Carg13865 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg13865
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	B box-type domain-containing protein
Location	Carg_Chr08: 4884888 .. 4886589 (-)
RNA-Seq Expression	Carg13865
Synteny	Carg13865

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGTGGATGGAATGAGAGTGAAGGAGGAGGAGGTGGAGGAGCGTGTACCCATTTTTACTGTAAAGAAACAGAGAAAAGTCACTGTTTCACGTCTTGTCATTTACCACATGCTTCACTCAGACCAAAATCAAAATCAAAATCAAAATCAAAATCAAAATCAAAATCAAAATCAAACCTCTCCTCCCTCTTTCACAAAATTCTGAATTACAAAGCAATTGATATGGAAGAAACGTAGGCCATTTTGTTTAGGGTTTTCCTCGAGGATCTTCCGGACATCCATTACATTTCTCTCTCTCTCTCTCTCTCTTCTCTTTATAATGTCCCATTACTCCTCTCCTCTCATCTCTCCGCCGTCTCTTTCTCTCTCCCTATGCCTTCTTAAACCCTAATCCCTCTCTCTCTCTCTCTCTCTCTCACGTTTAAAAAAAAAAAAGAAATGGTGGGTTAATTCTGTTCTCTCTCTGTCTCTCTGTTCCTCGCAAGAATTGGTTCTAAATTGCTCTGTTCTTGTTTTTTAATTGTCCTCAGTACACGGTACCCATATGGCTGCAAGCGCTTCTGAGCGAGAAATTCTTCAATGCCTGTGTGGTTCATGAAGATGCCAAAAAGAACGAGAAAAACATCTTCTGTTTCGACTGTTCCCTCGGTATCTGCCCGCACTGCTTGTCCTCTCACCGCTCTCACAAACTCCTCCAGGTACAATAATTCACAATCCCCAACTCTTTCAACAACCCCTTTTCTCCACAACTCTGTTCAATTCCGCTGTGTTTCCTTTTCAGATTAGGCGATATGTTTATCACGATGTCATTAGATTGGACGATGCTGTGAAGCTAATTGACTGTGCTTTTGTTCAAGTAAGTAAATCTTTAATTAATTCTCACCATGCTTTTGCTTGCAACACACACCAAAAATGTTGATGGGGGGGGTTTTTGTTATTAATAGTCGTACACTACGAATAGTGCGAAAGTGGTGTTTCTGAAACAGAGGCCACAGACCAGAAACTTCAGAGGCTCCTCCGGCAACCTCTGTAGTACCTGCGATAGAAGCCTTCAAGACCCTTATCTCTTTTGCTCTCTCTCTTGCAAGGTTCGATTCGGTTTCTGTTTTTTTTCTCTTCATTTTTTGCTTCTTGTTCTTGTGTTCTAAACTGGGTTTTTGTTTCTTTTCCTTGCCTTGGGTTTCGTTATATAGATTGATTATCTGGTAAAGGCGCAAGGTGGGGTTTCCAGGCATCTTTTGGAGTGCAATTTCTTGCCATTACCCGAACCGGTTTGGGACGACGGAATGATTATGACGCCTGACTCTGTTCTGGAACCGGCCGGTTCGACCCGAACCTCTTCCAGTTCCGACGGCGGTAGAGTGTTGGAGATGAGGACTACTATTGCTTCGACGGCGACCACGGACTTTGTGAAGAAAAAGAGAAGTAGCTTGACGGCTGCTGCGGCGGCGTATCGGACAACGTGCCGGCCGGCTTGCTGTTCGGTGACGGTTTCCGAGACGTCTGGGAGTCTGATGAGCCGGAGAAAAAGTACCCCGCAGCGGGCCCCACTCTATTGAATTTTCATTTTCTATTTATTTTTCAAGTGTAGTACTGTAGTGGGCAGTATGTAAGGGGGGAGGTTTTTTTAGGGACAGAGATGTCATTTTGTGGTTTCTCATGGGGGTGTTTTGGGAATATATGAAGAATTAAATAGAATG

mRNA sequence

ATGAAGGTGGATGGAATGAGAGTGAAGGAGGAGGAGGTGGAGGAGCGTGTACCCATTTTTACTTACACGGTACCCATATGGCTGCAAGCGCTTCTGAGCGAGAAATTCTTCAATGCCTGTGTGGTTCATGAAGATGCCAAAAAGAACGAGAAAAACATCTTCTGTTTCGACTGTTCCCTCGGTATCTGCCCGCACTGCTTGTCCTCTCACCGCTCTCACAAACTCCTCCAGATTAGGCGATATGTTTATCACGATGTCATTAGATTGGACGATGCTGTGAAGCTAATTGACTGTGCTTTTGTTCAATCGTACACTACGAATAGTGCGAAAGTGGTGTTTCTGAAACAGAGGCCACAGACCAGAAACTTCAGAGGCTCCTCCGGCAACCTCTGTAGTACCTGCGATAGAAGCCTTCAAGACCCTTATCTCTTTTGCTCTCTCTCTTGCAAGATTGATTATCTGGTAAAGGCGCAAGGTGGGGTTTCCAGGCATCTTTTGGAGTGCAATTTCTTGCCATTACCCGAACCGGTTTGGGACGACGGAATGATTATGACGCCTGACTCTGTTCTGGAACCGGCCGGTTCGACCCGAACCTCTTCCAGTTCCGACGGCGGTAGAGTGTTGGAGATGAGGACTACTATTGCTTCGACGGCGACCACGGACTTTGTGAAGAAAAAGAGAAGTAGCTTGACGGCTGCTGCGGCGGCGTATCGGACAACGTGCCGGCCGGCTTGCTGTTCGGTGACGGTTTCCGAGACGTCTGGGAGTCTGATGAGCCGGAGAAAAAGTACCCCGCAGCGGGCCCCACTCTATTGAATTTTCATTTTCTATTTATTTTTCAAGTGTAGTACTGTAGTGGGCAGTATGTAAGGGGGGAGGTTTTTTTAGGGACAGAGATGTCATTTTGTGGTTTCTCATGGGGGTGTTTTGGGAATATATGAAGAATTAAATAGAATG

