Carg13414 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg13414
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Photosystem II stability/assembly factor
Location	Carg_Chr08: 2684471 .. 2689156 (+)
RNA-Seq Expression	Carg13414
Synteny	Carg13414

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAATCACCCGCGAACGGGCTGAGAGAACTTCCTTCTGGATAATGTGAGAGATAAGAGGTCGACCAGCACTGCTCTGCTCCTTTCCTTCTCTCATTAATGGCGACTCTGCAACAACTCCTTAGACCTTCATGGTTCGCTTCCTCTTCTCCTCGCCATTCCTTCACCTCCCTCTCTCAACCTCAACTTCAGCCACGAACTGTTAATTCTGTCACCCCCAAAGCCTCAATTAAGAATTCTTCCATTAATCGCCGGGAGTTCGTCGCTGAAACGGCAGCCGCGGTTTCTCTCTCGCTCTCTCCGTTGATTGCTCCCGTAAAACCGGCGAAGTCTGAAGAAAATCTGTCGCAGTGGGAGAGACTTTACCTTCCCATAGATCCTGGTGTTGTCCTTCTCGACATTGCTTTTGTGCCCGACGATTTGAACCATGGTTAGTTCCGATAGCTTTGGTTCCTTTTTCTGCAGAAATCAACGAATAATGCTGGAGAATTTTGAGTTTGTTTTTGTTTTTCTACTACGAATTATTGTGTTTCGGAAACTCACTAGTCACAGCAATTAATTGTTGGAAACATCTGCAGTTTGGGAGGATTTGTACACTGAAAAGCTATTAGGCGGTACATTTGTTTGTTCAATTGTCTTATTTGGAGGCTTGAATTATGTTCTACATAAGTTAAGCTGGTCTTCATTTCCAATTATTTTAAAATCAGTTTCTTCATCAATAATTCTTTTGGGGGGTGGGGAGTTTGAGTGCTTACGGATTCTGTCAAGGCTTCTGAATGTTGTAATTTGTAATTTCTCGTTCGTCAGTTATGGTTTCAAGTTCTTTCCGCCAACATAATGCCACGAGAAACCATTTGACACTTTCAGCCCACTGCAGGTTTCCTTTTGGGGACACGGCAAACCATTTTAGAGACAAAAGATGGTGGAAGAACATGGGCTCCACGTTCAATCCCCTCAGCTGAAGAAGAAGACTTCAACTACCGATTTAATTCTATTAGCTTCCAAGGAAAGGAGGGATGGATCGTTGGAAAGCCTGCAATTCTGTTGTACACTTCGGATGCTGGAGAAAGCTGGGAAAGGATACCACTTAGTGCTCAGCTTCCTGGTGATATGGTAAACTACTAAATTATATAATCGATAAGGAATTCATTATACGGCAGTGCTTGAACTTTAGGTTCTATTTTCAGATGTTGCTATTTTATAGATTTTGCTTTATCCATTGTAGTTATAAGGCTCATTTACTATAGTTAAACATGGTGAGACCGTAAATAAGGGATTATTCAAAGCTCTAAATTAAGATGGAAATTTTGGTTCTTTTAACATATCTAGAGCTATAAATTGATCTGTTGTTTTCTGCCAGAAAGTGCTTTTATTTAACACTAGAGTGGTTGATTCTATTATAAAACTTCAGGTCTACATTAAAGCAACTGGAGAAAAAAGTGCTGAGATGGTTACTGATGAAGGTGCAATATATGTTACATCAAACAAGGGATATAATTGGAAGGCTGCAGTTCAGGAGACTGTTTCTGCCACTCTTAATAGGTGAGCTTCAGCAGGGGAAAATTTCCATTCTATTAGGTTTAAGATTAAAGATTCGTTGTTTGGAATTTAACCTTGAAATCATTCCGGAATAGTTGATAGGCTGATAACTGATGAGATTTGACTGGCAGCTTGTGGCAGGAAATCATGGGCCAGACTCCAATGTTCACTAGCTTAGCTCATTGAAAGAAAAAATTTAATCCCGATTAAGTGATGCTAATGTGGTTTTCTTGACCTTTTTCAGAACAGTTTCTAGTGGTATAAGTGGTGCAAGCTATTACACTGGAACCTTTAACACAGTAAATCGCTCTCCTGATGGGCGTTATGTAGCTGTTTCAAGTCGTGGTAACTTCTACCTCACTTGGGAGCCTGGCCAGGTTTAACTTTTATATTTCTCTCTCTATCTCTCTTCTTCTAACCGTGTTACTCTGAACTGGCTTACTCTGAACTTTTATATTTCATTAAATCTTGGCTTTATTTGCAAGATCAGCCATTCTGGCAGCCACATAATAGAGCTATTGCTAGGAGGATTCAAAACATGGGGTGGAGAGCTGATGGTGGTCTTTGGCTTCTTGTTCGTGGAGGAGGACTTTTTCTTAGTAAAGGGACAGGAGTAAGTGAAATCGATGACCGTTCCTTTGTGTTTCTACTTTCTAGTGAAGCCACCCTAATTGAAAATATGAAAAATGGTTTAGAGGTGCAATGTGGTTTCATTTTAACCCTTACCAAAAGCCATATCCCTCCTTTTACTAGTTACTCGAGCATTGAATATTGTTCAATAAGTTTTCATCTTAGACTTGGGGATGCATAGTAATCCGATGACGGAATCCTATAATCGCATTGCTTTTCAGATATATTATCATTAGAAACTTTTGTGGTTTTTTTTCTTAAACAAAATCATGAAAACGTCGTAAGTGAAAACTAATTTTTCATCTTATTCATCATTAACTTGAAACCAGAGGGCAAGTAAATTCTAAATTGTCATTCTATAGGTTATATCTATGCTGTTGCTTCCCAAAATTTCAGCTAGACCTCTCAGCCGACTCCCGACTCCTGTTAAATATTAACTGCTTGTTGAATTCATGATGTTTCTCATAACAGATAAGTGAGGATTTTGAAGAAGTTCCAGTTCAAAGCCGAGGATTTGGCATATTAGATGTTGGTTATCGTTCAAAGGTAAGTTCTTGAAAACTCCTGCTGATTTGCGATTGAGATAGAAATATCATATCTTTTAGTTATAAATAGATGAAATTGACCTTCTTGGAGGGGGTACTCAATGGATCTGGTTGATTTGTGTAGCAGATCAAATAAGGGAAGGGCCAGACAGAAGCCTAAAATATGATTATTTAGTTTTTCATTGACATGCTATATGTTGAACTGAAATATACAGTACTAAAAGTGCACTGTGCAGCACAAATTATTCATTCCAGCAAGTATGAATGAGAGAAAAACTAAAAGATTCATTTTTTAGAGAATCAGTTTGTGCATGAAATATAGCTGGAAAAGCCTCTGTTTTTGTGACGATGAGAAAAAAATGAATTGTTTTTCAGGCATTTTAATTAGCCTGGTGCATATTTATGAAATAAGGTATGGGTATGTTCCACATCTTCTTTGGAGTAGTTAGATTTCTCATTTAATCACATACCTTCCTGCAATTCTTAACGTGAGGAATGACGGTACTAACATAGAACTTGTACGATCTCGTGTTCATAATAAATAATTGCATTCTCCAAGATACCTTGAGCTTGTAGTCGGAAGTCATGTATATTTCGTGCGAAGTGTAGTGCATATCTCATCATCCCTTGGCAATGAATATATAATCTGTATGCTGAATTCGAAGACACATATCCTTTTACGACCTTACTTGAACAAGATCAGTTCTATAGGTTGTACATCTGTGTCGTTGAGTTCTAAAGATTCGTCATTTTGGATTTATCATAACCACCAGACAAAAACGAAGTCATCCCTTTACACAAAATCGATCGCCTTGGTGGATATGTTTGACAGTTTTTCTTGTTTTTGGTATGAGTTGTACAGGAAGAGGCTTGGGCAGCTGGAGGAAGTGGAGTACTTCTGAAAACTACAAATGGTGGCAAGACATGGACCCGTGATAAAGCAGCTGACAATATTGCGGCCAACCTATACTCTGTAAAGTGAGTATCACCATACTGTGAAATAAAGTCTGTTCCTTTATAAATTCTCTTTTTATGGCTCTCCCTTAGGTGAGTAATGTGTAAGAAGAAGAATCAGAGCTCTATTCCTTGCTTCTTCTTTTGGGGTGGGTTTGGGATGAATTTTGGAAGGTAAAAAATGTTTTTAACCTATTTGGAAAGCTCTTGTGTTGTTCAGTTTGATAATTGAAAATAATTCAAAAAAGTTTAAAAACACTTGAAGAATATTTCTTTCAAAAGTATATATAAAAAGGGGTGCCTTCAGTGTTCTTTCATTTTGAAAAGTCACAATCAATATGGCTGCAAACACAATGCAATTGTGCTATACTTCACCTTCACATATTCTCATATAATCAATCTATTTACATCTCCGCAGGTTTATAAACGATAAGAAAGGTTTTGTACTCGGAAATGACGGGGTGTTGCTTCAATATCTTGGTTGAACTTTGAGATTTTACTCGGTAATTAATGCCTCTTCCTTCTCTTCTTTGATTTTTCTTTTGCCATCTCAGGCTCTTGCTGTGTGTAAATGTAATTTTTTTAACCCTACATTCCAAACTGTTCTAAAATTATATGCAGAATATAAAAGCAGTAAAAGGGTAACCTTTAAGAACATGTATTATTTTGTTTCTTGAAATTTGTTAAACTCCAAAAATATTACAGAAAGGCTATTTATAAACTTTATTTTGTGTAGAGGCTGGTATTCGGGATTGCTTGAAAATCAAAATTTCCGTTTACTGCTTGATTATGTTGTAGGGTTACTGAATTGTTGCAACATTGTTCTAATTGCTGCATCAAAGATTCAGGTTTTGTCAGGTTTTGGCATGTTTCTTTTTCAGGTTACAGAATCAGATTTTATATGATGCTTGGGATGGAAATTTTGTATCATTAAATAACACAGCTTTGCGTTCTTGCTTTCGATGATGGGACGAGGTGCTAATGTTTCCCAGTTAAATATTTTCTTTTTTTTTCTTTTTT

