Carg13949 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg13949
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	PHD finger protein ALFIN-LIKE 3-like
Location	Carg_Chr08: 4289205 .. 4291997 (-)
RNA-Seq Expression	Carg13949
Synteny	Carg13949

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCATCAAATTCAAATTTCCCGTTTCACGATCGATGCCATATATTCAATCTTCGCTAATTGATTCTCTGTCTCTCTGTCTCTCCGTTTTGGTAATCTCCAGTTTTTATTTTCCTTTTTGACTCAATTTCGTCTCGAGAAGGTGCAAGAACGACCAAGAAGAAACGGCAATGGATGGAGGTGGCGCAGTGCATAATCGTTCAGTCGAAGATGTTTTCAGTGATTTTAGAGGCCGAAGAAGTGGCGTCATCAAAGCCCTCACCGTAGGTATTCCTCTTTCCTTTTCTTGTTGACTCGTATTCGGACAAGGATAAAACCAGGCGCGATTGAAATTCATTGTATGTTTTTGCTGTTTTCATGGCCTTAGTACGTATTTTATGTCCTTCTTCCTCCATTTTGGAATGAATTTTTTTACTTTTCGTTGTTTTTTCGTTGATTTTGGCGTTTTTGTTCGTGATGTTGCCGTTTGGTTTTTCTTTTTTGAGAGAGAGAACGGAAGTGCTTTGTGAATGAGGAGTAATTAGGATAAGAGAAAATGTGTTTTCTAATGCTCTTCTTGGCTTACTTGAGTGTGGCCGTGCAATTATGAATCTCACTCTAGTTTTCCACTGTATAAGCGTTGAAATTGCATGATGAATTTTGTTCCTGAACGTGGATCGATTTCTTCTTGTCGATTTGTGTACATGCATGGCCGTCTGCATACGGTGAGACATAAGAGAGCGACGGAGTATTCCTATTGTAGCCAGAGAGAGCTCTCTTCCTTTGCCTGCATTTTTTAAGTTTATGCAACTAATTTCTTGATCATATCTGATACTTTTTGCGAGTCGATGCAAACCTAAAAGTTCATGATCTTGTATAGTTTGTTAAAGATTTTTATTTCAATCGAAGAATTTTGTGTTTGGATGAAGTATTAGATAAATGTAGAATGTAAACGGCTGGATTCTTTATTTCTGGAACCCTCATTGAGAGTTAGGTTGTTTGGACCTTGGCTTTTGGCTTCATTTGGGAGTTTCGAATGTCTAATTCTTCTCAGTTTTATCATTGCAGATGTTGAAGAGTTTTATCAACAATGTGATCCTGGTACATGCTTTTAGTTATCTCTGTTTACATCTTATCTTTTAAGACACGAATTCATTGTGTATGGGGCTCTCCTTGTTATCTGGAATATGAACTTTTGATTCCACCCCCATCGACGCAATTCTGTGTGCTACCATCCCAATTTTCGATTTCATATTTGTAGTCTTTAGTTTAGCGATCCCTTAGCTATTTATAACCGTTTTTTGGTGACTACAGAGAAGGAAAATCTATGCTTGTATGGTTTTCCAAATGAAGTATGGGAAGTTAATTTACCTGCTGAAGAAGTACCTCCAGAACTCCCTGAGCCAGCATTGGGTATTAATTTTGCAAGAGATGGTATGCAAGAAAGGGATTGGTTGGCTTTGGTTGCTGTCCATAGCGATTCTTGGTTGCTCTCTGTTGCCTATTATTTTGGTGCGAGATTTGGATTTGATAAAGCTGATAGGTATTTCATTTTGAATTTAGTGTTCAAATTGGAGTTATTTCAACAATCATGATTGTTGGCCCTGCTATAAAATGGTTTGCCTTGTTTTTTTGATGCAGGAGGCGGCTTTTTAATATGATAAACGATTTGCCAACTGTATTTGAAGTAGTCACTGGTGTTGCAAAGAAACCAGTCAAGGAAAAGTCGTCGAGTGCTAATGGTAGCAGATCCAAGTCCAACTTTAAAACGGTATGCTGATAGATCTTCAGTTTTGTAGTTGGTTGACTGATTTTATTTGTTCTACGCTATTCTGATTACTATTGTTTCGATCTCGTAGTTGTAACAAACAATGTAGCTTTTAGGTGTTTCCCCTGCCTCTACATATAGAAAAAGAATGTAGCTGGGACAATTATCTTAAGCTATAATAATGTTTATAGTTCTGGTGGACAATCTCCAATTCTTGGGGGTTGGTTTACCTACTTGAGATTTGGAAATTCAAATGAAAAAGGAAATAGAAAAAGAAGTAAATTCCTTTCGAGTTTTGCCTTCACCCTTCCATGCACCCGCCTTAGGCAAGGCTGATCCCACGGCTAAGATAGTCGTTCCAGAGGTCACGCAGCAGCTTCCAGGCAAATCCTGCCAATTCATGTCATGATTTATAATCTGTATTGCTAGAAATGAATTTATTTTGATCTCTTCTGTACCGTATGACTCAGTCAGACTCGGTTATTTCCTCTCCTCCTACTCGAGAACGAAATTGATACCCCAAGACATATTGTTGCTACTTGTTGGTCTGATACAATTTTACAGCATCAATTACATGGATTATTTACTTCATCCTAATGTTTCAACTATTTTCAGAGGGAAGCTGAAATCCATGGAATGTATTCAAGGCAACCGCAGTCAAGGGAAGAGGTAGAGGCCTTGTACCAAGAAGACGAAGACGAGCACGGAGACACGTTGTGTGGGGCATGTGGTGAGAATTATGCATCAGATGAATTTTGGATTTGCTGTGATATCTGCGAGAAGTGGTTCCATGGTAAATGCGTGAGAATAACTCCTGCCAAAGCAGAGCACATCAAGCAGTACAAATGCCCATCCTGCAGCCACAAGAGAGGCCGCGTTTAAGGCAGGCAGGCAGGCAGACCAAATGCAAAACTGTGGTGTTATTTTCATCTTCCTTTTGGTTAATGGAATCAGCGACAAGGTAAGTGCTTTGCTTTAGACTACTTCAGGTATCCAGTTTTGGGTAACTCTCAATGCCTTCCCTTGTTCCTTATATGTAAAGTCTAG

