Carg13510 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg13510
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionethylene-responsive transcription factor ERF003-like
LocationCarg_Chr08: 3192328 .. 3192971 (+)
RNA-Seq ExpressionCarg13510
SyntenyCarg13510
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCCGACCTCAACAACGGTATCGCGGTGTTCGTCAACGACATTGGGGCTCTTGGGTCTCCGAAATTCGCCACCCTCTATTGTAATTCTCTTCTTTTATACACTAAAAATACAAACTTTTGAGATTTTTAATACTCCCTTCTTCTTCCTTCTACTTAAAACTTTCTTTTTCAGAAAGACGAGAATATGGTTGGGGACGTTCGAGACGGCGGAGGATGCAGCCCGAGCCTACGACGAGGCAGCGAGGCTGATGTGCGGCCCCAAAGCTAGAACTAACTTCCAACTCAATCTCAACGATCAACCCTCCTTTTCTTCTTCCTCCAACCTTCTCTCACCGGCGCTCATAGCCAAACTACACAAATGCCATTTAGCCTCACTCCAAATCGCCAAAAAACACATCCATAAGCAACAACCGGGGTTCGACCTGAACGGCGGTCCTCCACCGAGCATTTCCAGAACCACCACCGGCCAGTGGCCACCGGAAGAAACATGGGTCTACTCCGACGAAGCCCAAATGGAGATCAACAACAACGACAACAACAACATTCCTCATCAGCCATGCCTTCAACCTCTTGAAGATGATCACATTGAACAAATGATTCAAGAGTTGCTAGATCTCGGACCGTTCGAAATCATTACATAG

mRNA sequence

ATGGCCCGACCTCAACAACGGTATCGCGGTGTTCGTCAACGACATTGGGGCTCTTGGGTCTCCGAAATTCGCCACCCTCTATTAAAGACGAGAATATGGTTGGGGACGTTCGAGACGGCGGAGGATGCAGCCCGAGCCTACGACGAGGCAGCGAGGCTGATGTGCGGCCCCAAAGCTAGAACTAACTTCCAACTCAATCTCAACGATCAACCCTCCTTTTCTTCTTCCTCCAACCTTCTCTCACCGGCGCTCATAGCCAAACTACACAAATGCCATTTAGCCTCACTCCAAATCGCCAAAAAACACATCCATAAGCAACAACCGGGGTTCGACCTGAACGGCGGTCCTCCACCGAGCATTTCCAGAACCACCACCGGCCAGTGGCCACCGGAAGAAACATGGGTCTACTCCGACGAAGCCCAAATGGAGATCAACAACAACGACAACAACAACATTCCTCATCAGCCATGCCTTCAACCTCTTGAAGATGATCACATTGAACAAATGATTCAAGAGTTGCTAGATCTCGGACCGTTCGAAATCATTACATAG

Coding sequence (CDS)

ATGGCCCGACCTCAACAACGGTATCGCGGTGTTCGTCAACGACATTGGGGCTCTTGGGTCTCCGAAATTCGCCACCCTCTATTAAAGACGAGAATATGGTTGGGGACGTTCGAGACGGCGGAGGATGCAGCCCGAGCCTACGACGAGGCAGCGAGGCTGATGTGCGGCCCCAAAGCTAGAACTAACTTCCAACTCAATCTCAACGATCAACCCTCCTTTTCTTCTTCCTCCAACCTTCTCTCACCGGCGCTCATAGCCAAACTACACAAATGCCATTTAGCCTCACTCCAAATCGCCAAAAAACACATCCATAAGCAACAACCGGGGTTCGACCTGAACGGCGGTCCTCCACCGAGCATTTCCAGAACCACCACCGGCCAGTGGCCACCGGAAGAAACATGGGTCTACTCCGACGAAGCCCAAATGGAGATCAACAACAACGACAACAACAACATTCCTCATCAGCCATGCCTTCAACCTCTTGAAGATGATCACATTGAACAAATGATTCAAGAGTTGCTAGATCTCGGACCGTTCGAAATCATTACATAG

Protein sequence

MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFQLNLNDQPSFSSSSNLLSPALIAKLHKCHLASLQIAKKHIHKQQPGFDLNGGPPPSISRTTTGQWPPEETWVYSDEAQMEINNNDNNNIPHQPCLQPLEDDHIEQMIQELLDLGPFEIIT
Homology
[Close]
BLAST of Carg13510 vs. NCBI nr
Match: KAG6593370.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025719.1 Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 383.3 bits (983), Expect = 1.2e-102
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60

