Carg13955 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGATTTCAGATCCAAATCTTGCAGAGAAGGCAGAATGCAGATTGAAAGCTACTATGAGAACAAAGCTGCCCCAACAAACATGCAAGATCTGAGGTCTTACAGTGTCAGCTATGCAGGTTCTGTGCAGCAGCAGCAAAATCAACCAGACAAAGAGATGAAAATGAAGAAACCCAAAAGCAATATGGGGTCAACTTCTAAAAGCTGGAGTTTCAAGGATCCAGAACTGCAGAGGAAGACAAGGGTTGCTGGATATAAGGTTTATGCAGTGGAAGGGAAGATGAAAGGGTCTCTGAGAAAGAGTTTCAGGTGGATTAAGAACACTTACACTCATGTAATCTATGGATGGAGGTGA ATGGAGGATTTCAGATCCAAATCTTGCAGAGAAGGCAGAATGCAGATTGAAAGCTACTATGAGAACAAAGCTGCCCCAACAAACATGCAAGATCTGAGGTCTTACAGTGTCAGCTATGCAGGTTCTGTGCAGCAGCAGCAAAATCAACCAGACAAAGAGATGAAAATGAAGAAACCCAAAAGCAATATGGGGTCAACTTCTAAAAGCTGGAGTTTCAAGGATCCAGAACTGCAGAGGAAGACAAGGGTTGCTGGATATAAGGTTTATGCAGTGGAAGGGAAGATGAAAGGGTCTCTGAGAAAGAGTTTCAGGTGGATTAAGAACACTTACACTCATGTAATCTATGGATGGAGGTGA ATGGAGGATTTCAGATCCAAATCTTGCAGAGAAGGCAGAATGCAGATTGAAAGCTACTATGAGAACAAAGCTGCCCCAACAAACATGCAAGATCTGAGGTCTTACAGTGTCAGCTATGCAGGTTCTGTGCAGCAGCAGCAAAATCAACCAGACAAAGAGATGAAAATGAAGAAACCCAAAAGCAATATGGGGTCAACTTCTAAAAGCTGGAGTTTCAAGGATCCAGAACTGCAGAGGAAGACAAGGGTTGCTGGATATAAGGTTTATGCAGTGGAAGGGAAGATGAAAGGGTCTCTGAGAAAGAGTTTCAGGTGGATTAAGAACACTTACACTCATGTAATCTATGGATGGAGGTGA MEDFRSKSCREGRMQIESYYENKAAPTNMQDLRSYSVSYAGSVQQQQNQPDKEMKMKKPKSNMGSTSKSWSFKDPELQRKTRVAGYKVYAVEGKMKGSLRKSFRWIKNTYTHVIYGWR Homology
BLAST of Carg13955 vs. NCBI nr
Match: XP_022964102.1 (uncharacterized protein LOC111464234 [Cucurbita moschata] >KAG6593530.1 hypothetical protein SDJN03_13006, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025874.1 hypothetical protein SDJN02_12372, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 238.4 bits (607), Expect = 3.1e-59 Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0
BLAST of Carg13955 vs. NCBI nr
Match: XP_023513621.1 (uncharacterized protein LOC111778170 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 232.3 bits (591), Expect = 2.2e-57 Identity = 118/123 (95.93%), Postives = 118/123 (95.93%), Query Frame = 0
BLAST of Carg13955 vs. NCBI nr
Match: XP_023000635.1 (uncharacterized protein LOC111494881 [Cucurbita maxima]) HSP 1 Score: 231.1 bits (588), Expect = 4.9e-57 Identity = 117/123 (95.12%), Postives = 118/123 (95.93%), Query Frame = 0
BLAST of Carg13955 vs. NCBI nr
Match: XP_022953831.1 (uncharacterized protein LOC111456246 [Cucurbita moschata] >XP_023548779.1 uncharacterized protein LOC111807334 [Cucurbita pepo subsp. pepo] >KAG6575464.1 hypothetical protein SDJN03_26103, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014008.1 hypothetical protein SDJN02_24178, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 208.4 bits (529), Expect = 3.4e-50 Identity = 106/118 (89.83%), Postives = 111/118 (94.07%), Query Frame = 0
BLAST of Carg13955 vs. NCBI nr
Match: XP_022992449.1 (uncharacterized protein LOC111488749 [Cucurbita maxima]) HSP 1 Score: 206.8 bits (525), Expect = 1.0e-49 Identity = 105/118 (88.98%), Postives = 110/118 (93.22%), Query Frame = 0
BLAST of Carg13955 vs. ExPASy TrEMBL
Match: A0A6J1HGX0 (uncharacterized protein LOC111464234 OS=Cucurbita moschata OX=3662 GN=LOC111464234 PE=4 SV=1) HSP 1 Score: 238.4 bits (607), Expect = 1.5e-59 Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0
BLAST of Carg13955 vs. ExPASy TrEMBL
Match: A0A6J1KIX1 (uncharacterized protein LOC111494881 OS=Cucurbita maxima OX=3661 GN=LOC111494881 PE=4 SV=1) HSP 1 Score: 231.1 bits (588), Expect = 2.4e-57 Identity = 117/123 (95.12%), Postives = 118/123 (95.93%), Query Frame = 0
BLAST of Carg13955 vs. ExPASy TrEMBL
Match: A0A6J1GP67 (uncharacterized protein LOC111456246 OS=Cucurbita moschata OX=3662 GN=LOC111456246 PE=4 SV=1) HSP 1 Score: 208.4 bits (529), Expect = 1.7e-50 Identity = 106/118 (89.83%), Postives = 111/118 (94.07%), Query Frame = 0
BLAST of Carg13955 vs. ExPASy TrEMBL
Match: A0A6J1JXK5 (uncharacterized protein LOC111488749 OS=Cucurbita maxima OX=3661 GN=LOC111488749 PE=4 SV=1) HSP 1 Score: 206.8 bits (525), Expect = 4.8e-50 Identity = 105/118 (88.98%), Postives = 110/118 (93.22%), Query Frame = 0
BLAST of Carg13955 vs. ExPASy TrEMBL
Match: A0A6J1DNJ8 (uncharacterized protein LOC111022282 OS=Momordica charantia OX=3673 GN=LOC111022282 PE=4 SV=1) HSP 1 Score: 203.8 bits (517), Expect = 4.1e-49 Identity = 103/117 (88.03%), Postives = 110/117 (94.02%), Query Frame = 0
BLAST of Carg13955 vs. TAIR 10
Match: AT5G11970.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 97.1 bits (240), Expect = 1.0e-20 Identity = 60/118 (50.85%), Postives = 73/118 (61.86%), Query Frame = 0
BLAST of Carg13955 vs. TAIR 10
Match: AT2G19460.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 89.0 bits (219), Expect = 2.8e-18 Identity = 53/116 (45.69%), Postives = 68/116 (58.62%), Query Frame = 0
BLAST of Carg13955 vs. TAIR 10
Match: AT3G13910.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 79.0 bits (193), Expect = 2.9e-15 Identity = 46/95 (48.42%), Postives = 61/95 (64.21%), Query Frame = 0
BLAST of Carg13955 vs. TAIR 10
Match: AT1G72720.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 68.6 bits (166), Expect = 4.0e-12 Identity = 48/125 (38.40%), Postives = 67/125 (53.60%), Query Frame = 0
BLAST of Carg13955 vs. TAIR 10
Match: AT3G62640.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 62.8 bits (151), Expect = 2.2e-10 Identity = 33/82 (40.24%), Postives = 47/82 (57.32%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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