Carg13823 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg13823
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	C2H2-type zinc finger family protein
Location	Carg_Chr03: 4489658 .. 4490119 (+)
RNA-Seq Expression	Carg13823
Synteny	Carg13823

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACTCCAAACTATGCTGGAAGATATGGGAAAACAAGAACAAAAAGAAGAAGAATTTAACCACTACAATCAACGAAGCTTCATGGGAAGAACAAGCCTTTGCTGAGGATGCTGCTGCGGGTCATCTCGGCGGCTGCGTTTGGCCCCCCAGATCCTACTCTTGTAGCTTCTGCAAAAGGGAATTCCGGTCGGCTCAAGCTCTGGGTGGTCACATGAATGTCCACCGCCGTGATCGGGCTAGATTAAAGCACCAATCTTTCAAACCCCAAATCGATCCTCAACAACACCCTAAAACAAGCCATGATTTCCTCAAGGATCAGGCTGCTGTTTGTACCAAGAGAAAGAGACCCGATCATGTGCCGTCCACGGTGGCTTTCCTTTTCCGATCAGAGGTAATTGGACTTACTCATACCTCCGTTGAGGATTTGGATCTTGAGCTCCGCCTTGGCGGCGCTAGATAA

mRNA sequence

ATGGACTCCAAACTATGCTGGAAGATATGGGAAAACAAGAACAAAAAGAAGAAGAATTTAACCACTACAATCAACGAAGCTTCATGGGAAGAACAAGCCTTTGCTGAGGATGCTGCTGCGGGTCATCTCGGCGGCTGCGTTTGGCCCCCCAGATCCTACTCTTGTAGCTTCTGCAAAAGGGAATTCCGGTCGGCTCAAGCTCTGGGTGGTCACATGAATGTCCACCGCCGTGATCGGGCTAGATTAAAGCACCAATCTTTCAAACCCCAAATCGATCCTCAACAACACCCTAAAACAAGCCATGATTTCCTCAAGGATCAGGCTGCTGTTTGTACCAAGAGAAAGAGACCCGATCATGTGCCGTCCACGGTGGCTTTCCTTTTCCGATCAGAGGTAATTGGACTTACTCATACCTCCGTTGAGGATTTGGATCTTGAGCTCCGCCTTGGCGGCGCTAGATAA

Coding sequence (CDS)

ATGGACTCCAAACTATGCTGGAAGATATGGGAAAACAAGAACAAAAAGAAGAAGAATTTAACCACTACAATCAACGAAGCTTCATGGGAAGAACAAGCCTTTGCTGAGGATGCTGCTGCGGGTCATCTCGGCGGCTGCGTTTGGCCCCCCAGATCCTACTCTTGTAGCTTCTGCAAAAGGGAATTCCGGTCGGCTCAAGCTCTGGGTGGTCACATGAATGTCCACCGCCGTGATCGGGCTAGATTAAAGCACCAATCTTTCAAACCCCAAATCGATCCTCAACAACACCCTAAAACAAGCCATGATTTCCTCAAGGATCAGGCTGCTGTTTGTACCAAGAGAAAGAGACCCGATCATGTGCCGTCCACGGTGGCTTTCCTTTTCCGATCAGAGGTAATTGGACTTACTCATACCTCCGTTGAGGATTTGGATCTTGAGCTCCGCCTTGGCGGCGCTAGATAA

Protein sequence

MDSKLCWKIWENKNKKKKNLTTTINEASWEEQAFAEDAAAGHLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHQSFKPQIDPQQHPKTSHDFLKDQAAVCTKRKRPDHVPSTVAFLFRSEVIGLTHTSVEDLDLELRLGGAR

Homology

[Close]