Query: 61  TNFQLNLNDQPSFSSSSNLLSPALIAKLHKCHLASLQIAKKHIHKQQPGFDLNGGPPPSI 120
           TNFQLNLNDQPSFSSSSNLLSPALIAKLHKCHLASLQIAKKHIHKQQPGFDLNGGPPPSI
Sbjct: 61  TNFQLNLNDQPSFSSSSNLLSPALIAKLHKCHLASLQIAKKHIHKQQPGFDLNGGPPPSI 120

Query: 121 SRTTTGQWPPEETWVYSDEAQMEINNNDNNNIPHQPCLQPLEDDHIEQMIQELLDLGPFE 180
           SRTTTGQWPPEETWVYSDEAQMEINNNDNNNIPHQPCLQPLEDDHIEQMIQELLDLGPFE
Sbjct: 121 SRTTTGQWPPEETWVYSDEAQMEINNNDNNNIPHQPCLQPLEDDHIEQMIQELLDLGPFE 180

Query: 181 IIT 184
           IIT
Sbjct: 181 IIT 183

[Close]
BLAST of Carg13510 vs. NCBI nr
Match: XP_022959765.1 (ethylene-responsive transcription factor ERF003-like [Cucurbita moschata])

HSP 1 Score: 376.3 bits (965), Expect = 1.5e-100
Identity = 180/183 (98.36%), Postives = 180/183 (98.36%), Query Frame = 0 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60

Query: 61  TNFQLNLNDQPSFSSSSNLLSPALIAKLHKCHLASLQIAKKHIHKQQPGFDLNGGPPPSI 120
           TNFQLNLNDQPSFSSSSNLLSPALIAKLHKCHLASLQI KKHIHKQ PGFDLNGGPPPSI
Sbjct: 61  TNFQLNLNDQPSFSSSSNLLSPALIAKLHKCHLASLQITKKHIHKQHPGFDLNGGPPPSI 120

Query: 121 SRTTTGQWPPEETWVYSDEAQMEINNNDNNNIPHQPCLQPLEDDHIEQMIQELLDLGPFE 180
           SRTTTGQWPPEETWVYSDEAQMEINNNDNNNI HQPCLQPLEDDHIEQMIQELLDLGPFE
Sbjct: 121 SRTTTGQWPPEETWVYSDEAQMEINNNDNNNIHHQPCLQPLEDDHIEQMIQELLDLGPFE 180

Query: 181 IIT 184
           IIT
Sbjct: 181 IIT 183

[Close]
BLAST of Carg13510 vs. NCBI nr
Match: XP_023513557.1 (ethylene-responsive transcription factor ERF003-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 360.1 bits (923), Expect = 1.1e-95
Identity = 176/183 (96.17%), Postives = 176/183 (96.17%), Query Frame = 0 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60

Query: 61  TNFQLNLNDQPSFSSSSNLLSPALIAKLHKCHLASLQIAKKHIHKQQPGFDLNGGPPPSI 120
           TNFQLNLNDQPSFSSSSNLLSPALIAKLHKCHLASLQIAKKHIHKQ PGFD NGGPPPSI
Sbjct: 61  TNFQLNLNDQPSFSSSSNLLSPALIAKLHKCHLASLQIAKKHIHKQHPGFDPNGGPPPSI 120

Query: 121 SRTTTGQWPPEETWVYSDEAQMEINNNDNNNIPHQPCLQPLEDDHIEQMIQELLDLGPFE 180
           SRTTTG WPPEETWVYSDEAQMEINNND NNI  Q CLQPLEDDHIEQMIQELLDLGPFE
Sbjct: 121 SRTTTGPWPPEETWVYSDEAQMEINNND-NNIHRQQCLQPLEDDHIEQMIQELLDLGPFE 180

Query: 181 IIT 184
           IIT
Sbjct: 181 IIT 182

[Close]
BLAST of Carg13510 vs. NCBI nr
Match: XP_023004394.1 (ethylene-responsive transcription factor ERF003-like [Cucurbita maxima])

