Carg13759 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg13759
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	dof zinc finger protein MNB1A-like
Location	Carg_Chr03: 4821054 .. 4821788 (+)
RNA-Seq Expression	Carg13759
Synteny	Carg13759

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTTGAGTTCGAAACAGGTTTCGATCGATGTATTTGATTGGAGCAAGACGCTTACGCCGCCACAGAAACTGTCAAGCGCCGCCGTGAAACGATCGCACCACCACCAAAATCCGTCACAAACTGAGCAATTAAAGTGCCCAAGATGCGATTCAACCAACACCAAATTCTGTTACTACAATAATTACAACAAATCTCAGCCGCGCCATTTTTGTAGAGCTTGTAAACGTCACTGGACCAATGGTGGAACTCTCCGAAACGTCCCTGTTGGTGGCGGCCGTAAAAACAAACGCTTAAAAAAAAAACCAATCCCCAAATCCTCCTCCTCCGCCATCGCCTCCGCCGCCGTCGCCGCCGCAGACGGCGTAATGATAAACACCCAATTTTCCCTTCCTCTGTATCAAGGGCTGATTTTCCCTCCGCCGCCGCCACCGCCGCCGCCGTCGTCGACCAACTGGGTGGAATGTGAAAACTTCACTACAAATTACGGAATTCTCAATTCCCAAAACGCAGATTTCTCTGGCGTTTCAACAACAACAGATCAAGAATTGAAGGCCATAGAAACAGAGCAACCCAACAGCACCAGTACACATCATCCATGGCAGCTTCCAACCACCAACTGCAGCGGCGCCGACATGTCGAACAGCAGCTACTGGAGCTGGGAAGACATCGACACCTTCGCCACAACGGATCTCAACATCCTATGGGACGACGACCACGACATCAAACCTTAA

mRNA sequence

ATGGGTTTGAGTTCGAAACAGGTTTCGATCGATGTATTTGATTGGAGCAAGACGCTTACGCCGCCACAGAAACTGTCAAGCGCCGCCGTGAAACGATCGCACCACCACCAAAATCCGTCACAAACTGAGCAATTAAAGTGCCCAAGATGCGATTCAACCAACACCAAATTCTGTTACTACAATAATTACAACAAATCTCAGCCGCGCCATTTTTGTAGAGCTTGTAAACGTCACTGGACCAATGGTGGAACTCTCCGAAACGTCCCTGTTGGTGGCGGCCGTAAAAACAAACGCTTAAAAAAAAAACCAATCCCCAAATCCTCCTCCTCCGCCATCGCCTCCGCCGCCGTCGCCGCCGCAGACGGCGTAATGATAAACACCCAATTTTCCCTTCCTCTGTATCAAGGGCTGATTTTCCCTCCGCCGCCGCCACCGCCGCCGCCGTCGTCGACCAACTGGGTGGAATGTGAAAACTTCACTACAAATTACGGAATTCTCAATTCCCAAAACGCAGATTTCTCTGGCGTTTCAACAACAACAGATCAAGAATTGAAGGCCATAGAAACAGAGCAACCCAACAGCACCAGTACACATCATCCATGGCAGCTTCCAACCACCAACTGCAGCGGCGCCGACATGTCGAACAGCAGCTACTGGAGCTGGGAAGACATCGACACCTTCGCCACAACGGATCTCAACATCCTATGGGACGACGACCACGACATCAAACCTTAA

Coding sequence (CDS)

ATGGGTTTGAGTTCGAAACAGGTTTCGATCGATGTATTTGATTGGAGCAAGACGCTTACGCCGCCACAGAAACTGTCAAGCGCCGCCGTGAAACGATCGCACCACCACCAAAATCCGTCACAAACTGAGCAATTAAAGTGCCCAAGATGCGATTCAACCAACACCAAATTCTGTTACTACAATAATTACAACAAATCTCAGCCGCGCCATTTTTGTAGAGCTTGTAAACGTCACTGGACCAATGGTGGAACTCTCCGAAACGTCCCTGTTGGTGGCGGCCGTAAAAACAAACGCTTAAAAAAAAAACCAATCCCCAAATCCTCCTCCTCCGCCATCGCCTCCGCCGCCGTCGCCGCCGCAGACGGCGTAATGATAAACACCCAATTTTCCCTTCCTCTGTATCAAGGGCTGATTTTCCCTCCGCCGCCGCCACCGCCGCCGCCGTCGTCGACCAACTGGGTGGAATGTGAAAACTTCACTACAAATTACGGAATTCTCAATTCCCAAAACGCAGATTTCTCTGGCGTTTCAACAACAACAGATCAAGAATTGAAGGCCATAGAAACAGAGCAACCCAACAGCACCAGTACACATCATCCATGGCAGCTTCCAACCACCAACTGCAGCGGCGCCGACATGTCGAACAGCAGCTACTGGAGCTGGGAAGACATCGACACCTTCGCCACAACGGATCTCAACATCCTATGGGACGACGACCACGACATCAAACCTTAA