BLAST of Carg13823 vs. NCBI nr
Match: KAG7033822.1 (putative transcriptional regulator RABBIT EARS, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 322.0 bits (824), Expect = 2.8e-84
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 1   MDSKLCWKIWENKNKKKKNLTTTINEASWEEQAFAEDAAAGHLGGCVWPPRSYSCSFCKR 60
           MDSKLCWKIWENKNKKKKNLTTTINEASWEEQAFAEDAAAGHLGGCVWPPRSYSCSFCKR
Sbjct: 1   MDSKLCWKIWENKNKKKKNLTTTINEASWEEQAFAEDAAAGHLGGCVWPPRSYSCSFCKR 60

Query: 61  EFRSAQALGGHMNVHRRDRARLKHQSFKPQIDPQQHPKTSHDFLKDQAAVCTKRKRPDHV 120
           EFRSAQALGGHMNVHRRDRARLKHQSFKPQIDPQQHPKTSHDFLKDQAAVCTKRKRPDHV
Sbjct: 61  EFRSAQALGGHMNVHRRDRARLKHQSFKPQIDPQQHPKTSHDFLKDQAAVCTKRKRPDHV 120

Query: 121 PSTVAFLFRSEVIGLTHTSVEDLDLELRLGGAR 154
           PSTVAFLFRSEVIGLTHTSVEDLDLELRLGGAR
Sbjct: 121 PSTVAFLFRSEVIGLTHTSVEDLDLELRLGGAR 153

[Close]

BLAST of Carg13823 vs. NCBI nr
Match: XP_022950470.1 (transcriptional regulator TAC1-like [Cucurbita moschata])

HSP 1 Score: 322.0 bits (824), Expect = 2.8e-84
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 1   MDSKLCWKIWENKNKKKKNLTTTINEASWEEQAFAEDAAAGHLGGCVWPPRSYSCSFCKR 60
           MDSKLCWKIWENKNKKKKNLTTTINEASWEEQAFAEDAAAGHLGGCVWPPRSYSCSFCKR
Sbjct: 3   MDSKLCWKIWENKNKKKKNLTTTINEASWEEQAFAEDAAAGHLGGCVWPPRSYSCSFCKR 62

Query: 61  EFRSAQALGGHMNVHRRDRARLKHQSFKPQIDPQQHPKTSHDFLKDQAAVCTKRKRPDHV 120
           EFRSAQALGGHMNVHRRDRARLKHQSFKPQIDPQQHPKTSHDFLKDQAAVCTKRKRPDHV
Sbjct: 63  EFRSAQALGGHMNVHRRDRARLKHQSFKPQIDPQQHPKTSHDFLKDQAAVCTKRKRPDHV 122

Query: 121 PSTVAFLFRSEVIGLTHTSVEDLDLELRLGGAR 154
           PSTVAFLFRSEVIGLTHTSVEDLDLELRLGGAR
Sbjct: 123 PSTVAFLFRSEVIGLTHTSVEDLDLELRLGGAR 155

[Close]

BLAST of Carg13823 vs. NCBI nr
Match: KAG6603640.1 (putative transcriptional regulator RABBIT EARS, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 318.2 bits (814), Expect = 4.0e-83
Identity = 152/153 (99.35%), Postives = 152/153 (99.35%), Query Frame = 0


Query: 1   MDSKLCWKIWENKNKKKKNLTTTINEASWEEQAFAEDAAAGHLGGCVWPPRSYSCSFCKR 60
           MDSKLCWKIWENKNKKKKNLTTTINEASWEEQAFAEDAAAGHLGGCVWPPRSYSCSFCKR
Sbjct: 3   MDSKLCWKIWENKNKKKKNLTTTINEASWEEQAFAEDAAAGHLGGCVWPPRSYSCSFCKR 62

Query: 61  EFRSAQALGGHMNVHRRDRARLKHQSFKPQIDPQQHPKTSHDFLKDQAAVCTKRKRPDHV 120
           EFRSAQALGGHMNVHRRDRARLKHQSFKPQID QQHPKTSHDFLKDQAAVCTKRKRPDHV
Sbjct: 63  EFRSAQALGGHMNVHRRDRARLKHQSFKPQIDLQQHPKTSHDFLKDQAAVCTKRKRPDHV 122

