Carg13692 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg13692
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
LocationCarg_Chr03: 5091703 .. 5092325 (-)
RNA-Seq ExpressionCarg13692
SyntenyCarg13692
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCCAAATCTTTCACATTTTCAAGTGGTTGCACCTGTGGTATAGCAGTTGCTATGGCCTGTACGACAGTTTCAAAAGCAAAAAAGCAATCTACAAACTCTACTTCTAAGTAGTTCCATGTTATTAATGTAGCCTTCCTTCCTACATGCTAATATATCTTTGTCCCATCGCTCCCATAAGATCTTTCTCACCTAGTTGATTCTTCTTTGTCCCTCCACCTACCAATCGTTCCAAGTGATAACGTATACAAGTCTTCCTATAACTATGCCTGTTTCTGGTTCTTGATTACTCCCAGGGTGTGTGCGTCAGATCGAAAAGACATTTTTTTCCTGTCTAAGATAACGTGGAATCAAACTTTGTGAACTGGATAACATCCTGCGAAATCATATGAGCTATGTATTGTAGCTGAATAAGCCAACCTGAACACAGGAAGAGATCATTTGAGCTTGGTCCATTAGACATGGGCCGATTGGGCTGAAGAATTTGGTGGTGGTGGGACAAGCATCTGTATAGGGTTGCATGCAGACAGCTACGAGAGTCAGAAGAGGGTGACCACTGGGTGCTGTGGCCGTGCCTGTGGTGACGCATCCATTGCCATTCCTCTCTCTGCCACTCTCTGA

mRNA sequence

ATGGCTCCAAATCTTTCACATTTTCAAGTGGTTGCACCTGTGACATGGGCCGATTGGGCTGAAGAATTTGGTGGTGGTGGGACAAGCATCTGTATAGGGTTGCATGCAGACAGCTACGAGAGTCAGAAGAGGGTGACCACTGGGTGCTGTGGCCGTGCCTGTGGTGACGCATCCATTGCCATTCCTCTCTCTGCCACTCTCTGA

Coding sequence (CDS)

ATGGCTCCAAATCTTTCACATTTTCAAGTGGTTGCACCTGTGACATGGGCCGATTGGGCTGAAGAATTTGGTGGTGGTGGGACAAGCATCTGTATAGGGTTGCATGCAGACAGCTACGAGAGTCAGAAGAGGGTGACCACTGGGTGCTGTGGCCGTGCCTGTGGTGACGCATCCATTGCCATTCCTCTCTCTGCCACTCTCTGA

Protein sequence

MAPNLSHFQVVAPVTWADWAEEFGGGGTSICIGLHADSYESQKRVTTGCCGRACGDASIAIPLSATL
Homology
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BLAST of Carg13692 vs. NCBI nr
Match: KAG7033952.1 (hypothetical protein SDJN02_03678, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 145.2 bits (365), Expect = 2.0e-31
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0 

Query: 1  MAPNLSHFQVVAPVTWADWAEEFGGGGTSICIGLHADSYESQKRVTTGCCGRACGDASIA 60
          MAPNLSHFQVVAPVTWADWAEEFGGGGTSICIGLHADSYESQKRVTTGCCGRACGDASIA
Sbjct: 1  MAPNLSHFQVVAPVTWADWAEEFGGGGTSICIGLHADSYESQKRVTTGCCGRACGDASIA 60

Query: 61 IPLSATL 68
          IPLSATL
Sbjct: 61 IPLSATL 67

The following BLAST results are available for this feature:
BLAST of Carg13692 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7033952.12.0e-31100.00hypothetical protein SDJN02_03678, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of Carg13692 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg13692 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg13692 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg13692-RACarg13692-RAmRNA