Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTAATGAGTTTTTTGTTACACTCTTATCAGGTTTGGTGTATGGAAAATTGTATGGTATCACAAGGAATGTTCTAAAGACAGACATTGTCAATTTGCTTGAAGGATGTAATTTGAGTTTGGATGATGTCAAAGTTGAATACAACCGGAGTTTCACGCCAACCTCTATGTAATGTTCTTCTCTTGCTTATTTTGAATATAGATGCTTTCTGTATTAGGTTTTACCATCGTTGTTATGGTTCTATTCCTACTGCATCTTGGAAGCTAAAATAATCAAAGAATATCTAATTGCCCTTTTGATCCTTAAAGCATTAATACAAATGCAGTCCTTAAGCCTGGATTATTAGCTACATGTTAATCTATGGAATATGTGTTCAATTAAGCGCGTTGTACCTTTCTGTAAAAGGGTTAGCCTGGATTATTAGCTTCATGTTAATCTATGGAATATGCGTTCAATTAAGCGCGTTGTACCTTTCTGTAAAAGGGTTATATTTCTAAGGAGAAACCCAATTGTGTAACGTTTATGGATGTTGAGTAACACTGGTGTTCGAGGTTGGTTTTCGTTAAATATTTATGGATGTTGTAATCAGGATGATGCAATTCCCCTCCCGGAAGGCCTATGATAATGCTTTTCGAGTGATTGGAAGAAGAGGTCGCATGTACAGATTGGAGCGGGTGATGTTCTGATGGATATCTAACAAAAAATAGATTTATTTTTTTGTCTTGTTTTAAAATTTAGAAACCTATTAACTTCTATTCTAAATTTCAGGCTGATCGTTCTCAGTGGGACCTTCTTTCACCTTACAATGGAAAAACTGTAATGCCATTTTTTTTAAATTATGAACTTATTGTCCATTGAGAAATCTCTTTACCATTCATATTCTTGTTTTTGTTATTGGCATCTTTGATCAGAAAGCTATCCATTCTACTTTATATTTGTTTATCTAATATCATATGCTCGAATGGCATGGTTTCGAGGATCAAGCATACATATCAATAAGTTCTCTGCTATTCTACTGCATGATGGTTAATTTCAATGGATTGTTCCTTACATCTCCAAATTTAAAACTGATTATAGAGAAACTACTTTTTCATGTTAAACTGTTTAGAAGGGAGTAAGAAAAATGTTAGCCAAGGTCCTTGGTCTGGATCCCCCTTTAGTAGCTTCTCGAGGATATAAAACTGTTGTAACGACTTCAACTTAGAAGATTAAGGGTTTTTATTATAAGATCGTTTATAATGAAAAGATAACATGCACTGATGTGATTAGATTTTCAATTGAAACTTGATATTGCAAGATTAAGAATTGGCTATCTTTCTGGTCGTAAGTTTGTTGTTAGTAAAATCATGTGCAACTTATTGTGCAGACTGCAGTTAATAGGTGTCTCATATTAAATTTAAGCCTCTCAACATTGGATTGGTTTGGACTTTTTTCCTGTGGGATTAAATTTTCTTTGTACATACAGATCCTTCTGCAAGGAATACCTCGAAATGCAGCGCTAGATGACGTGGAGCGCTTCTTATCTGGCTGTGACTATGATGCAACCTCAATCAATATGTTTTTCAGGTAGAGATCAATTATTTGTACCAAAGTTTCATACATCAATGAAAAAAAGTAATAATAGTAAAAAAAAAAAAAAAAAAGTTCAGAATTAATATTGTAGTACTTGTAGGAATTCTGTGTGATGCATCATTTGTACATCATTGCAGGGCATCCATTCCAGAGCCCATCAGAATGGCAACAGTGCTGTTCCCTTCACCAACACAAGCAATGCATGCATTTCTTACTAAGAACAGAGGCTTTTGTCTGAACAACCAAATTTTGATGCGGGTTCTCCAATAA
mRNA sequence
ATGCCTAATGAGTTTTTTGTTACACTCTTATCAGGTTTGGTGTATGGAAAATTGTATGGTATCACAAGGAATGTTCTAAAGACAGACATTGTCAATTTGCTTGAAGGATGTAATTTGAGTTTGGATGATGTCAAAGTTGAATACAACCGGAGTTTCACGCCAACCTCTATGATGATGCAATTCCCCTCCCGGAAGGCCTATGATAATGCTTTTCGAGTGATTGGAAGAAGAGGTCGCATGTACAGATTGGAGCGGGCTGATCGTTCTCAGTGGGACCTTCTTTCACCTTACAATGGAAAAACTATCCTTCTGCAAGGAATACCTCGAAATGCAGCGCTAGATGACGTGGAGCGCTTCTTATCTGGCTGTGACTATGATGCAACCTCAATCAATATGTTTTTCAGGGCATCCATTCCAGAGCCCATCAGAATGGCAACAGTGCTGTTCCCTTCACCAACACAAGCAATGCATGCATTTCTTACTAAGAACAGAGGCTTTTGTCTGAACAACCAAATTTTGATGCGGGTTCTCCAATAA
Coding sequence (CDS)
ATGCCTAATGAGTTTTTTGTTACACTCTTATCAGGTTTGGTGTATGGAAAATTGTATGGTATCACAAGGAATGTTCTAAAGACAGACATTGTCAATTTGCTTGAAGGATGTAATTTGAGTTTGGATGATGTCAAAGTTGAATACAACCGGAGTTTCACGCCAACCTCTATGATGATGCAATTCCCCTCCCGGAAGGCCTATGATAATGCTTTTCGAGTGATTGGAAGAAGAGGTCGCATGTACAGATTGGAGCGGGCTGATCGTTCTCAGTGGGACCTTCTTTCACCTTACAATGGAAAAACTATCCTTCTGCAAGGAATACCTCGAAATGCAGCGCTAGATGACGTGGAGCGCTTCTTATCTGGCTGTGACTATGATGCAACCTCAATCAATATGTTTTTCAGGGCATCCATTCCAGAGCCCATCAGAATGGCAACAGTGCTGTTCCCTTCACCAACACAAGCAATGCATGCATTTCTTACTAAGAACAGAGGCTTTTGTCTGAACAACCAAATTTTGATGCGGGTTCTCCAATAA
Protein sequence
MPNEFFVTLLSGLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKAYDNAFRVIGRRGRMYRLERADRSQWDLLSPYNGKTILLQGIPRNAALDDVERFLSGCDYDATSINMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ
Homology
BLAST of Carg13778 vs. NCBI nr
Match:
KAG7033867.1 (hypothetical protein SDJN02_03592, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 363.6 bits (932), Expect = 9.6e-97
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0
Query: 1 MPNEFFVTLLSGLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQ 60
MPNEFFVTLLSGLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQ
Sbjct: 1 MPNEFFVTLLSGLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQ 60
Query: 61 FPSRKAYDNAFRVIGRRGRMYRLERADRSQWDLLSPYNGKTILLQGIPRNAALDDVERFL 120
FPSRKAYDNAFRVIGRRGRMYRLERADRSQWDLLSPYNGKTILLQGIPRNAALDDVERFL
Sbjct: 61 FPSRKAYDNAFRVIGRRGRMYRLERADRSQWDLLSPYNGKTILLQGIPRNAALDDVERFL 120
Query: 121 SGCDYDATSINMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 179
SGCDYDATSINMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ
Sbjct: 121 SGCDYDATSINMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 178
BLAST of Carg13778 vs. NCBI nr
Match:
XP_023544682.1 (uncharacterized protein LOC111804194 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 342.0 bits (876), Expect = 3.0e-90
Identity = 166/168 (98.81%), Postives = 168/168 (100.00%), Query Frame = 0
Query: 11 SGLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKAYDNA 70
+GLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKAYDNA
Sbjct: 60 TGLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKAYDNA 119
Query: 71 FRVIGRRGRMYRLERADRSQWDLLSPYNGKTILLQGIPRNAALDDVERFLSGCDYDATSI 130
FRVIGRRGRMYRLERADRSQWDLLSPYNGKT+LLQGIPRNAALDDVERFLSGCDYDATSI
Sbjct: 120 FRVIGRRGRMYRLERADRSQWDLLSPYNGKTVLLQGIPRNAALDDVERFLSGCDYDATSI 179
Query: 131 NMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 179
NMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ
Sbjct: 180 NMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 227
BLAST of Carg13778 vs. NCBI nr
Match:
KAG6603690.1 (hypothetical protein SDJN03_04299, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 339.3 bits (869), Expect = 1.9e-89
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0
Query: 13 LVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKAYDNAFR 72
LVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKAYDNAFR
Sbjct: 9 LVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKAYDNAFR 68
Query: 73 VIGRRGRMYRLERADRSQWDLLSPYNGKTILLQGIPRNAALDDVERFLSGCDYDATSINM 132
VIGRRGRMYRLERADRSQWDLLSPYNGKTILLQGIPRNAALDDVERFLSGCDYDATSINM
Sbjct: 69 VIGRRGRMYRLERADRSQWDLLSPYNGKTILLQGIPRNAALDDVERFLSGCDYDATSINM 128
Query: 133 FFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 179
FFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ
Sbjct: 129 FFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 174
BLAST of Carg13778 vs. NCBI nr
Match:
XP_022977775.1 (uncharacterized protein LOC111477976 [Cucurbita maxima])
HSP 1 Score: 338.6 bits (867), Expect = 3.3e-89
Identity = 167/177 (94.35%), Postives = 171/177 (96.61%), Query Frame = 0