Query: 121 PSTVAFLFRSEVIGLTHTSVEDLDLELRLGGAR 154
           PSTVAFLFRSEVIGLTHTSVEDLDLELRLGGAR
Sbjct: 123 PSTVAFLFRSEVIGLTHTSVEDLDLELRLGGAR 155

[Close]

BLAST of Carg13823 vs. NCBI nr
Match: XP_023544692.1 (transcriptional regulator SUPERMAN-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 304.7 bits (779), Expect = 4.6e-79
Identity = 143/153 (93.46%), Postives = 150/153 (98.04%), Query Frame = 0


Query: 1   MDSKLCWKIWENKNKKKKNLTTTINEASWEEQAFAEDAAAGHLGGCVWPPRSYSCSFCKR 60
           MDSK CW +WENKNKKK+NLTT+IN+ASWEE+AFAEDAAAGHLGGCVWPPRSYSCSFCKR
Sbjct: 3   MDSKPCWMMWENKNKKKRNLTTSINQASWEEEAFAEDAAAGHLGGCVWPPRSYSCSFCKR 62

Query: 61  EFRSAQALGGHMNVHRRDRARLKHQSFKPQIDPQQHPKTSHDFLKDQAAVCTKRKRPDHV 120
           EFRSAQALGGHMNVHRRDRARLKHQSFKPQID QQHPKTSHDFLKDQAAVCTKRKRPDHV
Sbjct: 63  EFRSAQALGGHMNVHRRDRARLKHQSFKPQIDLQQHPKTSHDFLKDQAAVCTKRKRPDHV 122

Query: 121 PSTVAFLFRSEVIGLTHTSVEDLDLELRLGGAR 154
           P+T+AFLFRSEVIGLTHTSVEDLDLELRLGGAR
Sbjct: 123 PATLAFLFRSEVIGLTHTSVEDLDLELRLGGAR 155

[Close]

BLAST of Carg13823 vs. NCBI nr
Match: XP_004142197.1 (probable transcriptional regulator RABBIT EARS [Cucumis sativus] >KGN54274.1 hypothetical protein Csa_018178 [Cucumis sativus])

HSP 1 Score: 188.3 bits (477), Expect = 4.8e-44
Identity = 122/238 (51.26%), Postives = 135/238 (56.72%), Query Frame = 0


Query: 1   MDSKLCWKIWENKNKKKKNL------------TTTINEA-----SWEEQAFAEDAAAGHL 60
           M+ K CW +WE K KKKKNL            TTTI  +     SWEEQAFA+D AAG L
Sbjct: 1   MEPKRCWMMWE-KKKKKKNLITTSSDHHFLQATTTIKSSSSFDDSWEEQAFADD-AAGRL 60

Query: 61  GGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHQSFKPQID------PQQH- 120
           GGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKH+SFKPQI+      P  H 
Sbjct: 61  GGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESFKPQIETHLQIPPTLHQ 120

Query: 121 ------------PKTS-------------------------------------------- 154
                       PK+S                                            
Sbjct: 121 QVCDDNLVFSPNPKSSSSSFCLSTFPSQNLVESDLTPLTTTAATLHKWHQSSDLSQKTSD 180

[Close]

BLAST of Carg13823 vs. ExPASy Swiss-Prot
Match: Q9LHS9 (Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 GN=RBE PE=2 SV=2)

HSP 1 Score: 100.5 bits (249), Expect = 1.7e-20
Identity = 48/68 (70.59%), Postives = 51/68 (75.00%), Query Frame = 0


Query: 30 EEQAFAEDAAAGHLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHQSFKP 89
          EE+AFA     G  GGC+WPPRSYSCSFC REF+SAQALGGHMNVHRRDRARLK QS  P
Sbjct: 32 EERAFASAEEYGGGGGCMWPPRSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQQSLSP 91