Coding sequence (CDS)

ATGAAGGTGGATGGAATGAGAGTGAAGGAGGAGGAGGTGGAGGAGCGTGTACCCATTTTTACTTACACGGTACCCATATGGCTGCAAGCGCTTCTGAGCGAGAAATTCTTCAATGCCTGTGTGGTTCATGAAGATGCCAAAAAGAACGAGAAAAACATCTTCTGTTTCGACTGTTCCCTCGGTATCTGCCCGCACTGCTTGTCCTCTCACCGCTCTCACAAACTCCTCCAGATTAGGCGATATGTTTATCACGATGTCATTAGATTGGACGATGCTGTGAAGCTAATTGACTGTGCTTTTGTTCAATCGTACACTACGAATAGTGCGAAAGTGGTGTTTCTGAAACAGAGGCCACAGACCAGAAACTTCAGAGGCTCCTCCGGCAACCTCTGTAGTACCTGCGATAGAAGCCTTCAAGACCCTTATCTCTTTTGCTCTCTCTCTTGCAAGATTGATTATCTGGTAAAGGCGCAAGGTGGGGTTTCCAGGCATCTTTTGGAGTGCAATTTCTTGCCATTACCCGAACCGGTTTGGGACGACGGAATGATTATGACGCCTGACTCTGTTCTGGAACCGGCCGGTTCGACCCGAACCTCTTCCAGTTCCGACGGCGGTAGAGTGTTGGAGATGAGGACTACTATTGCTTCGACGGCGACCACGGACTTTGTGAAGAAAAAGAGAAGTAGCTTGACGGCTGCTGCGGCGGCGTATCGGACAACGTGCCGGCCGGCTTGCTGTTCGGTGACGGTTTCCGAGACGTCTGGGAGTCTGATGAGCCGGAGAAAAAGTACCCCGCAGCGGGCCCCACTCTATTGA

Protein sequence

MKVDGMRVKEEEVEERVPIFTYTVPIWLQALLSEKFFNACVVHEDAKKNEKNIFCFDCSLGICPHCLSSHRSHKLLQIRRYVYHDVIRLDDAVKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQDPYLFCSLSCKIDYLVKAQGGVSRHLLECNFLPLPEPVWDDGMIMTPDSVLEPAGSTRTSSSSDGGRVLEMRTTIASTATTDFVKKKRSSLTAAAAAYRTTCRPACCSVTVSETSGSLMSRRKSTPQRAPLY

Homology

[Close]

BLAST of Carg13865 vs. NCBI nr
Match: KAG7025963.1 (hypothetical protein SDJN02_12461, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 546.6 bits (1407), Expect = 1.2e-151
Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0


Query: 1   MKVDGMRVKEEEVEERVPIFTYTVPIWLQALLSEKFFNACVVHEDAKKNEKNIFCFDCSL 60
           MKVDGMRVKEEEVEERVPIFTYTVPIWLQALLSEKFFNACVVHEDAKKNEKNIFCFDCSL
Sbjct: 1   MKVDGMRVKEEEVEERVPIFTYTVPIWLQALLSEKFFNACVVHEDAKKNEKNIFCFDCSL 60

Query: 61  GICPHCLSSHRSHKLLQIRRYVYHDVIRLDDAVKLIDCAFVQSYTTNSAKVVFLKQRPQT 120
           GICPHCLSSHRSHKLLQIRRYVYHDVIRLDDAVKLIDCAFVQSYTTNSAKVVFLKQRPQT
Sbjct: 61  GICPHCLSSHRSHKLLQIRRYVYHDVIRLDDAVKLIDCAFVQSYTTNSAKVVFLKQRPQT 120

Query: 121 RNFRGSSGNLCSTCDRSLQDPYLFCSLSCKIDYLVKAQGGVSRHLLECNFLPLPEPVWDD 180
           RNFRGSSGNLCSTCDRSLQDPYLFCSLSCKIDYLVKAQGGVSRHLLECNFLPLPEPVWDD
Sbjct: 121 RNFRGSSGNLCSTCDRSLQDPYLFCSLSCKIDYLVKAQGGVSRHLLECNFLPLPEPVWDD 180

Query: 181 GMIMTPDSVLEPAGSTRTSSSSDGGRVLEMRTTIASTATTDFVKKKRSSLTAAAAAYRTT 240
           GMIMTPDSVLEPAGSTRTSSSSDGGRVLEMRTTIASTATTDFVKKKRSSLTAAAAAYRTT
Sbjct: 181 GMIMTPDSVLEPAGSTRTSSSSDGGRVLEMRTTIASTATTDFVKKKRSSLTAAAAAYRTT 240

