
Carg13986 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGATTCTGAAAACGTTCAAGCAAGACGACGGATCAGATCTCGCCATCAGGCGGAGGAACGAGGAGCTCGAGAAGGAGCTTCAGGCCAGCCGCGAAAGAGAGCAGGTGATGCGGCAGCAGCTACAAAGAGCCTGCGAGAGGCTCAAGGTCGCCGAGGAGGCCGAAGAGAGGCTGTCCTCTCAACTCGGAGAACTCGAGGCGGAGGCGCTCACGCAGGCCCGCGATTACCACCACCAAATCGCGGCGTTGATGAACCAGCTCTCGCAGGCTCAGAAACTGCTGCAGATCCGACTGCAACAACCGCAACTCCAATCTGCCTCTGTCTAG ATGGGGATTCTGAAAACGTTCAAGCAAGACGACGGATCAGATCTCGCCATCAGGCGGAGGAACGAGGAGCTCGAGAAGGAGCTTCAGGCCAGCCGCGAAAGAGAGCAGGTGATGCGGCAGCAGCTACAAAGAGCCTGCGAGAGGCTCAAGGTCGCCGAGGAGGCCGAAGAGAGGCTGTCCTCTCAACTCGGAGAACTCGAGGCGGAGGCGCTCACGCAGGCCCGCGATTACCACCACCAAATCGCGGCGTTGATGAACCAGCTCTCGCAGGCTCAGAAACTGCTGCAGATCCGACTGCAACAACCGCAACTCCAATCTGCCTCTGTCTAG ATGGGGATTCTGAAAACGTTCAAGCAAGACGACGGATCAGATCTCGCCATCAGGCGGAGGAACGAGGAGCTCGAGAAGGAGCTTCAGGCCAGCCGCGAAAGAGAGCAGGTGATGCGGCAGCAGCTACAAAGAGCCTGCGAGAGGCTCAAGGTCGCCGAGGAGGCCGAAGAGAGGCTGTCCTCTCAACTCGGAGAACTCGAGGCGGAGGCGCTCACGCAGGCCCGCGATTACCACCACCAAATCGCGGCGTTGATGAACCAGCTCTCGCAGGCTCAGAAACTGCTGCAGATCCGACTGCAACAACCGCAACTCCAATCTGCCTCTGTCTAG MGILKTFKQDDGSDLAIRRRNEELEKELQASREREQVMRQQLQRACERLKVAEEAEERLSSQLGELEAEALTQARDYHHQIAALMNQLSQAQKLLQIRLQQPQLQSASV Homology
BLAST of Carg13986 vs. NCBI nr
Match: KAG6605817.1 (Protein RESPONSE TO LOW SULFUR 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035779.1 Protein RESPONSE TO LOW SULFUR 2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 191.4 bits (485), Expect = 4.0e-45 Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0
BLAST of Carg13986 vs. NCBI nr
Match: XP_022957699.1 (uncharacterized protein LOC111459164 [Cucurbita moschata]) HSP 1 Score: 191.4 bits (485), Expect = 4.0e-45 Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0
BLAST of Carg13986 vs. NCBI nr
Match: XP_022996267.1 (protein RESPONSE TO LOW SULFUR 2-like [Cucurbita maxima]) HSP 1 Score: 190.3 bits (482), Expect = 8.9e-45 Identity = 108/109 (99.08%), Postives = 109/109 (100.00%), Query Frame = 0
BLAST of Carg13986 vs. NCBI nr
Match: XP_023533740.1 (protein RESPONSE TO LOW SULFUR 2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 185.7 bits (470), Expect = 2.2e-43 Identity = 107/109 (98.17%), Postives = 107/109 (98.17%), Query Frame = 0
BLAST of Carg13986 vs. NCBI nr
Match: XP_038875209.1 (protein RESPONSE TO LOW SULFUR 2-like [Benincasa hispida]) HSP 1 Score: 123.6 bits (309), Expect = 1.0e-24 Identity = 73/96 (76.04%), Postives = 84/96 (87.50%), Query Frame = 0
BLAST of Carg13986 vs. ExPASy Swiss-Prot
Match: Q9FIR9 (Protein RESPONSE TO LOW SULFUR 2 OS=Arabidopsis thaliana OX=3702 GN=LSU2 PE=1 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 1.4e-08 Identity = 38/74 (51.35%), Postives = 53/74 (71.62%), Query Frame = 0
BLAST of Carg13986 vs. ExPASy Swiss-Prot
Match: Q9SCK2 (Protein RESPONSE TO LOW SULFUR 3 OS=Arabidopsis thaliana OX=3702 GN=LSU3 PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 1.8e-08 Identity = 38/74 (51.35%), Postives = 52/74 (70.27%), Query Frame = 0