Query: 90 QIDPQQHP 98
              Q  P
Sbjct: 92 SSTDQATP 99

[Close]

BLAST of Carg13823 vs. ExPASy Swiss-Prot
Match: O80942 (Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.1e-19
Identity = 51/75 (68.00%), Postives = 56/75 (74.67%), Query Frame = 0


Query: 26  EASWEEQAFAEDAAAGHLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHQ 85
           E+SWEE AFAED AAG L    WPPRSY+CSFC+REF+SAQALGGHMNVHRRDRARLK  
Sbjct: 16  ESSWEELAFAEDDAAGSL----WPPRSYTCSFCRREFKSAQALGGHMNVHRRDRARLKQA 75

Query: 86  SFKPQIDPQQHPKTS 101
                 D    PK+S
Sbjct: 76  D-----DQYLFPKSS 81

[Close]

BLAST of Carg13823 vs. ExPASy Swiss-Prot
Match: Q38895 (Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 8.2e-15
Identity = 45/87 (51.72%), Postives = 53/87 (60.92%), Query Frame = 0


Query: 42  HLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHQ----SFKPQIDPQQHP 101
           +L G  WPPRSY+CSFCKREFRSAQALGGHMNVHRRDRARL+ Q    S      P  +P
Sbjct: 36  YLLGFSWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQSPSSSSTPSPPYPNP 95

Query: 102 KTSHDFLKDQAAVCTKRKRPDHVPSTV 125
             S+  + +          P H P T+
Sbjct: 96  NYSYSTMANSPP-------PHHSPLTL 115

[Close]

BLAST of Carg13823 vs. ExPASy Swiss-Prot
Match: Q9SLB8 (Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 7.7e-13
Identity = 30/36 (83.33%), Postives = 36/36 (100.00%), Query Frame = 0


Query: 48 WPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLK 84
          WPP++Y+CSFC+REFRSAQALGGHMNVHRRDRA+L+
Sbjct: 44 WPPKNYTCSFCRREFRSAQALGGHMNVHRRDRAKLR 79

[Close]

BLAST of Carg13823 vs. ExPASy Swiss-Prot
Match: Q9SR34 (Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 5.7e-08
Identity = 45/137 (32.85%), Postives = 58/137 (42.34%), Query Frame = 0


Query: 51  RSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHQSFKPQ-------------------- 110
           RSY CSFC R F +AQALGGHMN+HRRDRA+L+ +  +                      
Sbjct: 33  RSYVCSFCIRGFSNAQALGGHMNIHRRDRAKLRQKLMEDNKDDVVAESDASEVVSLDLNE 92

Query: 111 -----------------IDPQQHPKTSHDFLKDQAAVCTKRKRPDHVPSTVAFLFRSEVI 151
                            +D    PK   +F   ++ + T     DH   T A +  S   
Sbjct: 93  QQQQQGEALTCDDHDQYVDNDISPKQKLEFWVQESKLDTN----DHGKVTEASIDGSS-- 152

[Close]

BLAST of Carg13823 vs. ExPASy TrEMBL
Match: A0A6J1GFU1 (transcriptional regulator TAC1-like OS=Cucurbita moschata OX=3662 GN=LOC111453565 PE=4 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 1.3e-84
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 1   MDSKLCWKIWENKNKKKKNLTTTINEASWEEQAFAEDAAAGHLGGCVWPPRSYSCSFCKR 60
           MDSKLCWKIWENKNKKKKNLTTTINEASWEEQAFAEDAAAGHLGGCVWPPRSYSCSFCKR
Sbjct: 3   MDSKLCWKIWENKNKKKKNLTTTINEASWEEQAFAEDAAAGHLGGCVWPPRSYSCSFCKR 62

Query: 61  EFRSAQALGGHMNVHRRDRARLKHQSFKPQIDPQQHPKTSHDFLKDQAAVCTKRKRPDHV 120
           EFRSAQALGGHMNVHRRDRARLKHQSFKPQIDPQQHPKTSHDFLKDQAAVCTKRKRPDHV
Sbjct: 63  EFRSAQALGGHMNVHRRDRARLKHQSFKPQIDPQQHPKTSHDFLKDQAAVCTKRKRPDHV 122