HSP 1 Score: 358.2 bits (918), Expect = 4.2e-95
Identity = 174/183 (95.08%), Postives = 176/183 (96.17%), Query Frame = 0 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQ+YRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR
Sbjct: 1   MARPQQQYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60

Query: 61  TNFQLNLNDQPSFSSSSNLLSPALIAKLHKCHLASLQIAKKHIHKQQPGFDLNGGPPPSI 120
           TNFQLNLNDQPSFSSSSNLLSPALIAKLHKCHLASLQIAKKHIHKQ PGFD NGGPPPSI
Sbjct: 61  TNFQLNLNDQPSFSSSSNLLSPALIAKLHKCHLASLQIAKKHIHKQHPGFDPNGGPPPSI 120

Query: 121 SRTTTGQWPPEETWVYSDEAQMEINNNDNNNIPHQPCLQPLEDDHIEQMIQELLDLGPFE 180
           SRTTTGQWPPEETWVYSDEAQM+I    NNNI HQPCLQPLEDDHIEQMIQELLDLGPFE
Sbjct: 121 SRTTTGQWPPEETWVYSDEAQMKI----NNNIHHQPCLQPLEDDHIEQMIQELLDLGPFE 179

Query: 181 IIT 184
           IIT
Sbjct: 181 IIT 179

[Close]
BLAST of Carg13510 vs. NCBI nr
Match: XP_038899890.1 (ethylene-responsive transcription factor ERF003-like [Benincasa hispida])

HSP 1 Score: 306.6 bits (784), Expect = 1.4e-79
Identity = 159/186 (85.48%), Postives = 163/186 (87.63%), Query Frame = 0 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGP AR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPNAR 60

Query: 61  TNFQLNLNDQPSFSSSSNLLSPALIAKLHKCHLASLQIAKKHIHKQQP-GFDLNGGPPPS 120
           TNFQ N NDQ S SSSSNLLS ALIAKLHKCHLASLQIAKKHIHKQ P GF     PPPS
Sbjct: 61  TNFQYNPNDQHSSSSSSNLLSAALIAKLHKCHLASLQIAKKHIHKQHPAGFQ---PPPPS 120

Query: 121 ISRTTTG-QWPPEETWVYSDEAQMEIN-NNDNNNIPHQPCLQPLEDDHIEQMIQELLDLG 180
           I+  TTG +W PEETWVYSDE QME+N NN+NNNI HQ CLQPLEDDHIEQMIQELL LG
Sbjct: 121 IAGPTTGRRWTPEETWVYSDEGQMEMNDNNNNNNIHHQQCLQPLEDDHIEQMIQELLHLG 180

Query: 181 PFEIIT 184
            FEIIT
Sbjct: 181 SFEIIT 183

[Close]
BLAST of Carg13510 vs. ExPASy Swiss-Prot
Match: Q94AW5 (Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 GN=ERF003 PE=1 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 9.1e-45
Identity = 107/181 (59.12%), Postives = 120/181 (66.30%), Query Frame = 0 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQR+RGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGP+AR
Sbjct: 1   MARPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFQLNLNDQPSFSSSSNLLSPALIAKLHKCHLASLQIAKKHIHKQQPGFDLNGGPPPSI 120
           TNF  N N  P  +SSS LLS  L AKLHKC++ASLQ+ K+   + Q           S 
Sbjct: 61  TNFPYNPNAIP--TSSSKLLSATLTAKLHKCYMASLQMTKQTQTQTQT------QTARSQ 120

Query: 121 SRTTTGQWPPEETWVYSDEAQMEINNNDNNNIPHQPCLQPLEDDHIEQMIQELLDLGPFE 180
           S  + G    E           EI   D  N   Q   +PLE+DHIEQMI+ELL  G  E
Sbjct: 121 SADSDGVTANESHLNRGVTETTEIKWED-GNANMQQNFRPLEEDHIEQMIEELLHYGSIE 172

Query: 181 I 182
           +
Sbjct: 181 L 172

[Close]
BLAST of Carg13510 vs. ExPASy Swiss-Prot
Match: P16146 (Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 7.7e-36
Identity = 91/172 (52.91%), Postives = 110/172 (63.95%), Query Frame = 0 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQRYRG RQRHWGSWVSEIRH +LKTRIW GTFE+AEDAARAYDEAARLMCG +AR
Sbjct: 1   MARPQQRYRGFRQRHWGSWVSEIRHSILKTRIWQGTFESAEDAARAYDEAARLMCGTRAR 60

