Carg13481 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg13481
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein UPSTREAM OF FLC-like
Location	Carg_Chr08: 3030113 .. 3033068 (-)
RNA-Seq Expression	Carg13481
Synteny	Carg13481

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGGTGGAGAAGTTCGAAGACTTCATGTCGTTTATTTTCTTAGCCGGATGGGACACGTGGAGCAACCCCACCTCATCCGTGTTCATCATCTCCCCCGTCGCGGTGGCGTTTATCTTCGAGGTATCAACTTTGTTTTCTTCTTCGTACCAATCTAATTCATGTTAAGAATGGTTGGAGAAGAGTCCGATTCTTCTTCATATTATTATGGAGAGTCGTTACAATTCATTTGATAACCTTATTAGTCGATGAAACCGTAGGACTCTATGCTTCGTCAGAAAAGGAAGGGCATGATAGCTACTTTTTTCTCTGTCTAAGAGGATTATTAGTTACTCGTTGGATTTATTTGAGGCATTTACCATTAAGTGATTTATATGAATCATTACTATTTCTTTCATGGGGTTTCTCCATTATTCATCTATTTACGTATTTTAAAAATATAAAATCCATTTAAGTGCAAGTGCAATAACTGCACCAGGTACTATTTTTTGCTACGTCAAGTTTTTGAACTGAAATGCATCAATCCCTGCTATTAGTTCCTGCTCTCCAATCTCATTGGTTAATGATGCACGTAAGTACGATGGTATTGGGTTTTGGTATAAGAGTCATGGCCTTAACTTAGCCATGAAGTTGTGAGTTTCGAAGATGTAGTCAAAAGTGACTCAAGTGACTTTGTTCGAGCACTCCAGAGGAGTCGAGCCTTTATTAAGGGGAAGGTTGTGAGTTTCGAAGATTTAGTGTACTTTGTTCGAGGAGAGGATTATTGAGGATTGTTAGGAGAGAGTCTACATTGGAACTAGATATATATATATATATATACACAAAGTGAACAATATTTGTAATTTCTAACCGTTCATTAATGAAACGAGTTTTATTTATTGTGTGTGGTGAAGACGTAAAGAGATGGCTAGGGGAATTGAGAGGGAAGACGATGCCCGAAGCGTTCGCGTGGTCATACAAAAGGCAAGTCAAATTATTTTTAAAAAATAATATGAGAGAGAGAGAGAGAGAGAGGAGAATTAATTGGAGTGAGAAAATGCAGAAAGTACAGAGCAGGGTACGTTTGGCAAGATCTGGTGGATGACGATCTCATAACTCCAATTTCTGACAACGAATATGTTCTTCAAGGATCCCAATTATATCCCACTGCTTTTTTTGGTAATTTCTACTCGTGACCCTTTTTTTTTTTTTTTTCTTTTTTTTCTTCCCATTTTCTTCATGTTCATATCTTTTCCACAGATAATTCTCGCCTCTGTTCGTCCTCCTCGCACACAAAGGATTTGGATGCTTATGAAGATTCGGAGCGATCCACGGTGACCGACGACGGAGATTCCATGAAGGTTGAAGAACGGGCTAAGAACTTGGAGGTAGCCAAACAGGGAATTGCAGAACATACCATGCAGAAGGAAGGTAATGATCTTTCGTATGATATTGTCCCTTTTGAGTATGTATTCCTTACTTATAAACTTATATGATTAACCCATTAATTAGATATAAGGATGTTAATATTGTTTTGAAATTGTTGAATAGGTGAACCCATGTCAACAGTTTCATCGGCTTCGTCGTCATCGGAGCAACATGCATTTACAAAGAGCAAGAGCTACTCAAGTGGAGCTTCTACCATGCTTCGTCAATGGATTACGTGCGGGGCGATAGATACAGACGACTCCGTTTTGATCAAGAATCCATCGCCCAAAGATTCATCGTTGGAAAAACCTAAAAATGGCGCCGTGTTTTGTAGAGACGACAAGATGGGTGGCTCAGCCCGAGTTCAACGAAATTCTTGGGATGGGAACTTTGAGCTCTCCTGCCAACATAGCCAACAAAATTCTCGGTAATTTATAAACTTCAAGTCATAATTGTTAGGAATTACAAATTTCTACAATGATACGATATTGTTCACTTTAAGCATAAGCTATCATGGCTTTGCTCTCTCATGACTTTACTTTGGGCTTCCTCAAAAGGTTTTTACTTAAAAACCCATGATGATTCCCTAAATTAACCAAACGTGGACTCCCTCCCAACAATTCTCCCCTCGAACAAAGTACAACATAGAGCCTCTCTCGAGGCCTATGGAGCCCTCAAACATCCTCCCCTTAATCGAGGCTCAACTCCTTCTCTTGAGCCCTCGAACAAAATACACTCTTTGTTCGACACTTTAGTCACTTTTGACTACACATTCGAGGCTCACAATTATTTGTTCGACATTTGAGAATTCTACTGACATAACTAAGTTTAGAGCATGACTTTGATCACAATTGTTAGGATCGTACAACAACACACACTCAAGGCTAAAAATTTTATCTCACAGGAAGAGTTTGGATGATTCAAGGAAGAAGAGGCAGAAAGAGAGCGGTGGAGGAAAGGTGGCGGTGATTCACAAGCCAATGGCAGGACCGAACTGCTCGTAAGTTTGATAGATTTGATTTTGACGAAAATGGGTTTGAGTTTTCTTTCGTTTGTCAACGACAAAAAGTCAATGCAGGCTATGTGGGAAGAGTTTCAAGCCAGAGAAGATGCATTCACACATGAAATCGTGTAAGGGACTCAAGTCGTTGACCAAGACTGCTACGACATCGACAAAGTCAAAGTCAACCACAGCAAAATCTTCGGACAAGGAACTGGTTTCCACGTACCTGTTGACCAACTAGGACAGCTCTCCATGGAAGGAAGAAAGAAGGTGAAATATTGGGCCAAATATGAACTCAAATCAGTGTTTAATGAAACAGAATTTGGTTCATTTGATCATTGCCATGCAAACCCTCCAAGAGTAGTTCCTTTGCAGCCTCTTACTAAGCCATTCTGTTCATGCCACGCTTCCCCTTTTTTGAAGTATGTGAAATCTCAGTGTACTTAAATCAGTAGACCATTATTGTTCTTATGCCCTGTTGTTGTCCAAGATGGAATCAGCTTAAGGAATTCAAGGTTGCGTGTGCTTTAAGACTGCTCTGCCAA