mRNA sequence

CTTCATCAAATTCAAATTTCCCGTTTCACGATCGATGCCATATATTCAATCTTCGCTAATTGATTCTCTGTCTCTCTGTCTCTCCGTTTTGGTAATCTCCAGTTTTTATTTTCCTTTTTGACTCAATTTCGTCTCGAGAAGGTGCAAGAACGACCAAGAAGAAACGGCAATGGATGGAGGTGGCGCAGTGCATAATCGTTCAGTCGAAGATGTTTTCAGTGATTTTAGAGGCCGAAGAAGTGGCGTCATCAAAGCCCTCACCGTAGATGTTGAAGAGTTTTATCAACAATGTGATCCTGAGAAGGAAAATCTATGCTTGTATGGTTTTCCAAATGAAGTATGGGAAGTTAATTTACCTGCTGAAGAAGTACCTCCAGAACTCCCTGAGCCAGCATTGGGTATTAATTTTGCAAGAGATGGTATGCAAGAAAGGGATTGGTTGGCTTTGGTTGCTGTCCATAGCGATTCTTGGTTGCTCTCTGTTGCCTATTATTTTGGTGCGAGATTTGGATTTGATAAAGCTGATAGGAGGCGGCTTTTTAATATGATAAACGATTTGCCAACTGTATTTGAAGTAGTCACTGGTGTTGCAAAGAAACCAGTCAAGGAAAAGTCGTCGAGTGCTAATGGTAGCAGATCCAAGTCCAACTTTAAAACGAGGGAAGCTGAAATCCATGGAATGTATTCAAGGCAACCGCAGTCAAGGGAAGAGCGACAAGGTAAGTGCTTTGCTTTAGACTACTTCAGGTATCCAGTTTTGGGTAACTCTCAATGCCTTCCCTTGTTCCTTATATGTAAAGTCTAG

Coding sequence (CDS)

ATGGATGGAGGTGGCGCAGTGCATAATCGTTCAGTCGAAGATGTTTTCAGTGATTTTAGAGGCCGAAGAAGTGGCGTCATCAAAGCCCTCACCGTAGATGTTGAAGAGTTTTATCAACAATGTGATCCTGAGAAGGAAAATCTATGCTTGTATGGTTTTCCAAATGAAGTATGGGAAGTTAATTTACCTGCTGAAGAAGTACCTCCAGAACTCCCTGAGCCAGCATTGGGTATTAATTTTGCAAGAGATGGTATGCAAGAAAGGGATTGGTTGGCTTTGGTTGCTGTCCATAGCGATTCTTGGTTGCTCTCTGTTGCCTATTATTTTGGTGCGAGATTTGGATTTGATAAAGCTGATAGGAGGCGGCTTTTTAATATGATAAACGATTTGCCAACTGTATTTGAAGTAGTCACTGGTGTTGCAAAGAAACCAGTCAAGGAAAAGTCGTCGAGTGCTAATGGTAGCAGATCCAAGTCCAACTTTAAAACGAGGGAAGCTGAAATCCATGGAATGTATTCAAGGCAACCGCAGTCAAGGGAAGAGCGACAAGGTAAGTGCTTTGCTTTAGACTACTTCAGGTATCCAGTTTTGGGTAACTCTCAATGCCTTCCCTTGTTCCTTATATGTAAAGTCTAG

Protein sequence

MDGGGAVHNRSVEDVFSDFRGRRSGVIKALTVDVEEFYQQCDPEKENLCLYGFPNEVWEVNLPAEEVPPELPEPALGINFARDGMQERDWLALVAVHSDSWLLSVAYYFGARFGFDKADRRRLFNMINDLPTVFEVVTGVAKKPVKEKSSSANGSRSKSNFKTREAEIHGMYSRQPQSREERQGKCFALDYFRYPVLGNSQCLPLFLICKV

Homology

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BLAST of Carg13949 vs. NCBI nr
Match: KAG7025880.1 (PHD finger protein ALFIN-LIKE 5 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 436.4 bits (1121), Expect = 1.4e-118
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 1   MDGGGAVHNRSVEDVFSDFRGRRSGVIKALTVDVEEFYQQCDPEKENLCLYGFPNEVWEV 60
           MDGGGAVHNRSVEDVFSDFRGRRSGVIKALTVDVEEFYQQCDPEKENLCLYGFPNEVWEV
Sbjct: 1   MDGGGAVHNRSVEDVFSDFRGRRSGVIKALTVDVEEFYQQCDPEKENLCLYGFPNEVWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQERDWLALVAVHSDSWLLSVAYYFGARFGFDKADR 120
           NLPAEEVPPELPEPALGINFARDGMQERDWLALVAVHSDSWLLSVAYYFGARFGFDKADR
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQERDWLALVAVHSDSWLLSVAYYFGARFGFDKADR 120

Query: 121 RRLFNMINDLPTVFEVVTGVAKKPVKEKSSSANGSRSKSNFKTREAEIHGMYSRQPQSRE 180
           RRLFNMINDLPTVFEVVTGVAKKPVKEKSSSANGSRSKSNFKTREAEIHGMYSRQPQSRE
Sbjct: 121 RRLFNMINDLPTVFEVVTGVAKKPVKEKSSSANGSRSKSNFKTREAEIHGMYSRQPQSRE 180