Query: 61  TNFQLNLNDQPSFSSSSNLLSPALIAKLHKCHLASLQIAKKHIHKQQPGFDLNGGPPPSI 120
           TNF  N N   S SSSS LLS  LIAKLH+C++ASLQ+ +     + P   +   P  ++
Sbjct: 61  TNFPYNPN--ASQSSSSKLLSATLIAKLHRCYMASLQMTRPSSLPEAP--RIIASPNNAV 120

Query: 121 SRT-TTGQWPPEETWVYSDEAQMEINNNDNNNIPHQPCLQ---PLEDDHIEQ 169
                     P++     ++ + E   N +       C Q   PLE+DHI Q
Sbjct: 121 KGIGADAMLLPKK----REQEEQETGGNLDFKKVKVECSQQFKPLEEDHIAQ 164

[Close]
BLAST of Carg13510 vs. ExPASy Swiss-Prot
Match: Q9XI33 (Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN=WIN1 PE=2 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 4.7e-25
Identity = 62/101 (61.39%), Postives = 71/101 (70.30%), Query Frame = 0 

Query: 6   QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFQL 65
           +++RGVRQRHWGSWV+EIRHPLLK RIWLGTFETAE+AARAYDEAA LM G  A+TNF L
Sbjct: 5   KKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPL 64

Query: 66  NLND---------------QPSFSSSSNLLSPALIAKLHKC 92
           N N+                 S S+SS+ LS  L AKL KC
Sbjct: 65  NNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKC 105

[Close]
BLAST of Carg13510 vs. ExPASy Swiss-Prot
Match: Q3E958 (Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702 GN=SHN3 PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 5.4e-21
Identity = 51/84 (60.71%), Postives = 63/84 (75.00%), Query Frame = 0 

Query: 6  QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFQ- 65
          +++RGVRQR WGSWVSEIRHPLLK R+WLGTF+TAE AARAYD+AA LM G  A+TNF  
Sbjct: 5  KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64

Query: 66 LNLNDQPSFSSSSNLLSPALIAKL 89
          +  N   S   +S L SP  +++L
Sbjct: 65 IKSNGSNSLEINSALRSPKSLSEL 88

[Close]
BLAST of Carg13510 vs. ExPASy Swiss-Prot
Match: Q9LFN7 (Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702 GN=SHN2 PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 9.2e-21
Identity = 51/86 (59.30%), Postives = 66/86 (76.74%), Query Frame = 0 

Query: 6  QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFQL 65
          +++RGVRQR WGSWVSEIRHPLLK R+WLGTFETAE AARAYD+AA LM G  A+TNF +
Sbjct: 5  RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFPV 64

Query: 66 NLNDQPS---FSSSSNLLSPALIAKL 89
            +++ S      +S L+SP  +++L
Sbjct: 65 VKSEEGSDHVKDVNSPLMSPKSLSEL 90

[Close]
BLAST of Carg13510 vs. ExPASy TrEMBL
Match: A0A6J1H793 (ethylene-responsive transcription factor ERF003-like OS=Cucurbita moschata OX=3662 GN=LOC111460738 PE=4 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 7.1e-101
Identity = 180/183 (98.36%), Postives = 180/183 (98.36%), Query Frame = 0 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60

Query: 61  TNFQLNLNDQPSFSSSSNLLSPALIAKLHKCHLASLQIAKKHIHKQQPGFDLNGGPPPSI 120
           TNFQLNLNDQPSFSSSSNLLSPALIAKLHKCHLASLQI KKHIHKQ PGFDLNGGPPPSI
Sbjct: 61  TNFQLNLNDQPSFSSSSNLLSPALIAKLHKCHLASLQITKKHIHKQHPGFDLNGGPPPSI 120

Query: 121 SRTTTGQWPPEETWVYSDEAQMEINNNDNNNIPHQPCLQPLEDDHIEQMIQELLDLGPFE 180
           SRTTTGQWPPEETWVYSDEAQMEINNNDNNNI HQPCLQPLEDDHIEQMIQELLDLGPFE
Sbjct: 121 SRTTTGQWPPEETWVYSDEAQMEINNNDNNNIHHQPCLQPLEDDHIEQMIQELLDLGPFE 180