Protein sequence

MGLSSKQVSIDVFDWSKTLTPPQKLSSAAVKRSHHHQNPSQTEQLKCPRCDSTNTKFCYYNNYNKSQPRHFCRACKRHWTNGGTLRNVPVGGGRKNKRLKKKPIPKSSSSAIASAAVAAADGVMINTQFSLPLYQGLIFPPPPPPPPPSSTNWVECENFTTNYGILNSQNADFSGVSTTTDQELKAIETEQPNSTSTHHPWQLPTTNCSGADMSNSSYWSWEDIDTFATTDLNILWDDDHDIKP

Homology

[Close]

BLAST of Carg13759 vs. NCBI nr
Match: KAG7033886.1 (Dof zinc finger protein DOF5.4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 506.9 bits (1304), Expect = 9.6e-140
Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 0


Query: 1   MGLSSKQVSIDVFDWSKTLTPPQKLSSAAVKRSHHHQNPSQTEQLKCPRCDSTNTKFCYY 60
           MGLSSKQVSIDVFDWSKTLTPPQKLSSAAVKRSHHHQNPSQTEQLKCPRCDSTNTKFCYY
Sbjct: 1   MGLSSKQVSIDVFDWSKTLTPPQKLSSAAVKRSHHHQNPSQTEQLKCPRCDSTNTKFCYY 60

Query: 61  NNYNKSQPRHFCRACKRHWTNGGTLRNVPVGGGRKNKRLKKKPIPKSSSSAIASAAVAAA 120
           NNYNKSQPRHFCRACKRHWTNGGTLRNVPVGGGRKNKRLKKKPIPKSSSSAIASAAVAAA
Sbjct: 61  NNYNKSQPRHFCRACKRHWTNGGTLRNVPVGGGRKNKRLKKKPIPKSSSSAIASAAVAAA 120

Query: 121 DGVMINTQFSLPLYQGLIFPPPPPPPPPSSTNWVECENFTTNYGILNSQNADFSGVSTTT 180
           DGVMINTQFSLPLYQGLIFPPPPPPPPPSSTNWVECENFTTNYGILNSQNADFSGVSTTT
Sbjct: 121 DGVMINTQFSLPLYQGLIFPPPPPPPPPSSTNWVECENFTTNYGILNSQNADFSGVSTTT 180

Query: 181 DQELKAIETEQPNSTSTHHPWQLPTTNCSGADMSNSSYWSWEDIDTFATTDLNILWDDDH 240
           DQELKAIETEQPNSTSTHHPWQLPTTNCSGADMSNSSYWSWEDIDTFATTDLNILWDDDH
Sbjct: 181 DQELKAIETEQPNSTSTHHPWQLPTTNCSGADMSNSSYWSWEDIDTFATTDLNILWDDDH 240

Query: 241 DIKP 245
           DIKP
Sbjct: 241 DIKP 244

[Close]

BLAST of Carg13759 vs. NCBI nr
Match: XP_022950407.1 (dof zinc finger protein MNB1A-like [Cucurbita moschata])

HSP 1 Score: 505.0 bits (1299), Expect = 3.7e-139
Identity = 243/244 (99.59%), Postives = 244/244 (100.00%), Query Frame = 0


Query: 1   MGLSSKQVSIDVFDWSKTLTPPQKLSSAAVKRSHHHQNPSQTEQLKCPRCDSTNTKFCYY 60
           MGLSSKQVSIDVFDWSKTLTPPQKLSSAAVKRSHHHQNPSQTEQLKCPRCDSTNTKFCYY
Sbjct: 1   MGLSSKQVSIDVFDWSKTLTPPQKLSSAAVKRSHHHQNPSQTEQLKCPRCDSTNTKFCYY 60

Query: 61  NNYNKSQPRHFCRACKRHWTNGGTLRNVPVGGGRKNKRLKKKPIPKSSSSAIASAAVAAA 120
           NNYNKSQPRHFCRACKRHWTNGGTLRNVPVGGGRKNKRLKKKPIPKSSSSAIASAAVAAA
Sbjct: 61  NNYNKSQPRHFCRACKRHWTNGGTLRNVPVGGGRKNKRLKKKPIPKSSSSAIASAAVAAA 120

Query: 121 DGVMINTQFSLPLYQGLIFPPPPPPPPPSSTNWVECENFTTNYGILNSQNADFSGVSTTT 180
           DGVMINTQFSLPLYQGLIFPPPPPPPPPSSTNWVECENFTTNYGILNSQNADFSGVSTTT
Sbjct: 121 DGVMINTQFSLPLYQGLIFPPPPPPPPPSSTNWVECENFTTNYGILNSQNADFSGVSTTT 180

Query: 181 DQELKAIETEQPNSTSTHHPWQLPTTNCSGADMSNSSYWSWEDIDTFATTDLNILWDDDH 240
           DQELKAIETEQPNSTSTHHPWQLPTTNCSGADMSNSSYWSWEDIDTFATTDLNILWDD+H
Sbjct: 181 DQELKAIETEQPNSTSTHHPWQLPTTNCSGADMSNSSYWSWEDIDTFATTDLNILWDDNH 240

Query: 241 DIKP 245
           DIKP
Sbjct: 241 DIKP 244

[Close]

BLAST of Carg13759 vs. NCBI nr
Match: KAG6603709.1 (Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 498.0 bits (1281), Expect = 4.5e-137
Identity = 243/248 (97.98%), Postives = 243/248 (97.98%), Query Frame = 0