Query: 181 ERQGKCFALDYFRYPVLGNSQCLPLFLICKV 212
           ERQGKCFALDYFRYPVLGNSQCLPLFLICKV
Sbjct: 181 ERQGKCFALDYFRYPVLGNSQCLPLFLICKV 211

[Close]

BLAST of Carg13949 vs. NCBI nr
Match: XP_023000582.1 (PHD finger protein ALFIN-LIKE 3-like [Cucurbita maxima])

HSP 1 Score: 370.5 bits (950), Expect = 9.3e-99
Identity = 180/181 (99.45%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MDGGGAVHNRSVEDVFSDFRGRRSGVIKALTVDVEEFYQQCDPEKENLCLYGFPNEVWEV 60
           MDGGGAVHNRSVEDVFSDFRGRRSGVIKALTVDVEEFYQQCDPEKENLCLYGFPNEVWEV
Sbjct: 3   MDGGGAVHNRSVEDVFSDFRGRRSGVIKALTVDVEEFYQQCDPEKENLCLYGFPNEVWEV 62

Query: 61  NLPAEEVPPELPEPALGINFARDGMQERDWLALVAVHSDSWLLSVAYYFGARFGFDKADR 120
           NLPAEEVPPELPEPALGINFARDGMQERDWLALVAVHSDSWLLSVAYYFGARFGFDKADR
Sbjct: 63  NLPAEEVPPELPEPALGINFARDGMQERDWLALVAVHSDSWLLSVAYYFGARFGFDKADR 122

Query: 121 RRLFNMINDLPTVFEVVTGVAKKPVKEKSSSANGSRSKSNFKTREAEIHGMYSRQPQSRE 180
           RRLFNMINDLPTVFEVVTGVAKKPVKEKSSSANGSRSKSNFKTREAEIHGMYSRQPQ+RE
Sbjct: 123 RRLFNMINDLPTVFEVVTGVAKKPVKEKSSSANGSRSKSNFKTREAEIHGMYSRQPQARE 182

Query: 181 E 182
           E
Sbjct: 183 E 183

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BLAST of Carg13949 vs. NCBI nr
Match: KAG6593538.1 (PHD finger protein ALFIN-LIKE 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 370.5 bits (950), Expect = 9.3e-99
Identity = 180/181 (99.45%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MDGGGAVHNRSVEDVFSDFRGRRSGVIKALTVDVEEFYQQCDPEKENLCLYGFPNEVWEV 60
           MDGGGAVHNRSVEDVFSDFRGRRSGVIKALTVDVEEFYQQCDPEKENLCLYGFPNEVWEV
Sbjct: 1   MDGGGAVHNRSVEDVFSDFRGRRSGVIKALTVDVEEFYQQCDPEKENLCLYGFPNEVWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQERDWLALVAVHSDSWLLSVAYYFGARFGFDKADR 120
           NLPAEEVPPELPEPALGINFARDGMQERDWLALVAVHSDSWLLSVAYYFGARFGFDKADR
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQERDWLALVAVHSDSWLLSVAYYFGARFGFDKADR 120

Query: 121 RRLFNMINDLPTVFEVVTGVAKKPVKEKSSSANGSRSKSNFKTREAEIHGMYSRQPQSRE 180
           RRLFNMINDLPTVFEVVTGVAKKPVKEKSSSANGSRSKSNFKTREAEIHGMYSRQPQ+RE
Sbjct: 121 RRLFNMINDLPTVFEVVTGVAKKPVKEKSSSANGSRSKSNFKTREAEIHGMYSRQPQARE 180

Query: 181 E 182
           E
Sbjct: 181 E 181

[Close]

BLAST of Carg13949 vs. NCBI nr
Match: XP_022964198.1 (PHD finger protein ALFIN-LIKE 3-like [Cucurbita moschata])

HSP 1 Score: 370.5 bits (950), Expect = 9.3e-99
Identity = 180/181 (99.45%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MDGGGAVHNRSVEDVFSDFRGRRSGVIKALTVDVEEFYQQCDPEKENLCLYGFPNEVWEV 60
           MDGGGAVHNRSVEDVFSDFRGRRSGVIKALTVDVEEFYQQCDPEKENLCLYGFPNEVWEV
Sbjct: 1   MDGGGAVHNRSVEDVFSDFRGRRSGVIKALTVDVEEFYQQCDPEKENLCLYGFPNEVWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQERDWLALVAVHSDSWLLSVAYYFGARFGFDKADR 120
           NLPAEEVPPELPEPALGINFARDGMQERDWLALVAVHSDSWLLSVAYYFGARFGFDKADR
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQERDWLALVAVHSDSWLLSVAYYFGARFGFDKADR 120

Query: 121 RRLFNMINDLPTVFEVVTGVAKKPVKEKSSSANGSRSKSNFKTREAEIHGMYSRQPQSRE 180
           RRLFNMINDLPTVFEVVTGVAKKPVKEKSSSANGSRSKSNFKTREAEIHGMYSRQPQ+RE
Sbjct: 121 RRLFNMINDLPTVFEVVTGVAKKPVKEKSSSANGSRSKSNFKTREAEIHGMYSRQPQARE 180

Query: 181 E 182
           E
Sbjct: 181 E 181

[Close]

BLAST of Carg13949 vs. NCBI nr
Match: XP_023514184.1 (PHD finger protein ALFIN-LIKE 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 369.0 bits (946), Expect = 2.7e-98
Identity = 179/181 (98.90%), Postives = 180/181 (99.45%), Query Frame = 0


Query: 1   MDGGGAVHNRSVEDVFSDFRGRRSGVIKALTVDVEEFYQQCDPEKENLCLYGFPNEVWEV 60
           MDGGGAVHNRSVEDVFSDFRGRRSGVIKALTVDVEEFYQQCDPEKENLCLYGFPNEVWEV
Sbjct: 1   MDGGGAVHNRSVEDVFSDFRGRRSGVIKALTVDVEEFYQQCDPEKENLCLYGFPNEVWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQERDWLALVAVHSDSWLLSVAYYFGARFGFDKADR 120
           NLPAEEVPPELPEPALGINFARDGMQERDWLALVAVHSDSWLLSVAYYFGARFGFDKADR
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQERDWLALVAVHSDSWLLSVAYYFGARFGFDKADR 120