Query: 181 IIT 184
           IIT
Sbjct: 181 IIT 183

[Close]
BLAST of Carg13510 vs. ExPASy TrEMBL
Match: A0A6J1KW57 (ethylene-responsive transcription factor ERF003-like OS=Cucurbita maxima OX=3661 GN=LOC111497726 PE=4 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 2.0e-95
Identity = 174/183 (95.08%), Postives = 176/183 (96.17%), Query Frame = 0 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQ+YRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR
Sbjct: 1   MARPQQQYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60

Query: 61  TNFQLNLNDQPSFSSSSNLLSPALIAKLHKCHLASLQIAKKHIHKQQPGFDLNGGPPPSI 120
           TNFQLNLNDQPSFSSSSNLLSPALIAKLHKCHLASLQIAKKHIHKQ PGFD NGGPPPSI
Sbjct: 61  TNFQLNLNDQPSFSSSSNLLSPALIAKLHKCHLASLQIAKKHIHKQHPGFDPNGGPPPSI 120

Query: 121 SRTTTGQWPPEETWVYSDEAQMEINNNDNNNIPHQPCLQPLEDDHIEQMIQELLDLGPFE 180
           SRTTTGQWPPEETWVYSDEAQM+I    NNNI HQPCLQPLEDDHIEQMIQELLDLGPFE
Sbjct: 121 SRTTTGQWPPEETWVYSDEAQMKI----NNNIHHQPCLQPLEDDHIEQMIQELLDLGPFE 179

Query: 181 IIT 184
           IIT
Sbjct: 181 IIT 179

[Close]
BLAST of Carg13510 vs. ExPASy TrEMBL
Match: A0A1S3CE50 (ethylene-responsive transcription factor ERF003-like OS=Cucumis melo OX=3656 GN=LOC103499832 PE=4 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 3.6e-76
Identity = 152/202 (75.25%), Postives = 163/202 (80.69%), Query Frame = 0 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60

Query: 61  TNFQLNLNDQP-----SFSSSSNLLSPALIAKLHKCHLASLQIAKKHIHKQQPGFD---- 120
           TNF  NLNDQ      S SSSS LLS ALI KLHKCHLASLQIAK+H+HKQ PGF+    
Sbjct: 61  TNFPYNLNDQQSSSSFSSSSSSKLLSAALIEKLHKCHLASLQIAKQHVHKQHPGFEPSYL 120

Query: 121 -LNGGPPPSISRTTTGQWPPEETWVYSDEAQMEI--------NNNDNNNIPHQPC-LQPL 180
              G PPPSI+  TT +W  +ETWVYSD+ Q+E+        NNN+NNNI HQ C L+PL
Sbjct: 121 AYGGSPPPSITGATTSRWTSDETWVYSDKGQLEMNNNNNNNNNNNNNNNIHHQQCQLEPL 180

Query: 181 EDDHIEQMIQELLDLGPFEIIT 184
           EDDHIEQMIQELLDLG FEIIT
Sbjct: 181 EDDHIEQMIQELLDLGSFEIIT 202

[Close]
BLAST of Carg13510 vs. ExPASy TrEMBL
Match: A0A0A0KA12 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G432080 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 2.0e-74
Identity = 151/196 (77.04%), Postives = 162/196 (82.65%), Query Frame = 0 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60

Query: 61  TNFQLNLNDQ---PSFSSSSNLLSPALIAKLHKCHLASLQIAKKHIHKQQPGFD-----L 120
           TNF  N NDQ    SFSSSS LLS ALI KLHKCHLASLQIAK+H+HKQ  GF+      
Sbjct: 61  TNFPYNPNDQQSSSSFSSSSKLLSAALIEKLHKCHLASLQIAKQHVHKQHAGFEPSYLAY 120

Query: 121 NGGPPPSISRTTTGQWPPEETWVYSDEA-QMEINNND---NNNIPHQPC-LQPLEDDHIE 180
           +G PPP I+  TT QW  +ETWVYS++  QME+NNN+   NNNI HQ C L+PLEDDHIE
Sbjct: 121 SGSPPPIITGATTSQWASDETWVYSNKGDQMEMNNNNNNYNNNIHHQQCQLEPLEDDHIE 180