Query: 241 CRPACCSVTVSETSGSLMSRRKSTPQRAPLY 272
           CRPACCSVTVSETSGSLMSRRKSTPQRAPLY
Sbjct: 241 CRPACCSVTVSETSGSLMSRRKSTPQRAPLY 271

[Close]

BLAST of Carg13865 vs. NCBI nr
Match: KAG6593617.1 (hypothetical protein SDJN03_13093, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 543.9 bits (1400), Expect = 7.9e-151
Identity = 270/271 (99.63%), Postives = 270/271 (99.63%), Query Frame = 0


Query: 1   MKVDGMRVKEEEVEERVPIFTYTVPIWLQALLSEKFFNACVVHEDAKKNEKNIFCFDCSL 60
           MKVDGMR KEEEVEERVPIFTYTVPIWLQALLSEKFFNACVVHEDAKKNEKNIFCFDCSL
Sbjct: 1   MKVDGMRGKEEEVEERVPIFTYTVPIWLQALLSEKFFNACVVHEDAKKNEKNIFCFDCSL 60

Query: 61  GICPHCLSSHRSHKLLQIRRYVYHDVIRLDDAVKLIDCAFVQSYTTNSAKVVFLKQRPQT 120
           GICPHCLSSHRSHKLLQIRRYVYHDVIRLDDAVKLIDCAFVQSYTTNSAKVVFLKQRPQT
Sbjct: 61  GICPHCLSSHRSHKLLQIRRYVYHDVIRLDDAVKLIDCAFVQSYTTNSAKVVFLKQRPQT 120

Query: 121 RNFRGSSGNLCSTCDRSLQDPYLFCSLSCKIDYLVKAQGGVSRHLLECNFLPLPEPVWDD 180
           RNFRGSSGNLCSTCDRSLQDPYLFCSLSCKIDYLVKAQGGVSRHLLECNFLPLPEPVWDD
Sbjct: 121 RNFRGSSGNLCSTCDRSLQDPYLFCSLSCKIDYLVKAQGGVSRHLLECNFLPLPEPVWDD 180

Query: 181 GMIMTPDSVLEPAGSTRTSSSSDGGRVLEMRTTIASTATTDFVKKKRSSLTAAAAAYRTT 240
           GMIMTPDSVLEPAGSTRTSSSSDGGRVLEMRTTIASTATTDFVKKKRSSLTAAAAAYRTT
Sbjct: 181 GMIMTPDSVLEPAGSTRTSSSSDGGRVLEMRTTIASTATTDFVKKKRSSLTAAAAAYRTT 240

Query: 241 CRPACCSVTVSETSGSLMSRRKSTPQRAPLY 272
           CRPACCSVTVSETSGSLMSRRKSTPQRAPLY
Sbjct: 241 CRPACCSVTVSETSGSLMSRRKSTPQRAPLY 271

[Close]

BLAST of Carg13865 vs. NCBI nr
Match: XP_023514505.1 (uncharacterized protein LOC111778763 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 505.8 bits (1301), Expect = 2.4e-139
Identity = 249/250 (99.60%), Postives = 250/250 (100.00%), Query Frame = 0


Query: 22  YTVPIWLQALLSEKFFNACVVHEDAKKNEKNIFCFDCSLGICPHCLSSHRSHKLLQIRRY 81
           YTVPIW+QALLSEKFFNACVVHEDAKKNEKNIFCFDCSLGICPHCLSSHRSHKLLQIRRY
Sbjct: 2   YTVPIWVQALLSEKFFNACVVHEDAKKNEKNIFCFDCSLGICPHCLSSHRSHKLLQIRRY 61

Query: 82  VYHDVIRLDDAVKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQDP 141
           VYHDVIRLDDAVKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQDP
Sbjct: 62  VYHDVIRLDDAVKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQDP 121

Query: 142 YLFCSLSCKIDYLVKAQGGVSRHLLECNFLPLPEPVWDDGMIMTPDSVLEPAGSTRTSSS 201
           YLFCSLSCKIDYLVKAQGGVSRHLLECNFLPLPEPVWDDGMIMTPDSVLEPAGSTRTSSS
Sbjct: 122 YLFCSLSCKIDYLVKAQGGVSRHLLECNFLPLPEPVWDDGMIMTPDSVLEPAGSTRTSSS 181

Query: 202 SDGGRVLEMRTTIASTATTDFVKKKRSSLTAAAAAYRTTCRPACCSVTVSETSGSLMSRR 261
           SDGGRVLEMRTTIASTATTDFVKKKRSSLTAAAAAYRTTCRPACCSVTVSETSGSLMSRR
Sbjct: 182 SDGGRVLEMRTTIASTATTDFVKKKRSSLTAAAAAYRTTCRPACCSVTVSETSGSLMSRR 241

Query: 262 KSTPQRAPLY 272
           KSTPQRAPLY
Sbjct: 242 KSTPQRAPLY 251

[Close]

BLAST of Carg13865 vs. NCBI nr
Match: XP_022964357.1 (uncharacterized protein LOC111464390 [Cucurbita moschata])

HSP 1 Score: 505.0 bits (1299), Expect = 4.1e-139
Identity = 249/250 (99.60%), Postives = 249/250 (99.60%), Query Frame = 0


Query: 22  YTVPIWLQALLSEKFFNACVVHEDAKKNEKNIFCFDCSLGICPHCLSSHRSHKLLQIRRY 81
           YTVPIWLQ LLSEKFFNACVVHEDAKKNEKNIFCFDCSLGICPHCLSSHRSHKLLQIRRY
Sbjct: 2   YTVPIWLQPLLSEKFFNACVVHEDAKKNEKNIFCFDCSLGICPHCLSSHRSHKLLQIRRY 61

Query: 82  VYHDVIRLDDAVKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQDP 141
           VYHDVIRLDDAVKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQDP
Sbjct: 62  VYHDVIRLDDAVKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQDP 121

Query: 142 YLFCSLSCKIDYLVKAQGGVSRHLLECNFLPLPEPVWDDGMIMTPDSVLEPAGSTRTSSS 201
           YLFCSLSCKIDYLVKAQGGVSRHLLECNFLPLPEPVWDDGMIMTPDSVLEPAGSTRTSSS
Sbjct: 122 YLFCSLSCKIDYLVKAQGGVSRHLLECNFLPLPEPVWDDGMIMTPDSVLEPAGSTRTSSS 181

Query: 202 SDGGRVLEMRTTIASTATTDFVKKKRSSLTAAAAAYRTTCRPACCSVTVSETSGSLMSRR 261
           SDGGRVLEMRTTIASTATTDFVKKKRSSLTAAAAAYRTTCRPACCSVTVSETSGSLMSRR
Sbjct: 182 SDGGRVLEMRTTIASTATTDFVKKKRSSLTAAAAAYRTTCRPACCSVTVSETSGSLMSRR 241

Query: 262 KSTPQRAPLY 272
           KSTPQRAPLY
Sbjct: 242 KSTPQRAPLY 251

[Close]

BLAST of Carg13865 vs. NCBI nr
Match: XP_023000095.1 (uncharacterized protein LOC111494393 [Cucurbita maxima])

HSP 1 Score: 490.7 bits (1262), Expect = 7.9e-135
Identity = 242/250 (96.80%), Postives = 244/250 (97.60%), Query Frame = 0


Query: 22  YTVPIWLQALLSEKFFNACVVHEDAKKNEKNIFCFDCSLGICPHCLSSHRSHKLLQIRRY 81
           Y +PIWLQALLSEKFFNACV+HEDAKKNEKNIFCFDCSLGICPHCLSSHRSHKLLQIRRY
Sbjct: 2   YALPIWLQALLSEKFFNACVLHEDAKKNEKNIFCFDCSLGICPHCLSSHRSHKLLQIRRY 61

Query: 82  VYHDVIRLDDAVKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQDP 141
           VYHDVIRLDDAVKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQDP
Sbjct: 62  VYHDVIRLDDAVKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQDP 121

Query: 142 YLFCSLSCKIDYLVKAQGGVSRHLLECNFLPLPEPVWDDGMIMTPDSVLEPAGSTRTSSS 201
           Y FCSLSCKIDYLVKAQGGVSRHLLECNFLPLPEP WDDGMIMTPDSVLEPAGSTRTSSS
Sbjct: 122 YHFCSLSCKIDYLVKAQGGVSRHLLECNFLPLPEPAWDDGMIMTPDSVLEPAGSTRTSSS 181

Query: 202 SDGGRVLEMRTTIASTATTDFVKKKRSSLTAAAAAYRTTCRPACCSVTVSETSGSLMSRR 261
           SDGGR LEMRTTIASTATTDFVKKKRSSLTAAAAAYRTTCRPA CSVTVSETSGSLMSRR
Sbjct: 182 SDGGRALEMRTTIASTATTDFVKKKRSSLTAAAAAYRTTCRPARCSVTVSETSGSLMSRR 241

Query: 262 KSTPQRAPLY 272
           K TPQRAPLY
Sbjct: 242 KGTPQRAPLY 251

[Close]

BLAST of Carg13865 vs. ExPASy Swiss-Prot
Match: Q1G3Q4 (Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=RITF1 PE=1 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 4.6e-53
Identity = 114/258 (44.19%), Postives = 155/258 (60.08%), Query Frame = 0


Query: 25  PIWLQALLSEKFFNACVVHEDAKKNEKNIFCFDCSLGICPHCLSSHRSHKLLQIRRYVYH 84
           P WL AL +EKFF  C  HE AKKNE+N+ C DC   +CPHC+ SHR H+LLQ+RRYVYH
Sbjct: 6   PAWLDALYAEKFFVGCPYHETAKKNERNVCCLDCCTSLCPHCVPSHRFHRLLQVRRYVYH 65

Query: 85  DVIRLDDAVKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQDPYLF 144
           DV+RL+D  KLIDC+ VQ+YT NSAKVVF+K+RPQ R F+G +GN C++CDRSLQ+PY+ 
Sbjct: 66  DVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKG-AGNYCTSCDRSLQEPYIH 125

Query: 145 CSLSCKIDYLVKAQGGVSRHLLECNFLPL------PEPVWDDGMIM---TPDSVLEPAGS 204
           CSL CK+D+++K    ++  L  C+ L L      P+ +  D  +    TP S +     
Sbjct: 126 CSLGCKVDFVMKRYRDITPFLKPCHTLTLGPDYIIPQDLLTDDEVAAYETPRSTVVDGDE 185

Query: 205 TRTSSSSDGGRVLEMRTTIASTATTDFVKKKRSSLTAAAAAYRTTCRPACCSVTVSETSG 264
           + + SS+             +  TT  V+KKR+     A       + A     VSE   
Sbjct: 186 SMSWSSASSDNNNAGAAAAYAATTTHVVRKKRTGFCLCA-------KSANSYKEVSEDPD 245