Query: 121 RRLFNMINDLPTVFEVVTGVAKKPVKEKSSSANGSRSKSNFKTREAEIHGMYSRQPQSRE 180
           RRLFNMINDLPTVFEVVTGVAKKP KEKSSSANGSRSKSNFKTREAEIHGMYSRQPQ+RE
Sbjct: 121 RRLFNMINDLPTVFEVVTGVAKKPAKEKSSSANGSRSKSNFKTREAEIHGMYSRQPQARE 180

Query: 181 E 182
           E
Sbjct: 181 E 181

[Close]

BLAST of Carg13949 vs. ExPASy Swiss-Prot
Match: Q5XEM9 (PHD finger protein ALFIN-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=AL5 PE=2 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 8.6e-71
Identity = 131/187 (70.05%), Postives = 162/187 (86.63%), Query Frame = 0


Query: 1   MDGGGAVHN-RSVEDVFSDFRGRRSGVIKALTVDVEEFYQQCDPEKENLCLYGFPNEVWE 60
           M+GG A ++ R+VE+VF DF+GRR+G+I+ALT DVE+F+QQCDPEK+NLCLYGFPNEVWE
Sbjct: 1   MEGGTAHYSPRTVEEVFRDFKGRRAGIIQALTTDVEDFFQQCDPEKQNLCLYGFPNEVWE 60

Query: 61  VNLPAEEVPPELPEPALGINFARDGMQERDWLALVAVHSDSWLLSVAYYFGARFGFDKAD 120
           VNLPAEEVPPELPEPALGINFARDGMQER+WL+LVAVHSD+WLLSV++YFG+RFGFD+AD
Sbjct: 61  VNLPAEEVPPELPEPALGINFARDGMQERNWLSLVAVHSDAWLLSVSFYFGSRFGFDRAD 120

Query: 121 RRRLFNMINDLPTVFEVVTGVAKKPVKEKSSSA--NGSRSKSNFKTREAEIHGMYSRQPQ 180
           R+RLF+MIN++PTV+EVVTG A+K  KE  SSA  NG+RSKSN K R  E     S+   
Sbjct: 121 RKRLFSMINEVPTVYEVVTGNAEKQTKEMPSSANQNGNRSKSNSKMRGLE--SKSSKTIH 180

Query: 181 SREERQG 185
           +++E +G
Sbjct: 181 AKDEEEG 185

[Close]

BLAST of Carg13949 vs. ExPASy Swiss-Prot
Match: Q9M2B4 (PHD finger protein ALFIN-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=AL3 PE=1 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 1.9e-70
Identity = 121/182 (66.48%), Postives = 155/182 (85.16%), Query Frame = 0


Query: 1   MDGGGAVHN-RSVEDVFSDFRGRRSGVIKALTVDVEEFYQQCDPEKENLCLYGFPNEVWE 60
           M+GG A++N R+VE+VF DF+GRR+ ++KALT DV+EFYQQCDPEKENLCLYG PNE WE
Sbjct: 1   MEGGAALYNPRTVEEVFKDFKGRRTAIVKALTTDVQEFYQQCDPEKENLCLYGLPNEEWE 60

Query: 61  VNLPAEEVPPELPEPALGINFARDGMQERDWLALVAVHSDSWLLSVAYYFGARFGFDKAD 120
           VNLPAEEVPPELPEPALGINFARDG+ E++WL+LVA+HSD+WLLSV++YFG+RF F K +
Sbjct: 61  VNLPAEEVPPELPEPALGINFARDGLSEKEWLSLVAIHSDAWLLSVSFYFGSRFSFHKEE 120

Query: 121 RRRLFNMINDLPTVFEVVTGVAKKPVKEKSSSANGSRSKSNFKTREAEIHGMYSRQPQSR 180
           R+RLFNMIND+PT+FEVVTG+AK   K  +++ NG++SKSN K R +E     ++QP+  
Sbjct: 121 RKRLFNMINDVPTIFEVVTGMAKAKDKSSAANQNGNKSKSNSKVRTSEGKSSKTKQPKEE 180

Query: 181 EE 182
           +E
Sbjct: 181 DE 182

[Close]

BLAST of Carg13949 vs. ExPASy Swiss-Prot
Match: O81488 (PHD finger protein ALFIN-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=AL4 PE=1 SV=2)

HSP 1 Score: 264.2 bits (674), Expect = 1.2e-69
Identity = 129/186 (69.35%), Postives = 157/186 (84.41%), Query Frame = 0


Query: 1   MDGGGAVHNRSVEDVFSDFRGRRSGVIKALTVDVEEFYQQCDPEKENLCLYGFPNEVWEV 60
           M+ GGA + R+VE+VF DF+GRR+G+IKALT DV+EF++ CDPEKENLCLYG PNE WEV
Sbjct: 1   MEAGGAYNPRTVEEVFRDFKGRRAGMIKALTTDVQEFFRLCDPEKENLCLYGHPNEHWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQERDWLALVAVHSDSWLLSVAYYFGARFGFDKADR 120
           NLPAEEVPPELPEP LGINFARDGM E+DWL+LVAVHSD+WLL+VA++FGARFGFDKADR
Sbjct: 61  NLPAEEVPPELPEPVLGINFARDGMAEKDWLSLVAVHSDAWLLAVAFFFGARFGFDKADR 120