Query: 121 PSTVAFLFRSEVIGLTHTSVEDLDLELRLGGAR 154
           PSTVAFLFRSEVIGLTHTSVEDLDLELRLGGAR
Sbjct: 123 PSTVAFLFRSEVIGLTHTSVEDLDLELRLGGAR 155

[Close]

BLAST of Carg13823 vs. ExPASy TrEMBL
Match: A0A0A0KZM8 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G296275 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 2.3e-44
Identity = 122/238 (51.26%), Postives = 135/238 (56.72%), Query Frame = 0


Query: 1   MDSKLCWKIWENKNKKKKNL------------TTTINEA-----SWEEQAFAEDAAAGHL 60
           M+ K CW +WE K KKKKNL            TTTI  +     SWEEQAFA+D AAG L
Sbjct: 1   MEPKRCWMMWE-KKKKKKNLITTSSDHHFLQATTTIKSSSSFDDSWEEQAFADD-AAGRL 60

Query: 61  GGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHQSFKPQID------PQQH- 120
           GGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKH+SFKPQI+      P  H 
Sbjct: 61  GGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESFKPQIETHLQIPPTLHQ 120

Query: 121 ------------PKTS-------------------------------------------- 154
                       PK+S                                            
Sbjct: 121 QVCDDNLVFSPNPKSSSSSFCLSTFPSQNLVESDLTPLTTTAATLHKWHQSSDLSQKTSD 180

[Close]

BLAST of Carg13823 vs. ExPASy TrEMBL
Match: A0A1S3BJY1 (probable transcriptional regulator RABBIT EARS OS=Cucumis melo OX=3656 GN=LOC103490450 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 3.9e-44
Identity = 121/239 (50.63%), Postives = 133/239 (55.65%), Query Frame = 0


Query: 1   MDSKLCWKIWENKNKKKKNL-------------TTTINEA------SWEEQAFAEDAAAG 60
           M+ K CW +WE K KKKKNL             TTTI  +      SWEEQAFA+D AAG
Sbjct: 1   MEPKRCWMMWE-KKKKKKNLITTSSDHHFLQATTTTIKSSSSSFDDSWEEQAFADD-AAG 60

Query: 61  HLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHQSFKPQIDP-------- 120
            LGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKH+SFKPQI+         
Sbjct: 61  RLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESFKPQIETHLQIPPTL 120

Query: 121 -----------QQHPKTS------------------------------------------ 154
                        +PK+S                                          
Sbjct: 121 QQQVCDDNLVFNPNPKSSSSFCLSTFPSQNLVESDLTPLTTTTATLHKWHQSSDLSQKTS 180

[Close]

BLAST of Carg13823 vs. ExPASy TrEMBL
Match: A0A5A7STW0 (Putative transcriptional regulator RABBIT EARS OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G00660 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 3.9e-44
Identity = 121/239 (50.63%), Postives = 133/239 (55.65%), Query Frame = 0


Query: 1   MDSKLCWKIWENKNKKKKNL-------------TTTINEA------SWEEQAFAEDAAAG 60
           M+ K CW +WE K KKKKNL             TTTI  +      SWEEQAFA+D AAG
Sbjct: 1   MEPKRCWMMWE-KKKKKKNLITTSSDHHFLQATTTTIKSSSSSFDDSWEEQAFADD-AAG 60

Query: 61  HLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHQSFKPQIDP-------- 120
            LGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKH+SFKPQI+         
Sbjct: 61  RLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESFKPQIETHLQIPPTL 120

Query: 121 -----------QQHPKTS------------------------------------------ 154
                        +PK+S                                          
Sbjct: 121 QQQVCDDNLVFNPNPKSSSSFCLSTFPSQNLVESDLTPLTTTTATLHKWHQSSDLSQKTS 180