mRNA sequence

AAAATCACCCGCGAACGGGCTGAGAGAACTTCCTTCTGGATAATGTGAGAGATAAGAGGTCGACCAGCACTGCTCTGCTCCTTTCCTTCTCTCATTAATGGCGACTCTGCAACAACTCCTTAGACCTTCATGGTTCGCTTCCTCTTCTCCTCGCCATTCCTTCACCTCCCTCTCTCAACCTCAACTTCAGCCACGAACTGTTAATTCTGTCACCCCCAAAGCCTCAATTAAGAATTCTTCCATTAATCGCCGGGAGTTCGTCGCTGAAACGGCAGCCGCGGTTTCTCTCTCGCTCTCTCCGTTGATTGCTCCCGTAAAACCGGCGAAGTCTGAAGAAAATCTGTCGCAGTGGGAGAGACTTTACCTTCCCATAGATCCTGGTGTTGTCCTTCTCGACATTGCTTTTGTGCCCGACGATTTGAACCATGGTTTCCTTTTGGGGACACGGCAAACCATTTTAGAGACAAAAGATGGTGGAAGAACATGGGCTCCACGTTCAATCCCCTCAGCTGAAGAAGAAGACTTCAACTACCGATTTAATTCTATTAGCTTCCAAGGAAAGGAGGGATGGATCGTTGGAAAGCCTGCAATTCTGTTGTACACTTCGGATGCTGGAGAAAGCTGGGAAAGGATACCACTTAGTGCTCAGCTTCCTGGTGATATGGTCTACATTAAAGCAACTGGAGAAAAAAGTGCTGAGATGGTTACTGATGAAGGTGCAATATATGTTACATCAAACAAGGGATATAATTGGAAGGCTGCAGTTCAGGAGACTGTTTCTGCCACTCTTAATAGAACAGTTTCTAGTGGTATAAGTGGTGCAAGCTATTACACTGGAACCTTTAACACAGTAAATCGCTCTCCTGATGGGCGTTATGTAGCTGTTTCAAGTCGTGGTAACTTCTACCTCACTTGGGAGCCTGGCCAGCCATTCTGGCAGCCACATAATAGAGCTATTGCTAGGAGGATTCAAAACATGGGGTGGAGAGCTGATGGTGGTCTTTGGCTTCTTGTTCGTGGAGGAGGACTTTTTCTTAGTAAAGGGACAGGAATAAGTGAGGATTTTGAAGAAGTTCCAGTTCAAAGCCGAGGATTTGGCATATTAGATGTTGGTTATCGTTCAAAGGAAGAGGCTTGGGCAGCTGGAGGAAGTGGAGTACTTCTGAAAACTACAAATGGTGGCAAGACATGGACCCGTGATAAAGCAGCTGACAATATTGCGGCCAACCTATACTCTGTAAAGTTTATAAACGATAAGAAAGGTTTTGTACTCGGAAATGACGGGGTGTTGCTTCAATATCTTGGTTGAACTTTGAGATTTTACTCGGTAATTAATGCCTCTTCCTTCTCTTCTTTGATTTTTCTTTTGCCATCTCAGGCTCTTGCTGTGTGTAAATGTAATTTTTTTAACCCTACATTCCAAACTGTTCTAAAATTATATGCAGAATATAAAAGCAGTAAAAGGGTAACCTTTAAGAACATGTATTATTTTGTTTCTTGAAATTTGTTAAACTCCAAAAATATTACAGAAAGGCTATTTATAAACTTTATTTTGTGTAGAGGCTGGTATTCGGGATTGCTTGAAAATCAAAATTTCCGTTTACTGCTTGATTATGTTGTAGGGTTACTGAATTGTTGCAACATTGTTCTAATTGCTGCATCAAAGATTCAGGTTTTGTCAGGTTTTGGCATGTTTCTTTTTCAGGTTACAGAATCAGATTTTATATGATGCTTGGGATGGAAATTTTGTATCATTAAATAACACAGCTTTGCGTTCTTGCTTTCGATGATGGGACGAGGTGCTAATGTTTCCCAGTTAAATATTTTCTTTTTTTTTCTTTTTT