Query: 121 RRLFNMINDLPTVFEVVTGVAKKPVKEKSSSANGS--RSKSNFKTREAEIHGMYSR-QPQ 180
           +RLFNM+NDLPT+FEVV G AKK  K+KSS +N S  RSKS+ K R +E    +S+ +P+
Sbjct: 121 KRLFNMVNDLPTIFEVVAGTAKKQGKDKSSVSNNSSNRSKSSSK-RGSESRAKFSKPEPK 180

Query: 181 SREERQ 184
             EE +
Sbjct: 181 DDEEEE 185

[Close]

BLAST of Carg13949 vs. ExPASy Swiss-Prot
Match: B8BJV8 (PHD finger protein ALFIN-LIKE 8 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_35671 PE=3 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 1.6e-69
Identity = 127/182 (69.78%), Postives = 151/182 (82.97%), Query Frame = 0


Query: 1   MDGGGAVHNRSVEDVFSDFRGRRSGVIKALTVDVEEFYQQCDPEKENLCLYGFPNEVWEV 60
           MDGGGA  +R+ EDVF DFR RR+G+IKALT DVE+FYQQCDPEKENLCLYG PNE WEV
Sbjct: 1   MDGGGA--HRTPEDVFRDFRARRAGMIKALTTDVEKFYQQCDPEKENLCLYGLPNETWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQERDWLALVAVHSDSWLLSVAYYFGARFGFDKADR 120
           NLPAEEVPPELPEPALGINFARDGM E+DWL+LVAVHSD+WLL+VA+YFGARFGFDK  R
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMDEKDWLSLVAVHSDTWLLAVAFYFGARFGFDKESR 120

Query: 121 RRLFNMINDLPTVFEVVTGVAKKPVKEKSSSANGSRSKSNFK-TREAEIHGMYSRQPQSR 180
           +RLF+MIN+LPT++EVVTG AKK  KEK+   +G  +KS  K +R+ E +    + P  +
Sbjct: 121 KRLFSMINNLPTIYEVVTGTAKKQSKEKTPKTSGKSNKSGTKPSRQPEPNSRGPKMPPPK 180

Query: 181 EE 182
           +E
Sbjct: 181 DE 180

[Close]

BLAST of Carg13949 vs. ExPASy Swiss-Prot
Match: Q2R837 (PHD finger protein ALFIN-LIKE 8 OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0244800 PE=2 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 1.6e-69
Identity = 127/182 (69.78%), Postives = 151/182 (82.97%), Query Frame = 0


Query: 1   MDGGGAVHNRSVEDVFSDFRGRRSGVIKALTVDVEEFYQQCDPEKENLCLYGFPNEVWEV 60
           MDGGGA  +R+ EDVF DFR RR+G+IKALT DVE+FYQQCDPEKENLCLYG PNE WEV
Sbjct: 1   MDGGGA--HRTPEDVFRDFRARRAGMIKALTTDVEKFYQQCDPEKENLCLYGLPNETWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQERDWLALVAVHSDSWLLSVAYYFGARFGFDKADR 120
           NLPAEEVPPELPEPALGINFARDGM E+DWL+LVAVHSD+WLL+VA+YFGARFGFDK  R
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMDEKDWLSLVAVHSDTWLLAVAFYFGARFGFDKESR 120

Query: 121 RRLFNMINDLPTVFEVVTGVAKKPVKEKSSSANGSRSKSNFK-TREAEIHGMYSRQPQSR 180
           +RLF+MIN+LPT++EVVTG AKK  KEK+   +G  +KS  K +R+ E +    + P  +
Sbjct: 121 KRLFSMINNLPTIYEVVTGTAKKQSKEKTPKTSGKSNKSGTKPSRQPEPNSRGPKMPPPK 180

Query: 181 EE 182
           +E
Sbjct: 181 DE 180

[Close]

BLAST of Carg13949 vs. ExPASy TrEMBL
Match: A0A6J1KE15 (PHD finger protein ALFIN-LIKE 3-like OS=Cucurbita maxima OX=3661 GN=LOC111494824 PE=3 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 4.5e-99
Identity = 180/181 (99.45%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MDGGGAVHNRSVEDVFSDFRGRRSGVIKALTVDVEEFYQQCDPEKENLCLYGFPNEVWEV 60
           MDGGGAVHNRSVEDVFSDFRGRRSGVIKALTVDVEEFYQQCDPEKENLCLYGFPNEVWEV
Sbjct: 3   MDGGGAVHNRSVEDVFSDFRGRRSGVIKALTVDVEEFYQQCDPEKENLCLYGFPNEVWEV 62

Query: 61  NLPAEEVPPELPEPALGINFARDGMQERDWLALVAVHSDSWLLSVAYYFGARFGFDKADR 120
           NLPAEEVPPELPEPALGINFARDGMQERDWLALVAVHSDSWLLSVAYYFGARFGFDKADR
Sbjct: 63  NLPAEEVPPELPEPALGINFARDGMQERDWLALVAVHSDSWLLSVAYYFGARFGFDKADR 122

Query: 121 RRLFNMINDLPTVFEVVTGVAKKPVKEKSSSANGSRSKSNFKTREAEIHGMYSRQPQSRE 180
           RRLFNMINDLPTVFEVVTGVAKKPVKEKSSSANGSRSKSNFKTREAEIHGMYSRQPQ+RE
Sbjct: 123 RRLFNMINDLPTVFEVVTGVAKKPVKEKSSSANGSRSKSNFKTREAEIHGMYSRQPQARE 182

Query: 181 E 182
           E
Sbjct: 183 E 183

[Close]