Query: 1   MGLSSKQVSIDVFDWSKTLTPPQKLSSAAVKRSHHHQNPSQTEQLKCPRCDSTNTKFCYY 60
           MGLSSKQVSIDVFDWSKTLTPPQKLSSAAVKRSHHHQNPSQTEQLKCPRCDSTNTKFCYY
Sbjct: 1   MGLSSKQVSIDVFDWSKTLTPPQKLSSAAVKRSHHHQNPSQTEQLKCPRCDSTNTKFCYY 60

Query: 61  NNYNKSQPRHFCRACKRHWTNGGTLRNVPVGGGRKNKRLKKKPIPK----SSSSAIASAA 120
           NNYNKSQPRHFCRACKRHWTNGGTLRNVPVGGGRKNKRLKKK IPK    SSSSAIASAA
Sbjct: 61  NNYNKSQPRHFCRACKRHWTNGGTLRNVPVGGGRKNKRLKKKQIPKSSSSSSSSAIASAA 120

Query: 121 VAAADGVMINTQFSLPLYQGLIFPPPPPPPPPSSTNWVECENFTTNYGILNSQNADFSGV 180
           VAAADGVMINTQFSLPLYQGLIFPPPPPPPPPSSTNWVECENFTTNYGILNSQNADFSGV
Sbjct: 121 VAAADGVMINTQFSLPLYQGLIFPPPPPPPPPSSTNWVECENFTTNYGILNSQNADFSGV 180

Query: 181 STTTDQELKAIETEQPNSTSTHHPWQLPTTNCSGADMSNSSYWSWEDIDTFATTDLNILW 240
           STTTDQELKAIETEQPNSTSTHHPWQLPTTNCSGADMSNSSYWSWEDIDTFATTDLNILW
Sbjct: 181 STTTDQELKAIETEQPNSTSTHHPWQLPTTNCSGADMSNSSYWSWEDIDTFATTDLNILW 240

Query: 241 DDDHDIKP 245
           DDDHDIKP
Sbjct: 241 DDDHDIKP 248

[Close]

BLAST of Carg13759 vs. NCBI nr
Match: XP_023544607.1 (dof zinc finger protein MNB1A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 491.5 bits (1264), Expect = 4.2e-135
Identity = 238/244 (97.54%), Postives = 239/244 (97.95%), Query Frame = 0


Query: 1   MGLSSKQVSIDVFDWSKTLTPPQKLSSAAVKRSHHHQNPSQTEQLKCPRCDSTNTKFCYY 60
           MGLSSKQVSIDVFDWSKTLTPPQKLSSAAVKRSHHHQNPSQTEQLKCPRCDSTNTKFCYY
Sbjct: 1   MGLSSKQVSIDVFDWSKTLTPPQKLSSAAVKRSHHHQNPSQTEQLKCPRCDSTNTKFCYY 60

Query: 61  NNYNKSQPRHFCRACKRHWTNGGTLRNVPVGGGRKNKRLKKKPIPKSSSSAIASAAVAAA 120
           NNYNKSQPRHFCRACKRHWTNGGTLRNVPVGGGRKNKRLKKK IPKSSSS   SAAVAAA
Sbjct: 61  NNYNKSQPRHFCRACKRHWTNGGTLRNVPVGGGRKNKRLKKKQIPKSSSS---SAAVAAA 120

Query: 121 DGVMINTQFSLPLYQGLIFPPPPPPPPPSSTNWVECENFTTNYGILNSQNADFSGVSTTT 180
           DGVMINTQFSLPLYQGLIFPPPPPPPPPSSTNWVECENFTTNYGILNSQNADFSGVSTTT
Sbjct: 121 DGVMINTQFSLPLYQGLIFPPPPPPPPPSSTNWVECENFTTNYGILNSQNADFSGVSTTT 180

Query: 181 DQELKAIETEQPNSTSTHHPWQLPTTNCSGADMSNSSYWSWEDIDTFATTDLNILWDDDH 240
           DQELKAIETEQPN+T THHPWQLPTTNCSGADMSNSSYWSWEDIDTFATTDLNILWDDDH
Sbjct: 181 DQELKAIETEQPNTTGTHHPWQLPTTNCSGADMSNSSYWSWEDIDTFATTDLNILWDDDH 240

Query: 241 DIKP 245
           DIKP
Sbjct: 241 DIKP 241

[Close]

BLAST of Carg13759 vs. NCBI nr
Match: XP_022978891.1 (dof zinc finger protein DOF5.3-like [Cucurbita maxima])

HSP 1 Score: 470.7 bits (1210), Expect = 7.7e-129
Identity = 229/245 (93.47%), Postives = 237/245 (96.73%), Query Frame = 0


Query: 1   MGLSSKQVSIDVFDWSKTLTPPQKLSSAAVKRSHHHQNPSQTEQLKCPRCDSTNTKFCYY 60
           MGLSSKQVSIDVFDWSKTLTPP+KL+SAAVKRSHHHQNPSQTEQLKCPRCDSTNTKFCYY
Sbjct: 1   MGLSSKQVSIDVFDWSKTLTPPKKLTSAAVKRSHHHQNPSQTEQLKCPRCDSTNTKFCYY 60