Coding sequence (CDS)

ATGGCGACTCTGCAACAACTCCTTAGACCTTCATGGTTCGCTTCCTCTTCTCCTCGCCATTCCTTCACCTCCCTCTCTCAACCTCAACTTCAGCCACGAACTGTTAATTCTGTCACCCCCAAAGCCTCAATTAAGAATTCTTCCATTAATCGCCGGGAGTTCGTCGCTGAAACGGCAGCCGCGGTTTCTCTCTCGCTCTCTCCGTTGATTGCTCCCGTAAAACCGGCGAAGTCTGAAGAAAATCTGTCGCAGTGGGAGAGACTTTACCTTCCCATAGATCCTGGTGTTGTCCTTCTCGACATTGCTTTTGTGCCCGACGATTTGAACCATGGTTTCCTTTTGGGGACACGGCAAACCATTTTAGAGACAAAAGATGGTGGAAGAACATGGGCTCCACGTTCAATCCCCTCAGCTGAAGAAGAAGACTTCAACTACCGATTTAATTCTATTAGCTTCCAAGGAAAGGAGGGATGGATCGTTGGAAAGCCTGCAATTCTGTTGTACACTTCGGATGCTGGAGAAAGCTGGGAAAGGATACCACTTAGTGCTCAGCTTCCTGGTGATATGGTCTACATTAAAGCAACTGGAGAAAAAAGTGCTGAGATGGTTACTGATGAAGGTGCAATATATGTTACATCAAACAAGGGATATAATTGGAAGGCTGCAGTTCAGGAGACTGTTTCTGCCACTCTTAATAGAACAGTTTCTAGTGGTATAAGTGGTGCAAGCTATTACACTGGAACCTTTAACACAGTAAATCGCTCTCCTGATGGGCGTTATGTAGCTGTTTCAAGTCGTGGTAACTTCTACCTCACTTGGGAGCCTGGCCAGCCATTCTGGCAGCCACATAATAGAGCTATTGCTAGGAGGATTCAAAACATGGGGTGGAGAGCTGATGGTGGTCTTTGGCTTCTTGTTCGTGGAGGAGGACTTTTTCTTAGTAAAGGGACAGGAATAAGTGAGGATTTTGAAGAAGTTCCAGTTCAAAGCCGAGGATTTGGCATATTAGATGTTGGTTATCGTTCAAAGGAAGAGGCTTGGGCAGCTGGAGGAAGTGGAGTACTTCTGAAAACTACAAATGGTGGCAAGACATGGACCCGTGATAAAGCAGCTGACAATATTGCGGCCAACCTATACTCTGTAAAGTTTATAAACGATAAGAAAGGTTTTGTACTCGGAAATGACGGGGTGTTGCTTCAATATCTTGGTTGA

