Carg13896 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg13896
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	AAA domain-containing protein
Location	Carg_Chr08: 4624323 .. 4627295 (+)
RNA-Seq Expression	Carg13896
Synteny	Carg13896

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGCAATTCTCGCAACCGCACGTTCAACTTTCATTTCGTTCAGTTCTCTCGATAGTTTCCTCATTCGGATCAGAGTAATCAGGTTTCTTTCGGATTTACTCAGGGATTAGGGTTTATGTGAGAGAGGGAATTCGTGTGCGAACCAAGCATTTTCTCCATTGGAATTTTGTGACGATGAGAGCCAGATTGGTGGTGTTTCCAATCAGAGGAAGAAATTGGTGTTTCAGCAGATCCGTCGACCCTGCCGCCTCGGATTCTGCTTCTACTCAGACTCCTTCCACTTTGAAAGATCTCTGGACCAAAATATCCTCGCCTTCTTCCTCCAAATCCGACGCTCTCTCCAGCAGTACCAGTAGTAGCAATGCGGAAATCGTTACCGATTTTATCTCTTTCAAGGTCCTTCATGCTCTTTTCAGTTTCGTCTTGTTTTGTTTTTTTTTTCTTCTGGTATTTGTTTTGATCCTGTCGAACATGGCGTTGACAATGACGTTCCGTTTATCAGATGAATAAAGCTTGGACTGCTCTGGAGAAGGCTCCTGATGGCTCGTTTAAGAATAAACTTCACGGGTGAAGTCTCGCCAATGCGATTTTATTCGTTTATGGCACATTTCTAGTGAAATTAACTAATATGCTCTTGATTTTCTTCCTGTAGGATCGGATTGAAGCTCTTATCTCGAGTTAAGCCGTCTGAGATATTCTTGAAGTCAATAACTAAAGATGTTACGAGCGTTGAAATAGCATATCCATCCAGGTTTCATCTCTTTCGCTTTGTTATTTTTAAAATCGTCGATATAACAATTTCGCGCTTCCGCCTGCTTCTTCTTCTTTGGCTACTTGAATCCAAACCTAGTAGGGTTTTTTTTTCCCCTTACCATATTACAATTTGTTATGCTATTTCACTGATTTCTTGCGACATTACAGTTTGAATCCACGGCTCGTTCGTAGGAGGTTAAGGCATATTGCCCTCAGGTGCATTTTCCCTTTTCCATCTGGCGAATTGAAGCTAACTAGCGATTCTCTCATTTTATTCTTTTTTCTTTGAAGCAATGTTCAACATTACACTTAGAATCCATGATTATTGTTCTTTCAAGTCGTGAATCACAGTCCTAATAGGACCTTATCAGCTCAGCGTCCAATACTACTACTCTGTGGTTCCATGATAGAAAGCTTATATCATCTCAAGTCCTTTTTGTTTCCAGGAAGCTTTTCTTGTTGCAAAAGTTTGAACTATGCCCCTTATTGATGTGAACTTTCTGTATCTCATGACCAGGGGAACTGCCATCCACAAGAAGCACTTCTATGGTTCAGTTTCGTTGCTTCCATTAGCAAGTGCATTTACTGTATGTTTGTGTCTATTTTTGAATATCAGCCATACTTTTTTCTTGCATTGTTTGTACCATGTTGATGTTATGCTTTTGACACAACATGTACTGCAACATTTCAAGTTCCTTTTTACTTAATAAGTACATTTATATGTCTTCTCTTGACTTCTATCCTGGTTTGTCTTACGTAGATTTTGCCTCTGCCAAATATTCCATTCTTTTGGGTTTTGTTTCGCACATATTCTCATTGGCGAGCCCTAAAGGTACTTCTATACTGGATTTTGTCAGTGGCTTTTGGACATCGTTTTTTTAGTAGTTGTTACTTGACCCTGGGGTTTTATAATTAGTTGTATAAGAGTTTTACATGTATCTAATGTTTCTGCACCTTTTTTTTCCTTCTTCTAAATGTATGCAAATATACACGCTTTTAGGGAAGTGAAATACTTCTTCAGTTGGTCTCTGATAGATCTTATTCGTGCAACTCATCCACTGATGGTAACATAACTGTGAACACAGTCCAACGACATCCAGGTTCAACCTTGGTAAGTATGAAGTATTTTTATGTTTTCAGGTACTAGTAGATCTACACCTATATTCTTGATTGGAATTGGAAAAAGATATTTTTGGTAACCCGATAATTTTCCATATAACATATCTTTTTACCGATCAGTGGTGTGCCTGTTGCATAGATAGGGCTTCGGTAATGAAATGGTAATTCATTTTGCATCTTGGTCATCCCGAGCTGTAACTTTATGAAGGAAAAGATTGACTATTACTCTGAGTGGAGTTAGATACTCTTTCCCTCATTTGCGTGTCACCCCATGTTTAAATATTGGTCGATGTCTATTTTTCTTTTCAGTTCAATCCTTGTATTTCTGCTTTTAATAGACTATGCATAGCATAAAACTGCGGTCGCTCTTACTTGGATTATGTTAATGGTGTCTAGGATCTGCAGCCATCAAAGGAACTCGACAAATTTCTGAGCCAGATGGAGGGATCTGATGATATAACTACTACAATTAAAGATATCTGCAAGATCTTTGATTTAAACATGAATAATGTTTTGAAGTACAAGGATAAAATGTGATGAGCGAGACCCCATCCATTTTCAGATGGGGGAAAAGAAGGTGCAACATTAAAACAAAGGAGATGGTCTTTGATTGATATTCATGGGATGAGAGATTGATTTATGGAAGAAAATCACGAAAGATGAAATAAGCTTGAGCCAACATATGCTTGGACTAGTGGTGGTATGTTATGCGTCTTAGAATTTACATTGTTCTTCCATTATAAAAGGAGGGGAGGGAGGAAGTGCACAGCCTGATTCCCAGTTTGGTGGCCTTTAATGTGTTGGGGCTAGTGTCATCTTATCCATCCCCAAGAACAAAGAATCGGATCCGTCTTAGTAAGAAATTCGAACAAACAAACGAACGAACGAACAACACAAGTTCGTGTTCTCTTCTTTATGCAAATCAAATGTGGTTGGCACCAGATCCCACACTGGTTAGTAGCTTTTTTCTTTTTTGGTTAATCTTAGCTCTCATCTTTGCGCCATATCTTATTATTGTTCATCTGTTTTGAAATGTTAAACAGACTATTTTGATCTAACATTTATATTTTAGGGAAAACAAATGTTGAGGTTACTATGAA