Query: 61  NNYNKSQPRHFCRACKRHWTNGGTLRNVPVGGGRKNKRLKKKPIPK-SSSSAIASAAVAA 120
           NNYNKSQPRHFCRACKRHWTNGGTLRNVPVGGGRKNKRLKKK IPK SSSS+ A+AAVAA
Sbjct: 61  NNYNKSQPRHFCRACKRHWTNGGTLRNVPVGGGRKNKRLKKKQIPKSSSSSSAAAAAVAA 120

Query: 121 ADGVMINTQFSLPLYQGLIFPPPPPPPPPSSTNWVECENFTTNYGILNSQNADFSGVSTT 180
            DGVMINTQFSLPLYQGLIF  PPPPPPPSSTNW+ECENFTTNYGILNSQNADFSGVSTT
Sbjct: 121 VDGVMINTQFSLPLYQGLIF--PPPPPPPSSTNWLECENFTTNYGILNSQNADFSGVSTT 180

Query: 181 TDQELKAIETEQPNSTSTHHPWQLPTTNCSGADMSNSSYWSWEDIDTFATTDLNILWDDD 240
           TDQ+LKAIETEQPN+T THHPWQLPTT+CSGADMSNSSYWSWEDIDTFATTDLNILWD D
Sbjct: 181 TDQKLKAIETEQPNTTGTHHPWQLPTTSCSGADMSNSSYWSWEDIDTFATTDLNILWDVD 240

Query: 241 HDIKP 245
           HDIKP
Sbjct: 241 HDIKP 243

[Close]

BLAST of Carg13759 vs. ExPASy Swiss-Prot
Match: Q39088 (Dof zinc finger protein DOF3.4 OS=Arabidopsis thaliana OX=3702 GN=DOF3.4 PE=1 SV=2)

HSP 1 Score: 115.2 bits (287), Expect = 1.1e-24
Identity = 53/87 (60.92%), Postives = 68/87 (78.16%), Query Frame = 0


Query: 41  QTEQLKCPRCDSTNTKFCYYNNYNKSQPRHFCRACKRHWTNGGTLRNVPVGGGRKNKRLK 100
           Q EQL CPRCDS+NTKFCYYNNYN SQPRHFC+AC+R+WT+GGTLR+VPVGGG +    +
Sbjct: 26  QQEQLPCPRCDSSNTKFCYYNNYNFSQPRHFCKACRRYWTHGGTLRDVPVGGGTRKSAKR 85

Query: 101 KKPIPKSSSSAIASAAVAAADGVMINT 128
            +    SSSS++ S  V+ ++GV + T
Sbjct: 86  SRTCSNSSSSSV-SGVVSNSNGVPLQT 111

[Close]

BLAST of Carg13759 vs. ExPASy Swiss-Prot
Match: Q9FZA4 (Dof zinc finger protein DOF1.4 OS=Arabidopsis thaliana OX=3702 GN=DOF1.4 PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 2.4e-24
Identity = 56/89 (62.92%), Postives = 69/89 (77.53%), Query Frame = 0


Query: 28  AAVKRSHHHQNPSQTE-QLKCPRCDSTNTKFCYYNNYNKSQPRHFCRACKRHWTNGGTLR 87
           A+  +    Q P Q + QLKCPRCDS+NTKFCYYNNY+ SQPRHFC+ACKR+WT GGTLR
Sbjct: 9   ASSHQQQQQQQPQQPQPQLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLR 68

Query: 88  NVPVGGG-RKNKRLKKKPIPKSSSSAIAS 115
           NVPVGG  RKNKR+K+   P ++++  AS
Sbjct: 69  NVPVGGSYRKNKRVKR---PSTATTTTAS 94

[Close]

BLAST of Carg13759 vs. ExPASy Swiss-Prot
Match: Q8LDR0 (Dof zinc finger protein DOF5.4 OS=Arabidopsis thaliana OX=3702 GN=DOF5.4 PE=2 SV=2)

HSP 1 Score: 112.1 bits (279), Expect = 9.1e-24
Identity = 52/80 (65.00%), Postives = 62/80 (77.50%), Query Frame = 0


Query: 32  RSHHHQNPSQTEQLKCPRCDSTNTKFCYYNNYNKSQPRHFCRACKRHWTNGGTLRNVPVG 91
           R+H +   +  + LKCPRC+S NTKFCYYNNYN SQPRHFC+ C+R+WT GG LRNVPVG
Sbjct: 38  RAHQNNILNHHQSLKCPRCNSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVG 97

Query: 92  GG-RKNKRLKKKPIPKSSSS 111
           GG RK KR K K +P SSS+
Sbjct: 98  GGCRKAKRSKTKQVPSSSSA 117

[Close]

BLAST of Carg13759 vs. ExPASy Swiss-Prot
Match: Q8L9V6 (Dof zinc finger protein DOF1.1 OS=Arabidopsis thaliana OX=3702 GN=DOF1.1 PE=1 SV=2)

HSP 1 Score: 111.7 bits (278), Expect = 1.2e-23
Identity = 54/100 (54.00%), Postives = 69/100 (69.00%), Query Frame = 0


Query: 22  PQKLSSAAVKRSHHHQNPSQTEQLKCPRCDSTNTKFCYYNNYNKSQPRHFCRACKRHWTN 81
           P ++  +  +R+     P     LKCPRCDS+NTKFCYYNNYN +QPRHFC+ C+R+WT 
Sbjct: 54  PSRMGGSMAERARQANIPPLAGPLKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQ 113

