

[Close]

BLAST of Carg14001 vs. NCBI nr
Match: KAG6605800.1 (Protein yippee-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 227.6 bits (579), Expect = 4.9e-56
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 1   MAELLGPRLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNFTVGPKEDRHLMTGL 60
           MAELLGPRLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNFTVGPKEDRHLMTGL
Sbjct: 1   MAELLGPRLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNFTVGPKEDRHLMTGL 60

Query: 61  HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDN 106
           HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDN
Sbjct: 61  HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDN 105

[Close]

BLAST of Carg14001 vs. NCBI nr
Match: XP_022138242.1 (protein yippee-like At4g27745 [Momordica charantia] >XP_022138243.1 protein yippee-like At4g27745 [Momordica charantia] >XP_022138244.1 protein yippee-like At4g27745 [Momordica charantia])

HSP 1 Score: 223.4 bits (568), Expect = 9.3e-55
Identity = 102/106 (96.23%), Postives = 102/106 (96.23%), Query Frame = 0


Query: 1   MAELLGPRLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNFTVGPKEDRHLMTGL 60
           MAELLGPRLYSCCNCRNHVA HDDIISKAFQGRHGRAFLFSHAMN TVGPKEDRHLMTGL
Sbjct: 1   MAELLGPRLYSCCNCRNHVAFHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGL 60

Query: 61  HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW 107
           HTVADVHCVDC  VLGWKYERAYEASQKYKEGKFILEKSKIVRDNW
Sbjct: 61  HTVADVHCVDCHVVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW 106

[Close]

BLAST of Carg14001 vs. ExPASy Swiss-Prot
Match: Q9T096 (Protein yippee-like At4g27745 OS=Arabidopsis thaliana OX=3702 GN=At4g27745 PE=3 SV=2)

HSP 1 Score: 197.6 bits (501), Expect = 7.1e-50
Identity = 87/106 (82.08%), Postives = 96/106 (90.57%), Query Frame = 0


Query: 1   MAELLGPRLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNFTVGPKEDRHLMTGL 60
           MA+ +GPRLYSCCNCRNHV LHDDIISKAFQGR GRAFLFSHAMN  VGPKEDR+L+TGL
Sbjct: 1   MAQAIGPRLYSCCNCRNHVGLHDDIISKAFQGRTGRAFLFSHAMNIVVGPKEDRNLLTGL 60

Query: 61  HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW 107
           HTVAD+ CVDC E LGWKYERAYE SQKYKEGKFI EK+KIV+++W
Sbjct: 61  HTVADISCVDCNEPLGWKYERAYETSQKYKEGKFIFEKAKIVKEDW 106

[Close]

BLAST of Carg14001 vs. ExPASy Swiss-Prot
Match: A6QPH8 (Protein yippee-like 3 OS=Bos taurus OX=9913 GN=YPEL3 PE=3 SV=2)

HSP 1 Score: 139.4 bits (350), Expect = 2.3e-32
Identity = 58/98 (59.18%), Postives = 79/98 (80.61%), Query Frame = 0


Query: 8   RLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNFTVGPKEDRHLMTGLHTVADVH 67
           R YSC +CR H+A HDD+ISK+FQG  GRA+LF+  +N   GP E+R L+TGLH VAD+H
Sbjct: 19  RRYSCAHCRAHLANHDDLISKSFQGSQGRAYLFNSVVNVGCGPAEERVLLTGLHAVADIH 78

Query: 68  CVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDN 106
           C +C+  LGWKYE+A+E+SQKYKEGK+I+E + +++DN
Sbjct: 79  CENCKTTLGWKYEQAFESSQKYKEGKYIIELNHMIKDN 116

[Close]

BLAST of Carg14001 vs. ExPASy Swiss-Prot
Match: Q65Z57 (Protein yippee-like 3 OS=Chlorocebus aethiops OX=9534 GN=YPEL3 PE=3 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 2.3e-32
Identity = 58/98 (59.18%), Postives = 79/98 (80.61%), Query Frame = 0


Query: 8   RLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNFTVGPKEDRHLMTGLHTVADVH 67
           R YSC +CR H+A HDD+ISK+FQG  GRA+LF+  +N   GP E+R L+TGLH VAD+H
Sbjct: 19  RRYSCAHCRAHLANHDDLISKSFQGSQGRAYLFNSVVNVGCGPAEERVLLTGLHAVADIH 78

Query: 68  CVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDN 106
           C +C+  LGWKYE+A+E+SQKYKEGK+I+E + +++DN
Sbjct: 79  CENCKTTLGWKYEQAFESSQKYKEGKYIIELNHMIKDN 116