Query: 265 SL---MSRRKSTPQRAPL 271
            +   ++RRK  PQR+PL
Sbjct: 246 DISACINRRKGVPQRSPL 255

[Close]

BLAST of Carg13865 vs. ExPASy TrEMBL
Match: A0A6J1HHL3 (uncharacterized protein LOC111464390 OS=Cucurbita moschata OX=3662 GN=LOC111464390 PE=4 SV=1)

HSP 1 Score: 505.0 bits (1299), Expect = 2.0e-139
Identity = 249/250 (99.60%), Postives = 249/250 (99.60%), Query Frame = 0


Query: 22  YTVPIWLQALLSEKFFNACVVHEDAKKNEKNIFCFDCSLGICPHCLSSHRSHKLLQIRRY 81
           YTVPIWLQ LLSEKFFNACVVHEDAKKNEKNIFCFDCSLGICPHCLSSHRSHKLLQIRRY
Sbjct: 2   YTVPIWLQPLLSEKFFNACVVHEDAKKNEKNIFCFDCSLGICPHCLSSHRSHKLLQIRRY 61

Query: 82  VYHDVIRLDDAVKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQDP 141
           VYHDVIRLDDAVKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQDP
Sbjct: 62  VYHDVIRLDDAVKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQDP 121

Query: 142 YLFCSLSCKIDYLVKAQGGVSRHLLECNFLPLPEPVWDDGMIMTPDSVLEPAGSTRTSSS 201
           YLFCSLSCKIDYLVKAQGGVSRHLLECNFLPLPEPVWDDGMIMTPDSVLEPAGSTRTSSS
Sbjct: 122 YLFCSLSCKIDYLVKAQGGVSRHLLECNFLPLPEPVWDDGMIMTPDSVLEPAGSTRTSSS 181

Query: 202 SDGGRVLEMRTTIASTATTDFVKKKRSSLTAAAAAYRTTCRPACCSVTVSETSGSLMSRR 261
           SDGGRVLEMRTTIASTATTDFVKKKRSSLTAAAAAYRTTCRPACCSVTVSETSGSLMSRR
Sbjct: 182 SDGGRVLEMRTTIASTATTDFVKKKRSSLTAAAAAYRTTCRPACCSVTVSETSGSLMSRR 241

Query: 262 KSTPQRAPLY 272
           KSTPQRAPLY
Sbjct: 242 KSTPQRAPLY 251

[Close]

BLAST of Carg13865 vs. ExPASy TrEMBL
Match: A0A6J1KHE0 (uncharacterized protein LOC111494393 OS=Cucurbita maxima OX=3661 GN=LOC111494393 PE=4 SV=1)

HSP 1 Score: 490.7 bits (1262), Expect = 3.8e-135
Identity = 242/250 (96.80%), Postives = 244/250 (97.60%), Query Frame = 0


Query: 22  YTVPIWLQALLSEKFFNACVVHEDAKKNEKNIFCFDCSLGICPHCLSSHRSHKLLQIRRY 81
           Y +PIWLQALLSEKFFNACV+HEDAKKNEKNIFCFDCSLGICPHCLSSHRSHKLLQIRRY
Sbjct: 2   YALPIWLQALLSEKFFNACVLHEDAKKNEKNIFCFDCSLGICPHCLSSHRSHKLLQIRRY 61

Query: 82  VYHDVIRLDDAVKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQDP 141
           VYHDVIRLDDAVKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQDP
Sbjct: 62  VYHDVIRLDDAVKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQDP 121

Query: 142 YLFCSLSCKIDYLVKAQGGVSRHLLECNFLPLPEPVWDDGMIMTPDSVLEPAGSTRTSSS 201
           Y FCSLSCKIDYLVKAQGGVSRHLLECNFLPLPEP WDDGMIMTPDSVLEPAGSTRTSSS
Sbjct: 122 YHFCSLSCKIDYLVKAQGGVSRHLLECNFLPLPEPAWDDGMIMTPDSVLEPAGSTRTSSS 181

Query: 202 SDGGRVLEMRTTIASTATTDFVKKKRSSLTAAAAAYRTTCRPACCSVTVSETSGSLMSRR 261
           SDGGR LEMRTTIASTATTDFVKKKRSSLTAAAAAYRTTCRPA CSVTVSETSGSLMSRR
Sbjct: 182 SDGGRALEMRTTIASTATTDFVKKKRSSLTAAAAAYRTTCRPARCSVTVSETSGSLMSRR 241

Query: 262 KSTPQRAPLY 272
           K TPQRAPLY
Sbjct: 242 KGTPQRAPLY 251

[Close]

BLAST of Carg13865 vs. ExPASy TrEMBL
Match: A0A0A0KCM1 (B box-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G109690 PE=4 SV=1)

HSP 1 Score: 439.9 bits (1130), Expect = 7.8e-120
Identity = 215/249 (86.35%), Postives = 227/249 (91.16%), Query Frame = 0


Query: 23  TVPIWLQALLSEKFFNACVVHEDAKKNEKNIFCFDCSLGICPHCLSSHRSHKLLQIRRYV 82
           ++PIWLQALL+EKFFNACVVHEDAKKNEKNIFCFDCSLGICPHCLSSH SHKLLQIRRYV
Sbjct: 3   SLPIWLQALLTEKFFNACVVHEDAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYV 62