Query: 82  GGTLRNVPVGGG--RKNKRLKKKPIPKSSSSAIASAAVAA 120
           GG LRNVPVGGG  R NK+ K   +  SSSS+  S++V A
Sbjct: 114 GGALRNVPVGGGCRRNNKKGKNGNLKSSSSSSKQSSSVNA 153

[Close]

BLAST of Carg13759 vs. ExPASy Swiss-Prot
Match: B9F1L8 (Dof zinc finger protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF2 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 2.0e-23
Identity = 50/83 (60.24%), Postives = 65/83 (78.31%), Query Frame = 0


Query: 39  PSQTEQLKCPRCDSTNTKFCYYNNYNKSQPRHFCRACKRHWTNGGTLRNVPVGGG-RKNK 98
           P + + L CPRC+STNTKFCYYNNY+  QPR+FC+ C+R+WT GG+LRNVPVGGG RKNK
Sbjct: 74  PQKEKALNCPRCNSTNTKFCYYNNYSLQQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNK 133

Query: 99  RLKKKPIPKSSSSAIASAAVAAA 121
           R     +P +++SA  SAAV+ +
Sbjct: 134 RSSSSVVPSAAASASTSAAVSGS 156

[Close]

BLAST of Carg13759 vs. ExPASy TrEMBL
Match: A0A6J1GEQ8 (dof zinc finger protein MNB1A-like OS=Cucurbita moschata OX=3662 GN=LOC111453517 PE=4 SV=1)

HSP 1 Score: 505.0 bits (1299), Expect = 1.8e-139
Identity = 243/244 (99.59%), Postives = 244/244 (100.00%), Query Frame = 0


Query: 1   MGLSSKQVSIDVFDWSKTLTPPQKLSSAAVKRSHHHQNPSQTEQLKCPRCDSTNTKFCYY 60
           MGLSSKQVSIDVFDWSKTLTPPQKLSSAAVKRSHHHQNPSQTEQLKCPRCDSTNTKFCYY
Sbjct: 1   MGLSSKQVSIDVFDWSKTLTPPQKLSSAAVKRSHHHQNPSQTEQLKCPRCDSTNTKFCYY 60

Query: 61  NNYNKSQPRHFCRACKRHWTNGGTLRNVPVGGGRKNKRLKKKPIPKSSSSAIASAAVAAA 120
           NNYNKSQPRHFCRACKRHWTNGGTLRNVPVGGGRKNKRLKKKPIPKSSSSAIASAAVAAA
Sbjct: 61  NNYNKSQPRHFCRACKRHWTNGGTLRNVPVGGGRKNKRLKKKPIPKSSSSAIASAAVAAA 120

Query: 121 DGVMINTQFSLPLYQGLIFPPPPPPPPPSSTNWVECENFTTNYGILNSQNADFSGVSTTT 180
           DGVMINTQFSLPLYQGLIFPPPPPPPPPSSTNWVECENFTTNYGILNSQNADFSGVSTTT
Sbjct: 121 DGVMINTQFSLPLYQGLIFPPPPPPPPPSSTNWVECENFTTNYGILNSQNADFSGVSTTT 180

Query: 181 DQELKAIETEQPNSTSTHHPWQLPTTNCSGADMSNSSYWSWEDIDTFATTDLNILWDDDH 240
           DQELKAIETEQPNSTSTHHPWQLPTTNCSGADMSNSSYWSWEDIDTFATTDLNILWDD+H
Sbjct: 181 DQELKAIETEQPNSTSTHHPWQLPTTNCSGADMSNSSYWSWEDIDTFATTDLNILWDDNH 240

Query: 241 DIKP 245
           DIKP
Sbjct: 241 DIKP 244

[Close]

BLAST of Carg13759 vs. ExPASy TrEMBL
Match: A0A6J1IP95 (dof zinc finger protein DOF5.3-like OS=Cucurbita maxima OX=3661 GN=LOC111478708 PE=4 SV=1)

HSP 1 Score: 470.7 bits (1210), Expect = 3.7e-129
Identity = 229/245 (93.47%), Postives = 237/245 (96.73%), Query Frame = 0


Query: 1   MGLSSKQVSIDVFDWSKTLTPPQKLSSAAVKRSHHHQNPSQTEQLKCPRCDSTNTKFCYY 60
           MGLSSKQVSIDVFDWSKTLTPP+KL+SAAVKRSHHHQNPSQTEQLKCPRCDSTNTKFCYY
Sbjct: 1   MGLSSKQVSIDVFDWSKTLTPPKKLTSAAVKRSHHHQNPSQTEQLKCPRCDSTNTKFCYY 60

Query: 61  NNYNKSQPRHFCRACKRHWTNGGTLRNVPVGGGRKNKRLKKKPIPK-SSSSAIASAAVAA 120
           NNYNKSQPRHFCRACKRHWTNGGTLRNVPVGGGRKNKRLKKK IPK SSSS+ A+AAVAA
Sbjct: 61  NNYNKSQPRHFCRACKRHWTNGGTLRNVPVGGGRKNKRLKKKQIPKSSSSSSAAAAAVAA 120