BLAST of Carg13949 vs. ExPASy TrEMBL
Match: A0A6J1HK44 (PHD finger protein ALFIN-LIKE 3-like OS=Cucurbita moschata OX=3662 GN=LOC111464289 PE=3 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 4.5e-99
Identity = 180/181 (99.45%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MDGGGAVHNRSVEDVFSDFRGRRSGVIKALTVDVEEFYQQCDPEKENLCLYGFPNEVWEV 60
           MDGGGAVHNRSVEDVFSDFRGRRSGVIKALTVDVEEFYQQCDPEKENLCLYGFPNEVWEV
Sbjct: 1   MDGGGAVHNRSVEDVFSDFRGRRSGVIKALTVDVEEFYQQCDPEKENLCLYGFPNEVWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQERDWLALVAVHSDSWLLSVAYYFGARFGFDKADR 120
           NLPAEEVPPELPEPALGINFARDGMQERDWLALVAVHSDSWLLSVAYYFGARFGFDKADR
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQERDWLALVAVHSDSWLLSVAYYFGARFGFDKADR 120

Query: 121 RRLFNMINDLPTVFEVVTGVAKKPVKEKSSSANGSRSKSNFKTREAEIHGMYSRQPQSRE 180
           RRLFNMINDLPTVFEVVTGVAKKPVKEKSSSANGSRSKSNFKTREAEIHGMYSRQPQ+RE
Sbjct: 121 RRLFNMINDLPTVFEVVTGVAKKPVKEKSSSANGSRSKSNFKTREAEIHGMYSRQPQARE 180

Query: 181 E 182
           E
Sbjct: 181 E 181

[Close]

BLAST of Carg13949 vs. ExPASy TrEMBL
Match: A0A0A0K9L1 (PHD-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G450620 PE=3 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 4.8e-93
Identity = 168/181 (92.82%), Postives = 178/181 (98.34%), Query Frame = 0


Query: 1   MDGGGAVHNRSVEDVFSDFRGRRSGVIKALTVDVEEFYQQCDPEKENLCLYGFPNEVWEV 60
           MDGGGAVHNRSVEDVFSDFRGRR+GVIKALTVDVEEFYQQCDPEKENLCLYGFPNEVWEV
Sbjct: 1   MDGGGAVHNRSVEDVFSDFRGRRNGVIKALTVDVEEFYQQCDPEKENLCLYGFPNEVWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQERDWLALVAVHSDSWLLSVAYYFGARFGFDKADR 120
           NLPAEEVPPELPEPALGINFARDGMQERDWLALVAVHSDSWLLSVAYYFGARFGFDK+DR
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQERDWLALVAVHSDSWLLSVAYYFGARFGFDKSDR 120

Query: 121 RRLFNMINDLPTVFEVVTGVAKKPVKEKSSSANGSRSKSNFKTREAEIHGMYSRQPQSRE 180
           RRLFNMINDLPTVFEVVTG+AKK VKEKSS+ANGS+SKS+FK+REAE+ GMY+RQ Q+RE
Sbjct: 121 RRLFNMINDLPTVFEVVTGIAKKQVKEKSSTANGSKSKSSFKSREAEMQGMYARQSQARE 180

Query: 181 E 182
           E
Sbjct: 181 E 181

[Close]

BLAST of Carg13949 vs. ExPASy TrEMBL
Match: A0A5D3BXQ0 (PHD finger protein ALFIN-LIKE 3-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001120 PE=3 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 8.3e-93
Identity = 168/181 (92.82%), Postives = 177/181 (97.79%), Query Frame = 0


Query: 1   MDGGGAVHNRSVEDVFSDFRGRRSGVIKALTVDVEEFYQQCDPEKENLCLYGFPNEVWEV 60
           MDGGGAVHNRSVEDVFSDFRGRR+GVIKALTVDVEEFYQQCDPEKENLCLYGFPNEVWEV
Sbjct: 1   MDGGGAVHNRSVEDVFSDFRGRRNGVIKALTVDVEEFYQQCDPEKENLCLYGFPNEVWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQERDWLALVAVHSDSWLLSVAYYFGARFGFDKADR 120
           NLPAEEVPPELPEPALGINFARDGMQERDWLALVAVHSDSWLLSVAYYFGARFGFDK+DR
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQERDWLALVAVHSDSWLLSVAYYFGARFGFDKSDR 120

Query: 121 RRLFNMINDLPTVFEVVTGVAKKPVKEKSSSANGSRSKSNFKTREAEIHGMYSRQPQSRE 180
           RRLFNMINDLPTVFEVVTG+AKK VKEKSSSANGS+SKS+FK+REA+  GMY+RQ Q+RE
Sbjct: 121 RRLFNMINDLPTVFEVVTGIAKKQVKEKSSSANGSKSKSSFKSREADAQGMYARQSQARE 180

Query: 181 E 182
           E
Sbjct: 181 E 181

[Close]

BLAST of Carg13949 vs. ExPASy TrEMBL
Match: A0A1S3CGR0 (PHD finger protein ALFIN-LIKE 3-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500707 PE=3 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 8.3e-93
Identity = 168/181 (92.82%), Postives = 177/181 (97.79%), Query Frame = 0


Query: 1   MDGGGAVHNRSVEDVFSDFRGRRSGVIKALTVDVEEFYQQCDPEKENLCLYGFPNEVWEV 60
           MDGGGAVHNRSVEDVFSDFRGRR+GVIKALTVDVEEFYQQCDPEKENLCLYGFPNEVWEV
Sbjct: 1   MDGGGAVHNRSVEDVFSDFRGRRNGVIKALTVDVEEFYQQCDPEKENLCLYGFPNEVWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQERDWLALVAVHSDSWLLSVAYYFGARFGFDKADR 120
           NLPAEEVPPELPEPALGINFARDGMQERDWLALVAVHSDSWLLSVAYYFGARFGFDK+DR
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQERDWLALVAVHSDSWLLSVAYYFGARFGFDKSDR 120

Query: 121 RRLFNMINDLPTVFEVVTGVAKKPVKEKSSSANGSRSKSNFKTREAEIHGMYSRQPQSRE 180
           RRLFNMINDLPTVFEVVTG+AKK VKEKSSSANGS+SKS+FK+REA+  GMY+RQ Q+RE
Sbjct: 121 RRLFNMINDLPTVFEVVTGIAKKQVKEKSSSANGSKSKSSFKSREADAQGMYARQSQARE 180