Query: 83  YHDVIRLDDAVKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQDPY 142
           YHDVIRLDDA KLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQDPY
Sbjct: 63  YHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQDPY 122

Query: 143 LFCSLSCKIDYLVKAQGGVSRHLLECNFLPLPEPVWDDGMIMTPDSVLEPAGSTRTSSSS 202
           LFCS+SCKIDYLVK QGG+S+HLLECNFLPLPEP WDDG++MTPDSVLEP GS R+SS S
Sbjct: 123 LFCSVSCKIDYLVKTQGGISKHLLECNFLPLPEPGWDDGLMMTPDSVLEPVGSNRSSSGS 182

Query: 203 DGGRVLEMRTTIASTATTDFVKKKRSSLTAAAAAYRTTCRPACCSVTVSETSGSLMSRRK 262
           DGG       T+ STATT+FVKKKRSSLTAAAAAYR  CRP C   T+SETSGSLMSRRK
Sbjct: 183 DGGGT--EGKTLVSTATTEFVKKKRSSLTAAAAAYRAACRPVCWPGTISETSGSLMSRRK 242

Query: 263 STPQRAPLY 272
            TPQRAPLY
Sbjct: 243 GTPQRAPLY 249

[Close]

BLAST of Carg13865 vs. ExPASy TrEMBL
Match: A0A1S3C8E3 (uncharacterized protein LOC103497663 OS=Cucumis melo OX=3656 GN=LOC103497663 PE=4 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 5.6e-118
Identity = 214/249 (85.94%), Postives = 226/249 (90.76%), Query Frame = 0


Query: 23  TVPIWLQALLSEKFFNACVVHEDAKKNEKNIFCFDCSLGICPHCLSSHRSHKLLQIRRYV 82
           ++PIWLQALL+EKFFNACVVHEDAKKNEKNIFCFDCSLGICPHCLSSH SHKLLQIRRYV
Sbjct: 3   SLPIWLQALLTEKFFNACVVHEDAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYV 62

Query: 83  YHDVIRLDDAVKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQDPY 142
           YHDVIRLDDA KLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQDPY
Sbjct: 63  YHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQDPY 122

Query: 143 LFCSLSCKIDYLVKAQGGVSRHLLECNFLPLPEPVWDDGMIMTPDSVLEPAGSTRTSSSS 202
           LFCS+SCKIDYLVK QGG+S++LLECNFLPLPEP WDDG++MTPDSVLEP GSTRTSS S
Sbjct: 123 LFCSVSCKIDYLVKTQGGISKYLLECNFLPLPEPGWDDGLMMTPDSVLEPVGSTRTSSGS 182

Query: 203 DGGRVLEMRTTIASTATTDFVKKKRSSLTAAAAAYRTTCRPACCSVTVSETSGSLMSRRK 262
           DGG       T+ STATT+FVKKKRSSLT  AAAYR  CRP C   T+SETSGSLMSRRK
Sbjct: 183 DGGGT--EGKTLVSTATTEFVKKKRSSLT--AAAYRAACRPVCWPGTISETSGSLMSRRK 242

Query: 263 STPQRAPLY 272
            TPQRAPLY
Sbjct: 243 GTPQRAPLY 247

[Close]

BLAST of Carg13865 vs. ExPASy TrEMBL
Match: A0A6J1H7K0 (uncharacterized protein LOC111460295 OS=Cucurbita moschata OX=3662 GN=LOC111460295 PE=4 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 3.3e-110
Identity = 203/250 (81.20%), Postives = 219/250 (87.60%), Query Frame = 0


Query: 22  YTVPIWLQALLSEKFFNACVVHEDAKKNEKNIFCFDCSLGICPHCLSSHRSHKLLQIRRY 81
           +++PIWLQALL+ KFFNACV+HE AKKNEKNIFCFDCSLGICPHCLSSH SHKLLQIRRY
Sbjct: 2   HSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRY 61

Query: 82  VYHDVIRLDDAVKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQDP 141
           VYHDVIRLDDA KLIDCAFVQSYTTNSAKVVFL QRPQTRNFRGSSGNLCSTCDRSLQDP
Sbjct: 62  VYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQTRNFRGSSGNLCSTCDRSLQDP 121

Query: 142 YLFCSLSCKIDYLVKAQGGVSRHLLECNFLPLPEPVWDDGMIMTPDSVLEPAGSTRTSSS 201
           YLFCSLSCKIDYL+K +GGVSR+LLECNF       WDDG++MTPDSVLE  GS +TSS 
Sbjct: 122 YLFCSLSCKIDYLMKTEGGVSRNLLECNF-----SAWDDGLMMTPDSVLELGGSNQTSSG 181

Query: 202 SDGGRVLEMRTTIASTATTDFVKKKRSSLTAAAAAYRTTCRPACCSVTVSETSGSLMSRR 261
           SDGG V   R+ +ASTATT+FVKKKRSSLT   AAYR  CRPAC   T+SETSGSL+SRR
Sbjct: 182 SDGGGVEGGRSVVASTATTEFVKKKRSSLT---AAYRAACRPACWPGTISETSGSLLSRR 241

Query: 262 KSTPQRAPLY 272
           K TPQRAPLY
Sbjct: 242 KGTPQRAPLY 243

[Close]

BLAST of Carg13865 vs. TAIR 10
Match: AT3G60670.1 (PLATZ transcription factor family protein )

HSP 1 Score: 270.4 bits (690), Expect = 1.6e-72
Identity = 144/251 (57.37%), Postives = 173/251 (68.92%), Query Frame = 0