Query: 121 ADGVMINTQFSLPLYQGLIFPPPPPPPPPSSTNWVECENFTTNYGILNSQNADFSGVSTT 180
            DGVMINTQFSLPLYQGLIF  PPPPPPPSSTNW+ECENFTTNYGILNSQNADFSGVSTT
Sbjct: 121 VDGVMINTQFSLPLYQGLIF--PPPPPPPSSTNWLECENFTTNYGILNSQNADFSGVSTT 180

Query: 181 TDQELKAIETEQPNSTSTHHPWQLPTTNCSGADMSNSSYWSWEDIDTFATTDLNILWDDD 240
           TDQ+LKAIETEQPN+T THHPWQLPTT+CSGADMSNSSYWSWEDIDTFATTDLNILWD D
Sbjct: 181 TDQKLKAIETEQPNTTGTHHPWQLPTTSCSGADMSNSSYWSWEDIDTFATTDLNILWDVD 240

Query: 241 HDIKP 245
           HDIKP
Sbjct: 241 HDIKP 243

[Close]

BLAST of Carg13759 vs. ExPASy TrEMBL
Match: A0A5D3CPL5 (Dof zinc finger protein DOF1.4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007280 PE=4 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 2.4e-88
Identity = 184/273 (67.40%), Postives = 196/273 (71.79%), Query Frame = 0


Query: 1   MGLSSKQVSIDVFDWSKTLTPPQKLS------SAAVKRSHH---HQNPSQTEQLKCPRCD 60
           MGLSSKQVSID FDWSK L   QKL       S+ VKRS H   +Q   Q EQLKCPRCD
Sbjct: 1   MGLSSKQVSIDGFDWSKALMQAQKLELPKLAPSSGVKRSQHQNQNQIQPQIEQLKCPRCD 60

Query: 61  STNTKFCYYNNYNKSQPRHFCRACKRHWTNGGTLRNVPVGGGRKNKRLKKKPIPKSSSSA 120
           STNTKFCYYNNYNKSQPRHFCRACKRHWT GGTLRNVPVGGGRKNKRLKKKP   S  S+
Sbjct: 61  STNTKFCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGGRKNKRLKKKPTTNSKKSS 120

Query: 121 IASAAVAAADGVMINTQF------SLPLYQGLIFPPPPPPPPPSSTNWVECENFTTNYGI 180
            ++AA AAAD  +IN Q       +LPLYQGLIF       PPSS+NW ECENFTTNYGI
Sbjct: 121 SSTAATAAAD--LINPQMDVHHFQNLPLYQGLIF------SPPSSSNWAECENFTTNYGI 180

Query: 181 LNSQNADFSGVSTTT--------------DQELKAIETEQPNSTSTHHPWQLPTTNCSGA 240
           LNSQN DFS VSTTT              DQELK  ETEQP    THHPWQLP+T C   
Sbjct: 181 LNSQNPDFSAVSTTTSTHSPISPKFNNYSDQELKPTETEQP----THHPWQLPSTGCGIG 240

Query: 241 DMSNSSYWSWEDIDTFATTDLNILWDDDHDIKP 245
           DMS SSYWSW+DI+TF  TDLNI WDD+HDIKP
Sbjct: 241 DMS-SSYWSWDDINTFTATDLNIPWDDEHDIKP 260

[Close]

BLAST of Carg13759 vs. ExPASy TrEMBL
Match: A0A1S3AZE8 (dof zinc finger protein DOF1.4-like OS=Cucumis melo OX=3656 GN=LOC103484541 PE=4 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 2.4e-88
Identity = 184/273 (67.40%), Postives = 196/273 (71.79%), Query Frame = 0


Query: 1   MGLSSKQVSIDVFDWSKTLTPPQKLS------SAAVKRSHH---HQNPSQTEQLKCPRCD 60
           MGLSSKQVSID FDWSK L   QKL       S+ VKRS H   +Q   Q EQLKCPRCD
Sbjct: 1   MGLSSKQVSIDGFDWSKALMQAQKLELPKLAPSSGVKRSQHQNQNQIQPQIEQLKCPRCD 60

Query: 61  STNTKFCYYNNYNKSQPRHFCRACKRHWTNGGTLRNVPVGGGRKNKRLKKKPIPKSSSSA 120
           STNTKFCYYNNYNKSQPRHFCRACKRHWT GGTLRNVPVGGGRKNKRLKKKP   S  S+
Sbjct: 61  STNTKFCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGGRKNKRLKKKPTTNSKKSS 120

Query: 121 IASAAVAAADGVMINTQF------SLPLYQGLIFPPPPPPPPPSSTNWVECENFTTNYGI 180
            ++AA AAAD  +IN Q       +LPLYQGLIF       PPSS+NW ECENFTTNYGI
Sbjct: 121 SSTAATAAAD--LINPQMDVHHFQNLPLYQGLIF------SPPSSSNWAECENFTTNYGI 180

Query: 181 LNSQNADFSGVSTTT--------------DQELKAIETEQPNSTSTHHPWQLPTTNCSGA 240
           LNSQN DFS VSTTT              DQELK  ETEQP    THHPWQLP+T C   
Sbjct: 181 LNSQNPDFSAVSTTTSTHSPISPKFNNYSDQELKPTETEQP----THHPWQLPSTGCGIG 240