[Close]

BLAST of Carg13823 vs. ExPASy TrEMBL
Match: A0A6J1EUY7 (transcriptional regulator SUPERMAN-like OS=Cucurbita moschata OX=3662 GN=LOC111438197 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 3.7e-42
Identity = 111/218 (50.92%), Postives = 124/218 (56.88%), Query Frame = 0


Query: 1   MDSKLCWKIWENKNK---KKKNLTTTIN----------EASWEEQAFAEDAAAGHLGGCV 60
           M+ K CW +WENKN+   K +N  TT +          + SWEEQAFA+D AAG LGGCV
Sbjct: 3   MEPKPCWMMWENKNQNENKNENRLTTASDHLNNKASSFDDSWEEQAFADD-AAGRLGGCV 62

Query: 61  WPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHQSFKPQ----------------- 120
           WPPR YSCSFCKREFRSAQALGGHMNVHRRDRA LKH+SFKPQ                 
Sbjct: 63  WPPRFYSCSFCKREFRSAQALGGHMNVHRRDRAMLKHESFKPQIETHLQIPPKNNPFTSL 122

Query: 121 IDPQQHPKT-------------------------------------SHDFLKDQAAVCTK 151
           ID  QHP +                                     + D  KD  AVC K
Sbjct: 123 IDLPQHPSSQFVCDENLAFNPNPKSSQNSVDESDHKWRQSLDLSIKTTDLFKDD-AVCCK 182

[Close]

BLAST of Carg13823 vs. TAIR 10
Match: AT5G06070.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 100.5 bits (249), Expect = 1.2e-21
Identity = 48/68 (70.59%), Postives = 51/68 (75.00%), Query Frame = 0


Query: 30 EEQAFAEDAAAGHLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHQSFKP 89
          EE+AFA     G  GGC+WPPRSYSCSFC REF+SAQALGGHMNVHRRDRARLK QS  P
Sbjct: 32 EERAFASAEEYGGGGGCMWPPRSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQQSLSP 91

Query: 90 QIDPQQHP 98
              Q  P
Sbjct: 92 SSTDQATP 99

[Close]

BLAST of Carg13823 vs. TAIR 10
Match: AT2G37740.1 (zinc-finger protein 10 )

HSP 1 Score: 97.8 bits (242), Expect = 7.9e-21
Identity = 51/75 (68.00%), Postives = 56/75 (74.67%), Query Frame = 0


Query: 26  EASWEEQAFAEDAAAGHLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHQ 85
           E+SWEE AFAED AAG L    WPPRSY+CSFC+REF+SAQALGGHMNVHRRDRARLK  
Sbjct: 16  ESSWEELAFAEDDAAGSL----WPPRSYTCSFCRREFKSAQALGGHMNVHRRDRARLKQA 75

Query: 86  SFKPQIDPQQHPKTS 101
                 D    PK+S
Sbjct: 76  D-----DQYLFPKSS 81

[Close]

BLAST of Carg13823 vs. TAIR 10
Match: AT4G17810.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 88.2 bits (217), Expect = 6.2e-18
Identity = 38/56 (67.86%), Postives = 47/56 (83.93%), Query Frame = 0


Query: 25 NEASWEEQAFAEDAAAGHLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRA 81
          ++ SWE +AF +D   G++ G  WPPRSY+C+FC+REFRSAQALGGHMNVHRRDRA
Sbjct: 19 DDESWEVKAFEQD-TKGNISGTTWPPRSYTCNFCRREFRSAQALGGHMNVHRRDRA 73

[Close]

BLAST of Carg13823 vs. TAIR 10
Match: AT3G23130.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 81.6 bits (200), Expect = 5.8e-16
Identity = 45/87 (51.72%), Postives = 53/87 (60.92%), Query Frame = 0