Query: 181 QMIQELLDLGPFEIIT 184
           QMIQELLDLG FEIIT
Sbjct: 181 QMIQELLDLGSFEIIT 196

[Close]
BLAST of Carg13510 vs. ExPASy TrEMBL
Match: A0A6J1GPQ0 (ethylene-responsive transcription factor ERF003-like OS=Cucurbita moschata OX=3662 GN=LOC111456403 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 2.0e-71
Identity = 151/191 (79.06%), Postives = 157/191 (82.20%), Query Frame = 0 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60

Query: 61  TNFQLNLNDQPSFSSSSN---LLSPALIAKLHKCHLASLQIAKKH-IHKQQPGFDLN--- 120
           TNFQ N NDQ S SSSS+   LLS  L+AKLHKCHLASLQIAKKH  HKQ PGF+ N   
Sbjct: 61  TNFQFNPNDQQSSSSSSSSSKLLSAPLMAKLHKCHLASLQIAKKHAAHKQHPGFEPNYAV 120

Query: 121 -GGPPPSISRTTTGQWPPEETWVYSDEAQMEINNNDNNNIPHQPCLQPLEDDHIEQMIQE 180
            GGP PSIS+TTT +W  EET       Q+E  NNDNNNI HQ CLQPLEDD IEQMIQE
Sbjct: 121 YGGPSPSISQTTTHRWRQEET-------QIE-TNNDNNNIHHQQCLQPLEDDDIEQMIQE 180

Query: 181 LLDLGPFEIIT 184
           LLDLG FEIIT
Sbjct: 181 LLDLGSFEIIT 183

[Close]
BLAST of Carg13510 vs. TAIR 10
Match: AT5G25190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 181.4 bits (459), Expect = 6.5e-46
Identity = 107/181 (59.12%), Postives = 120/181 (66.30%), Query Frame = 0 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60
           MARPQQR+RGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGP+AR
Sbjct: 1   MARPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFQLNLNDQPSFSSSSNLLSPALIAKLHKCHLASLQIAKKHIHKQQPGFDLNGGPPPSI 120
           TNF  N N  P  +SSS LLS  L AKLHKC++ASLQ+ K+   + Q           S 
Sbjct: 61  TNFPYNPNAIP--TSSSKLLSATLTAKLHKCYMASLQMTKQTQTQTQT------QTARSQ 120

Query: 121 SRTTTGQWPPEETWVYSDEAQMEINNNDNNNIPHQPCLQPLEDDHIEQMIQELLDLGPFE 180
           S  + G    E           EI   D  N   Q   +PLE+DHIEQMI+ELL  G  E
Sbjct: 121 SADSDGVTANESHLNRGVTETTEIKWED-GNANMQQNFRPLEEDHIEQMIEELLHYGSIE 172

Query: 181 I 182
           +
Sbjct: 181 L 172

[Close]
BLAST of Carg13510 vs. TAIR 10
Match: AT1G15360.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 115.9 bits (289), Expect = 3.3e-26
Identity = 62/101 (61.39%), Postives = 71/101 (70.30%), Query Frame = 0 

Query: 6   QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFQL 65
           +++RGVRQRHWGSWV+EIRHPLLK RIWLGTFETAE+AARAYDEAA LM G  A+TNF L
Sbjct: 5   KKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPL 64

Query: 66  NLND---------------QPSFSSSSNLLSPALIAKLHKC 92
           N N+                 S S+SS+ LS  L AKL KC
Sbjct: 65  NNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKC 105

[Close]
BLAST of Carg13510 vs. TAIR 10
Match: AT5G25390.2 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 102.4 bits (254), Expect = 3.8e-22
Identity = 51/84 (60.71%), Postives = 63/84 (75.00%), Query Frame = 0 

Query: 6  QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFQ- 65
          +++RGVRQR WGSWVSEIRHPLLK R+WLGTF+TAE AARAYD+AA LM G  A+TNF  
Sbjct: 5  KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64

Query: 66 LNLNDQPSFSSSSNLLSPALIAKL 89
          +  N   S   +S L SP  +++L
Sbjct: 65 IKSNGSNSLEINSALRSPKSLSEL 88

[Close]
BLAST of Carg13510 vs. TAIR 10
Match: AT5G11190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 101.7 bits (252), Expect = 6.5e-22
Identity = 51/86 (59.30%), Postives = 66/86 (76.74%), Query Frame = 0 