Protein sequence

MATLQQLLRPSWFASSSPRHSFTSLSQPQLQPRTVNSVTPKASIKNSSINRREFVAETAAAVSLSLSPLIAPVKPAKSEENLSQWERLYLPIDPGVVLLDIAFVPDDLNHGFLLGTRQTILETKDGGRTWAPRSIPSAEEEDFNYRFNSISFQGKEGWIVGKPAILLYTSDAGESWERIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWRADGGLWLLVRGGGLFLSKGTGISEDFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKTTNGGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG

Homology

[Close]

BLAST of Carg13414 vs. NCBI nr
Match: KAG7025624.1 (Photosystem II stability/assembly factor, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 813.9 bits (2101), Expect = 6.1e-232
Identity = 403/403 (100.00%), Postives = 403/403 (100.00%), Query Frame = 0


Query: 1   MATLQQLLRPSWFASSSPRHSFTSLSQPQLQPRTVNSVTPKASIKNSSINRREFVAETAA 60
           MATLQQLLRPSWFASSSPRHSFTSLSQPQLQPRTVNSVTPKASIKNSSINRREFVAETAA
Sbjct: 1   MATLQQLLRPSWFASSSPRHSFTSLSQPQLQPRTVNSVTPKASIKNSSINRREFVAETAA 60

Query: 61  AVSLSLSPLIAPVKPAKSEENLSQWERLYLPIDPGVVLLDIAFVPDDLNHGFLLGTRQTI 120
           AVSLSLSPLIAPVKPAKSEENLSQWERLYLPIDPGVVLLDIAFVPDDLNHGFLLGTRQTI
Sbjct: 61  AVSLSLSPLIAPVKPAKSEENLSQWERLYLPIDPGVVLLDIAFVPDDLNHGFLLGTRQTI 120

Query: 121 LETKDGGRTWAPRSIPSAEEEDFNYRFNSISFQGKEGWIVGKPAILLYTSDAGESWERIP 180
           LETKDGGRTWAPRSIPSAEEEDFNYRFNSISFQGKEGWIVGKPAILLYTSDAGESWERIP
Sbjct: 121 LETKDGGRTWAPRSIPSAEEEDFNYRFNSISFQGKEGWIVGKPAILLYTSDAGESWERIP 180

Query: 181 LSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSGIS 240
           LSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSGIS
Sbjct: 181 LSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSGIS 240

Query: 241 GASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWRADG 300
           GASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWRADG
Sbjct: 241 GASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWRADG 300

Query: 301 GLWLLVRGGGLFLSKGTGISEDFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKTTN 360
           GLWLLVRGGGLFLSKGTGISEDFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKTTN
Sbjct: 301 GLWLLVRGGGLFLSKGTGISEDFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKTTN 360

Query: 361 GGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 404
           GGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG
Sbjct: 361 GGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 403

[Close]

BLAST of Carg13414 vs. NCBI nr
Match: XP_022959584.1 (photosystem II stability/assembly factor HCF136, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 812.0 bits (2096), Expect = 2.3e-231
Identity = 401/403 (99.50%), Postives = 403/403 (100.00%), Query Frame = 0


Query: 1   MATLQQLLRPSWFASSSPRHSFTSLSQPQLQPRTVNSVTPKASIKNSSINRREFVAETAA 60
           MAT+QQLLRPSWFASSSPRHSFTSLSQPQ+QPRTVNSVTPKASIKNSSINRREFVAETAA
Sbjct: 1   MATMQQLLRPSWFASSSPRHSFTSLSQPQVQPRTVNSVTPKASIKNSSINRREFVAETAA 60

Query: 61  AVSLSLSPLIAPVKPAKSEENLSQWERLYLPIDPGVVLLDIAFVPDDLNHGFLLGTRQTI 120
           AVSLSLSPLIAPVKPAKSEENLSQWERLYLPIDPGVVLLDIAFVPDDLNHGFLLGTRQTI
Sbjct: 61  AVSLSLSPLIAPVKPAKSEENLSQWERLYLPIDPGVVLLDIAFVPDDLNHGFLLGTRQTI 120