Query: 25  PIWLQALLSEKFFNACVVHEDAKKNEKNIFCFDCSLGICPHCLSSHRSHKLLQIRRYVYH 84
           P WL+ LL +KFFNAC+ HED KKNEKNI C DC L ICPHCLSSH SH+LLQIRRYVY 
Sbjct: 7   PAWLEVLLKDKFFNACLDHEDDKKNEKNILCIDCCLTICPHCLSSHTSHRLLQIRRYVYR 66

Query: 85  DVIRLDDAVKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQDPYLF 144
           DV+R++D  KL+DC+ +Q YTTNS+KVVF+ +RPQ+R FRG SGN+C TCDRSLQ PYLF
Sbjct: 67  DVLRVEDGSKLMDCSLIQPYTTNSSKVVFINERPQSRQFRG-SGNICITCDRSLQSPYLF 126

Query: 145 CSLSCKIDYLVKAQGGVSRHLLECNFLPLPEPVWDDGMIMTPDSVLEPAGSTRTSSSSDG 204
           C LSCKI  ++  Q G+S  L  CN L L     D+    TP S LEP GS RTSS S G
Sbjct: 127 CCLSCKISDVIMRQRGLSGFLRVCNVLDLT----DEVTTTTPSSTLEPTGSNRTSSESSG 186

Query: 205 --GRVLEMRTTIASTATTDFVKKKRSSLTAAAAAYRTTCR--PACCSVTVSETSGSLMSR 264
             G  +     +A TATT+ V+KKRSSL+       TTCR      S T +E   + ++R
Sbjct: 187 NEGEDMFWCQALACTATTEIVRKKRSSLS-------TTCRRVTEVVSTTNTEAPVNFLNR 245

Query: 265 RKSTPQRAPLY 272
           RK+ PQRAPLY
Sbjct: 247 RKNPPQRAPLY 245

[Close]

BLAST of Carg13865 vs. TAIR 10
Match: AT2G12646.1 (PLATZ transcription factor family protein )

HSP 1 Score: 209.5 bits (532), Expect = 3.3e-54
Identity = 114/258 (44.19%), Postives = 155/258 (60.08%), Query Frame = 0


Query: 25  PIWLQALLSEKFFNACVVHEDAKKNEKNIFCFDCSLGICPHCLSSHRSHKLLQIRRYVYH 84
           P WL AL +EKFF  C  HE AKKNE+N+ C DC   +CPHC+ SHR H+LLQ+RRYVYH
Sbjct: 6   PAWLDALYAEKFFVGCPYHETAKKNERNVCCLDCCTSLCPHCVPSHRFHRLLQVRRYVYH 65

Query: 85  DVIRLDDAVKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQDPYLF 144
           DV+RL+D  KLIDC+ VQ+YT NSAKVVF+K+RPQ R F+G +GN C++CDRSLQ+PY+ 
Sbjct: 66  DVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKG-AGNYCTSCDRSLQEPYIH 125

Query: 145 CSLSCKIDYLVKAQGGVSRHLLECNFLPL------PEPVWDDGMIM---TPDSVLEPAGS 204
           CSL CK+D+++K    ++  L  C+ L L      P+ +  D  +    TP S +     
Sbjct: 126 CSLGCKVDFVMKRYRDITPFLKPCHTLTLGPDYIIPQDLLTDDEVAAYETPRSTVVDGDE 185

Query: 205 TRTSSSSDGGRVLEMRTTIASTATTDFVKKKRSSLTAAAAAYRTTCRPACCSVTVSETSG 264
           + + SS+             +  TT  V+KKR+     A       + A     VSE   
Sbjct: 186 SMSWSSASSDNNNAGAAAAYAATTTHVVRKKRTGFCLCA-------KSANSYKEVSEDPD 245

Query: 265 SL---MSRRKSTPQRAPL 271
            +   ++RRK  PQR+PL
Sbjct: 246 DISACINRRKGVPQRSPL 255

[Close]

BLAST of Carg13865 vs. TAIR 10
Match: AT1G31040.1 (PLATZ transcription factor family protein )

HSP 1 Score: 193.0 bits (489), Expect = 3.2e-49
Identity = 87/147 (59.18%), Postives = 110/147 (74.83%), Query Frame = 0


Query: 8   VKEEEVEERVPIFTYTVPIWLQALLSEKFFNACVVHEDAKKNEKNIFCFDCSLGICPHCL 67
           V+E E EE + +   T P WL+ L++E FF++C +HE  +K+EKN+FC  C L +CPHCL
Sbjct: 2   VREGEEEEEMMMMMATKPAWLEGLMAETFFSSCGIHETRRKSEKNVFCLLCCLSVCPHCL 61

Query: 68  SSHRSHKLLQIRRYVYHDVIRLDDAVKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSS 127
            SHRSH LLQ+RRYVYHDV+RL D  KLIDC++VQ YT N AKV+FL QR Q+R     S
Sbjct: 62  PSHRSHPLLQVRRYVYHDVVRLSDLEKLIDCSYVQPYTINGAKVIFLNQRQQSR--AKVS 121

Query: 128 GNLCSTCDRSLQDPYLFCSLSCKIDYL 155
            N+C TCDR LQ+P+ FCSLSCK+DYL
Sbjct: 122 SNVCFTCDRILQEPFHFCSLSCKVDYL 146

[Close]