mRNA sequence

ATGGAGGGTGGAGAAGTTCGAAGACTTCATGTCGTTTATTTTCTTAGCCGGATGGGACACGTGGAGCAACCCCACCTCATCCGTGTTCATCATCTCCCCCGTCGCGGTGGCGTTTATCTTCGAGACGTAAAGAGATGGCTAGGGGAATTGAGAGGGAAGACGATGCCCGAAGCAAAGTACAGAGCAGGGTACGTTTGGCAAGATCTGGTGGATGACGATCTCATAACTCCAATTTCTGACAACGAATATGTTCTTCAAGGATCCCAATTATATCCCACTGCTTTTTTTGATAATTCTCGCCTCTGTTCGTCCTCCTCGCACACAAAGGATTTGGATGCTTATGAAGATTCGGAGCGATCCACGGTGACCGACGACGGAGATTCCATGAAGGTTGAAGAACGGGCTAAGAACTTGGAGGTAGCCAAACAGGGAATTGCAGAACATACCATGCAGAAGGAAGGTGAACCCATGTCAACAGTTTCATCGGCTTCGTCGTCATCGGAGCAACATGCATTTACAAAGAGCAAGAGCTACTCAAGTGGAGCTTCTACCATGCTTCGTCAATGGATTACGTGCGGGGCGATAGATACAGACGACTCCGTTTTGATCAAGAATCCATCGCCCAAAGATTCATCGTTGGAAAAACCTAAAAATGGCGCCGTGTTTTGTAGAGACGACAAGATGGGTGGCTCAGCCCGAGTTCAACGAAATTCTTGGGATGGGAACTTTGAGCTCTCCTGCCAACATAGCCAACAAAATTCTCGGAAGAGTTTGGATGATTCAAGGAAGAAGAGGCAGAAAGAGAGCGGTGGAGGAAAGGTGGCGGTGATTCACAAGCCAATGGCAGGACCGAACTGCTCGCTATGTGGGAAGAGTTTCAAGCCAGAGAAGATGCATTCACACATGAAATCGTGTAAGGGACTCAAGTCGTTGACCAAGACTGCTACGACATCGACAAAGTCAAAGTCAACCACAGCAAAATCTTCGGACAAGGAACTGGTTTCCACGTACCTGTTGACCAACTAGGACAGCTCTCCATGGAAGGAAGAAAGAAGGTGAAATATTGGGCCAAATATGAACTCAAATCAGTGTTTAATGAAACAGAATTTGGTTCATTTGATCATTGCCATGCAAACCCTCCAAGAGTAGTTCCTTTGCAGCCTCTTACTAAGCCATTCTGTTCATGCCACGCTTCCCCTTTTTTGAAGTATGTGAAATCTCAGTGTACTTAAATCAGTAGACCATTATTGTTCTTATGCCCTGTTGTTGTCCAAGATGGAATCAGCTTAAGGAATTCAAGGTTGCGTGTGCTTTAAGACTGCTCTGCCAA

Coding sequence (CDS)

ATGGAGGGTGGAGAAGTTCGAAGACTTCATGTCGTTTATTTTCTTAGCCGGATGGGACACGTGGAGCAACCCCACCTCATCCGTGTTCATCATCTCCCCCGTCGCGGTGGCGTTTATCTTCGAGACGTAAAGAGATGGCTAGGGGAATTGAGAGGGAAGACGATGCCCGAAGCAAAGTACAGAGCAGGGTACGTTTGGCAAGATCTGGTGGATGACGATCTCATAACTCCAATTTCTGACAACGAATATGTTCTTCAAGGATCCCAATTATATCCCACTGCTTTTTTTGATAATTCTCGCCTCTGTTCGTCCTCCTCGCACACAAAGGATTTGGATGCTTATGAAGATTCGGAGCGATCCACGGTGACCGACGACGGAGATTCCATGAAGGTTGAAGAACGGGCTAAGAACTTGGAGGTAGCCAAACAGGGAATTGCAGAACATACCATGCAGAAGGAAGGTGAACCCATGTCAACAGTTTCATCGGCTTCGTCGTCATCGGAGCAACATGCATTTACAAAGAGCAAGAGCTACTCAAGTGGAGCTTCTACCATGCTTCGTCAATGGATTACGTGCGGGGCGATAGATACAGACGACTCCGTTTTGATCAAGAATCCATCGCCCAAAGATTCATCGTTGGAAAAACCTAAAAATGGCGCCGTGTTTTGTAGAGACGACAAGATGGGTGGCTCAGCCCGAGTTCAACGAAATTCTTGGGATGGGAACTTTGAGCTCTCCTGCCAACATAGCCAACAAAATTCTCGGAAGAGTTTGGATGATTCAAGGAAGAAGAGGCAGAAAGAGAGCGGTGGAGGAAAGGTGGCGGTGATTCACAAGCCAATGGCAGGACCGAACTGCTCGCTATGTGGGAAGAGTTTCAAGCCAGAGAAGATGCATTCACACATGAAATCGTGTAAGGGACTCAAGTCGTTGACCAAGACTGCTACGACATCGACAAAGTCAAAGTCAACCACAGCAAAATCTTCGGACAAGGAACTGGTTTCCACGTACCTGTTGACCAACTAG

Protein sequence

MEGGEVRRLHVVYFLSRMGHVEQPHLIRVHHLPRRGGVYLRDVKRWLGELRGKTMPEAKYRAGYVWQDLVDDDLITPISDNEYVLQGSQLYPTAFFDNSRLCSSSSHTKDLDAYEDSERSTVTDDGDSMKVEERAKNLEVAKQGIAEHTMQKEGEPMSTVSSASSSSEQHAFTKSKSYSSGASTMLRQWITCGAIDTDDSVLIKNPSPKDSSLEKPKNGAVFCRDDKMGGSARVQRNSWDGNFELSCQHSQQNSRKSLDDSRKKRQKESGGGKVAVIHKPMAGPNCSLCGKSFKPEKMHSHMKSCKGLKSLTKTATTSTKSKSTTAKSSDKELVSTYLLTN

Homology

[Close]

BLAST of Carg13481 vs. NCBI nr
Match: KAG7025690.1 (Protein UPSTREAM OF FLC, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 664.8 bits (1714), Expect = 3.9e-187
Identity = 341/341 (100.00%), Postives = 341/341 (100.00%), Query Frame = 0


Query: 1   MEGGEVRRLHVVYFLSRMGHVEQPHLIRVHHLPRRGGVYLRDVKRWLGELRGKTMPEAKY 60
           MEGGEVRRLHVVYFLSRMGHVEQPHLIRVHHLPRRGGVYLRDVKRWLGELRGKTMPEAKY
Sbjct: 1   MEGGEVRRLHVVYFLSRMGHVEQPHLIRVHHLPRRGGVYLRDVKRWLGELRGKTMPEAKY 60

Query: 61  RAGYVWQDLVDDDLITPISDNEYVLQGSQLYPTAFFDNSRLCSSSSHTKDLDAYEDSERS 120
           RAGYVWQDLVDDDLITPISDNEYVLQGSQLYPTAFFDNSRLCSSSSHTKDLDAYEDSERS
Sbjct: 61  RAGYVWQDLVDDDLITPISDNEYVLQGSQLYPTAFFDNSRLCSSSSHTKDLDAYEDSERS 120

Query: 121 TVTDDGDSMKVEERAKNLEVAKQGIAEHTMQKEGEPMSTVSSASSSSEQHAFTKSKSYSS 180
           TVTDDGDSMKVEERAKNLEVAKQGIAEHTMQKEGEPMSTVSSASSSSEQHAFTKSKSYSS
Sbjct: 121 TVTDDGDSMKVEERAKNLEVAKQGIAEHTMQKEGEPMSTVSSASSSSEQHAFTKSKSYSS 180

Query: 181 GASTMLRQWITCGAIDTDDSVLIKNPSPKDSSLEKPKNGAVFCRDDKMGGSARVQRNSWD 240
           GASTMLRQWITCGAIDTDDSVLIKNPSPKDSSLEKPKNGAVFCRDDKMGGSARVQRNSWD
Sbjct: 181 GASTMLRQWITCGAIDTDDSVLIKNPSPKDSSLEKPKNGAVFCRDDKMGGSARVQRNSWD 240

Query: 241 GNFELSCQHSQQNSRKSLDDSRKKRQKESGGGKVAVIHKPMAGPNCSLCGKSFKPEKMHS 300
           GNFELSCQHSQQNSRKSLDDSRKKRQKESGGGKVAVIHKPMAGPNCSLCGKSFKPEKMHS
Sbjct: 241 GNFELSCQHSQQNSRKSLDDSRKKRQKESGGGKVAVIHKPMAGPNCSLCGKSFKPEKMHS 300

Query: 301 HMKSCKGLKSLTKTATTSTKSKSTTAKSSDKELVSTYLLTN 342
           HMKSCKGLKSLTKTATTSTKSKSTTAKSSDKELVSTYLLTN
Sbjct: 301 HMKSCKGLKSLTKTATTSTKSKSTTAKSSDKELVSTYLLTN 341

[Close]

BLAST of Carg13481 vs. NCBI nr
Match: XP_022960426.1 (protein UPSTREAM OF FLC-like [Cucurbita moschata])

HSP 1 Score: 635.2 bits (1637), Expect = 3.3e-178
Identity = 330/348 (94.83%), Postives = 333/348 (95.69%), Query Frame = 0


Query: 1   MEGGEVRRLHVVYFLSRMGHVEQPHLIRVHHLPRRGGVYLRDVKRWLGELRGKTMPEA-- 60
           ME GEVRRLHVVYFLSRMGHVEQPHLIRVHHLPRRGGVYLRDVKRWLGELRGK MPEA  
Sbjct: 1   MESGEVRRLHVVYFLSRMGHVEQPHLIRVHHLPRRGGVYLRDVKRWLGELRGKAMPEAFA 60

Query: 61  -----KYRAGYVWQDLVDDDLITPISDNEYVLQGSQLYPTAFFDNSRLCSSSSHTKDLDA 120
                +YRAGYVWQDLVDDDLITPISDNEYVLQGSQLYPTAFFDNSRLCSSS+ TKDLDA
Sbjct: 61  WSYKRQYRAGYVWQDLVDDDLITPISDNEYVLQGSQLYPTAFFDNSRLCSSSTQTKDLDA 120

Query: 121 YEDSERSTVTDDGDSMKVEERAKNLEVAKQGIAEHTMQKEGEPMSTVSSASSSSEQHAFT 180
           YEDSERS VTDDGDSMKVEERAKNLEVAKQGI E TMQKEGEPMSTVSSASSSSEQHAFT
Sbjct: 121 YEDSERSMVTDDGDSMKVEERAKNLEVAKQGIVERTMQKEGEPMSTVSSASSSSEQHAFT 180

Query: 181 KSKSYSSGASTMLRQWITCGAIDTDDSVLIKNPSPKDSSLEKPKNGAVFCRDDKMGGSAR 240
           KSKSYSSGASTMLRQWITCGAIDTDDSVLIKNPSPKDSSLEKPKNGAVFCRDD+MGGSAR
Sbjct: 181 KSKSYSSGASTMLRQWITCGAIDTDDSVLIKNPSPKDSSLEKPKNGAVFCRDDEMGGSAR 240

Query: 241 VQRNSWDGNFELSCQHSQQNSRKSLDDSRKKRQKESGGGKVAVIHKPMAGPNCSLCGKSF 300
           VQRNSWDGN ELSCQHSQQNSRKSLDDSRKKRQKESGGGKVAV HKPMAGPNCSLCGKSF
Sbjct: 241 VQRNSWDGNLELSCQHSQQNSRKSLDDSRKKRQKESGGGKVAVTHKPMAGPNCSLCGKSF 300

Query: 301 KPEKMHSHMKSCKGLKSLTKTATTSTKSKSTTAKSSDKELVSTYLLTN 342
           KPEKMHSHMKSCKGLKSLTKTATTSTKSKSTTAKSSDKELVSTYLLTN
Sbjct: 301 KPEKMHSHMKSCKGLKSLTKTATTSTKSKSTTAKSSDKELVSTYLLTN 348

[Close]

BLAST of Carg13481 vs. NCBI nr
Match: XP_023514531.1 (protein UPSTREAM OF FLC-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 620.2 bits (1598), Expect = 1.1e-173
Identity = 327/356 (91.85%), Postives = 334/356 (93.82%), Query Frame = 0


Query: 1   MEGGEVRRLHVVYFLSRMGHVEQPHLIRVHHLPRRGGVYLRDVKRWLGELRGKTMPEA-- 60
           MEGGE+RRLHVVYFLSRMGHVEQPHLIRVHHLPRRGGVYLRDVKRWLGELRGK MPEA  
Sbjct: 1   MEGGEIRRLHVVYFLSRMGHVEQPHLIRVHHLPRRGGVYLRDVKRWLGELRGKAMPEAFA 60

Query: 61  -----KYRAGYVWQDLVDDDLITPISDNEYVLQGSQLYPTAFFDNSRLCSSSSHTKDLDA 120
                +YRAGYVWQDLVDDDLITPISDNEYVLQGSQLYPTAFFDNSRLCSSSSHTK+LDA
Sbjct: 61  WSYKRQYRAGYVWQDLVDDDLITPISDNEYVLQGSQLYPTAFFDNSRLCSSSSHTKNLDA 120

Query: 121 YEDSERSTVTDDGDSMKVEERAKNLEVAKQGIAEHTMQKEGEPMSTVSSAS----SSSEQ 180
           YEDSERSTVTDDGDSMKVEE+AKNLEVAKQGI E T+QKEG PMSTVSSAS    SSSEQ
Sbjct: 121 YEDSERSTVTDDGDSMKVEEQAKNLEVAKQGIVERTIQKEGGPMSTVSSASSSSASSSEQ 180

Query: 181 HAFTKSKSYSSGASTMLRQWITCGAIDTDDSVLIKNPSPKDSSLEKPKNGAVFCRDDKMG 240
           HAFTKSKSYSSGASTMLRQWITCGAIDTDDSVLIKNPSPKDSSLEKPKNGAVFCRDD+MG
Sbjct: 181 HAFTKSKSYSSGASTMLRQWITCGAIDTDDSVLIKNPSPKDSSLEKPKNGAVFCRDDEMG 240

Query: 241 GSARVQRNSWDGNFELSCQHSQQNSRKSLDDSRKKRQKESGGGKVAVIHKPMAGPNCSLC 300
           GSARVQRNSWDGN ELSCQHSQQNSRKSLDDSRKKRQKES GGKVAV HKPMAGPNCSLC
Sbjct: 241 GSARVQRNSWDGNLELSCQHSQQNSRKSLDDSRKKRQKESDGGKVAVTHKPMAGPNCSLC 300

Query: 301 GKSFKPEKMHSHMKSCKGLKSLTKTATTS----TKSKSTTAKSSDKELVSTYLLTN 342
           GKSFKPEKMHSHMKSCKGLKSLTKTATTS    +KSKSTTAKSSDKELVSTYLLTN
Sbjct: 301 GKSFKPEKMHSHMKSCKGLKSLTKTATTSRKSKSKSKSTTAKSSDKELVSTYLLTN 356

[Close]

BLAST of Carg13481 vs. NCBI nr
Match: XP_023004865.1 (protein UPSTREAM OF FLC-like [Cucurbita maxima])

HSP 1 Score: 591.7 bits (1524), Expect = 4.2e-165
Identity = 310/352 (88.07%), Postives = 324/352 (92.05%), Query Frame = 0


Query: 1   MEGGEVRRLHVVYFLSRMGHVEQPHLIRVHHLPRRGGVYLRDVKRWLGELRGKTMPEA-- 60
           MEGGE+RRLHVVYFLSRMGHVEQPHLIRVHHLPR GGVYLRDVKRWLGELRGK MP+A  
Sbjct: 1   MEGGEIRRLHVVYFLSRMGHVEQPHLIRVHHLPRHGGVYLRDVKRWLGELRGKAMPKAFA 60

Query: 61  -----KYRAGYVWQDLVDDDLITPISDNEYVLQGSQLYPTAFFDNSRLCSSSSHTKDLDA 120
                +YRAGYVWQDLVDDDLITPISDNEYVLQGSQLYPT+ FDNSRLCSSSS+ KDLDA
Sbjct: 61  WSYKRQYRAGYVWQDLVDDDLITPISDNEYVLQGSQLYPTSLFDNSRLCSSSSNRKDLDA 120

Query: 121 YEDSERSTVTDDGDSMKVEERAKNLEVAKQGIAEHTMQKEGEPMSTVSSAS----SSSEQ 180
           YEDSERSTVTDDGDSMKVEE+AKNLEVAK+GI EH+MQKEG PMSTVSSAS    SSSEQ
Sbjct: 121 YEDSERSTVTDDGDSMKVEEQAKNLEVAKKGIGEHSMQKEGGPMSTVSSASSSSASSSEQ 180

Query: 181 HAFTKSKSYSSGASTMLRQWITCGAIDTDDSVLIKNPSPKDSSLEKPKNGAVFCRDDKMG 240
           HAFTKSKSYSSGASTMLRQWITCGAIDTDDS+LIKNPSPKDS  +KPKN  VFCRD++MG
Sbjct: 181 HAFTKSKSYSSGASTMLRQWITCGAIDTDDSILIKNPSPKDSLSKKPKNDVVFCRDNEMG 240

Query: 241 GSARVQRNSWDGNFELSCQHSQQNSRKSLDDSRKKRQKESGGGKVAVIHKPMAGPNCSLC 300
           GSARVQRNSWDGN ELS QHSQQNSRK+LDDSRKKRQKESG GKVA+ HKPMAGPNCSLC
Sbjct: 241 GSARVQRNSWDGNLELSRQHSQQNSRKTLDDSRKKRQKESGRGKVAMTHKPMAGPNCSLC 300

Query: 301 GKSFKPEKMHSHMKSCKGLKSLTKTATTSTKSKSTTAKSSDKELVSTYLLTN 342
           GKSFKPEKMHSHMKSCKGLKSLTKT TTSTKSKST AKSSDKELVST LLTN
Sbjct: 301 GKSFKPEKMHSHMKSCKGLKSLTKTGTTSTKSKSTRAKSSDKELVSTCLLTN 352

[Close]

BLAST of Carg13481 vs. NCBI nr
Match: KAG6593343.1 (hypothetical protein SDJN03_12819, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 413.3 bits (1061), Expect = 2.0e-111
Identity = 239/341 (70.09%), Postives = 242/341 (70.97%), Query Frame = 0


Query: 1   MEGGEVRRLHVVYFLSRMGHVEQPHLIRVHHLPRRGGVYLRDVKRWLGELRGKTMPEAKY 60
           MEGGEVRRLHVVYFLSRMGHVEQPHLIRVHHLPRRGGVYLR                   
Sbjct: 9   MEGGEVRRLHVVYFLSRMGHVEQPHLIRVHHLPRRGGVYLR------------------- 68

Query: 61  RAGYVWQDLVDDDLITPISDNEYVLQGSQLYPTAFFDNSRLCSSSSHTKDLDAYEDSERS 120
                                               DNSRLCSSSSHTKDLDAYEDSERS
Sbjct: 69  ------------------------------------DNSRLCSSSSHTKDLDAYEDSERS 128

Query: 121 TVTDDGDSMKVEERAKNLEVAKQGIAEHTMQKEGEPMSTVSSASSSSEQHAFTKSKSYSS 180
           TVTDDGDSMKVEERAKNLE AKQGI E TMQKEGEPMSTVSSASSSS+QHAFTKSKSYSS
Sbjct: 129 TVTDDGDSMKVEERAKNLEAAKQGIVERTMQKEGEPMSTVSSASSSSKQHAFTKSKSYSS 188

Query: 181 GASTMLRQWITCGAIDTDDSVLIKNPSPKDSSLEKPKNGAVFCRDDKMGGSARVQRNSWD 240
           GASTMLRQWITCGAIDT+DSVLIKNPSPKDSSLEKPKNGAVFCRDD+MGGSAR       
Sbjct: 189 GASTMLRQWITCGAIDTNDSVLIKNPSPKDSSLEKPKNGAVFCRDDEMGGSAR------- 248

Query: 241 GNFELSCQHSQQNSRKSLDDSRKKRQKESGGGKVAVIHKPMAGPNCSLCGKSFKPEKMHS 300
                                            VAV HKPMAGPNCSLCGKSFKPEKMHS
Sbjct: 249 ---------------------------------VAVTHKPMAGPNCSLCGKSFKPEKMHS 254

Query: 301 HMKSCKGLKSLTKTATTSTKSKSTTAKSSDKELVSTYLLTN 342
           HMKSCKGLKSLTKTATTSTKSKSTTAKSSDKELVSTYLLTN
Sbjct: 309 HMKSCKGLKSLTKTATTSTKSKSTTAKSSDKELVSTYLLTN 254

[Close]

BLAST of Carg13481 vs. ExPASy Swiss-Prot
Match: Q9SYJ8 (Protein SOSEKI 1 OS=Arabidopsis thaliana OX=3702 GN=SOK1 PE=1 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.1e-43
Identity = 141/367 (38.42%), Postives = 193/367 (52.59%), Query Frame = 0


Query: 3   GGEVRRLHVVYFLSRMGHVEQPHLIRVHHLPRRGGVYLRDVKRWLGELRGKTMPEA---- 62
           GGEVRR+++VYFLSR GHV+ PHL+RVHHL  R GV+LRDVK+WL + RG  MP+A    
Sbjct: 7   GGEVRRVNLVYFLSRSGHVDHPHLLRVHHL-SRNGVFLRDVKKWLADARGDAMPDAFSWS 66

Query: 63  ---KYRAGYVWQDLVDDDLITPISDNEYVLQGSQLY---PTAFFDNSRLCSSSSHTKDLD 122
              +Y+ GYVWQDL+DDDLITPISDNEYVL+GS++    P   + N    +  +    +D
Sbjct: 67  CKRRYKNGYVWQDLLDDDLITPISDNEYVLKGSEILLSSPKEDYPNVEKKAWVTRNGGID 126

Query: 123 AYED-------------------SERSTVTDDGDSMKVEERAKNLEVAKQGIAEHTMQKE 182
           A E                    S+RST T    + +     +   + KQ     + Q++
Sbjct: 127 AEEKLQKLKLTSEKIQKESPVFCSQRSTATTSTVTEESTTNEEGFVLKKQDPKTVSGQRD 186

Query: 183 G--------EPMSTVSSASSSSEQHAFTKSKSYSS-GASTMLRQWITCGAIDTDDSVLIK 242
           G        +  S   S SS++   ++ K+KSYSS  AS +LR  + CG +DT+D+VL+ 
Sbjct: 187 GSTENGSGNDVESGRPSVSSTTSSSSYIKNKSYSSVRASHVLRNLMKCGGLDTNDAVLV- 246

Query: 243 NPSPKDSSLEKPKNGAVFCRDDKMGGSARVQRNSWDGNFELSCQHSQQNSRKSLDDS--- 302
                   L K ++GA         G A      W+        H Q N+RKS + +   
Sbjct: 247 -------PLNKSRSGAF--------GPA------WEDERRYQ-YHQQHNARKSFEGAWSG 306

Query: 303 -RKKRQKESGGGKVAVIHKPMAGPNCSLCGKSFKPEKMHSHMKSCKGLKSLTKTATTSTK 328
            + K   E    KVA   KP   P CS CGK FKPEKMHSHMK C+G+K+   +A     
Sbjct: 307 IKMKETIEFCKPKVAP-SKPSMAPLCSQCGKLFKPEKMHSHMKLCRGMKN--SSANNDLM 346

[Close]

BLAST of Carg13481 vs. ExPASy Swiss-Prot
Match: A0A2R6X6S3 (Protein SOSEKI OS=Marchantia polymorpha OX=3197 GN=SOK PE=1 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 5.2e-17
Identity = 45/91 (49.45%), Postives = 60/91 (65.93%), Query Frame = 0


Query: 8   RLHVVYFLSRMGHVEQPHLIRVHHLPRRGGVYLRDVKRWLGELRGKTMPEA-------KY 67
           ++ VVY+LSR G ++QPHLI V       G+YLRDVKR L  +RGK M ++        Y
Sbjct: 16  KVQVVYYLSRGGQLQQPHLIDVPVSTHSNGLYLRDVKRRLTSIRGKGMGDSFSWSCKRNY 75