mRNA sequence

TTTGCAATTCTCGCAACCGCACGTTCAACTTTCATTTCGTTCAGTTCTCTCGATAGTTTCCTCATTCGGATCAGAGTAATCAGGTTTCTTTCGGATTTACTCAGGGATTAGGGTTTATGTGAGAGAGGGAATTCGTGTGCGAACCAAGCATTTTCTCCATTGGAATTTTGTGACGATGAGAGCCAGATTGGTGGTGTTTCCAATCAGAGGAAGAAATTGGTGTTTCAGCAGATCCGTCGACCCTGCCGCCTCGGATTCTGCTTCTACTCAGACTCCTTCCACTTTGAAAGATCTCTGGACCAAAATATCCTCGCCTTCTTCCTCCAAATCCGACGCTCTCTCCAGCAGTACCAGTAGTAGCAATGCGGAAATCGTTACCGATTTTATCTCTTTCAAGATGAATAAAGCTTGGACTGCTCTGGAGAAGGCTCCTGATGGCTCGTTTAAGAATAAACTTCACGGGATCGGATTGAAGCTCTTATCTCGAGTTAAGCCGTCTGAGATATTCTTGAAGTCAATAACTAAAGATGTTACGAGCGTTGAAATAGCATATCCATCCAGTTTGAATCCACGGCTCGTTCGTAGGAGGTTAAGGCATATTGCCCTCAGGGGAACTGCCATCCACAAGAAGCACTTCTATGGTTCAGTTTCGTTGCTTCCATTAGCAAGTGCATTTACTATTTTGCCTCTGCCAAATATTCCATTCTTTTGGGTTTTGTTTCGCACATATTCTCATTGGCGAGCCCTAAAGGGAAGTGAAATACTTCTTCAGTTGGTCTCTGATAGATCTTATTCGTGCAACTCATCCACTGATGGTAACATAACTGTGAACACAGTCCAACGACATCCAGGTTCAACCTTGGATCTGCAGCCATCAAAGGAACTCGACAAATTTCTGAGCCAGATGGAGGGATCTGATGATATAACTACTACAATTAAAGATATCTGCAAGATCTTTGATTTAAACATGAATAATGTTTTGAAGTACAAGGATAAAATGTGATGAGCGAGACCCCATCCATTTTCAGATGGGGGAAAAGAAGGTGCAACATTAAAACAAAGGAGATGGTCTTTGATTGATATTCATGGGATGAGAGATTGATTTATGGAAGAAAATCACGAAAGATGAAATAAGCTTGAGCCAACATATGCTTGGACTAGTGGTGGTATGTTATGCGTCTTAGAATTTACATTGTTCTTCCATTATAAAAGGAGGGGAGGGAGGAAGTGCACAGCCTGATTCCCAGTTTGGTGGCCTTTAATGTGTTGGGGCTAGTGTCATCTTATCCATCCCCAAGAACAAAGAATCGGATCCGTCTTAGTAAGAAATTCGAACAAACAAACGAACGAACGAACAACACAAGTTCGTGTTCTCTTCTTTATGCAAATCAAATGTGGTTGGCACCAGATCCCACACTGGTTAGTAGCTTTTTTCTTTTTTGGTTAATCTTAGCTCTCATCTTTGCGCCATATCTTATTATTGTTCATCTGTTTTGAAATGTTAAACAGACTATTTTGATCTAACATTTATATTTTAGGGAAAACAAATGTTGAGGTTACTATGAA

Coding sequence (CDS)

ATGAGAGCCAGATTGGTGGTGTTTCCAATCAGAGGAAGAAATTGGTGTTTCAGCAGATCCGTCGACCCTGCCGCCTCGGATTCTGCTTCTACTCAGACTCCTTCCACTTTGAAAGATCTCTGGACCAAAATATCCTCGCCTTCTTCCTCCAAATCCGACGCTCTCTCCAGCAGTACCAGTAGTAGCAATGCGGAAATCGTTACCGATTTTATCTCTTTCAAGATGAATAAAGCTTGGACTGCTCTGGAGAAGGCTCCTGATGGCTCGTTTAAGAATAAACTTCACGGGATCGGATTGAAGCTCTTATCTCGAGTTAAGCCGTCTGAGATATTCTTGAAGTCAATAACTAAAGATGTTACGAGCGTTGAAATAGCATATCCATCCAGTTTGAATCCACGGCTCGTTCGTAGGAGGTTAAGGCATATTGCCCTCAGGGGAACTGCCATCCACAAGAAGCACTTCTATGGTTCAGTTTCGTTGCTTCCATTAGCAAGTGCATTTACTATTTTGCCTCTGCCAAATATTCCATTCTTTTGGGTTTTGTTTCGCACATATTCTCATTGGCGAGCCCTAAAGGGAAGTGAAATACTTCTTCAGTTGGTCTCTGATAGATCTTATTCGTGCAACTCATCCACTGATGGTAACATAACTGTGAACACAGTCCAACGACATCCAGGTTCAACCTTGGATCTGCAGCCATCAAAGGAACTCGACAAATTTCTGAGCCAGATGGAGGGATCTGATGATATAACTACTACAATTAAAGATATCTGCAAGATCTTTGATTTAAACATGAATAATGTTTTGAAGTACAAGGATAAAATGTGA

Protein sequence

MRARLVVFPIRGRNWCFSRSVDPAASDSASTQTPSTLKDLWTKISSPSSSKSDALSSSTSSSNAEIVTDFISFKMNKAWTALEKAPDGSFKNKLHGIGLKLLSRVKPSEIFLKSITKDVTSVEIAYPSSLNPRLVRRRLRHIALRGTAIHKKHFYGSVSLLPLASAFTILPLPNIPFFWVLFRTYSHWRALKGSEILLQLVSDRSYSCNSSTDGNITVNTVQRHPGSTLDLQPSKELDKFLSQMEGSDDITTTIKDICKIFDLNMNNVLKYKDKM

Homology

[Close]

BLAST of Carg13896 vs. NCBI nr
Match: KAG7025932.1 (hypothetical protein SDJN02_12430 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 535.4 bits (1378), Expect = 2.9e-148
Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0


Query: 1   MRARLVVFPIRGRNWCFSRSVDPAASDSASTQTPSTLKDLWTKISSPSSSKSDALSSSTS 60
           MRARLVVFPIRGRNWCFSRSVDPAASDSASTQTPSTLKDLWTKISSPSSSKSDALSSSTS
Sbjct: 1   MRARLVVFPIRGRNWCFSRSVDPAASDSASTQTPSTLKDLWTKISSPSSSKSDALSSSTS 60

Query: 61  SSNAEIVTDFISFKMNKAWTALEKAPDGSFKNKLHGIGLKLLSRVKPSEIFLKSITKDVT 120
           SSNAEIVTDFISFKMNKAWTALEKAPDGSFKNKLHGIGLKLLSRVKPSEIFLKSITKDVT
Sbjct: 61  SSNAEIVTDFISFKMNKAWTALEKAPDGSFKNKLHGIGLKLLSRVKPSEIFLKSITKDVT 120

Query: 121 SVEIAYPSSLNPRLVRRRLRHIALRGTAIHKKHFYGSVSLLPLASAFTILPLPNIPFFWV 180
           SVEIAYPSSLNPRLVRRRLRHIALRGTAIHKKHFYGSVSLLPLASAFTILPLPNIPFFWV
Sbjct: 121 SVEIAYPSSLNPRLVRRRLRHIALRGTAIHKKHFYGSVSLLPLASAFTILPLPNIPFFWV 180

Query: 181 LFRTYSHWRALKGSEILLQLVSDRSYSCNSSTDGNITVNTVQRHPGSTLDLQPSKELDKF 240
           LFRTYSHWRALKGSEILLQLVSDRSYSCNSSTDGNITVNTVQRHPGSTLDLQPSKELDKF
Sbjct: 181 LFRTYSHWRALKGSEILLQLVSDRSYSCNSSTDGNITVNTVQRHPGSTLDLQPSKELDKF 240

Query: 241 LSQMEGSDDITTTIKDICKIFDLNMNNVLKYKDKM 276
           LSQMEGSDDITTTIKDICKIFDLNMNNVLKYKDKM
Sbjct: 241 LSQMEGSDDITTTIKDICKIFDLNMNNVLKYKDKM 275

[Close]

BLAST of Carg13896 vs. NCBI nr
Match: KAG6593588.1 (hypothetical protein SDJN03_13064, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 532.7 bits (1371), Expect = 1.9e-147
Identity = 274/275 (99.64%), Postives = 274/275 (99.64%), Query Frame = 0


Query: 1   MRARLVVFPIRGRNWCFSRSVDPAASDSASTQTPSTLKDLWTKISSPSSSKSDALSSSTS 60
           MRARLVVFPIRGRNWCFSRSVDPAASDSASTQTPSTLKDLWTKISSPSSSKSDALSSSTS
Sbjct: 1   MRARLVVFPIRGRNWCFSRSVDPAASDSASTQTPSTLKDLWTKISSPSSSKSDALSSSTS 60

Query: 61  SSNAEIVTDFISFKMNKAWTALEKAPDGSFKNKLHGIGLKLLSRVKPSEIFLKSITKDVT 120
           SSNAEIVTDFISFKMNKAWTALEKAPDGSFKNKLHGIGLKLLSRVKPSEIFLKSITKDVT
Sbjct: 61  SSNAEIVTDFISFKMNKAWTALEKAPDGSFKNKLHGIGLKLLSRVKPSEIFLKSITKDVT 120

Query: 121 SVEIAYPSSLNPRLVRRRLRHIALRGTAIHKKHFYGSVSLLPLASAFTILPLPNIPFFWV 180
           SVEIAYPSSLNPRLVRRRLRHIALRGTAIHKKHFYGSVSLLPLASAFTILPLPNIPFFWV
Sbjct: 121 SVEIAYPSSLNPRLVRRRLRHIALRGTAIHKKHFYGSVSLLPLASAFTILPLPNIPFFWV 180

Query: 181 LFRTYSHWRALKGSEILLQLVSDRSYSCNSSTDGNITVNTVQRHPGSTLDLQPSKELDKF 240
           LFRTYSHWRALKGSEILLQLVSDRSYSCNSSTDGN TVNTVQRHPGSTLDLQPSKELDKF
Sbjct: 181 LFRTYSHWRALKGSEILLQLVSDRSYSCNSSTDGNKTVNTVQRHPGSTLDLQPSKELDKF 240

Query: 241 LSQMEGSDDITTTIKDICKIFDLNMNNVLKYKDKM 276
           LSQMEGSDDITTTIKDICKIFDLNMNNVLKYKDKM
Sbjct: 241 LSQMEGSDDITTTIKDICKIFDLNMNNVLKYKDKM 275

[Close]

BLAST of Carg13896 vs. NCBI nr
Match: XP_022964630.1 (uncharacterized protein LOC111464584 [Cucurbita moschata])

HSP 1 Score: 531.2 bits (1367), Expect = 5.4e-147
Identity = 273/275 (99.27%), Postives = 274/275 (99.64%), Query Frame = 0


Query: 1   MRARLVVFPIRGRNWCFSRSVDPAASDSASTQTPSTLKDLWTKISSPSSSKSDALSSSTS 60
           MRARLVVFPIRGRNWCFSRSVDPAASDSASTQTPSTLKDLWTKISSPSSSKSDALSSSTS
Sbjct: 1   MRARLVVFPIRGRNWCFSRSVDPAASDSASTQTPSTLKDLWTKISSPSSSKSDALSSSTS 60

Query: 61  SSNAEIVTDFISFKMNKAWTALEKAPDGSFKNKLHGIGLKLLSRVKPSEIFLKSITKDVT 120
           SSNAEIVTDFISFKMNKAWTALEKAPDGSFKNKLHGIGLKLLSRVKPSEIFLKSITKDVT
Sbjct: 61  SSNAEIVTDFISFKMNKAWTALEKAPDGSFKNKLHGIGLKLLSRVKPSEIFLKSITKDVT 120

Query: 121 SVEIAYPSSLNPRLVRRRLRHIALRGTAIHKKHFYGSVSLLPLASAFTILPLPNIPFFWV 180
           SVEIAYPSSLNPRLVRRRLRHIALRGTAIHKKHFYGSVSLLPLASAFTILPLPNIPFFWV
Sbjct: 121 SVEIAYPSSLNPRLVRRRLRHIALRGTAIHKKHFYGSVSLLPLASAFTILPLPNIPFFWV 180

Query: 181 LFRTYSHWRALKGSEILLQLVSDRSYSCNSSTDGNITVNTVQRHPGSTLDLQPSKELDKF 240
           LFRTYSHWRALKGSEILLQLVSDRSYSCNSSTDGN TVNTVQ+HPGSTLDLQPSKELDKF
Sbjct: 181 LFRTYSHWRALKGSEILLQLVSDRSYSCNSSTDGNKTVNTVQQHPGSTLDLQPSKELDKF 240

Query: 241 LSQMEGSDDITTTIKDICKIFDLNMNNVLKYKDKM 276
           LSQMEGSDDITTTIKDICKIFDLNMNNVLKYKDKM
Sbjct: 241 LSQMEGSDDITTTIKDICKIFDLNMNNVLKYKDKM 275

[Close]

BLAST of Carg13896 vs. NCBI nr
Match: XP_023000133.1 (uncharacterized protein LOC111494421 [Cucurbita maxima] >XP_023513567.1 uncharacterized protein LOC111778134 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 528.5 bits (1360), Expect = 3.5e-146
Identity = 272/275 (98.91%), Postives = 273/275 (99.27%), Query Frame = 0


Query: 1   MRARLVVFPIRGRNWCFSRSVDPAASDSASTQTPSTLKDLWTKISSPSSSKSDALSSSTS 60
           MRARLVVFPIRGRNWCFSRSVDPAASDSASTQTPSTLKDLWTKISSPSSSKSDALSSSTS
Sbjct: 1   MRARLVVFPIRGRNWCFSRSVDPAASDSASTQTPSTLKDLWTKISSPSSSKSDALSSSTS 60

Query: 61  SSNAEIVTDFISFKMNKAWTALEKAPDGSFKNKLHGIGLKLLSRVKPSEIFLKSITKDVT 120
           SSNAEIVTDFISFKMNKAWTALEKAPDGSFKNKLHGIGLKLLSRVKPSEIFLKSITKDVT
Sbjct: 61  SSNAEIVTDFISFKMNKAWTALEKAPDGSFKNKLHGIGLKLLSRVKPSEIFLKSITKDVT 120

Query: 121 SVEIAYPSSLNPRLVRRRLRHIALRGTAIHKKHFYGSVSLLPLASAFTILPLPNIPFFWV 180
           SVEIAYPSSLNPRLVRRRLRHIALRGTAIHKKHFYGSVSLLPLASAFTILPLPNIPFFWV
Sbjct: 121 SVEIAYPSSLNPRLVRRRLRHIALRGTAIHKKHFYGSVSLLPLASAFTILPLPNIPFFWV 180

Query: 181 LFRTYSHWRALKGSEILLQLVSDRSYSCNSSTDGNITVNTVQRHPGSTLDLQPSKELDKF 240
           LFRTYSHWRALKGSEILLQLVSDRSYSCNSSTDGN TVNTVQ+HPGSTLDLQPSKELDKF
Sbjct: 181 LFRTYSHWRALKGSEILLQLVSDRSYSCNSSTDGNKTVNTVQQHPGSTLDLQPSKELDKF 240

Query: 241 LSQMEGSDDITTTIKDICKIFDLNMNNVLKYKDKM 276
           LSQMEGS DITTTIKDICKIFDLNMNNVLKYKDKM
Sbjct: 241 LSQMEGSGDITTTIKDICKIFDLNMNNVLKYKDKM 275

[Close]

BLAST of Carg13896 vs. NCBI nr
Match: XP_022147084.1 (uncharacterized protein LOC111016104 isoform X1 [Momordica charantia])

HSP 1 Score: 473.4 bits (1217), Expect = 1.3e-129
Identity = 243/275 (88.36%), Postives = 256/275 (93.09%), Query Frame = 0


Query: 1   MRARLVVFPIRGRNWCFSRSVDPAASDSASTQTPSTLKDLWTKISSPSSSKSDALSSSTS 60
           MRARLVVFPIRGRNWCF RS+DPAASDSAS+QTPSTLKDLW +ISS SSSKSDA SS+TS
Sbjct: 1   MRARLVVFPIRGRNWCFGRSIDPAASDSASSQTPSTLKDLWIRISSSSSSKSDAHSSTTS 60

Query: 61  SSNAEIVTDFISFKMNKAWTALEKAPDGSFKNKLHGIGLKLLSRVKPSEIFLKSITKDVT 120
           SSNAEIVTDFISFKMNKAWTALE AP+GSFKNKLHGIGLKLLSRVKP EIFLKSITKDVT
Sbjct: 61  SSNAEIVTDFISFKMNKAWTALENAPNGSFKNKLHGIGLKLLSRVKPDEIFLKSITKDVT 120

Query: 121 SVEIAYPSSLNPRLVRRRLRHIALRGTAIHKKHFYGSVSLLPLASAFTILPLPNIPFFWV 180
           +VEI YPSSLNPRLVRRRLRHIALRGTAIHKK+FYGSVSLLP+ SAFT+LPLPNIPFFWV
Sbjct: 121 NVEITYPSSLNPRLVRRRLRHIALRGTAIHKKYFYGSVSLLPVTSAFTVLPLPNIPFFWV 180

Query: 181 LFRTYSHWRALKGSEILLQLVSDRSYSCNSSTDGNITVNTVQRHPGSTLDLQPSKELDKF 240
           LFRTYSHWRALKGSE LLQLVSDRSYS NSSTDGN TV+ V++HPGSTLDLQPSKELDK 
Sbjct: 181 LFRTYSHWRALKGSEKLLQLVSDRSYSFNSSTDGNKTVHKVRQHPGSTLDLQPSKELDKI 240

Query: 241 LSQMEGSDDITTTIKDICKIFDLNMNNVLKYKDKM 276
           LSQMEG    TT IKDICKIFDLN NNVLKYKD+M
Sbjct: 241 LSQMEGRGGDTTAIKDICKIFDLNANNVLKYKDRM 275

[Close]

BLAST of Carg13896 vs. ExPASy Swiss-Prot
Match: O13942 (Uncharacterized protein C23H3.12c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC23H3.12c PE=4 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 6.2e-05
Identity = 50/180 (27.78%), Postives = 85/180 (47.22%), Query Frame = 0


Query: 67  VTDFISFKMNKAWTALEKAPDGSFKNKLHGIGLKLLSRVKPSEIFLKSI--TKDVTSVE- 126
           + D I  ++ K W +   A     K K+  +G ++L      E FL++I   K +   E 
Sbjct: 29  IHDKIINRIYKYWDSW-SASKSYTKQKVVSLGNRILHATPYEENFLRAIAPVKKLNDTEL 88

Query: 127 -----IAYPSSLNPRLVRRRL-RHIALRGTAIHKKHFYGSVSLLPLASAFTILPL-PNIP 186
                I +P +L    +   L R   L+ T  H  +  G++  LPL   F ++PL PNIP
Sbjct: 89  HQTLYIEHPPNLESSTILAELNRSKQLQKT--HTNYLIGNIIGLPLTIPFILIPLIPNIP 148

Query: 187 FFWVLFRTYSHWRALKGSEILLQLVSDRSYSCNSS----------TDGNIT-VNTVQRHP 226
            F++ +R Y ++RA++GS  L +++S  +     S          T+G+ T +N +  HP
Sbjct: 149 GFYLCYRAYCNFRAIQGSIQLARVMSIENIQMQESEKLEKALKLFTNGDATPLNALIGHP 205

[Close]

BLAST of Carg13896 vs. ExPASy TrEMBL
Match: A0A6J1HLD1 (uncharacterized protein LOC111464584 OS=Cucurbita moschata OX=3662 GN=LOC111464584 PE=4 SV=1)

HSP 1 Score: 531.2 bits (1367), Expect = 2.6e-147
Identity = 273/275 (99.27%), Postives = 274/275 (99.64%), Query Frame = 0


Query: 1   MRARLVVFPIRGRNWCFSRSVDPAASDSASTQTPSTLKDLWTKISSPSSSKSDALSSSTS 60
           MRARLVVFPIRGRNWCFSRSVDPAASDSASTQTPSTLKDLWTKISSPSSSKSDALSSSTS
Sbjct: 1   MRARLVVFPIRGRNWCFSRSVDPAASDSASTQTPSTLKDLWTKISSPSSSKSDALSSSTS 60

Query: 61  SSNAEIVTDFISFKMNKAWTALEKAPDGSFKNKLHGIGLKLLSRVKPSEIFLKSITKDVT 120
           SSNAEIVTDFISFKMNKAWTALEKAPDGSFKNKLHGIGLKLLSRVKPSEIFLKSITKDVT
Sbjct: 61  SSNAEIVTDFISFKMNKAWTALEKAPDGSFKNKLHGIGLKLLSRVKPSEIFLKSITKDVT 120

Query: 121 SVEIAYPSSLNPRLVRRRLRHIALRGTAIHKKHFYGSVSLLPLASAFTILPLPNIPFFWV 180
           SVEIAYPSSLNPRLVRRRLRHIALRGTAIHKKHFYGSVSLLPLASAFTILPLPNIPFFWV
Sbjct: 121 SVEIAYPSSLNPRLVRRRLRHIALRGTAIHKKHFYGSVSLLPLASAFTILPLPNIPFFWV 180

Query: 181 LFRTYSHWRALKGSEILLQLVSDRSYSCNSSTDGNITVNTVQRHPGSTLDLQPSKELDKF 240
           LFRTYSHWRALKGSEILLQLVSDRSYSCNSSTDGN TVNTVQ+HPGSTLDLQPSKELDKF
Sbjct: 181 LFRTYSHWRALKGSEILLQLVSDRSYSCNSSTDGNKTVNTVQQHPGSTLDLQPSKELDKF 240

Query: 241 LSQMEGSDDITTTIKDICKIFDLNMNNVLKYKDKM 276
           LSQMEGSDDITTTIKDICKIFDLNMNNVLKYKDKM
Sbjct: 241 LSQMEGSDDITTTIKDICKIFDLNMNNVLKYKDKM 275

[Close]

BLAST of Carg13896 vs. ExPASy TrEMBL
Match: A0A6J1KLS4 (uncharacterized protein LOC111494421 OS=Cucurbita maxima OX=3661 GN=LOC111494421 PE=4 SV=1)

HSP 1 Score: 528.5 bits (1360), Expect = 1.7e-146
Identity = 272/275 (98.91%), Postives = 273/275 (99.27%), Query Frame = 0


Query: 1   MRARLVVFPIRGRNWCFSRSVDPAASDSASTQTPSTLKDLWTKISSPSSSKSDALSSSTS 60
           MRARLVVFPIRGRNWCFSRSVDPAASDSASTQTPSTLKDLWTKISSPSSSKSDALSSSTS
Sbjct: 1   MRARLVVFPIRGRNWCFSRSVDPAASDSASTQTPSTLKDLWTKISSPSSSKSDALSSSTS 60

Query: 61  SSNAEIVTDFISFKMNKAWTALEKAPDGSFKNKLHGIGLKLLSRVKPSEIFLKSITKDVT 120
           SSNAEIVTDFISFKMNKAWTALEKAPDGSFKNKLHGIGLKLLSRVKPSEIFLKSITKDVT
Sbjct: 61  SSNAEIVTDFISFKMNKAWTALEKAPDGSFKNKLHGIGLKLLSRVKPSEIFLKSITKDVT 120

Query: 121 SVEIAYPSSLNPRLVRRRLRHIALRGTAIHKKHFYGSVSLLPLASAFTILPLPNIPFFWV 180
           SVEIAYPSSLNPRLVRRRLRHIALRGTAIHKKHFYGSVSLLPLASAFTILPLPNIPFFWV
Sbjct: 121 SVEIAYPSSLNPRLVRRRLRHIALRGTAIHKKHFYGSVSLLPLASAFTILPLPNIPFFWV 180

Query: 181 LFRTYSHWRALKGSEILLQLVSDRSYSCNSSTDGNITVNTVQRHPGSTLDLQPSKELDKF 240
           LFRTYSHWRALKGSEILLQLVSDRSYSCNSSTDGN TVNTVQ+HPGSTLDLQPSKELDKF
Sbjct: 181 LFRTYSHWRALKGSEILLQLVSDRSYSCNSSTDGNKTVNTVQQHPGSTLDLQPSKELDKF 240

Query: 241 LSQMEGSDDITTTIKDICKIFDLNMNNVLKYKDKM 276
           LSQMEGS DITTTIKDICKIFDLNMNNVLKYKDKM
Sbjct: 241 LSQMEGSGDITTTIKDICKIFDLNMNNVLKYKDKM 275

[Close]

BLAST of Carg13896 vs. ExPASy TrEMBL
Match: A0A6J1CZZ6 (uncharacterized protein LOC111016104 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111016104 PE=4 SV=1)

HSP 1 Score: 473.4 bits (1217), Expect = 6.4e-130
Identity = 243/275 (88.36%), Postives = 256/275 (93.09%), Query Frame = 0


Query: 1   MRARLVVFPIRGRNWCFSRSVDPAASDSASTQTPSTLKDLWTKISSPSSSKSDALSSSTS 60
           MRARLVVFPIRGRNWCF RS+DPAASDSAS+QTPSTLKDLW +ISS SSSKSDA SS+TS
Sbjct: 1   MRARLVVFPIRGRNWCFGRSIDPAASDSASSQTPSTLKDLWIRISSSSSSKSDAHSSTTS 60

Query: 61  SSNAEIVTDFISFKMNKAWTALEKAPDGSFKNKLHGIGLKLLSRVKPSEIFLKSITKDVT 120
           SSNAEIVTDFISFKMNKAWTALE AP+GSFKNKLHGIGLKLLSRVKP EIFLKSITKDVT
Sbjct: 61  SSNAEIVTDFISFKMNKAWTALENAPNGSFKNKLHGIGLKLLSRVKPDEIFLKSITKDVT 120

Query: 121 SVEIAYPSSLNPRLVRRRLRHIALRGTAIHKKHFYGSVSLLPLASAFTILPLPNIPFFWV 180
           +VEI YPSSLNPRLVRRRLRHIALRGTAIHKK+FYGSVSLLP+ SAFT+LPLPNIPFFWV
Sbjct: 121 NVEITYPSSLNPRLVRRRLRHIALRGTAIHKKYFYGSVSLLPVTSAFTVLPLPNIPFFWV 180

Query: 181 LFRTYSHWRALKGSEILLQLVSDRSYSCNSSTDGNITVNTVQRHPGSTLDLQPSKELDKF 240
           LFRTYSHWRALKGSE LLQLVSDRSYS NSSTDGN TV+ V++HPGSTLDLQPSKELDK 
Sbjct: 181 LFRTYSHWRALKGSEKLLQLVSDRSYSFNSSTDGNKTVHKVRQHPGSTLDLQPSKELDKI 240

Query: 241 LSQMEGSDDITTTIKDICKIFDLNMNNVLKYKDKM 276
           LSQMEG    TT IKDICKIFDLN NNVLKYKD+M
Sbjct: 241 LSQMEGRGGDTTAIKDICKIFDLNANNVLKYKDRM 275

[Close]

BLAST of Carg13896 vs. ExPASy TrEMBL
Match: A0A6J1D1E8 (uncharacterized protein LOC111016104 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111016104 PE=4 SV=1)

HSP 1 Score: 462.6 bits (1189), Expect = 1.1e-126
Identity = 240/275 (87.27%), Postives = 253/275 (92.00%), Query Frame = 0


Query: 1   MRARLVVFPIRGRNWCFSRSVDPAASDSASTQTPSTLKDLWTKISSPSSSKSDALSSSTS 60
           MRARLVVFPIRGRNWCF RS+DPAASDSAS+QTPSTLKDLW +ISS SSSKSDA SS+TS
Sbjct: 1   MRARLVVFPIRGRNWCFGRSIDPAASDSASSQTPSTLKDLWIRISSSSSSKSDAHSSTTS 60

Query: 61  SSNAEIVTDFISFKMNKAWTALEKAPDGSFKNKLHGIGLKLLSRVKPSEIFLKSITKDVT 120
           SSNAEIVTDFISFKMNKAWTALE AP+GSFKNKLHGIGLKLLSRVKP EIFLKSITKDVT
Sbjct: 61  SSNAEIVTDFISFKMNKAWTALENAPNGSFKNKLHGIGLKLLSRVKPDEIFLKSITKDVT 120

Query: 121 SVEIAYPSSLNPRLVRRRLRHIALRGTAIHKKHFYGSVSLLPLASAFTILPLPNIPFFWV 180
           +VEI YPSSLNPRLVRRRLRHIALRGTAIHKK+FYGSVSLLP+ SAFT+LPLPNIPFFWV
Sbjct: 121 NVEITYPSSLNPRLVRRRLRHIALRGTAIHKKYFYGSVSLLPVTSAFTVLPLPNIPFFWV 180

Query: 181 LFRTYSHWRALKGSEILLQLVSDRSYSCNSSTDGNITVNTVQRHPGSTLDLQPSKELDKF 240
           LFRTYSHWRALKGSE LLQLVSDRSYS NSSTDGN TV+ V++HPGSTL   PSKELDK 
Sbjct: 181 LFRTYSHWRALKGSEKLLQLVSDRSYSFNSSTDGNKTVHKVRQHPGSTL---PSKELDKI 240

Query: 241 LSQMEGSDDITTTIKDICKIFDLNMNNVLKYKDKM 276
           LSQMEG    TT IKDICKIFDLN NNVLKYKD+M
Sbjct: 241 LSQMEGRGGDTTAIKDICKIFDLNANNVLKYKDRM 272

[Close]

BLAST of Carg13896 vs. ExPASy TrEMBL
Match: A0A1S3CGF0 (uncharacterized protein LOC103500639 OS=Cucumis melo OX=3656 GN=LOC103500639 PE=4 SV=1)

HSP 1 Score: 440.3 bits (1131), Expect = 6.1e-120
Identity = 230/276 (83.33%), Postives = 246/276 (89.13%), Query Frame = 0


Query: 1   MRARLVVFPIRGRNWCFSRSVDPAASDSASTQTPSTLKDLWTKI-SSPSSSKSDALSSST 60
           MRARLVVFPIRGRNWCFSRS+DP  SDSAS QTPST KDLWTKI SS SSSKS ALS + 
Sbjct: 1   MRARLVVFPIRGRNWCFSRSIDPTVSDSASAQTPSTFKDLWTKISSSSSSSKSGALSIAN 60

Query: 61  SSSNAEIVTDFISFKMNKAWTALEKAPDGSFKNKLHGIGLKLLSRVKPSEIFLKSITKDV 120
           +S+NAEIVTDFISFKMNKAWTALEKAPDGSFKNKLHGIGLKLLSRVKPSEIFLKSITKDV
Sbjct: 61  ASNNAEIVTDFISFKMNKAWTALEKAPDGSFKNKLHGIGLKLLSRVKPSEIFLKSITKDV 120

Query: 121 TSVEIAYPSSLNPRLVRRRLRHIALRGTAIHKKHFYGSVSLLPLASAFTILPLPNIPFFW 180
           TSVEI YPSSLNPRLVRRRLRHIA RGT IH+K+FYGSVSL PLASAFTILPLPNIPFFW
Sbjct: 121 TSVEITYPSSLNPRLVRRRLRHIAFRGTVIHRKYFYGSVSLFPLASAFTILPLPNIPFFW 180

Query: 181 VLFRTYSHWRALKGSEILLQLVSDRSYSCNSSTDGNITVNTVQRHPGSTLDLQPSKELDK 240
           VLFRTYSHWRAL+GSE LLQLVSDRSY  NSS+DG    + VQ++ G  LD+QPSKELDK
Sbjct: 181 VLFRTYSHWRALQGSEKLLQLVSDRSYPGNSSSDGKKNEDKVQQYSGPALDMQPSKELDK 240

Query: 241 FLSQMEGSDDITTTIKDICKIFDLNMNNVLKYKDKM 276
           FLSQME S DI T I+DICK+FDLN+ NVLKYKD +
Sbjct: 241 FLSQMEASGDI-TAIRDICKMFDLNIGNVLKYKDAL 275

[Close]

BLAST of Carg13896 vs. TAIR 10
Match: AT1G53760.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plasma membrane, plastid, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2343 (InterPro:IPR018786); Has 171 Blast hits to 171 proteins in 90 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 127; Plants - 41; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )

HSP 1 Score: 308.9 bits (790), Expect = 4.0e-84
Identity = 168/281 (59.79%), Postives = 207/281 (73.67%), Query Frame = 0


Query: 1   MRARLVVFPIRGRNWCFSRSVDPAASDSASTQTPSTLKDLWTKISSPSSSKSDALSSSTS 60
           MRARLVVFPI+G+ WCFSRSVDP A+ S S  TP+T++ LW KISS          S   
Sbjct: 1   MRARLVVFPIKGKKWCFSRSVDPFAAQSPSGVTPTTVRGLWKKISS---------ESKPI 60

Query: 61  SSNAEIVTDFISFKMNKAWTALEKAPDGSFKNKLHGIGLKLLSRVKPSEIFLKSITKDVT 120
           ++NAE++ DFIS KMNKAW  LEKAPDGS KNK+HG GLKLL+RVKPSEIFLKSI+K+VT
Sbjct: 61  NANAELLVDFISDKMNKAWVGLEKAPDGSIKNKIHGFGLKLLARVKPSEIFLKSISKEVT 120

Query: 121 SVEIAYPSSLNPRLVRRRLRHIALRGTAIHKKHFYGSVSLLPLASAFTILPLPNIPFFWV 180
           SV++ YP SL+PRLVRRRLRHIA+ GT +HKK+  GSV+LLPL SAF +LPLPNIPFFWV
Sbjct: 121 SVQVTYPPSLDPRLVRRRLRHIAMSGTILHKKYLVGSVTLLPLTSAFMVLPLPNIPFFWV 180

Query: 181 LFRTYSHWRALKGSEILLQLVS-----DRSYSCNSSTDG-NITVNTVQRHPGSTLDLQPS 240
           LFRTYSHWRAL+GSE LL+L+S     D+  S + + +  N      Q+    T  L PS
Sbjct: 181 LFRTYSHWRALQGSEKLLKLISNEANPDKPDSTDDADESKNSNTKPEQKSQSPTCILLPS 240

Query: 241 KELDKFLSQM--EGSDDITTTIKDICKIFDLNMNNVLKYKD 274
           +EL + + +   EG D+   TI +ICK FDLN N+VLKY++
Sbjct: 241 EELYQLIREASEEGLDE--ATIIEICKSFDLNKNDVLKYRN 270

[Close]

BLAST of Carg13896 vs. TAIR 10
Match: AT1G53760.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2343 (InterPro:IPR018786). )

HSP 1 Score: 268.9 bits (686), Expect = 4.6e-72
Identity = 134/192 (69.79%), Postives = 157/192 (81.77%), Query Frame = 0


Query: 1   MRARLVVFPIRGRNWCFSRSVDPAASDSASTQTPSTLKDLWTKISSPSSSKSDALSSSTS 60
           MRARLVVFPI+G+ WCFSRSVDP A+ S S  TP+T++ LW KISS          S   
Sbjct: 1   MRARLVVFPIKGKKWCFSRSVDPFAAQSPSGVTPTTVRGLWKKISS---------ESKPI 60

Query: 61  SSNAEIVTDFISFKMNKAWTALEKAPDGSFKNKLHGIGLKLLSRVKPSEIFLKSITKDVT 120
           ++NAE++ DFIS KMNKAW  LEKAPDGS KNK+HG GLKLL+RVKPSEIFLKSI+K+VT
Sbjct: 61  NANAELLVDFISDKMNKAWVGLEKAPDGSIKNKIHGFGLKLLARVKPSEIFLKSISKEVT 120

Query: 121 SVEIAYPSSLNPRLVRRRLRHIALRGTAIHKKHFYGSVSLLPLASAFTILPLPNIPFFWV 180
           SV++ YP SL+PRLVRRRLRHIA+ GT +HKK+  GSV+LLPL SAF +LPLPNIPFFWV
Sbjct: 121 SVQVTYPPSLDPRLVRRRLRHIAMSGTILHKKYLVGSVTLLPLTSAFMVLPLPNIPFFWV 180

Query: 181 LFRTYSHWRALK 193
           LFRTYSHWRAL+
Sbjct: 181 LFRTYSHWRALQ 183

The following BLAST results are available for this feature:

BLAST of Carg13896 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7025932.1	2.9e-148	100.00	hypothetical protein SDJN02_12430 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6593588.1	1.9e-147	99.64	hypothetical protein SDJN03_13064, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022964630.1	5.4e-147	99.27	uncharacterized protein LOC111464584 [Cucurbita moschata]	[more]
XP_023000133.1	3.5e-146	98.91	uncharacterized protein LOC111494421 [Cucurbita maxima] >XP_023513567.1 uncharac...	[more]
XP_022147084.1	1.3e-129	88.36	uncharacterized protein LOC111016104 isoform X1 [Momordica charantia]	[more]

BLAST of Carg13896 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O13942	6.2e-05	27.78	Uncharacterized protein C23H3.12c OS=Schizosaccharomyces pombe (strain 972 / ATC...	[more]

BLAST of Carg13896 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HLD1	2.6e-147	99.27	uncharacterized protein LOC111464584 OS=Cucurbita moschata OX=3662 GN=LOC1114645...	[more]
A0A6J1KLS4	1.7e-146	98.91	uncharacterized protein LOC111494421 OS=Cucurbita maxima OX=3661 GN=LOC111494421...	[more]
A0A6J1CZZ6	6.4e-130	88.36	uncharacterized protein LOC111016104 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1D1E8	1.1e-126	87.27	uncharacterized protein LOC111016104 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A1S3CGF0	6.1e-120	83.33	uncharacterized protein LOC103500639 OS=Cucumis melo OX=3656 GN=LOC103500639 PE=...	[more]

BLAST of Carg13896 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G53760.1	4.0e-84	59.79	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G53760.2	4.6e-72	69.79	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018786	Protein of unknown function DUF2343	PFAM	PF10173	Mit_KHE1	coord: 4..201 e-value: 6.5E-41 score: 140.5
IPR018786	Protein of unknown function DUF2343	PANTHER	PTHR28062	K+-H+ EXCHANGE-LIKE PROTEIN	coord: 1..275

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg13896-RA	Carg13896-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005622	intracellular anatomical structure
molecular_function	GO:0140657	ATP-dependent activity