Query: 6  QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFQL 65
          +++RGVRQR WGSWVSEIRHPLLK R+WLGTFETAE AARAYD+AA LM G  A+TNF +
Sbjct: 5  RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFPV 64

Query: 66 NLNDQPS---FSSSSNLLSPALIAKL 89
            +++ S      +S L+SP  +++L
Sbjct: 65 VKSEEGSDHVKDVNSPLMSPKSLSEL 90

[Close]
BLAST of Carg13510 vs. TAIR 10
Match: AT5G25390.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 93.6 bits (231), Expect = 1.8e-19
Identity = 49/84 (58.33%), Postives = 61/84 (72.62%), Query Frame = 0 

Query: 6  QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFQ- 65
          +++RGVRQR WGSWVSEIRHPLL   +WLGTF+TAE AARAYD+AA LM G  A+TNF  
Sbjct: 5  KKFRGVRQRQWGSWVSEIRHPLL---VWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64

Query: 66 LNLNDQPSFSSSSNLLSPALIAKL 89
          +  N   S   +S L SP  +++L
Sbjct: 65 IKSNGSNSLEINSALRSPKSLSEL 85

The following BLAST results are available for this feature:
BLAST of Carg13510 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6593370.11.2e-102100.00Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp.... [more]
XP_022959765.11.5e-10098.36ethylene-responsive transcription factor ERF003-like [Cucurbita moschata][more]
XP_023513557.11.1e-9596.17ethylene-responsive transcription factor ERF003-like [Cucurbita pepo subsp. pepo... [more]
XP_023004394.14.2e-9595.08ethylene-responsive transcription factor ERF003-like [Cucurbita maxima][more]
XP_038899890.11.4e-7985.48ethylene-responsive transcription factor ERF003-like [Benincasa hispida][more]
BLAST of Carg13510 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q94AW59.1e-4559.12Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 ... [more]
P161467.7e-3652.91Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1[more]
Q9XI334.7e-2561.39Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN... [more]
Q3E9585.4e-2160.71Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702... [more]
Q9LFN79.2e-2159.30Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702... [more]
BLAST of Carg13510 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1H7937.1e-10198.36ethylene-responsive transcription factor ERF003-like OS=Cucurbita moschata OX=36... [more]
A0A6J1KW572.0e-9595.08ethylene-responsive transcription factor ERF003-like OS=Cucurbita maxima OX=3661... [more]
A0A1S3CE503.6e-7675.25ethylene-responsive transcription factor ERF003-like OS=Cucumis melo OX=3656 GN=... [more]
A0A0A0KA122.0e-7477.04AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G432080 PE=... [more]
A0A6J1GPQ02.0e-7179.06ethylene-responsive transcription factor ERF003-like OS=Cucurbita moschata OX=36... [more]
BLAST of Carg13510 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G25190.16.5e-4659.12Integrase-type DNA-binding superfamily protein [more]
AT1G15360.13.3e-2661.39Integrase-type DNA-binding superfamily protein [more]
AT5G25390.23.8e-2260.71Integrase-type DNA-binding superfamily protein [more]
AT5G11190.16.5e-2259.30Integrase-type DNA-binding superfamily protein [more]
AT5G25390.11.8e-1958.33Integrase-type DNA-binding superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 8..19
score: 66.97
coord: 30..46
score: 70.91
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 7..70
e-value: 3.0E-41
score: 153.0
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 7..56
e-value: 7.3E-12
score: 45.3
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 7..64
score: 20.73171
IPR001471AP2/ERF domainCDDcd00018AP2coord: 6..64
e-value: 2.58871E-35
score: 116.217
IPR036955AP2/ERF domain superfamilyGENE3D3.30.730.10AP2/ERF domaincoord: 6..66
e-value: 3.4E-26
score: 93.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 106..130
NoneNo IPR availablePANTHERPTHR31194:SF48ETHYLENE RESPONSE FACTORcoord: 1..182
NoneNo IPR availablePANTHERPTHR31194SHN SHINE , DNA BINDING / TRANSCRIPTION FACTORcoord: 1..182
IPR016177DNA-binding domain superfamilySUPERFAMILY54171DNA-binding domaincoord: 7..66

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg13510-RACarg13510-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 DNA-binding transcription factor activity