Query: 68  RAGYVWQDLVDDDLITPISDNEYVLQGSQLY 92
           +  ++WQDL DDD I P+SD E VL+GS+LY
Sbjct: 76  KNNFIWQDLADDDKILPLSDGELVLKGSELY 106

[Close]

BLAST of Carg13481 vs. ExPASy Swiss-Prot
Match: A0A2K1J5A5 (Protein SOSEKI 3 OS=Physcomitrium patens OX=3218 GN=SOK3 PE=1 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 1.0e-12
Identity = 52/163 (31.90%), Postives = 86/163 (52.76%), Query Frame = 0


Query: 3   GGEVRRLHVVYFLSRMGHVEQPHLIRVHHLPRRGGVYLRDVKRWLGELRGKTMPEA---- 62
           G +   + V+Y LS  G +E PH+I VH+ P +GG+ LRDVK+ L  LRG  + ++    
Sbjct: 4   GEDSSSVQVLYQLSWDGKLEHPHMIEVHYPPNQGGLRLRDVKKRLTTLRGHGINDSFSWS 63

Query: 63  ---KYRAGYVWQDLVDDDLITPI-SDNEYVLQGSQLYPTAFFDNSRLCSSSSHTKDLDAY 122
               Y+  ++W DL DDD+I P+    EYVL+ S+L+ T  F N      S H+      
Sbjct: 64  SKRNYKNEFIWNDLCDDDVIQPLRGSGEYVLRASELFDT--FTNKPWEHPSKHS------ 123

Query: 123 EDSERSTVTDDGDSMKVEERAKNLEVAKQGIAEHTMQKEGEPM 158
            +  +S+ T   D++ +++   N+++    +A    Q  GE +
Sbjct: 124 NERMQSSRTMSVDNVTLQQGLINVKLHSGALAREDDQPSGEKL 158

[Close]

BLAST of Carg13481 vs. ExPASy Swiss-Prot
Match: Q9FJF5 (Protein SOSEKI 5 OS=Arabidopsis thaliana OX=3702 GN=SOK5 PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 2.2e-12
Identity = 56/172 (32.56%), Postives = 85/172 (49.42%), Query Frame = 0


Query: 7   RRLHVVYFLSRMGHVEQPHLIRVHHLPRRGGVYLRDVKRWLGELRGKTM-------PEAK 66
           R++ VVY+L R G ++ PH I V  L    G+YL+DV   L +LRGK M        +  
Sbjct: 45  RKVPVVYYLCRNGQLDHPHFIEV-TLSSHDGLYLKDVINRLNDLRGKGMASLYSWSSKRS 104

Query: 67  YRAGYVWQDLVDDDLITPISDNEYVLQGSQLYPTAFFDNSRLCSSSSHTKDLDAYEDSER 126
           Y+ G+VW DL +DD I P+   EYVL+GS++  +    N R    +S  +D  +    + 
Sbjct: 105 YKNGFVWHDLSEDDFIFPVQGQEYVLKGSEVLDSCLISNPRSLLETSSFRDPRSLNPDKN 164

Query: 127 STVTDDGDSMKVEERAKNLEVAKQGIAEHTMQK--EGEPMSTVSSASSSSEQ 170
           S      D   V  R +N   +   ++E+ + K  E    ST   A+ +S Q
Sbjct: 165 S----GDDIPAVINRRRNQSWSSIDLSEYKVYKATESSAESTQRLAADASTQ 211

[Close]

BLAST of Carg13481 vs. ExPASy Swiss-Prot
Match: Q8GY65 (Protein SOSEKI 4 OS=Arabidopsis thaliana OX=3702 GN=SOK4 PE=1 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 2.9e-12
Identity = 40/91 (43.96%), Postives = 54/91 (59.34%), Query Frame = 0


Query: 7   RRLHVVYFLSRMGHVEQPHLIRVHHLPRRGGVYLRDVKRWLGELRGKTM-------PEAK 66
           R + VVY+LSR G ++ PH I V  L    G+YL+DV   L +LRG  M        +  
Sbjct: 18  RIVPVVYYLSRNGRLDHPHFIEV-PLSSHNGLYLKDVINRLNDLRGNGMACLYSWSSKRT 77

Query: 67  YRAGYVWQDLVDDDLITPISDNEYVLQGSQL 91
           Y+ G+VW DL D+D I P+   EYVL+GSQ+
Sbjct: 78  YKNGFVWYDLSDEDFIFPVHGQEYVLKGSQI 107

[Close]

BLAST of Carg13481 vs. ExPASy TrEMBL
Match: A0A6J1H7K3 (protein UPSTREAM OF FLC-like OS=Cucurbita moschata OX=3662 GN=LOC111461160 PE=3 SV=1)

HSP 1 Score: 635.2 bits (1637), Expect = 1.6e-178
Identity = 330/348 (94.83%), Postives = 333/348 (95.69%), Query Frame = 0


Query: 1   MEGGEVRRLHVVYFLSRMGHVEQPHLIRVHHLPRRGGVYLRDVKRWLGELRGKTMPEA-- 60
           ME GEVRRLHVVYFLSRMGHVEQPHLIRVHHLPRRGGVYLRDVKRWLGELRGK MPEA  
Sbjct: 1   MESGEVRRLHVVYFLSRMGHVEQPHLIRVHHLPRRGGVYLRDVKRWLGELRGKAMPEAFA 60

Query: 61  -----KYRAGYVWQDLVDDDLITPISDNEYVLQGSQLYPTAFFDNSRLCSSSSHTKDLDA 120
                +YRAGYVWQDLVDDDLITPISDNEYVLQGSQLYPTAFFDNSRLCSSS+ TKDLDA
Sbjct: 61  WSYKRQYRAGYVWQDLVDDDLITPISDNEYVLQGSQLYPTAFFDNSRLCSSSTQTKDLDA 120

Query: 121 YEDSERSTVTDDGDSMKVEERAKNLEVAKQGIAEHTMQKEGEPMSTVSSASSSSEQHAFT 180
           YEDSERS VTDDGDSMKVEERAKNLEVAKQGI E TMQKEGEPMSTVSSASSSSEQHAFT
Sbjct: 121 YEDSERSMVTDDGDSMKVEERAKNLEVAKQGIVERTMQKEGEPMSTVSSASSSSEQHAFT 180

Query: 181 KSKSYSSGASTMLRQWITCGAIDTDDSVLIKNPSPKDSSLEKPKNGAVFCRDDKMGGSAR 240
           KSKSYSSGASTMLRQWITCGAIDTDDSVLIKNPSPKDSSLEKPKNGAVFCRDD+MGGSAR
Sbjct: 181 KSKSYSSGASTMLRQWITCGAIDTDDSVLIKNPSPKDSSLEKPKNGAVFCRDDEMGGSAR 240

Query: 241 VQRNSWDGNFELSCQHSQQNSRKSLDDSRKKRQKESGGGKVAVIHKPMAGPNCSLCGKSF 300
           VQRNSWDGN ELSCQHSQQNSRKSLDDSRKKRQKESGGGKVAV HKPMAGPNCSLCGKSF
Sbjct: 241 VQRNSWDGNLELSCQHSQQNSRKSLDDSRKKRQKESGGGKVAVTHKPMAGPNCSLCGKSF 300

Query: 301 KPEKMHSHMKSCKGLKSLTKTATTSTKSKSTTAKSSDKELVSTYLLTN 342
           KPEKMHSHMKSCKGLKSLTKTATTSTKSKSTTAKSSDKELVSTYLLTN
Sbjct: 301 KPEKMHSHMKSCKGLKSLTKTATTSTKSKSTTAKSSDKELVSTYLLTN 348

[Close]