Query: 181 E 182
           E
Sbjct: 181 E 181

[Close]

BLAST of Carg13949 vs. TAIR 10
Match: AT5G20510.1 (alfin-like 5 )

HSP 1 Score: 268.1 bits (684), Expect = 6.1e-72
Identity = 131/187 (70.05%), Postives = 162/187 (86.63%), Query Frame = 0


Query: 1   MDGGGAVHN-RSVEDVFSDFRGRRSGVIKALTVDVEEFYQQCDPEKENLCLYGFPNEVWE 60
           M+GG A ++ R+VE+VF DF+GRR+G+I+ALT DVE+F+QQCDPEK+NLCLYGFPNEVWE
Sbjct: 1   MEGGTAHYSPRTVEEVFRDFKGRRAGIIQALTTDVEDFFQQCDPEKQNLCLYGFPNEVWE 60

Query: 61  VNLPAEEVPPELPEPALGINFARDGMQERDWLALVAVHSDSWLLSVAYYFGARFGFDKAD 120
           VNLPAEEVPPELPEPALGINFARDGMQER+WL+LVAVHSD+WLLSV++YFG+RFGFD+AD
Sbjct: 61  VNLPAEEVPPELPEPALGINFARDGMQERNWLSLVAVHSDAWLLSVSFYFGSRFGFDRAD 120

Query: 121 RRRLFNMINDLPTVFEVVTGVAKKPVKEKSSSA--NGSRSKSNFKTREAEIHGMYSRQPQ 180
           R+RLF+MIN++PTV+EVVTG A+K  KE  SSA  NG+RSKSN K R  E     S+   
Sbjct: 121 RKRLFSMINEVPTVYEVVTGNAEKQTKEMPSSANQNGNRSKSNSKMRGLE--SKSSKTIH 180

Query: 181 SREERQG 185
           +++E +G
Sbjct: 181 AKDEEEG 185

[Close]

BLAST of Carg13949 vs. TAIR 10
Match: AT3G42790.1 (alfin-like 3 )

HSP 1 Score: 266.9 bits (681), Expect = 1.4e-71
Identity = 121/182 (66.48%), Postives = 155/182 (85.16%), Query Frame = 0


Query: 1   MDGGGAVHN-RSVEDVFSDFRGRRSGVIKALTVDVEEFYQQCDPEKENLCLYGFPNEVWE 60
           M+GG A++N R+VE+VF DF+GRR+ ++KALT DV+EFYQQCDPEKENLCLYG PNE WE
Sbjct: 1   MEGGAALYNPRTVEEVFKDFKGRRTAIVKALTTDVQEFYQQCDPEKENLCLYGLPNEEWE 60

Query: 61  VNLPAEEVPPELPEPALGINFARDGMQERDWLALVAVHSDSWLLSVAYYFGARFGFDKAD 120
           VNLPAEEVPPELPEPALGINFARDG+ E++WL+LVA+HSD+WLLSV++YFG+RF F K +
Sbjct: 61  VNLPAEEVPPELPEPALGINFARDGLSEKEWLSLVAIHSDAWLLSVSFYFGSRFSFHKEE 120

Query: 121 RRRLFNMINDLPTVFEVVTGVAKKPVKEKSSSANGSRSKSNFKTREAEIHGMYSRQPQSR 180
           R+RLFNMIND+PT+FEVVTG+AK   K  +++ NG++SKSN K R +E     ++QP+  
Sbjct: 121 RKRLFNMINDVPTIFEVVTGMAKAKDKSSAANQNGNKSKSNSKVRTSEGKSSKTKQPKEE 180

Query: 181 EE 182
           +E
Sbjct: 181 DE 182

[Close]

BLAST of Carg13949 vs. TAIR 10
Match: AT5G26210.1 (alfin-like 4 )

HSP 1 Score: 264.2 bits (674), Expect = 8.8e-71
Identity = 129/186 (69.35%), Postives = 157/186 (84.41%), Query Frame = 0


Query: 1   MDGGGAVHNRSVEDVFSDFRGRRSGVIKALTVDVEEFYQQCDPEKENLCLYGFPNEVWEV 60
           M+ GGA + R+VE+VF DF+GRR+G+IKALT DV+EF++ CDPEKENLCLYG PNE WEV
Sbjct: 1   MEAGGAYNPRTVEEVFRDFKGRRAGMIKALTTDVQEFFRLCDPEKENLCLYGHPNEHWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQERDWLALVAVHSDSWLLSVAYYFGARFGFDKADR 120
           NLPAEEVPPELPEP LGINFARDGM E+DWL+LVAVHSD+WLL+VA++FGARFGFDKADR
Sbjct: 61  NLPAEEVPPELPEPVLGINFARDGMAEKDWLSLVAVHSDAWLLAVAFFFGARFGFDKADR 120

Query: 121 RRLFNMINDLPTVFEVVTGVAKKPVKEKSSSANGS--RSKSNFKTREAEIHGMYSR-QPQ 180
           +RLFNM+NDLPT+FEVV G AKK  K+KSS +N S  RSKS+ K R +E    +S+ +P+
Sbjct: 121 KRLFNMVNDLPTIFEVVAGTAKKQGKDKSSVSNNSSNRSKSSSK-RGSESRAKFSKPEPK 180

Query: 181 SREERQ 184
             EE +
Sbjct: 181 DDEEEE 185

[Close]

BLAST of Carg13949 vs. TAIR 10
Match: AT1G14510.1 (alfin-like 7 )

HSP 1 Score: 256.5 bits (654), Expect = 1.8e-68
Identity = 125/178 (70.22%), Postives = 150/178 (84.27%), Query Frame = 0