[Close]

BLAST of Carg14001 vs. ExPASy Swiss-Prot
Match: P61236 (Protein yippee-like 3 OS=Homo sapiens OX=9606 GN=YPEL3 PE=2 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 2.3e-32
Identity = 58/98 (59.18%), Postives = 79/98 (80.61%), Query Frame = 0


Query: 8   RLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNFTVGPKEDRHLMTGLHTVADVH 67
           R YSC +CR H+A HDD+ISK+FQG  GRA+LF+  +N   GP E+R L+TGLH VAD+H
Sbjct: 19  RRYSCAHCRAHLANHDDLISKSFQGSQGRAYLFNSVVNVGCGPAEERVLLTGLHAVADIH 78

Query: 68  CVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDN 106
           C +C+  LGWKYE+A+E+SQKYKEGK+I+E + +++DN
Sbjct: 79  CENCKTTLGWKYEQAFESSQKYKEGKYIIELNHMIKDN 116

[Close]

BLAST of Carg14001 vs. ExPASy Swiss-Prot
Match: P61237 (Protein yippee-like 3 OS=Mus musculus OX=10090 GN=Ypel3 PE=1 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 2.3e-32
Identity = 58/98 (59.18%), Postives = 79/98 (80.61%), Query Frame = 0


Query: 8   RLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNFTVGPKEDRHLMTGLHTVADVH 67
           R YSC +CR H+A HDD+ISK+FQG  GRA+LF+  +N   GP E+R L+TGLH VAD+H
Sbjct: 19  RRYSCAHCRAHLANHDDLISKSFQGSQGRAYLFNSVVNVGCGPAEERVLLTGLHAVADIH 78

Query: 68  CVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDN 106
           C +C+  LGWKYE+A+E+SQKYKEGK+I+E + +++DN
Sbjct: 79  CENCKTTLGWKYEQAFESSQKYKEGKYIIELNHMIKDN 116

[Close]

BLAST of Carg14001 vs. ExPASy TrEMBL
Match: A0A6J1H4Q3 (Protein yippee-like OS=Cucurbita moschata OX=3662 GN=LOC111459562 PE=3 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 1.3e-57
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0


Query: 1   MAELLGPRLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNFTVGPKEDRHLMTGL 60
           MAELLGPRLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNFTVGPKEDRHLMTGL
Sbjct: 1   MAELLGPRLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNFTVGPKEDRHLMTGL 60

Query: 61  HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW 107
           HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW
Sbjct: 61  HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW 106

[Close]

BLAST of Carg14001 vs. ExPASy TrEMBL
Match: A0A6J1KA57 (Protein yippee-like OS=Cucurbita maxima OX=3661 GN=LOC111491497 PE=3 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 6.3e-57
Identity = 105/106 (99.06%), Postives = 105/106 (99.06%), Query Frame = 0


Query: 1   MAELLGPRLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNFTVGPKEDRHLMTGL 60
           MAELLGPRLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMN TVGPKEDRHLMTGL
Sbjct: 1   MAELLGPRLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGL 60

Query: 61  HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW 107
           HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW
Sbjct: 61  HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW 106

[Close]

BLAST of Carg14001 vs. ExPASy TrEMBL
Match: A0A6J1E2J3 (Protein yippee-like OS=Cucurbita moschata OX=3662 GN=LOC111430209 PE=3 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 6.3e-57
Identity = 105/106 (99.06%), Postives = 105/106 (99.06%), Query Frame = 0


Query: 1   MAELLGPRLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNFTVGPKEDRHLMTGL 60
           MAELLGPRLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMN TVGPKEDRHLMTGL
Sbjct: 1   MAELLGPRLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGL 60

Query: 61  HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW 107
           HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW
Sbjct: 61  HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW 106

[Close]

BLAST of Carg14001 vs. ExPASy TrEMBL
Match: A0A1S3AUL4 (Protein yippee-like OS=Cucumis melo OX=3656 GN=LOC103482979 PE=3 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 1.8e-56
Identity = 104/106 (98.11%), Postives = 104/106 (98.11%), Query Frame = 0


Query: 1   MAELLGPRLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNFTVGPKEDRHLMTGL 60
           MAELLGPRLYSCCNCRNHVA HDDIISKAFQGRHGRAFLFSHAMN TVGPKEDRHLMTGL
Sbjct: 1   MAELLGPRLYSCCNCRNHVAFHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGL 60

Query: 61  HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW 107
           HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW
Sbjct: 61  HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW 106

[Close]

BLAST of Carg14001 vs. ExPASy TrEMBL
Match: A0A5A7TKR3 (Protein yippee-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00320 PE=3 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 1.8e-56
Identity = 104/106 (98.11%), Postives = 104/106 (98.11%), Query Frame = 0


Query: 1   MAELLGPRLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNFTVGPKEDRHLMTGL 60
           MAELLGPRLYSCCNCRNHVA HDDIISKAFQGRHGRAFLFSHAMN TVGPKEDRHLMTGL
Sbjct: 1   MAELLGPRLYSCCNCRNHVAFHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGL 60

Query: 61  HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW 107
           HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW
Sbjct: 61  HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW 106

[Close]

BLAST of Carg14001 vs. TAIR 10
Match: AT4G27745.1 (Yippee family putative zinc-binding protein )

HSP 1 Score: 197.6 bits (501), Expect = 5.1e-51
Identity = 87/106 (82.08%), Postives = 96/106 (90.57%), Query Frame = 0


Query: 1   MAELLGPRLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNFTVGPKEDRHLMTGL 60
           MA+ +GPRLYSCCNCRNHV LHDDIISKAFQGR GRAFLFSHAMN  VGPKEDR+L+TGL
Sbjct: 1   MAQAIGPRLYSCCNCRNHVGLHDDIISKAFQGRTGRAFLFSHAMNIVVGPKEDRNLLTGL 60

Query: 61  HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW 107
           HTVAD+ CVDC E LGWKYERAYE SQKYKEGKFI EK+KIV+++W
Sbjct: 61  HTVADISCVDCNEPLGWKYERAYETSQKYKEGKFIFEKAKIVKEDW 106

[Close]

BLAST of Carg14001 vs. TAIR 10
Match: AT3G08990.1 (Yippee family putative zinc-binding protein )

HSP 1 Score: 125.2 bits (313), Expect = 3.2e-29
Identity = 55/94 (58.51%), Postives = 73/94 (77.66%), Query Frame = 0


Query: 9   LYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNFTVGPKEDRHLMTGLHTVADVHC 68
           +YSC  C+ H A+ +DIISK+F  +HGRA+LF + +N TVG KE R ++TG HTVAD+ C
Sbjct: 13  VYSCKYCQTHFAVTNDIISKSFHCKHGRAYLFDNVVNVTVGEKEHRVMITGWHTVADIFC 72

Query: 69  VDCREVLGWKYERAYEASQKYKEGKFILEKSKIV 103
           V C  ++GWKYE AY+ SQKYKEGKFILE+ K++
Sbjct: 73  VSCGSLVGWKYEIAYDKSQKYKEGKFILERFKVL 106

[Close]

BLAST of Carg14001 vs. TAIR 10
Match: AT3G11230.1 (Yippee family putative zinc-binding protein )

HSP 1 Score: 125.2 bits (313), Expect = 3.2e-29
Identity = 52/92 (56.52%), Postives = 72/92 (78.26%), Query Frame = 0


Query: 10  YSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNFTVGPKEDRHLMTGLHTVADVHCV 69
           YSC +C+ ++AL DD++SK+FQ RHG+A+LFS  +N   G KEDR +MTG+HTV D++CV
Sbjct: 14  YSCKHCKTNLALCDDVVSKSFQSRHGKAYLFSKVVNVYAGKKEDRMMMTGMHTVVDIYCV 73

Query: 70  DCREVLGWKYERAYEASQKYKEGKFILEKSKI 102
            C   +GWKYE A+E +QKYKEGK +LE+ K+
Sbjct: 74  KCGSYVGWKYEFAFEKNQKYKEGKSVLERYKV 105

[Close]

BLAST of Carg14001 vs. TAIR 10
Match: AT3G11230.2 (Yippee family putative zinc-binding protein )

HSP 1 Score: 125.2 bits (313), Expect = 3.2e-29
Identity = 52/92 (56.52%), Postives = 72/92 (78.26%), Query Frame = 0


Query: 10  YSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNFTVGPKEDRHLMTGLHTVADVHCV 69
           YSC +C+ ++AL DD++SK+FQ RHG+A+LFS  +N   G KEDR +MTG+HTV D++CV
Sbjct: 47  YSCKHCKTNLALCDDVVSKSFQSRHGKAYLFSKVVNVYAGKKEDRMMMTGMHTVVDIYCV 106

Query: 70  DCREVLGWKYERAYEASQKYKEGKFILEKSKI 102
            C   +GWKYE A+E +QKYKEGK +LE+ K+
Sbjct: 107 KCGSYVGWKYEFAFEKNQKYKEGKSVLERYKV 138

[Close]