BLAST of Carg13481 vs. ExPASy TrEMBL
Match: A0A6J1KVT1 (protein UPSTREAM OF FLC-like OS=Cucurbita maxima OX=3661 GN=LOC111498045 PE=3 SV=1)

HSP 1 Score: 591.7 bits (1524), Expect = 2.0e-165
Identity = 310/352 (88.07%), Postives = 324/352 (92.05%), Query Frame = 0


Query: 1   MEGGEVRRLHVVYFLSRMGHVEQPHLIRVHHLPRRGGVYLRDVKRWLGELRGKTMPEA-- 60
           MEGGE+RRLHVVYFLSRMGHVEQPHLIRVHHLPR GGVYLRDVKRWLGELRGK MP+A  
Sbjct: 1   MEGGEIRRLHVVYFLSRMGHVEQPHLIRVHHLPRHGGVYLRDVKRWLGELRGKAMPKAFA 60

Query: 61  -----KYRAGYVWQDLVDDDLITPISDNEYVLQGSQLYPTAFFDNSRLCSSSSHTKDLDA 120
                +YRAGYVWQDLVDDDLITPISDNEYVLQGSQLYPT+ FDNSRLCSSSS+ KDLDA
Sbjct: 61  WSYKRQYRAGYVWQDLVDDDLITPISDNEYVLQGSQLYPTSLFDNSRLCSSSSNRKDLDA 120

Query: 121 YEDSERSTVTDDGDSMKVEERAKNLEVAKQGIAEHTMQKEGEPMSTVSSAS----SSSEQ 180
           YEDSERSTVTDDGDSMKVEE+AKNLEVAK+GI EH+MQKEG PMSTVSSAS    SSSEQ
Sbjct: 121 YEDSERSTVTDDGDSMKVEEQAKNLEVAKKGIGEHSMQKEGGPMSTVSSASSSSASSSEQ 180

Query: 181 HAFTKSKSYSSGASTMLRQWITCGAIDTDDSVLIKNPSPKDSSLEKPKNGAVFCRDDKMG 240
           HAFTKSKSYSSGASTMLRQWITCGAIDTDDS+LIKNPSPKDS  +KPKN  VFCRD++MG
Sbjct: 181 HAFTKSKSYSSGASTMLRQWITCGAIDTDDSILIKNPSPKDSLSKKPKNDVVFCRDNEMG 240

Query: 241 GSARVQRNSWDGNFELSCQHSQQNSRKSLDDSRKKRQKESGGGKVAVIHKPMAGPNCSLC 300
           GSARVQRNSWDGN ELS QHSQQNSRK+LDDSRKKRQKESG GKVA+ HKPMAGPNCSLC
Sbjct: 241 GSARVQRNSWDGNLELSRQHSQQNSRKTLDDSRKKRQKESGRGKVAMTHKPMAGPNCSLC 300

Query: 301 GKSFKPEKMHSHMKSCKGLKSLTKTATTSTKSKSTTAKSSDKELVSTYLLTN 342
           GKSFKPEKMHSHMKSCKGLKSLTKT TTSTKSKST AKSSDKELVST LLTN
Sbjct: 301 GKSFKPEKMHSHMKSCKGLKSLTKTGTTSTKSKSTRAKSSDKELVSTCLLTN 352

[Close]

BLAST of Carg13481 vs. ExPASy TrEMBL
Match: A0A6J1CV58 (protein UPSTREAM OF FLC isoform X1 OS=Momordica charantia OX=3673 GN=LOC111014499 PE=3 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 1.2e-101
Identity = 236/413 (57.14%), Postives = 274/413 (66.34%), Query Frame = 0


Query: 2   EGGEVRRLHVVYFLSRMGHVEQPHLIRVHHLPRR-----GGVYLRDVKRWLGELRGKTMP 61
           +GGE+RR+H++YFLSRMGHVEQPHLIRVHHL         GV+LRDVKRWLGELRGK MP
Sbjct: 16  KGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAATATAVAGVFLRDVKRWLGELRGKEMP 75

Query: 62  EA-------KYRAGYVWQDLVDDDLITPISDNEYVLQGSQL--YPTAFFDNSRLCSSSSH 121
           EA       KY+ GYVWQDLVDDDLITP SDNEYVLQGSQ+  +P  F ++   CSSS  
Sbjct: 76  EAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYVLQGSQIIQFPXLFHNSGLTCSSSKQ 135

Query: 122 TKD----LDAYE------------------DSERSTVTDDGDSMKVEERAKN-LEVAKQG 181
            K+     D  E                  DSERSTVTDDGDS+KVEE  KN LE AKQG
Sbjct: 136 RKNSVFRSDELEPTRDFPAKLQMNGESPXCDSERSTVTDDGDSIKVEEETKNFLETAKQG 195

Query: 182 IA-------------------------EHTMQKEGEP-----MSTVSSASSSSEQHAFTK 241
           I                          +  M+KEG P     +S+ SS+SSSS   AFTK
Sbjct: 196 IGVEEIEGFNNQYSSLYEKLKEEKYIEKDKMEKEGGPTATSTVSSSSSSSSSSTHPAFTK 255

Query: 242 SKSYSSGASTMLRQWITCGAIDTDDSVLIKNPS-PKD--SSLEKPKNGAVFCRDDKMGGS 301
           SKSYSSGAS +LRQWITCGA+DT+D+VLIKN S  KD  +  EKPKN AV CRDD +GGS
Sbjct: 256 SKSYSSGASHVLRQWITCGAVDTNDTVLIKNRSAAKDPPNLPEKPKNDAVICRDDMLGGS 315

Query: 302 ARVQRNSWDGNFELSCQHSQQNSRKSLDDSRKKRQKESGGGKVA---VIHKPMAGPNCSL 342
           ARV R+SWDG  ++   ++QQNSRKS D+ RKKR KESGG KVA      K M GPNCS 
Sbjct: 316 ARVLRSSWDGQLDIHRHNNQQNSRKSFDELRKKRPKESGGRKVAAATAAFKAMGGPNCSQ 375

[Close]

BLAST of Carg13481 vs. ExPASy TrEMBL
Match: A0A6J1CUY7 (protein UPSTREAM OF FLC isoform X2 OS=Momordica charantia OX=3673 GN=LOC111014499 PE=3 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 1.2e-101
Identity = 236/413 (57.14%), Postives = 274/413 (66.34%), Query Frame = 0


Query: 2   EGGEVRRLHVVYFLSRMGHVEQPHLIRVHHLPRR-----GGVYLRDVKRWLGELRGKTMP 61
           +GGE+RR+H++YFLSRMGHVEQPHLIRVHHL         GV+LRDVKRWLGELRGK MP
Sbjct: 6   KGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAATATAVAGVFLRDVKRWLGELRGKEMP 65

Query: 62  EA-------KYRAGYVWQDLVDDDLITPISDNEYVLQGSQL--YPTAFFDNSRLCSSSSH 121
           EA       KY+ GYVWQDLVDDDLITP SDNEYVLQGSQ+  +P  F ++   CSSS  
Sbjct: 66  EAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYVLQGSQIIQFPXLFHNSGLTCSSSKQ 125

Query: 122 TKD----LDAYE------------------DSERSTVTDDGDSMKVEERAKN-LEVAKQG 181
            K+     D  E                  DSERSTVTDDGDS+KVEE  KN LE AKQG
Sbjct: 126 RKNSVFRSDELEPTRDFPAKLQMNGESPXCDSERSTVTDDGDSIKVEEETKNFLETAKQG 185

Query: 182 IA-------------------------EHTMQKEGEP-----MSTVSSASSSSEQHAFTK 241
           I                          +  M+KEG P     +S+ SS+SSSS   AFTK
Sbjct: 186 IGVEEIEGFNNQYSSLYEKLKEEKYIEKDKMEKEGGPTATSTVSSSSSSSSSSTHPAFTK 245

Query: 242 SKSYSSGASTMLRQWITCGAIDTDDSVLIKNPS-PKD--SSLEKPKNGAVFCRDDKMGGS 301
           SKSYSSGAS +LRQWITCGA+DT+D+VLIKN S  KD  +  EKPKN AV CRDD +GGS
Sbjct: 246 SKSYSSGASHVLRQWITCGAVDTNDTVLIKNRSAAKDPPNLPEKPKNDAVICRDDMLGGS 305

Query: 302 ARVQRNSWDGNFELSCQHSQQNSRKSLDDSRKKRQKESGGGKVA---VIHKPMAGPNCSL 342
           ARV R+SWDG  ++   ++QQNSRKS D+ RKKR KESGG KVA      K M GPNCS 
Sbjct: 306 ARVLRSSWDGQLDIHRHNNQQNSRKSFDELRKKRPKESGGRKVAAATAAFKAMGGPNCSQ 365

[Close]

BLAST of Carg13481 vs. ExPASy TrEMBL
Match: A0A1S3CE85 (uncharacterized protein LOC103499876 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499876 PE=3 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 1.6e-101
Identity = 236/400 (59.00%), Postives = 274/400 (68.50%), Query Frame = 0


Query: 3   GGEVRRLHVVYFLSRMGHVEQPHLIRVHHLP-RRGGVYLRDVKRWLGELRGKTMPEA--- 62
           GGE+R++H++YFLSRMGHVEQPHLIRVHHL    GGVYLRDVKRWLGELRGK MPEA   
Sbjct: 20  GGEIRKVHIIYFLSRMGHVEQPHLIRVHHLAGASGGVYLRDVKRWLGELRGKEMPEAFSW 79

Query: 63  ----KYRAGYVWQDLVDDDLITPISDNEYVLQGSQ-LYPTAFFDNSRLC---------SS 122
               KY+ GYVWQDLVDDDLITPISDNEYVLQGSQ ++P+  FD  +             
Sbjct: 80  SYKRKYKTGYVWQDLVDDDLITPISDNEYVLQGSQIIFPSTLFDTKKSLFREELELSEDF 139

Query: 123 SSHTKDLDAYE----DSERSTVTDDGDSMKVEER-AKNLE-VAKQGIAEHTMQKEGEPMS 182
           SS  +  +A +    DSERSTVTDDGDS+KVEE   KNLE   KQG+ E     E E   
Sbjct: 140 SSKLQQRNAEQSPPYDSERSTVTDDGDSVKVEEETTKNLERNPKQGVVEEEEVDEIEGFK 199

Query: 183 TVSSAS----------------------------SSSEQHAFTKSKSYSSGASTMLRQWI 242
           T  S+S                            SSS Q AFTKSKSYSSGAS + RQ I
Sbjct: 200 TQYSSSSLYAKLANNKKEKDKDKDLMGKEATSTVSSSSQPAFTKSKSYSSGASHVFRQLI 259

Query: 243 TC--GAIDTDDSVLIKNPSPKDSSLEKPKNGAVFCRDDKMGGSARVQRNSWD-GNFELSC 302
           TC  GA+DT+D+VL+KN SPKD  LEKPKN AV CRD+ +GGSARV  +SWD GN E+  
Sbjct: 260 TCGTGAVDTNDTVLVKNRSPKDPPLEKPKNDAVVCRDEVLGGSARVIGSSWDFGNLEI-- 319

Query: 303 QHSQQNSRKSLDDSRKKRQKESGGGKV--AVIHKPMAGPNCSLCGKSFKPEKMHSHMKSC 342
              +Q SR S+DD RKKR KE+G GKV  A  +KPMAGPNCSLCGK+F+PEKMHSHMKSC
Sbjct: 320 --RRQTSRTSVDDLRKKRPKENGNGKVTAATTYKPMAGPNCSLCGKTFRPEKMHSHMKSC 379

[Close]

BLAST of Carg13481 vs. TAIR 10
Match: AT1G05577.1 (Domain of unknown function (DUF966) )

HSP 1 Score: 178.7 bits (452), Expect = 7.8e-45
Identity = 141/367 (38.42%), Postives = 193/367 (52.59%), Query Frame = 0


Query: 3   GGEVRRLHVVYFLSRMGHVEQPHLIRVHHLPRRGGVYLRDVKRWLGELRGKTMPEA---- 62
           GGEVRR+++VYFLSR GHV+ PHL+RVHHL  R GV+LRDVK+WL + RG  MP+A    
Sbjct: 7   GGEVRRVNLVYFLSRSGHVDHPHLLRVHHL-SRNGVFLRDVKKWLADARGDAMPDAFSWS 66

Query: 63  ---KYRAGYVWQDLVDDDLITPISDNEYVLQGSQLY---PTAFFDNSRLCSSSSHTKDLD 122
              +Y+ GYVWQDL+DDDLITPISDNEYVL+GS++    P   + N    +  +    +D
Sbjct: 67  CKRRYKNGYVWQDLLDDDLITPISDNEYVLKGSEILLSSPKEDYPNVEKKAWVTRNGGID 126

Query: 123 AYED-------------------SERSTVTDDGDSMKVEERAKNLEVAKQGIAEHTMQKE 182
           A E                    S+RST T    + +     +   + KQ     + Q++
Sbjct: 127 AEEKLQKLKLTSEKIQKESPVFCSQRSTATTSTVTEESTTNEEGFVLKKQDPKTVSGQRD 186

Query: 183 G--------EPMSTVSSASSSSEQHAFTKSKSYSS-GASTMLRQWITCGAIDTDDSVLIK 242
           G        +  S   S SS++   ++ K+KSYSS  AS +LR  + CG +DT+D+VL+ 
Sbjct: 187 GSTENGSGNDVESGRPSVSSTTSSSSYIKNKSYSSVRASHVLRNLMKCGGLDTNDAVLV- 246

Query: 243 NPSPKDSSLEKPKNGAVFCRDDKMGGSARVQRNSWDGNFELSCQHSQQNSRKSLDDS--- 302
                   L K ++GA         G A      W+        H Q N+RKS + +   
Sbjct: 247 -------PLNKSRSGAF--------GPA------WEDERRYQ-YHQQHNARKSFEGAWSG 306

Query: 303 -RKKRQKESGGGKVAVIHKPMAGPNCSLCGKSFKPEKMHSHMKSCKGLKSLTKTATTSTK 328
            + K   E    KVA   KP   P CS CGK FKPEKMHSHMK C+G+K+   +A     
Sbjct: 307 IKMKETIEFCKPKVAP-SKPSMAPLCSQCGKLFKPEKMHSHMKLCRGMKN--SSANNDLM 346

[Close]

BLAST of Carg13481 vs. TAIR 10
Match: AT5G59790.1 (Domain of unknown function (DUF966) )

HSP 1 Score: 74.7 bits (182), Expect = 1.6e-13
Identity = 56/172 (32.56%), Postives = 85/172 (49.42%), Query Frame = 0


Query: 7   RRLHVVYFLSRMGHVEQPHLIRVHHLPRRGGVYLRDVKRWLGELRGKTM-------PEAK 66
           R++ VVY+L R G ++ PH I V  L    G+YL+DV   L +LRGK M        +  
Sbjct: 45  RKVPVVYYLCRNGQLDHPHFIEV-TLSSHDGLYLKDVINRLNDLRGKGMASLYSWSSKRS 104

Query: 67  YRAGYVWQDLVDDDLITPISDNEYVLQGSQLYPTAFFDNSRLCSSSSHTKDLDAYEDSER 126
           Y+ G+VW DL +DD I P+   EYVL+GS++  +    N R    +S  +D  +    + 
Sbjct: 105 YKNGFVWHDLSEDDFIFPVQGQEYVLKGSEVLDSCLISNPRSLLETSSFRDPRSLNPDKN 164