Query: 3 NEFFVTL-LSGLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQF 62
N F TL +GLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQF
Sbjct: 51 NSFLDTLETAGLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQF 110
Query: 63 PSRKAYDNAFRVIGRRGRMYRLERADRSQWDLLSPYNGKTILLQGIPRNAALDDVERFLS 122
PSRK+YDNAFRVIGRRGR+YRLERADRSQWDLLSPYNGKT+LLQGIPRNAALDDVERFLS
Sbjct: 111 PSRKSYDNAFRVIGRRGRIYRLERADRSQWDLLSPYNGKTVLLQGIPRNAALDDVERFLS 170
Query: 123 GCDYDATSINMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 179
GCDYDAT INMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ
Sbjct: 171 GCDYDATLINMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 227
BLAST of Carg13778 vs. NCBI nr
Match:
XP_022949855.1 (uncharacterized protein LOC111453126 [Cucurbita moschata])
HSP 1 Score: 337.0 bits (863), Expect = 9.6e-89
Identity = 165/168 (98.21%), Postives = 166/168 (98.81%), Query Frame = 0
Query: 11 SGLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKAYDNA 70
+GLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPS KAYDNA
Sbjct: 60 AGLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSWKAYDNA 119
Query: 71 FRVIGRRGRMYRLERADRSQWDLLSPYNGKTILLQGIPRNAALDDVERFLSGCDYDATSI 130
FRVIGRRGRMYRLERADRSQWDLLSPYNGK ILLQGIPRNAALDDVERFLSGCDYDATSI
Sbjct: 120 FRVIGRRGRMYRLERADRSQWDLLSPYNGKIILLQGIPRNAALDDVERFLSGCDYDATSI 179
Query: 131 NMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 179
NMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ
Sbjct: 180 NMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 227
BLAST of Carg13778 vs. ExPASy TrEMBL
Match:
A0A6J1INA4 (uncharacterized protein LOC111477976 OS=Cucurbita maxima OX=3661 GN=LOC111477976 PE=4 SV=1)
HSP 1 Score: 338.6 bits (867), Expect = 1.6e-89
Identity = 167/177 (94.35%), Postives = 171/177 (96.61%), Query Frame = 0
Query: 3 NEFFVTL-LSGLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQF 62
N F TL +GLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQF
Sbjct: 51 NSFLDTLETAGLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQF 110
Query: 63 PSRKAYDNAFRVIGRRGRMYRLERADRSQWDLLSPYNGKTILLQGIPRNAALDDVERFLS 122
PSRK+YDNAFRVIGRRGR+YRLERADRSQWDLLSPYNGKT+LLQGIPRNAALDDVERFLS
Sbjct: 111 PSRKSYDNAFRVIGRRGRIYRLERADRSQWDLLSPYNGKTVLLQGIPRNAALDDVERFLS 170
Query: 123 GCDYDATSINMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 179
GCDYDAT INMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ
Sbjct: 171 GCDYDATLINMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 227
BLAST of Carg13778 vs. ExPASy TrEMBL
Match:
A0A6J1GDZ1 (uncharacterized protein LOC111453126 OS=Cucurbita moschata OX=3662 GN=LOC111453126 PE=4 SV=1)
HSP 1 Score: 337.0 bits (863), Expect = 4.7e-89
Identity = 165/168 (98.21%), Postives = 166/168 (98.81%), Query Frame = 0
Query: 11 SGLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKAYDNA 70
+GLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPS KAYDNA
Sbjct: 60 AGLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSWKAYDNA 119
Query: 71 FRVIGRRGRMYRLERADRSQWDLLSPYNGKTILLQGIPRNAALDDVERFLSGCDYDATSI 130
FRVIGRRGRMYRLERADRSQWDLLSPYNGK ILLQGIPRNAALDDVERFLSGCDYDATSI
Sbjct: 120 FRVIGRRGRMYRLERADRSQWDLLSPYNGKIILLQGIPRNAALDDVERFLSGCDYDATSI 179
Query: 131 NMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 179
NMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ
Sbjct: 180 NMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 227
BLAST of Carg13778 vs. ExPASy TrEMBL
Match:
A0A6J1I6U3 (uncharacterized protein LOC111471264 OS=Cucurbita maxima OX=3661 GN=LOC111471264 PE=4 SV=1)
HSP 1 Score: 325.1 bits (832), Expect = 1.8e-85
Identity = 154/168 (91.67%), Postives = 164/168 (97.62%), Query Frame = 0
Query: 11 SGLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKAYDNA 70
+GLVYGKLYGITRN LKTDIVNLLEGCNL+LDDVKVEYNRSFTPTSMMMQFPSR+AYDNA
Sbjct: 60 AGLVYGKLYGITRNTLKTDIVNLLEGCNLNLDDVKVEYNRSFTPTSMMMQFPSRQAYDNA 119
Query: 71 FRVIGRRGRMYRLERADRSQWDLLSPYNGKTILLQGIPRNAALDDVERFLSGCDYDATSI 130
FRVIGR+GR+YRLERADRSQWD+LSPYNGKT+LLQGIPRNA ++DVERFL GCDYDATSI
Sbjct: 120 FRVIGRKGRLYRLERADRSQWDILSPYNGKTVLLQGIPRNALVEDVERFLLGCDYDATSI 179
Query: 131 NMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 179
NMFFRAS PEP+RMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ
Sbjct: 180 NMFFRASFPEPMRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 227
BLAST of Carg13778 vs. ExPASy TrEMBL
Match:
A0A6J1CQY2 (uncharacterized protein LOC111013764 OS=Momordica charantia OX=3673 GN=LOC111013764 PE=4 SV=1)
HSP 1 Score: 323.2 bits (827), Expect = 7.0e-85
Identity = 154/176 (87.50%), Postives = 166/176 (94.32%), Query Frame = 0
Query: 3 NEFFVTLLSGLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFP 62
+ F T +GLVYGKLYGITRN LKTDIVNLLEGCNL LDDVKV+YNRSFTPTSMMMQFP
Sbjct: 53 DSFLDTSKTGLVYGKLYGITRNTLKTDIVNLLEGCNLGLDDVKVDYNRSFTPTSMMMQFP 112
Query: 63 SRKAYDNAFRVIGRRGRMYRLERADRSQWDLLSPYNGKTILLQGIPRNAALDDVERFLSG 122
SR+AYDNA RVIGR+GR+YRLERADRSQWDLLSPYNGKT+LLQG+PRNA +DVERFLSG
Sbjct: 113 SRQAYDNAIRVIGRKGRLYRLERADRSQWDLLSPYNGKTVLLQGLPRNAMQEDVERFLSG 172
Query: 123 CDYDATSINMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 179
C+YDATSINMFFRAS+PEP+RMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ
Sbjct: 173 CNYDATSINMFFRASVPEPMRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 228
BLAST of Carg13778 vs. ExPASy TrEMBL
Match:
A0A6J1HGY5 (uncharacterized protein LOC111463377 OS=Cucurbita moschata OX=3662 GN=LOC111463377 PE=4 SV=1)
HSP 1 Score: 318.5 bits (815), Expect = 1.7e-83
Identity = 151/168 (89.88%), Postives = 163/168 (97.02%), Query Frame = 0
Query: 11 SGLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKAYDNA 70
+GLVYGKL GITRN LKTDIVNLLEGCNL+LDDVKVEYNRSFTPTSMMMQFPSR+AYDNA
Sbjct: 60 AGLVYGKLSGITRNTLKTDIVNLLEGCNLNLDDVKVEYNRSFTPTSMMMQFPSRQAYDNA 119
Query: 71 FRVIGRRGRMYRLERADRSQWDLLSPYNGKTILLQGIPRNAALDDVERFLSGCDYDATSI 130
FRVIGR+GR+YRLERADRSQWD+LSPY+GKT+LLQGIPRNA ++DVERFL GCDYDATSI
Sbjct: 120 FRVIGRKGRLYRLERADRSQWDILSPYSGKTVLLQGIPRNALVEDVERFLLGCDYDATSI 179
Query: 131 NMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 179
NMFFRAS PEP+R+ATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ
Sbjct: 180 NMFFRASFPEPMRLATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 227
BLAST of Carg13778 vs. TAIR 10
Match:
AT5G02740.1 (Ribosomal protein S24e family protein )
HSP 1 Score: 173.3 bits (438), Expect = 1.7e-43
Identity = 85/169 (50.30%), Postives = 115/169 (68.05%), Query Frame = 0
Query: 12 GLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNR--SFTPTSMMMQFPSRKAYDN 71
G YGK G +++ LKTDI+N+LEGC+L+ DD+K Y R + TP ++ +QFPS AYD
Sbjct: 60 GRFYGKFSGFSKHALKTDIMNVLEGCSLTSDDLKFNYPRGGNLTPAAVFVQFPSLSAYDK 119
Query: 72 AFRVIGRRGRMYRLERADRSQWDLLSPYNGKTILLQGIPRNAALDDVERFLSGCDYDATS 131
A R I ++G++YRLE+A R+QWD + PY GK + L GIP NA DD++RFLSGC Y S
Sbjct: 120 ALRNIAKKGKLYRLEKAARAQWDPIVPYEGKVVALHGIPVNAITDDIDRFLSGCLYYPGS 179
Query: 132 INMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 179
I + R+A V F S TQAM+A++TKNR F LN +I ++VLQ
Sbjct: 180 IQFLTVQGLGTSKRVALVRFTSQTQAMNAYITKNRNFLLNQRITLQVLQ 228
BLAST of Carg13778 vs. TAIR 10
Match:
AT5G02740.2 (Ribosomal protein S24e family protein )
HSP 1 Score: 137.5 bits (345), Expect = 1.0e-32
Identity = 64/121 (52.89%), Postives = 86/121 (71.07%), Query Frame = 0
Query: 12 GLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNR--SFTPTSMMMQFPSRKAYDN 71
G YGK G +++ LKTDI+N+LEGC+L+ DD+K Y R + TP ++ +QFPS AYD
Sbjct: 60 GRFYGKFSGFSKHALKTDIMNVLEGCSLTSDDLKFNYPRGGNLTPAAVFVQFPSLSAYDK 119
Query: 72 AFRVIGRRGRMYRLERADRSQWDLLSPYNGKTILLQGIPRNAALDDVERFLSGCDYDATS 131
A R I ++G++YRLE+A R+QWD + PY GK + L GIP NA DD++RFLSGC Y S
Sbjct: 120 ALRNIAKKGKLYRLEKAARAQWDPIVPYEGKVVALHGIPVNAITDDIDRFLSGCLYYPGS 179
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7033867.1 | 9.6e-97 | 100.00 | hypothetical protein SDJN02_03592, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_023544682.1 | 3.0e-90 | 98.81 | uncharacterized protein LOC111804194 [Cucurbita pepo subsp. pepo] | [more] |
KAG6603690.1 | 1.9e-89 | 100.00 | hypothetical protein SDJN03_04299, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022977775.1 | 3.3e-89 | 94.35 | uncharacterized protein LOC111477976 [Cucurbita maxima] | [more] |
XP_022949855.1 | 9.6e-89 | 98.21 | uncharacterized protein LOC111453126 [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1INA4 | 1.6e-89 | 94.35 | uncharacterized protein LOC111477976 OS=Cucurbita maxima OX=3661 GN=LOC111477976... | [more] |
A0A6J1GDZ1 | 4.7e-89 | 98.21 | uncharacterized protein LOC111453126 OS=Cucurbita moschata OX=3662 GN=LOC1114531... | [more] |
A0A6J1I6U3 | 1.8e-85 | 91.67 | uncharacterized protein LOC111471264 OS=Cucurbita maxima OX=3661 GN=LOC111471264... | [more] |
A0A6J1CQY2 | 7.0e-85 | 87.50 | uncharacterized protein LOC111013764 OS=Momordica charantia OX=3673 GN=LOC111013... | [more] |
A0A6J1HGY5 | 1.7e-83 | 89.88 | uncharacterized protein LOC111463377 OS=Cucurbita moschata OX=3662 GN=LOC1114633... | [more] |
Match Name | E-value | Identity | Description | |
AT5G02740.1 | 1.7e-43 | 50.30 | Ribosomal protein S24e family protein | [more] |
AT5G02740.2 | 1.0e-32 | 52.89 | Ribosomal protein S24e family protein | [more] |