BLAST of Carg13865 vs. TAIR 10
Match: AT1G21000.1 (PLATZ transcription factor family protein )

HSP 1 Score: 138.7 bits (348), Expect = 7.1e-33
Identity = 72/167 (43.11%), Postives = 99/167 (59.28%), Query Frame = 0


Query: 5   GMRVKEEEVEERVPIFTYTVPIWLQALLSEKFFNACVVHEDAKKNEKNIFCFDCS-LGIC 64
           G  ++ EE E+      YT P WL  +L   +F  C +H D+ KNE N+FC DC+    C
Sbjct: 2   GPMIRTEEEED------YTSPPWLMPMLRGSYFVPCSIHVDSNKNECNLFCLDCAGNAFC 61

Query: 65  PHCLSSHRSHKLLQIRRYVYHDVIRLDDAVKLIDCAFVQSYTTNSAKVVFLKQRPQTRNF 124
            +CL  H+ H+++QIRR  YH+V+R+++  K ID A VQ+Y  NSAK+VFL +RPQ R  
Sbjct: 62  SYCLVKHKDHRVVQIRRSSYHNVVRVNEIQKFIDIACVQTYIINSAKIVFLNERPQPRIG 121

Query: 125 RGSSGNLCSTCDRSLQDPYLFCSLSCKIDYLVKAQGGVSRHLLECNF 171
           +G + N C  C RSL D + FCSL CK+       GG+ R  L   F
Sbjct: 122 KGVT-NTCEICCRSLLDSFRFCSLGCKL-------GGMRRGDLSLTF 154

[Close]

BLAST of Carg13865 vs. TAIR 10
Match: AT1G32700.1 (PLATZ transcription factor family protein )

HSP 1 Score: 137.9 bits (346), Expect = 1.2e-32
Identity = 69/135 (51.11%), Postives = 87/135 (64.44%), Query Frame = 0


Query: 23  TVPIWLQALLSEKFFNACVVHEDAKKNEKNIFCFDCSLG-ICPHCLSSHRSHKLLQIRRY 82
           T P WL+ LL EKFF  C +H D+ K+E N++C DC+ G +C  CLS H+ H  +QIRR 
Sbjct: 10  TYPHWLKPLLREKFFVQCKLHADSHKSECNMYCLDCTNGPLCSLCLSFHKDHHAIQIRRS 69

Query: 83  VYHDVIRLDDAVKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQDP 142
            YHDVIR+ +  K +D   VQ+Y  NSAKVVFL +RPQ R  +G   N C  C RSL D 
Sbjct: 70  SYHDVIRVSEIQKFLDITGVQTYVINSAKVVFLNERPQPRPGKGVI-NTCEVCYRSLVDS 129

Query: 143 YLFCSLSCKIDYLVK 157
           + FCSL CKI  + K
Sbjct: 130 FRFCSLGCKISGISK 143

The following BLAST results are available for this feature:

BLAST of Carg13865 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7025963.1	1.2e-151	100.00	hypothetical protein SDJN02_12461, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6593617.1	7.9e-151	99.63	hypothetical protein SDJN03_13093, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023514505.1	2.4e-139	99.60	uncharacterized protein LOC111778763 [Cucurbita pepo subsp. pepo]	[more]
XP_022964357.1	4.1e-139	99.60	uncharacterized protein LOC111464390 [Cucurbita moschata]	[more]
XP_023000095.1	7.9e-135	96.80	uncharacterized protein LOC111494393 [Cucurbita maxima]	[more]

BLAST of Carg13865 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1G3Q4	4.6e-53	44.19	Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Carg13865 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HHL3	2.0e-139	99.60	uncharacterized protein LOC111464390 OS=Cucurbita moschata OX=3662 GN=LOC1114643...	[more]
A0A6J1KHE0	3.8e-135	96.80	uncharacterized protein LOC111494393 OS=Cucurbita maxima OX=3661 GN=LOC111494393...	[more]
A0A0A0KCM1	7.8e-120	86.35	B box-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G109690 ...	[more]
A0A1S3C8E3	5.6e-118	85.94	uncharacterized protein LOC103497663 OS=Cucumis melo OX=3656 GN=LOC103497663 PE=...	[more]
A0A6J1H7K0	3.3e-110	81.20	uncharacterized protein LOC111460295 OS=Cucurbita moschata OX=3662 GN=LOC1114602...	[more]

BLAST of Carg13865 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G60670.1	1.6e-72	57.37	PLATZ transcription factor family protein	[more]
AT2G12646.1	3.3e-54	44.19	PLATZ transcription factor family protein	[more]
AT1G31040.1	3.2e-49	59.18	PLATZ transcription factor family protein	[more]
AT1G21000.1	7.1e-33	43.11	PLATZ transcription factor family protein	[more]
AT1G32700.1	1.2e-32	51.11	PLATZ transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006734	PLATZ transcription factor	PFAM	PF04640	PLATZ	coord: 79..151 e-value: 1.2E-25 score: 89.9
None	No IPR available	PANTHER	PTHR31065	PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 25..271
None	No IPR available	PANTHER	PTHR31065:SF78	SUBFAMILY NOT NAMED	coord: 25..271
None	No IPR available	SUPERFAMILY	57845	B-box zinc-binding domain	coord: 38..83
IPR000315	B-box-type zinc finger	PROSITE	PS50119	ZF_BBOX	coord: 40..78 score: 9.299861

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg13865-RA	Carg13865-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008270	zinc ion binding