Query: 127 STVTDDGDSMKVEERAKNLEVAKQGIAEHTMQK--EGEPMSTVSSASSSSEQ 170
           S      D   V  R +N   +   ++E+ + K  E    ST   A+ +S Q
Sbjct: 165 S----GDDIPAVINRRRNQSWSSIDLSEYKVYKATESSAESTQRLAADASTQ 211

[Close]

BLAST of Carg13481 vs. TAIR 10
Match: AT3G46110.2 (Domain of unknown function (DUF966) )

HSP 1 Score: 74.3 bits (181), Expect = 2.1e-13
Identity = 40/91 (43.96%), Postives = 54/91 (59.34%), Query Frame = 0


Query: 7   RRLHVVYFLSRMGHVEQPHLIRVHHLPRRGGVYLRDVKRWLGELRGKTM-------PEAK 66
           R + VVY+LSR G ++ PH I V  L    G+YL+DV   L +LRG  M        +  
Sbjct: 18  RIVPVVYYLSRNGRLDHPHFIEV-PLSSHNGLYLKDVINRLNDLRGNGMACLYSWSSKRT 77

Query: 67  YRAGYVWQDLVDDDLITPISDNEYVLQGSQL 91
           Y+ G+VW DL D+D I P+   EYVL+GSQ+
Sbjct: 78  YKNGFVWYDLSDEDFIFPVHGQEYVLKGSQI 107

[Close]

BLAST of Carg13481 vs. TAIR 10
Match: AT3G46110.1 (Domain of unknown function (DUF966) )

HSP 1 Score: 74.3 bits (181), Expect = 2.1e-13
Identity = 40/91 (43.96%), Postives = 54/91 (59.34%), Query Frame = 0


Query: 7   RRLHVVYFLSRMGHVEQPHLIRVHHLPRRGGVYLRDVKRWLGELRGKTM-------PEAK 66
           R + VVY+LSR G ++ PH I V  L    G+YL+DV   L +LRG  M        +  
Sbjct: 18  RIVPVVYYLSRNGRLDHPHFIEV-PLSSHNGLYLKDVINRLNDLRGNGMACLYSWSSKRT 77

Query: 67  YRAGYVWQDLVDDDLITPISDNEYVLQGSQL 91
           Y+ G+VW DL D+D I P+   EYVL+GSQ+
Sbjct: 78  YKNGFVWYDLSDEDFIFPVHGQEYVLKGSQI 107

[Close]

BLAST of Carg13481 vs. TAIR 10
Match: AT2G28150.1 (Domain of unknown function (DUF966) )

HSP 1 Score: 69.3 bits (168), Expect = 6.7e-12
Identity = 63/217 (29.03%), Postives = 105/217 (48.39%), Query Frame = 0


Query: 5   EVRRLHVVYFLSRMGHVEQPHLIRVHHLPRRGGVYLRDVKRWLGELRGKTM-------PE 64
           +++++ +VY+LS+   +E PH + V  +    G+YLRDV   L  LRG+ M        +
Sbjct: 30  KIKKVQIVYYLSKNRQLEHPHFMEV-LISSPNGLYLRDVIERLNVLRGRGMASMYSWSSK 89

Query: 65  AKYRAGYVWQDLVDDDLITPISDNEYVLQGSQLYPTAFFDNSR--LCSSSSHTKDLDAYE 124
             YR G+VW DL +DDLI P + NEYVL+GS+L+  +  D+    +  ++ + K +    
Sbjct: 90  RSYRNGFVWHDLSEDDLILPANGNEYVLKGSELFDESNSDHFSPIVNLATQNMKQIVVEP 149

Query: 125 DSERSTVTDDGDSMKVEERAKNLEVAKQGIAEHTMQKEGEPMSTVSSASSSSEQHAFTKS 184
            S RS   DD  S       K       G  +H+ + +      + S SSS        +
Sbjct: 150 PSSRS--MDDSSSSSSMNNGK-------GTNKHSHEDDELSPPALRSVSSSGVSPDSRDA 209

Query: 185 KSYSSGASTMLRQWITCGAID----TDDSVLIKNPSP 209
           K+ SS      + + + G  D    TD++V  ++ +P
Sbjct: 210 KNSSSWCLAEYKVYKSEGLADASTQTDETVSGRSKTP 236

The following BLAST results are available for this feature:

BLAST of Carg13481 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7025690.1	3.9e-187	100.00	Protein UPSTREAM OF FLC, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022960426.1	3.3e-178	94.83	protein UPSTREAM OF FLC-like [Cucurbita moschata]	[more]
XP_023514531.1	1.1e-173	91.85	protein UPSTREAM OF FLC-like [Cucurbita pepo subsp. pepo]	[more]
XP_023004865.1	4.2e-165	88.07	protein UPSTREAM OF FLC-like [Cucurbita maxima]	[more]
KAG6593343.1	2.0e-111	70.09	hypothetical protein SDJN03_12819, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Carg13481 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SYJ8	1.1e-43	38.42	Protein SOSEKI 1 OS=Arabidopsis thaliana OX=3702 GN=SOK1 PE=1 SV=1	[more]
A0A2R6X6S3	5.2e-17	49.45	Protein SOSEKI OS=Marchantia polymorpha OX=3197 GN=SOK PE=1 SV=1	[more]
A0A2K1J5A5	1.0e-12	31.90	Protein SOSEKI 3 OS=Physcomitrium patens OX=3218 GN=SOK3 PE=1 SV=1	[more]
Q9FJF5	2.2e-12	32.56	Protein SOSEKI 5 OS=Arabidopsis thaliana OX=3702 GN=SOK5 PE=1 SV=1	[more]
Q8GY65	2.9e-12	43.96	Protein SOSEKI 4 OS=Arabidopsis thaliana OX=3702 GN=SOK4 PE=1 SV=1	[more]

BLAST of Carg13481 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H7K3	1.6e-178	94.83	protein UPSTREAM OF FLC-like OS=Cucurbita moschata OX=3662 GN=LOC111461160 PE=3 ...	[more]
A0A6J1KVT1	2.0e-165	88.07	protein UPSTREAM OF FLC-like OS=Cucurbita maxima OX=3661 GN=LOC111498045 PE=3 SV...	[more]
A0A6J1CV58	1.2e-101	57.14	protein UPSTREAM OF FLC isoform X1 OS=Momordica charantia OX=3673 GN=LOC11101449...	[more]
A0A6J1CUY7	1.2e-101	57.14	protein UPSTREAM OF FLC isoform X2 OS=Momordica charantia OX=3673 GN=LOC11101449...	[more]
A0A1S3CE85	1.6e-101	59.00	uncharacterized protein LOC103499876 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Carg13481 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G05577.1	7.8e-45	38.42	Domain of unknown function (DUF966)	[more]
AT5G59790.1	1.6e-13	32.56	Domain of unknown function (DUF966)	[more]
AT3G46110.2	2.1e-13	43.96	Domain of unknown function (DUF966)	[more]
AT3G46110.1	2.1e-13	43.96	Domain of unknown function (DUF966)	[more]
AT2G28150.1	6.7e-12	29.03	Domain of unknown function (DUF966)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010369	Protein SOSEKI	PFAM	PF06136	DUF966	coord: 10..131 e-value: 3.5E-26 score: 92.8
IPR010369	Protein SOSEKI	PANTHER	PTHR31083	UPSTREAM OF FLC PROTEIN (DUF966)	coord: 2..328
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 203..234
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 147..177
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 154..177
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 247..277
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 311..341
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 105..127
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 255..272
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 109..127
None	No IPR available	PANTHER	PTHR31083:SF5	F3F20.2 PROTEIN	coord: 2..328

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg13481-RA	Carg13481-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051258	protein polymerization
cellular_component	GO:0005886	plasma membrane