Query: 10  RSVEDVFSDFRGRRSGVIKALTVDVEEFYQQCDPEKENLCLYGFPNEVWEVNLPAEEVPP 69
           R+VE+VFSDFRGRR+G+IKAL+ DV++FY QCDPEKENLCLYG PNE WEVNLP EEVPP
Sbjct: 10  RTVEEVFSDFRGRRAGLIKALSTDVQKFYHQCDPEKENLCLYGLPNETWEVNLPVEEVPP 69

Query: 70  ELPEPALGINFARDGMQERDWLALVAVHSDSWLLSVAYYFGARFGFDKADRRRLFNMIND 129
           ELPEPALGINFARDGMQE+DW++LVAVHSDSWL+SVA+YFGARFGF K +R+RLF MIND
Sbjct: 70  ELPEPALGINFARDGMQEKDWISLVAVHSDSWLISVAFYFGARFGFGKNERKRLFQMIND 129

Query: 130 LPTVFEVVTGVAKKPVKEKSSSANGSRSKSN-FKTREAEIHGMYSRQ--PQSREERQG 185
           LPT+FEVVTG AK+  K++S++ N SRSKS+  K R +E H   S+   P  +E+  G
Sbjct: 130 LPTIFEVVTGNAKQS-KDQSANHNSSRSKSSGGKPRHSESHTKASKMSPPPRKEDESG 186

[Close]

BLAST of Carg13949 vs. TAIR 10
Match: AT2G02470.1 (alfin-like 6 )

HSP 1 Score: 247.3 bits (630), Expect = 1.1e-65
Identity = 123/179 (68.72%), Postives = 148/179 (82.68%), Query Frame = 0


Query: 10  RSVEDVFSDFRGRRSGVIKALTVDVEEFYQQCDPEKENLCLYGFPNEVWEVNLPAEEVPP 69
           R+VE+VFSDFRGRR+G+IKALT D+ +FYQ CDPEKENLCLYG PNE WEVNLP EEVPP
Sbjct: 10  RTVEEVFSDFRGRRAGLIKALTNDMVKFYQTCDPEKENLCLYGLPNETWEVNLPVEEVPP 69

Query: 70  ELPEPALGINFARDGMQERDWLALVAVHSDSWLLSVAYYFGARFGFDKADRRRLFNMIND 129
           ELPEPALGINFARDGMQE+DW++LVAVHSDSWLLSVA+YFGARFGF K +R+RLF MIN+
Sbjct: 70  ELPEPALGINFARDGMQEKDWVSLVAVHSDSWLLSVAFYFGARFGFGKNERKRLFQMINE 129

Query: 130 LPTVFEVVTGVAKKPVKEKSSSANGSRSK-SNFKTREAE----IHGMYSRQPQSREERQ 184
           LPT+FEVV+G AK+  K+ S + N S+SK S  K+R++E    +  M S  P+  EE +
Sbjct: 130 LPTIFEVVSGNAKQS-KDLSVNNNNSKSKPSGVKSRQSESLSKVAKMSSPPPKEEEEEE 187

The following BLAST results are available for this feature:

BLAST of Carg13949 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7025880.1	1.4e-118	100.00	PHD finger protein ALFIN-LIKE 5 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023000582.1	9.3e-99	99.45	PHD finger protein ALFIN-LIKE 3-like [Cucurbita maxima]	[more]
KAG6593538.1	9.3e-99	99.45	PHD finger protein ALFIN-LIKE 5, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022964198.1	9.3e-99	99.45	PHD finger protein ALFIN-LIKE 3-like [Cucurbita moschata]	[more]
XP_023514184.1	2.7e-98	98.90	PHD finger protein ALFIN-LIKE 3-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg13949 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5XEM9	8.6e-71	70.05	PHD finger protein ALFIN-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=AL5 PE=2 SV=1	[more]
Q9M2B4	1.9e-70	66.48	PHD finger protein ALFIN-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=AL3 PE=1 SV=1	[more]
O81488	1.2e-69	69.35	PHD finger protein ALFIN-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=AL4 PE=1 SV=2	[more]
B8BJV8	1.6e-69	69.78	PHD finger protein ALFIN-LIKE 8 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_35...	[more]
Q2R837	1.6e-69	69.78	PHD finger protein ALFIN-LIKE 8 OS=Oryza sativa subsp. japonica OX=39947 GN=Os11...	[more]

BLAST of Carg13949 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KE15	4.5e-99	99.45	PHD finger protein ALFIN-LIKE 3-like OS=Cucurbita maxima OX=3661 GN=LOC111494824...	[more]
A0A6J1HK44	4.5e-99	99.45	PHD finger protein ALFIN-LIKE 3-like OS=Cucurbita moschata OX=3662 GN=LOC1114642...	[more]
A0A0A0K9L1	4.8e-93	92.82	PHD-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G450620 PE...	[more]
A0A5D3BXQ0	8.3e-93	92.82	PHD finger protein ALFIN-LIKE 3-like isoform X2 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3CGR0	8.3e-93	92.82	PHD finger protein ALFIN-LIKE 3-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Carg13949 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20510.1	6.1e-72	70.05	alfin-like 5	[more]
AT3G42790.1	1.4e-71	66.48	alfin-like 3	[more]
AT5G26210.1	8.8e-71	69.35	alfin-like 4	[more]
AT1G14510.1	1.8e-68	70.22	alfin-like 7	[more]
AT2G02470.1	1.1e-65	68.72	alfin-like 6	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021998	Alfin, N-terminal	PFAM	PF12165	Alfin	coord: 11..139 e-value: 4.4E-68 score: 226.9
None	No IPR available	PANTHER	PTHR12321:SF133	ALFIN-LIKE TRANSCRIPTION FACTOR	coord: 8..182
IPR045104	Alfin	PANTHER	PTHR12321	CPG BINDING PROTEIN	coord: 8..182

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg13949-RA	Carg13949-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006325	chromatin organization
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0042393	histone binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0000976	transcription cis-regulatory region binding
molecular_function	GO:0003712	transcription coregulator activity