Query: 241 DMSNSSYWSWEDIDTFATTDLNILWDDDHDIKP 245
           DMS SSYWSW+DI+TF  TDLNI WDD+HDIKP
Sbjct: 241 DMS-SSYWSWDDINTFTATDLNIPWDDEHDIKP 260

[Close]

BLAST of Carg13759 vs. ExPASy TrEMBL
Match: A0A0A0KLF4 (Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G517150 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 3.5e-87
Identity = 181/273 (66.30%), Postives = 194/273 (71.06%), Query Frame = 0


Query: 1   MGLSSKQVSIDVFDWSKTLTPPQKLS------SAAVKRSHHH---QNPSQTEQLKCPRCD 60
           MGLSSKQVSID FDWSK L   QKL       S+ VKRS H    Q   Q EQLKCPRCD
Sbjct: 1   MGLSSKQVSIDGFDWSKALMQAQKLELPKLAPSSGVKRSQHQNQIQIQPQIEQLKCPRCD 60

Query: 61  STNTKFCYYNNYNKSQPRHFCRACKRHWTNGGTLRNVPVGGGRKNKRLKKKPIPKSSSSA 120
           STNTKFCYYNNYNKSQPRHFCRACKRHWT GGTLRNVPVGGGRKNKRLKKKP   S  S+
Sbjct: 61  STNTKFCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGGRKNKRLKKKPTTNSKKSS 120

Query: 121 IASAAVAAADGVMINTQF------SLPLYQGLIFPPPPPPPPPSSTNWVECENFTTNYGI 180
            ++AA  AAD  +IN Q       +LPLYQGLIF       PPSS+NW ECENFTTNYGI
Sbjct: 121 SSTAATTAAD--LINPQMDVHHFQNLPLYQGLIF------SPPSSSNWAECENFTTNYGI 180

Query: 181 LNSQNADFSGVSTTT--------------DQELKAIETEQPNSTSTHHPWQLPTTNCSGA 240
           LNSQN DFS VSTTT              D+ELK  ETEQP    THHPWQLP+T C   
Sbjct: 181 LNSQNPDFSAVSTTTSTHSPISPKFNNYSDKELKPTETEQP----THHPWQLPSTGCGIG 240

Query: 241 DMSNSSYWSWEDIDTFATTDLNILWDDDHDIKP 245
           DMSN SYW+W+DI+TF  TDLNI WDD+HDIKP
Sbjct: 241 DMSN-SYWTWDDINTFTATDLNIPWDDEHDIKP 260

[Close]

BLAST of Carg13759 vs. TAIR 10
Match: AT3G50410.1 (OBF binding protein 1 )

HSP 1 Score: 115.2 bits (287), Expect = 7.6e-26
Identity = 53/87 (60.92%), Postives = 68/87 (78.16%), Query Frame = 0


Query: 41  QTEQLKCPRCDSTNTKFCYYNNYNKSQPRHFCRACKRHWTNGGTLRNVPVGGGRKNKRLK 100
           Q EQL CPRCDS+NTKFCYYNNYN SQPRHFC+AC+R+WT+GGTLR+VPVGGG +    +
Sbjct: 26  QQEQLPCPRCDSSNTKFCYYNNYNFSQPRHFCKACRRYWTHGGTLRDVPVGGGTRKSAKR 85

Query: 101 KKPIPKSSSSAIASAAVAAADGVMINT 128
            +    SSSS++ S  V+ ++GV + T
Sbjct: 86  SRTCSNSSSSSV-SGVVSNSNGVPLQT 111

[Close]

BLAST of Carg13759 vs. TAIR 10
Match: AT1G28310.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 114.0 bits (284), Expect = 1.7e-25
Identity = 56/89 (62.92%), Postives = 69/89 (77.53%), Query Frame = 0


Query: 28  AAVKRSHHHQNPSQTE-QLKCPRCDSTNTKFCYYNNYNKSQPRHFCRACKRHWTNGGTLR 87
           A+  +    Q P Q + QLKCPRCDS+NTKFCYYNNY+ SQPRHFC+ACKR+WT GGTLR
Sbjct: 9   ASSHQQQQQQQPQQPQPQLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLR 68

Query: 88  NVPVGGG-RKNKRLKKKPIPKSSSSAIAS 115
           NVPVGG  RKNKR+K+   P ++++  AS
Sbjct: 69  NVPVGGSYRKNKRVKR---PSTATTTTAS 94

[Close]

BLAST of Carg13759 vs. TAIR 10
Match: AT1G28310.2 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 114.0 bits (284), Expect = 1.7e-25
Identity = 56/89 (62.92%), Postives = 69/89 (77.53%), Query Frame = 0


Query: 28  AAVKRSHHHQNPSQTE-QLKCPRCDSTNTKFCYYNNYNKSQPRHFCRACKRHWTNGGTLR 87
           A+  +    Q P Q + QLKCPRCDS+NTKFCYYNNY+ SQPRHFC+ACKR+WT GGTLR
Sbjct: 23  ASSHQQQQQQQPQQPQPQLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLR 82

Query: 88  NVPVGGG-RKNKRLKKKPIPKSSSSAIAS 115
           NVPVGG  RKNKR+K+   P ++++  AS
Sbjct: 83  NVPVGGSYRKNKRVKR---PSTATTTTAS 108