BLAST of Carg13986 vs. ExPASy Swiss-Prot
Match: Q8L8S2 (Protein RESPONSE TO LOW SULFUR 4 OS=Arabidopsis thaliana OX=3702 GN=LSU4 PE=2 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 2.0e-07 Identity = 37/74 (50.00%), Postives = 51/74 (68.92%), Query Frame = 0
BLAST of Carg13986 vs. ExPASy Swiss-Prot
Match: Q9SCK1 (Protein RESPONSE TO LOW SULFUR 1 OS=Arabidopsis thaliana OX=3702 GN=LSU1 PE=1 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 2.2e-06 Identity = 35/74 (47.30%), Postives = 50/74 (67.57%), Query Frame = 0
BLAST of Carg13986 vs. ExPASy TrEMBL
Match: A0A6J1H2Q6 (uncharacterized protein LOC111459164 OS=Cucurbita moschata OX=3662 GN=LOC111459164 PE=4 SV=1) HSP 1 Score: 191.4 bits (485), Expect = 1.9e-45 Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0
BLAST of Carg13986 vs. ExPASy TrEMBL
Match: A0A6J1K1F9 (protein RESPONSE TO LOW SULFUR 2-like OS=Cucurbita maxima OX=3661 GN=LOC111491545 PE=4 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 4.3e-45 Identity = 108/109 (99.08%), Postives = 109/109 (100.00%), Query Frame = 0
BLAST of Carg13986 vs. ExPASy TrEMBL
Match: A0A5A7TLR6 (Ribonuclease Y-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00160 PE=4 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 7.9e-23 Identity = 69/96 (71.88%), Postives = 80/96 (83.33%), Query Frame = 0
BLAST of Carg13986 vs. ExPASy TrEMBL
Match: A0A1S3AV51 (uncharacterized protein LOC103482998 OS=Cucumis melo OX=3656 GN=LOC103482998 PE=4 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 7.9e-23 Identity = 69/96 (71.88%), Postives = 80/96 (83.33%), Query Frame = 0
BLAST of Carg13986 vs. ExPASy TrEMBL
Match: A0A0A0KN32 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139070 PE=4 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 1.4e-22 Identity = 68/96 (70.83%), Postives = 79/96 (82.29%), Query Frame = 0
BLAST of Carg13986 vs. TAIR 10
Match: AT5G24660.1 (response to low sulfur 2 ) HSP 1 Score: 60.5 bits (145), Expect = 9.9e-10 Identity = 38/74 (51.35%), Postives = 53/74 (71.62%), Query Frame = 0
BLAST of Carg13986 vs. TAIR 10
Match: AT3G49570.1 (response to low sulfur 3 ) HSP 1 Score: 60.1 bits (144), Expect = 1.3e-09 Identity = 38/74 (51.35%), Postives = 52/74 (70.27%), Query Frame = 0
BLAST of Carg13986 vs. TAIR 10
Match: AT5G24655.1 (response to low sulfur 4 ) HSP 1 Score: 56.6 bits (135), Expect = 1.4e-08 Identity = 37/74 (50.00%), Postives = 51/74 (68.92%), Query Frame = 0
BLAST of Carg13986 vs. TAIR 10
Match: AT3G49580.1 (response to low sulfur 1 ) HSP 1 Score: 53.1 bits (126), Expect = 1.6e-07 Identity = 35/74 (47.30%), Postives = 50/74 (67.57%), Query Frame = 0
BLAST of Carg13986 vs. TAIR 10
Match: AT3G49580.2 (response to low sulfur 1 ) HSP 1 Score: 42.7 bits (99), Expect = 2.1e-04 Identity = 27/61 (44.26%), Postives = 42/61 (68.85%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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