BLAST of Carg14001 vs. TAIR 10
Match: AT3G08990.2 (Yippee family putative zinc-binding protein )

HSP 1 Score: 125.2 bits (313), Expect = 3.2e-29
Identity = 55/94 (58.51%), Postives = 73/94 (77.66%), Query Frame = 0


Query: 9   LYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNFTVGPKEDRHLMTGLHTVADVHC 68
           +YSC  C+ H A+ +DIISK+F  +HGRA+LF + +N TVG KE R ++TG HTVAD+ C
Sbjct: 13  VYSCKYCQTHFAVTNDIISKSFHCKHGRAYLFDNVVNVTVGEKEHRVMITGWHTVADIFC 72

Query: 69  VDCREVLGWKYERAYEASQKYKEGKFILEKSKIV 103
           V C  ++GWKYE AY+ SQKYKEGKFILE+ K++
Sbjct: 73  VSCGSLVGWKYEIAYDKSQKYKEGKFILERFKVL 106

The following BLAST results are available for this feature:

BLAST of Carg14001 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022958298.1	2.6e-57	100.00	protein yippee-like At4g27745 [Cucurbita moschata] >XP_022958299.1 protein yippe...	[more]
XP_022922143.1	1.3e-56	99.06	protein yippee-like At4g27745 [Cucurbita moschata] >XP_022922144.1 protein yippe...	[more]
XP_004145943.1	3.8e-56	98.11	protein yippee-like At4g27745 isoform X3 [Cucumis sativus] >XP_008437624.1 PREDI...	[more]
KAG6605800.1	4.9e-56	100.00	Protein yippee-like protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022138242.1	9.3e-55	96.23	protein yippee-like At4g27745 [Momordica charantia] >XP_022138243.1 protein yipp...	[more]

BLAST of Carg14001 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9T096	7.1e-50	82.08	Protein yippee-like At4g27745 OS=Arabidopsis thaliana OX=3702 GN=At4g27745 PE=3 ...	[more]
A6QPH8	2.3e-32	59.18	Protein yippee-like 3 OS=Bos taurus OX=9913 GN=YPEL3 PE=3 SV=2	[more]
Q65Z57	2.3e-32	59.18	Protein yippee-like 3 OS=Chlorocebus aethiops OX=9534 GN=YPEL3 PE=3 SV=1	[more]
P61236	2.3e-32	59.18	Protein yippee-like 3 OS=Homo sapiens OX=9606 GN=YPEL3 PE=2 SV=1	[more]
P61237	2.3e-32	59.18	Protein yippee-like 3 OS=Mus musculus OX=10090 GN=Ypel3 PE=1 SV=1	[more]

BLAST of Carg14001 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H4Q3	1.3e-57	100.00	Protein yippee-like OS=Cucurbita moschata OX=3662 GN=LOC111459562 PE=3 SV=1	[more]
A0A6J1KA57	6.3e-57	99.06	Protein yippee-like OS=Cucurbita maxima OX=3661 GN=LOC111491497 PE=3 SV=1	[more]
A0A6J1E2J3	6.3e-57	99.06	Protein yippee-like OS=Cucurbita moschata OX=3662 GN=LOC111430209 PE=3 SV=1	[more]
A0A1S3AUL4	1.8e-56	98.11	Protein yippee-like OS=Cucumis melo OX=3656 GN=LOC103482979 PE=3 SV=1	[more]
A0A5A7TKR3	1.8e-56	98.11	Protein yippee-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G...	[more]

BLAST of Carg14001 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G27745.1	5.1e-51	82.08	Yippee family putative zinc-binding protein	[more]
AT3G08990.1	3.2e-29	58.51	Yippee family putative zinc-binding protein	[more]
AT3G11230.1	3.2e-29	56.52	Yippee family putative zinc-binding protein	[more]
AT3G11230.2	3.2e-29	56.52	Yippee family putative zinc-binding protein	[more]
AT3G08990.2	3.2e-29	58.51	Yippee family putative zinc-binding protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004910	Yippee/Mis18/Cereblon	PFAM	PF03226	Yippee-Mis18	coord: 10..101 e-value: 2.1E-15 score: 56.8
None	No IPR available	PANTHER	PTHR13848:SF71	PROTEIN YIPPEE-LIKE	coord: 1..106
IPR039058	Yippee family	PANTHER	PTHR13848	PROTEIN YIPPEE-LIKE CG15309-RELATED	coord: 1..106
IPR034751	Yippee domain	PROSITE	PS51792	YIPPEE	coord: 8..105 score: 51.486034

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg14001-RA	Carg14001-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046872	metal ion binding