[Close]

BLAST of Carg13759 vs. TAIR 10
Match: AT5G60850.1 (OBF binding protein 4 )

HSP 1 Score: 112.1 bits (279), Expect = 6.4e-25
Identity = 52/80 (65.00%), Postives = 62/80 (77.50%), Query Frame = 0


Query: 32  RSHHHQNPSQTEQLKCPRCDSTNTKFCYYNNYNKSQPRHFCRACKRHWTNGGTLRNVPVG 91
           R+H +   +  + LKCPRC+S NTKFCYYNNYN SQPRHFC+ C+R+WT GG LRNVPVG
Sbjct: 38  RAHQNNILNHHQSLKCPRCNSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVG 97

Query: 92  GG-RKNKRLKKKPIPKSSSS 111
           GG RK KR K K +P SSS+
Sbjct: 98  GGCRKAKRSKTKQVPSSSSA 117

[Close]

BLAST of Carg13759 vs. TAIR 10
Match: AT1G07640.2 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 111.7 bits (278), Expect = 8.4e-25
Identity = 54/100 (54.00%), Postives = 69/100 (69.00%), Query Frame = 0


Query: 22  PQKLSSAAVKRSHHHQNPSQTEQLKCPRCDSTNTKFCYYNNYNKSQPRHFCRACKRHWTN 81
           P ++  +  +R+     P     LKCPRCDS+NTKFCYYNNYN +QPRHFC+ C+R+WT 
Sbjct: 54  PSRMGGSMAERARQANIPPLAGPLKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQ 113

Query: 82  GGTLRNVPVGGG--RKNKRLKKKPIPKSSSSAIASAAVAA 120
           GG LRNVPVGGG  R NK+ K   +  SSSS+  S++V A
Sbjct: 114 GGALRNVPVGGGCRRNNKKGKNGNLKSSSSSSKQSSSVNA 153

The following BLAST results are available for this feature:

BLAST of Carg13759 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7033886.1	9.6e-140	100.00	Dof zinc finger protein DOF5.4, partial [Cucurbita argyrosperma subsp. argyrospe...	[more]
XP_022950407.1	3.7e-139	99.59	dof zinc finger protein MNB1A-like [Cucurbita moschata]	[more]
KAG6603709.1	4.5e-137	97.98	Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023544607.1	4.2e-135	97.54	dof zinc finger protein MNB1A-like [Cucurbita pepo subsp. pepo]	[more]
XP_022978891.1	7.7e-129	93.47	dof zinc finger protein DOF5.3-like [Cucurbita maxima]	[more]

BLAST of Carg13759 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39088	1.1e-24	60.92	Dof zinc finger protein DOF3.4 OS=Arabidopsis thaliana OX=3702 GN=DOF3.4 PE=1 SV...	[more]
Q9FZA4	2.4e-24	62.92	Dof zinc finger protein DOF1.4 OS=Arabidopsis thaliana OX=3702 GN=DOF1.4 PE=2 SV...	[more]
Q8LDR0	9.1e-24	65.00	Dof zinc finger protein DOF5.4 OS=Arabidopsis thaliana OX=3702 GN=DOF5.4 PE=2 SV...	[more]
Q8L9V6	1.2e-23	54.00	Dof zinc finger protein DOF1.1 OS=Arabidopsis thaliana OX=3702 GN=DOF1.1 PE=1 SV...	[more]
B9F1L8	2.0e-23	60.24	Dof zinc finger protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF2 PE=2 ...	[more]

BLAST of Carg13759 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GEQ8	1.8e-139	99.59	dof zinc finger protein MNB1A-like OS=Cucurbita moschata OX=3662 GN=LOC111453517...	[more]
A0A6J1IP95	3.7e-129	93.47	dof zinc finger protein DOF5.3-like OS=Cucurbita maxima OX=3661 GN=LOC111478708 ...	[more]
A0A5D3CPL5	2.4e-88	67.40	Dof zinc finger protein DOF1.4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3AZE8	2.4e-88	67.40	dof zinc finger protein DOF1.4-like OS=Cucumis melo OX=3656 GN=LOC103484541 PE=4...	[more]
A0A0A0KLF4	3.5e-87	66.30	Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G517150 PE...	[more]

BLAST of Carg13759 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G50410.1	7.6e-26	60.92	OBF binding protein 1	[more]
AT1G28310.1	1.7e-25	62.92	Dof-type zinc finger DNA-binding family protein	[more]
AT1G28310.2	1.7e-25	62.92	Dof-type zinc finger DNA-binding family protein	[more]
AT5G60850.1	6.4e-25	65.00	OBF binding protein 4	[more]
AT1G07640.2	8.4e-25	54.00	Dof-type zinc finger DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 43..97 e-value: 1.5E-31 score: 108.3
IPR003851	Zinc finger, Dof-type	PROSITE	PS01361	ZF_DOF_1	coord: 47..83
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 45..99 score: 27.418905
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..106
None	No IPR available	PANTHER	PTHR31992:SF97	OS06G0284500 PROTEIN	coord: 32..212
None	No IPR available	PANTHER	PTHR31992	DOF ZINC FINGER PROTEIN DOF1.4-RELATED	coord: 32..212

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg13759-RA	Carg13759-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding