Carg13617 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg13617
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionSmall ubiquitin-related modifier
LocationCarg_Chr02: 372528 .. 375182 (+)
RNA-Seq ExpressionCarg13617
SyntenyCarg13617
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATTTTTGTTACTCCTTGTGACGAGGCGGAAATCAGAATATTTGAGCCCTAATTTCTGGTAAAATCGGCCAAGATTGAAGAATGTCGGGTGTTGCAAACACGCAGCAGGAGGAAGACAAGAAGCCTAACGATCAATCGGCGCATATCAACCTGAAGGTCAAAGGCCAGGTTGGTTTCTTTCTTGATTACTCTGTTCGATGGCTTTCTTATGGTTGGTTTTTGCGAAATTTTCATGCTCTAAGGCTTTGATTTTGATCATTTTTTTTCTTCATGTTTTTTGGTTACTTGACGTTAGGTTTTCTTATGTTCTCTTTTAATATCACTTTTGGCTGTGTCGGCTAGGTAGTGGACGATGAAGTAGGAGTGTAAATTATAGGATTGTAGGGTTTTATTGATCACTATAATTCACTCTATGTTCTCTATTATTGAATCGCTTGCTGGTTGTTCGCAAAAATGAAGCCGGAAAATGAAAAAAAAAAAAAACAAACAATAAGTTTCTTGTTATATATGCAATTATATGTTACAGTTGCGATGACAGGTGCGATGTTTAAATTTTGGTTTTTTTTTTAAATTTATTATTATCTTTACCTTTCCTTCTCAGAATCTAGCAAATCCAATTGAGTGATAGCTGGAATTCTACTTTCCGTTTTTGGAGCAATATTTGCAATTTGTTGGCATTCAGACTGTTCCTTATTTTTTTTTTTTTACTCACTCTGGGAGCTGGGAGTGTGTTTCCCGTGGATGGACAAGATTGAGTACTGGTCCTCATGTCCTACACCGGATAAGCTAATGGTTCTTTGATGTCTTTCTAGTATAATGTTCATTGGGATGTATATGCTGTTGTGGATTGAATACCTGCTGGGCTGTAGCCTTACTGAGTACTAACAGCGCATTTACCGTTTCTTTTCCTTCTAAATAATGCTTCTGGGGTGTTTGTTTTCCATGAACACTAAAGCATTAGGGGGTTTTCTCTGAAGCTGGGTAGTGTTCTTTGGTTCATTTTGTTGGAATGCATTGAGAAATGTCCTTTTTTTTTTTTTAATATCACGTCCAATGGAGTGGCGTTGGTGTATTTTAAAGATTCAATTGAATCAAACCCTTGAAAAATAGAGTGGGGTTCATCACAAGTCTTTCACTATTTCAGTGAAAGGTTCTGTTTTACCATAAAGACAATACGATGAAATCTGACACATGCCTAAGCAGCAGAAGAGGTAAGACATTCTTCAGCTATCTCAAACACATGGCATGGAGTTGTACATCTGTGCATTTTTTTATTATTACCGAAACGTGTTGCCTTGTGGTCTCTGTTGTGATTATTGATACAAATGATGGTGATTTAATTGGAATGTTGAGTTGTTTCTTATTAGGCTAAATTATATAAAAAAAAAATTCCTTGATTTTGCCATTTGTTATAAAAGATACCTATATGTTTTTTAAAAGTTTTAATGTTATCGTTAAGAGTGTTGGATGTATAGTTCTTTCCTATTTAATCCATATAAGTGTCCGATTCACTAGCATGTCGTTTCTAATAATTATCACATTGATTTTCCATCCAATATTCTAAAGAATTTCTACTTAAAGTTAGTTTTGAAACCATTATTAAATGTAAAAGTAATATTTCAACTTTCGAAATAATATAATTTTTCTAAACAAAGGATGAAGTTGGTGTTTGAAGTGTCTATGAATCCTTAGCTCCGTTCTGTCTCAATTTCTTCTGTCCAGGAGTGATTGACACAATCTTTTTTCTTGTCTCCCATCAAAATTCCAGGGAGTTGTCCTTTTCATGCTCTCTGATCTTTCGATCTTCCTCTGACGCATGTTCCAGTTTCCTTTCTCTTCTTTGTTTCACTACATATATTGTCGTTTCTTTTCACCCTCACTCCACTTTATCAAGTTCTTTCTGCAATGGTCGTGCTCCTTTTTCCTATTCTTTCTAGTTCTTATTTACACCAATTAGTTGAAGTCAATTTATGGTTGGAGATATTGATTTAGGAATATTGTAATATTGATTCCTTTTGTTAGCTTGTTTACTATACCACTCTTGTACATTTTTTCATTTATCTTCAAGAAACCAGTTTGTATGCATGAAAGGCATAATAACCTCTCTTAGTCATCGCTTTTTGATGTACTATAGGATGGAAATGAGGTGTTCTTTAGGATTAAAAGGAGCACTCAGCTGAAGAAACTGATGAATGCTTACTGTGATCGACAATCCGTGGATCTGAACTCCATTGCCTTCCTATTTGATGGTCGTCGTCTTCGTGCCGAGCAAACTCCCGATGAGGTATACTTTACTCTAATTTAAACAGATATCCAATACCAAATTCATATATGTTTAACAAAAGCGTGCAACTTCCCAGCTAGAGATGGAGGATGGAGATGAGATTGATGCAATGTTGCACCAGACCGGTGGGTCTACCCTTTGGAATACATGTTCTACTGCTCTGTAGATTCGCAGAAGACTGCCCGAAGTAGTAACTTAAAATGTGAACACTTTCGTTGACAAGGGAGAAGATCTAAGTTTAATCTTTTGTTTTGAGGTCTATATTATCTTCTCGGATCAATTGTTCTTTTTAAAGCTTTGGAGGTACATGGGTGTGTATTTTACTTGAACTTTGTACTTAGTTTAATGGTTAAAGCTCTTTTTGTTCTTCT

mRNA sequence

TATTTTTGTTACTCCTTGTGACGAGGCGGAAATCAGAATATTTGAGCCCTAATTTCTGGTAAAATCGGCCAAGATTGAAGAATGTCGGGTGTTGCAAACACGCAGCAGGAGGAAGACAAGAAGCCTAACGATCAATCGGCGCATATCAACCTGAAGGTCAAAGGCCAGGATGGAAATGAGGTGTTCTTTAGGATTAAAAGGAGCACTCAGCTGAAGAAACTGATGAATGCTTACTGTGATCGACAATCCGTGGATCTGAACTCCATTGCCTTCCTATTTGATGGTCGTCGTCTTCGTGCCGAGCAAACTCCCGATGAGCTAGAGATGGAGGATGGAGATGAGATTGATGCAATGTTGCACCAGACCGGTGGGTCTACCCTTTGGAATACATGTTCTACTGCTCTGTAGATTCGCAGAAGACTGCCCGAAGTAGTAACTTAAAATGTGAACACTTTCGTTGACAAGGGAGAAGATCTAAGTTTAATCTTTTGTTTTGAGGTCTATATTATCTTCTCGGATCAATTGTTCTTTTTAAAGCTTTGGAGGTACATGGGTGTGTATTTTACTTGAACTTTGTACTTAGTTTAATGGTTAAAGCTCTTTTTGTTCTTCT

Coding sequence (CDS)

ATGTCGGGTGTTGCAAACACGCAGCAGGAGGAAGACAAGAAGCCTAACGATCAATCGGCGCATATCAACCTGAAGGTCAAAGGCCAGGATGGAAATGAGGTGTTCTTTAGGATTAAAAGGAGCACTCAGCTGAAGAAACTGATGAATGCTTACTGTGATCGACAATCCGTGGATCTGAACTCCATTGCCTTCCTATTTGATGGTCGTCGTCTTCGTGCCGAGCAAACTCCCGATGAGCTAGAGATGGAGGATGGAGATGAGATTGATGCAATGTTGCACCAGACCGGTGGGTCTACCCTTTGGAATACATGTTCTACTGCTCTGTAG

Protein sequence

MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTLWNTCSTAL
Homology
[Close]
BLAST of Carg13617 vs. NCBI nr
Match: XP_022970791.1 (small ubiquitin-related modifier 1-like [Cucurbita maxima] >XP_023533825.1 small ubiquitin-related modifier 1-like [Cucurbita pepo subsp. pepo] >KAG6604755.1 Small ubiquitin-related modifier 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034883.1 Small ubiquitin-related modifier 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 218.8 bits (556), Expect = 2.3e-53
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0 

Query: 1   MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
           MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 1   MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60

Query: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTLWNTCSTAL 109
           SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTLWNTCSTAL
Sbjct: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTLWNTCSTAL 108

[Close]
BLAST of Carg13617 vs. NCBI nr
Match: XP_022947043.1 (small ubiquitin-related modifier 1-like [Cucurbita moschata])

HSP 1 Score: 217.6 bits (553), Expect = 5.2e-53
Identity = 107/108 (99.07%), Postives = 108/108 (100.00%), Query Frame = 0 

Query: 1   MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
           MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 1   MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60

Query: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTLWNTCSTAL 109
           SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTLWNTCST+L
Sbjct: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTLWNTCSTSL 108

[Close]
BLAST of Carg13617 vs. NCBI nr
Match: XP_004150752.1 (small ubiquitin-related modifier 1 [Cucumis sativus] >XP_038902909.1 small ubiquitin-related modifier 1-like [Benincasa hispida] >KGN46994.1 hypothetical protein Csa_020805 [Cucumis sativus])

HSP 1 Score: 197.6 bits (501), Expect = 5.5e-47
Identity = 98/99 (98.99%), Postives = 98/99 (98.99%), Query Frame = 0 

Query: 1   MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
           MSGV NTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60

Query: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST 100
           SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST
Sbjct: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST 99

[Close]
BLAST of Carg13617 vs. NCBI nr
Match: KAG6570548.1 (Tyrosine-protein phosphatase DSP1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 196.1 bits (497), Expect = 1.6e-46
Identity = 97/99 (97.98%), Postives = 98/99 (98.99%), Query Frame = 0 

Query: 1   MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
           MSGV NTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 243 MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 302

Query: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST 100
           SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS+
Sbjct: 303 SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS 341

[Close]
BLAST of Carg13617 vs. NCBI nr
Match: XP_008456407.1 (PREDICTED: small ubiquitin-related modifier 1 [Cucumis melo] >KAA0054458.1 small ubiquitin-related modifier 1 [Cucumis melo var. makuwa] >TYK14581.1 small ubiquitin-related modifier 1 [Cucumis melo var. makuwa])

HSP 1 Score: 196.1 bits (497), Expect = 1.6e-46
Identity = 97/99 (97.98%), Postives = 98/99 (98.99%), Query Frame = 0 

Query: 1   MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
           MSGV NTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60

Query: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST 100
           SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS+
Sbjct: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS 99

[Close]
BLAST of Carg13617 vs. ExPASy Swiss-Prot
Match: P55852 (Small ubiquitin-related modifier 1 OS=Arabidopsis thaliana OX=3702 GN=SUMO1 PE=1 SV=2)

HSP 1 Score: 173.3 bits (438), Expect = 1.5e-42
Identity = 85/93 (91.40%), Postives = 88/93 (94.62%), Query Frame = 0 

Query: 6  NTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFL 65
          +  QEEDKKP D  AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD+NSIAFL
Sbjct: 2  SANQEEDKKPGDGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNSIAFL 61

Query: 66 FDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS 99
          FDGRRLRAEQTPDEL+MEDGDEIDAMLHQTGGS
Sbjct: 62 FDGRRLRAEQTPDELDMEDGDEIDAMLHQTGGS 94

[Close]
BLAST of Carg13617 vs. ExPASy Swiss-Prot
Match: Q9FLP6 (Small ubiquitin-related modifier 2 OS=Arabidopsis thaliana OX=3702 GN=SUMO2 PE=1 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 2.8e-41
Identity = 85/88 (96.59%), Postives = 85/88 (96.59%), Query Frame = 0 

Query: 10 EEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGR 69
          EEDKKP DQ AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD NSIAFLFDGR
Sbjct: 6  EEDKKP-DQGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDFNSIAFLFDGR 65

Query: 70 RLRAEQTPDELEMEDGDEIDAMLHQTGG 98
          RLRAEQTPDELEMEDGDEIDAMLHQTGG
Sbjct: 66 RLRAEQTPDELEMEDGDEIDAMLHQTGG 92

[Close]
BLAST of Carg13617 vs. ExPASy Swiss-Prot
Match: P55857 (Small ubiquitin-related modifier 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SUMO1 PE=1 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 7.5e-39
Identity = 81/91 (89.01%), Postives = 83/91 (91.21%), Query Frame = 0 

Query: 10 EEDKKP---NDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLF 69
          EEDKKP       AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD+N+IAFLF
Sbjct: 6  EEDKKPAGGEGGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNAIAFLF 65

Query: 70 DGRRLRAEQTPDELEMEDGDEIDAMLHQTGG 98
          DGRRLR EQTPDELEMEDGDEIDAMLHQTGG
Sbjct: 66 DGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 96

[Close]
BLAST of Carg13617 vs. ExPASy Swiss-Prot
Match: O13351 (Ubiquitin-like protein pmt3/smt3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=pmt3 PE=1 SV=2)

HSP 1 Score: 109.0 bits (271), Expect = 3.4e-23
Identity = 52/90 (57.78%), Postives = 68/90 (75.56%), Query Frame = 0 

Query: 10  EEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGR 69
           ++D KP+ +  HINLKV GQD NEVFF+IK++T+  KLM  YC RQ   +NS+ FL DG 
Sbjct: 26  QQDVKPSTE--HINLKVVGQDNNEVFFKIKKTTEFSKLMKIYCARQGKSMNSLRFLVDGE 85

Query: 70  RLRAEQTPDELEMEDGDEIDAMLHQTGGST 100
           R+R +QTP EL+MEDGD+I+A+L Q GG T
Sbjct: 86  RIRPDQTPAELDMEDGDQIEAVLEQLGGCT 113

[Close]
BLAST of Carg13617 vs. ExPASy Swiss-Prot
Match: Q9FLP5 (Small ubiquitin-related modifier 3 OS=Arabidopsis thaliana OX=3702 GN=SUMO3 PE=1 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 7.8e-20
Identity = 49/89 (55.06%), Postives = 64/89 (71.91%), Query Frame = 0 

Query: 11 EDKKPND--QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDG 70
          +D KP D  Q AH+ LKVK QDG+EV F+ K+S  LKKLM  YCDR+ + L++ AF+F+G
Sbjct: 5  QDDKPIDQEQEAHVILKVKSQDGDEVLFKNKKSAPLKKLMYVYCDRRGLKLDAFAFIFNG 64

Query: 71 RRLRAEQTPDELEMEDGDEIDAMLHQTGG 98
           R+   +TPDEL+MEDGD IDA    +GG
Sbjct: 65 ARIGGLETPDELDMEDGDVIDACRAMSGG 93

[Close]
BLAST of Carg13617 vs. ExPASy TrEMBL
Match: A0A6J1I1J4 (Small ubiquitin-related modifier OS=Cucurbita maxima OX=3661 GN=LOC111469669 PE=3 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.1e-53
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0 

Query: 1   MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
           MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 1   MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60

Query: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTLWNTCSTAL 109
           SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTLWNTCSTAL
Sbjct: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTLWNTCSTAL 108

[Close]
BLAST of Carg13617 vs. ExPASy TrEMBL
Match: A0A6J1G5I7 (Small ubiquitin-related modifier OS=Cucurbita moschata OX=3662 GN=LOC111451039 PE=3 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 2.5e-53
Identity = 107/108 (99.07%), Postives = 108/108 (100.00%), Query Frame = 0 

Query: 1   MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
           MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 1   MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60

Query: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTLWNTCSTAL 109
           SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTLWNTCST+L
Sbjct: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTLWNTCSTSL 108

[Close]
BLAST of Carg13617 vs. ExPASy TrEMBL
Match: A0A0A0KDV8 (Small ubiquitin-related modifier OS=Cucumis sativus OX=3659 GN=Csa_6G157680 PE=3 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 2.7e-47
Identity = 98/99 (98.99%), Postives = 98/99 (98.99%), Query Frame = 0 

Query: 1   MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
           MSGV NTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60

Query: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST 100
           SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST
Sbjct: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST 99

[Close]
BLAST of Carg13617 vs. ExPASy TrEMBL
Match: A0A6J1FTW7 (Small ubiquitin-related modifier OS=Cucurbita moschata OX=3662 GN=LOC111448116 PE=3 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 7.8e-47
Identity = 97/99 (97.98%), Postives = 98/99 (98.99%), Query Frame = 0 

Query: 1   MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
           MSGV NTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60

Query: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST 100
           SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS+
Sbjct: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS 99

[Close]
BLAST of Carg13617 vs. ExPASy TrEMBL
Match: A0A5A7UHK7 (Small ubiquitin-related modifier OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G00760 PE=3 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 7.8e-47
Identity = 97/99 (97.98%), Postives = 98/99 (98.99%), Query Frame = 0 

Query: 1   MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
           MSGV NTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60

Query: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST 100
           SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS+
Sbjct: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS 99

[Close]
BLAST of Carg13617 vs. TAIR 10
Match: AT4G26840.1 (small ubiquitin-like modifier 1 )

HSP 1 Score: 173.3 bits (438), Expect = 1.0e-43
Identity = 85/93 (91.40%), Postives = 88/93 (94.62%), Query Frame = 0 

Query: 6  NTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFL 65
          +  QEEDKKP D  AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD+NSIAFL
Sbjct: 2  SANQEEDKKPGDGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNSIAFL 61

Query: 66 FDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS 99
          FDGRRLRAEQTPDEL+MEDGDEIDAMLHQTGGS
Sbjct: 62 FDGRRLRAEQTPDELDMEDGDEIDAMLHQTGGS 94

[Close]
BLAST of Carg13617 vs. TAIR 10
Match: AT5G55160.1 (small ubiquitin-like modifier 2 )

HSP 1 Score: 169.1 bits (427), Expect = 2.0e-42
Identity = 85/88 (96.59%), Postives = 85/88 (96.59%), Query Frame = 0 

Query: 10 EEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGR 69
          EEDKKP DQ AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD NSIAFLFDGR
Sbjct: 6  EEDKKP-DQGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDFNSIAFLFDGR 65

Query: 70 RLRAEQTPDELEMEDGDEIDAMLHQTGG 98
          RLRAEQTPDELEMEDGDEIDAMLHQTGG
Sbjct: 66 RLRAEQTPDELEMEDGDEIDAMLHQTGG 92

[Close]
BLAST of Carg13617 vs. TAIR 10
Match: AT5G55160.2 (small ubiquitin-like modifier 2 )

HSP 1 Score: 159.8 bits (403), Expect = 1.2e-39
Identity = 85/101 (84.16%), Postives = 85/101 (84.16%), Query Frame = 0 

Query: 10  EEDKKPNDQSAHINLKVKGQ-------------DGNEVFFRIKRSTQLKKLMNAYCDRQS 69
           EEDKKP DQ AHINLKVKGQ             DGNEVFFRIKRSTQLKKLMNAYCDRQS
Sbjct: 6   EEDKKP-DQGAHINLKVKGQAFFVVGTWLVIDTDGNEVFFRIKRSTQLKKLMNAYCDRQS 65

Query: 70  VDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG 98
           VD NSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG
Sbjct: 66  VDFNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG 105

[Close]
BLAST of Carg13617 vs. TAIR 10
Match: AT5G55170.1 (small ubiquitin-like modifier 3 )

HSP 1 Score: 97.8 bits (242), Expect = 5.6e-21
Identity = 49/89 (55.06%), Postives = 64/89 (71.91%), Query Frame = 0 

Query: 11 EDKKPND--QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDG 70
          +D KP D  Q AH+ LKVK QDG+EV F+ K+S  LKKLM  YCDR+ + L++ AF+F+G
Sbjct: 5  QDDKPIDQEQEAHVILKVKSQDGDEVLFKNKKSAPLKKLMYVYCDRRGLKLDAFAFIFNG 64

Query: 71 RRLRAEQTPDELEMEDGDEIDAMLHQTGG 98
           R+   +TPDEL+MEDGD IDA    +GG
Sbjct: 65 ARIGGLETPDELDMEDGDVIDACRAMSGG 93

[Close]
BLAST of Carg13617 vs. TAIR 10
Match: AT5G55856.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 94.7 bits (234), Expect = 4.7e-20
Identity = 45/91 (49.45%), Postives = 66/91 (72.53%), Query Frame = 0 

Query: 12  DKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRL 71
           DKKP   S+HI +KVK QD   V+FRIKR  +L+K+M+AY D+  V+++++ FLFDG R+
Sbjct: 5   DKKPLIPSSHITVKVKNQDDICVYFRIKRDVELRKMMHAYSDKVGVEMSTLRFLFDGNRI 64

Query: 72  RAEQTPDELEMEDGDEIDAMLHQTGGSTLWN 103
           +  QTP+EL +ED DEI+A   Q GG + ++
Sbjct: 65  KLNQTPNELGLEDEDEIEAFGEQLGGFSFFH 95

The following BLAST results are available for this feature:
BLAST of Carg13617 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022970791.12.3e-53100.00small ubiquitin-related modifier 1-like [Cucurbita maxima] >XP_023533825.1 small... [more]
XP_022947043.15.2e-5399.07small ubiquitin-related modifier 1-like [Cucurbita moschata][more]
XP_004150752.15.5e-4798.99small ubiquitin-related modifier 1 [Cucumis sativus] >XP_038902909.1 small ubiqu... [more]
KAG6570548.11.6e-4697.98Tyrosine-protein phosphatase DSP1, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_008456407.11.6e-4697.98PREDICTED: small ubiquitin-related modifier 1 [Cucumis melo] >KAA0054458.1 small... [more]
BLAST of Carg13617 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P558521.5e-4291.40Small ubiquitin-related modifier 1 OS=Arabidopsis thaliana OX=3702 GN=SUMO1 PE=1... [more]
Q9FLP62.8e-4196.59Small ubiquitin-related modifier 2 OS=Arabidopsis thaliana OX=3702 GN=SUMO2 PE=1... [more]
P558577.5e-3989.01Small ubiquitin-related modifier 1 OS=Oryza sativa subsp. japonica OX=39947 GN=S... [more]
O133513.4e-2357.78Ubiquitin-like protein pmt3/smt3 OS=Schizosaccharomyces pombe (strain 972 / ATCC... [more]
Q9FLP57.8e-2055.06Small ubiquitin-related modifier 3 OS=Arabidopsis thaliana OX=3702 GN=SUMO3 PE=1... [more]
BLAST of Carg13617 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1I1J41.1e-53100.00Small ubiquitin-related modifier OS=Cucurbita maxima OX=3661 GN=LOC111469669 PE=... [more]
A0A6J1G5I72.5e-5399.07Small ubiquitin-related modifier OS=Cucurbita moschata OX=3662 GN=LOC111451039 P... [more]
A0A0A0KDV82.7e-4798.99Small ubiquitin-related modifier OS=Cucumis sativus OX=3659 GN=Csa_6G157680 PE=3... [more]
A0A6J1FTW77.8e-4797.98Small ubiquitin-related modifier OS=Cucurbita moschata OX=3662 GN=LOC111448116 P... [more]
A0A5A7UHK77.8e-4797.98Small ubiquitin-related modifier OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
BLAST of Carg13617 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G26840.11.0e-4391.40small ubiquitin-like modifier 1 [more]
AT5G55160.12.0e-4296.59small ubiquitin-like modifier 2 [more]
AT5G55160.21.2e-3984.16small ubiquitin-like modifier 2 [more]
AT5G55170.15.6e-2155.06small ubiquitin-like modifier 3 [more]
AT5G55856.14.7e-2049.45Ubiquitin-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000626Ubiquitin-like domainSMARTSM00213ubq_7coord: 22..93
e-value: 2.5E-14
score: 63.6
IPR000626Ubiquitin-like domainPROSITEPS50053UBIQUITIN_2coord: 20..97
score: 15.906139
IPR022617Rad60/SUMO-like domainPFAMPF11976Rad60-SLDcoord: 22..92
e-value: 6.8E-25
score: 86.7
NoneNo IPR availableGENE3D3.10.20.90coord: 1..97
e-value: 6.0E-41
score: 141.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availablePANTHERPTHR10562:SF87SMALL UBIQUITIN-RELATED MODIFIERcoord: 5..98
NoneNo IPR availablePANTHERPTHR10562SMALL UBIQUITIN-RELATED MODIFIERcoord: 5..98
NoneNo IPR availableCDDcd16116Ubl_Smt3_likecoord: 20..93
e-value: 1.52035E-49
score: 149.686
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 8..98

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg13617-RACarg13617-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016925 protein sumoylation
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
molecular_function GO:0031386 protein tag
molecular_function GO:0044389 ubiquitin-like protein ligase binding
molecular_function GO:0005515 protein binding