Query: 42  HLGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHQ----SFKPQIDPQQHP 101
           +L G  WPPRSY+CSFCKREFRSAQALGGHMNVHRRDRARL+ Q    S      P  +P
Sbjct: 36  YLLGFSWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQSPSSSSTPSPPYPNP 95

Query: 102 KTSHDFLKDQAAVCTKRKRPDHVPSTV 125
             S+  + +          P H P T+
Sbjct: 96  NYSYSTMANSPP-------PHHSPLTL 115

[Close]

BLAST of Carg13823 vs. TAIR 10
Match: AT2G42410.1 (zinc finger protein 11 )

HSP 1 Score: 75.1 bits (183), Expect = 5.5e-14
Identity = 30/36 (83.33%), Postives = 36/36 (100.00%), Query Frame = 0


Query: 48 WPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLK 84
          WPP++Y+CSFC+REFRSAQALGGHMNVHRRDRA+L+
Sbjct: 44 WPPKNYTCSFCRREFRSAQALGGHMNVHRRDRAKLR 79

The following BLAST results are available for this feature:

BLAST of Carg13823 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7033822.1	2.8e-84	100.00	putative transcriptional regulator RABBIT EARS, partial [Cucurbita argyrosperma ...	[more]
XP_022950470.1	2.8e-84	100.00	transcriptional regulator TAC1-like [Cucurbita moschata]	[more]
KAG6603640.1	4.0e-83	99.35	putative transcriptional regulator RABBIT EARS, partial [Cucurbita argyrosperma ...	[more]
XP_023544692.1	4.6e-79	93.46	transcriptional regulator SUPERMAN-like [Cucurbita pepo subsp. pepo]	[more]
XP_004142197.1	4.8e-44	51.26	probable transcriptional regulator RABBIT EARS [Cucumis sativus] >KGN54274.1 hyp...	[more]

BLAST of Carg13823 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LHS9	1.7e-20	70.59	Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 G...	[more]
O80942	1.1e-19	68.00	Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1	[more]
Q38895	8.2e-15	51.72	Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 S...	[more]
Q9SLB8	7.7e-13	83.33	Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1	[more]
Q9SR34	5.7e-08	32.85	Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1	[more]

BLAST of Carg13823 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GFU1	1.3e-84	100.00	transcriptional regulator TAC1-like OS=Cucurbita moschata OX=3662 GN=LOC11145356...	[more]
A0A0A0KZM8	2.3e-44	51.26	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G296275 P...	[more]
A0A1S3BJY1	3.9e-44	50.63	probable transcriptional regulator RABBIT EARS OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A5A7STW0	3.9e-44	50.63	Putative transcriptional regulator RABBIT EARS OS=Cucumis melo var. makuwa OX=11...	[more]
A0A6J1EUY7	3.7e-42	50.92	transcriptional regulator SUPERMAN-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]

BLAST of Carg13823 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06070.1	1.2e-21	70.59	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT2G37740.1	7.9e-21	68.00	zinc-finger protein 10	[more]
AT4G17810.1	6.2e-18	67.86	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT3G23130.1	5.8e-16	51.72	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT2G42410.1	5.5e-14	83.33	zinc finger protein 11	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013087	Zinc finger C2H2-type	SMART	SM00355	c2h2final6	coord: 53..75 e-value: 0.006 score: 25.8
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 55..75
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 53..80 score: 11.239817
None	No IPR available	PFAM	PF13912	zf-C2H2_6	coord: 53..77 e-value: 5.5E-7 score: 29.4
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 49..113 e-value: 9.4E-7 score: 30.6
None	No IPR available	PANTHER	PTHR45801	OS07G0101800 PROTEIN	coord: 6..116
None	No IPR available	PANTHER	PTHR45801:SF68	CHAIN A, NMR STRUCTURE OF THE SINGLE QALGGH ZINC FINGER DOMAIN FROM ARABIDOPSIS THALIANA SUPERMAN PROTEIN	coord: 6..116
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 50..79

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg13823-RA	Carg13823-RA	mRNA