Query: 121 LETKDGGRTWAPRSIPSAEEEDFNYRFNSISFQGKEGWIVGKPAILLYTSDAGESWERIP 180
           LETKDGGRTWAPRSIPSAEEEDFNYRFNSISFQGKEGWIVGKPAILLYTSDAGESWERIP
Sbjct: 121 LETKDGGRTWAPRSIPSAEEEDFNYRFNSISFQGKEGWIVGKPAILLYTSDAGESWERIP 180

Query: 181 LSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSGIS 240
           LSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSGIS
Sbjct: 181 LSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSGIS 240

Query: 241 GASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWRADG 300
           GASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWRADG
Sbjct: 241 GASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWRADG 300

Query: 301 GLWLLVRGGGLFLSKGTGISEDFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKTTN 360
           GLWLLVRGGGLFLSKGTGISEDFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKTTN
Sbjct: 301 GLWLLVRGGGLFLSKGTGISEDFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKTTN 360

Query: 361 GGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 404
           GGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG
Sbjct: 361 GGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 403

[Close]

BLAST of Carg13414 vs. NCBI nr
Match: XP_023004561.1 (photosystem II stability/assembly factor HCF136, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 810.1 bits (2091), Expect = 8.8e-231
Identity = 400/403 (99.26%), Postives = 403/403 (100.00%), Query Frame = 0


Query: 1   MATLQQLLRPSWFASSSPRHSFTSLSQPQLQPRTVNSVTPKASIKNSSINRREFVAETAA 60
           MATLQQLLRPSWFASSSPRHSFTSLSQPQ+QP+TVNSVTPKASIKNSSINRREFVAETAA
Sbjct: 1   MATLQQLLRPSWFASSSPRHSFTSLSQPQVQPQTVNSVTPKASIKNSSINRREFVAETAA 60

Query: 61  AVSLSLSPLIAPVKPAKSEENLSQWERLYLPIDPGVVLLDIAFVPDDLNHGFLLGTRQTI 120
           AVSLSLSPLIAPVKPAKSEENLSQWERLYLPIDPGVVLLDIAFVPDDLNHGFLLGTRQTI
Sbjct: 61  AVSLSLSPLIAPVKPAKSEENLSQWERLYLPIDPGVVLLDIAFVPDDLNHGFLLGTRQTI 120

Query: 121 LETKDGGRTWAPRSIPSAEEEDFNYRFNSISFQGKEGWIVGKPAILLYTSDAGESWERIP 180
           LETKDGGRTWAPRSIPSAEEEDFNYRFNSISFQGKEGWIVGKPAILLYTSDAGESW+RIP
Sbjct: 121 LETKDGGRTWAPRSIPSAEEEDFNYRFNSISFQGKEGWIVGKPAILLYTSDAGESWDRIP 180

Query: 181 LSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSGIS 240
           LSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSGIS
Sbjct: 181 LSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSGIS 240

Query: 241 GASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWRADG 300
           GASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWRADG
Sbjct: 241 GASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWRADG 300

Query: 301 GLWLLVRGGGLFLSKGTGISEDFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKTTN 360
           GLWLLVRGGGLFLSKGTGISEDFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKTTN
Sbjct: 301 GLWLLVRGGGLFLSKGTGISEDFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKTTN 360

Query: 361 GGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 404
           GGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG
Sbjct: 361 GGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 403

[Close]

BLAST of Carg13414 vs. NCBI nr
Match: XP_023514720.1 (photosystem II stability/assembly factor HCF136, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 806.6 bits (2082), Expect = 9.7e-230
Identity = 401/403 (99.50%), Postives = 401/403 (99.50%), Query Frame = 0


Query: 1   MATLQQLLRPSWFASSSPRHSFTSLSQPQLQPRTVNSVTPKASIKNSSINRREFVAETAA 60
           MATLQQLLRPS FASSSPRHSFTSLSQPQLQPRTVNSVTPKASIKNSSINRREFVAETAA
Sbjct: 1   MATLQQLLRPSCFASSSPRHSFTSLSQPQLQPRTVNSVTPKASIKNSSINRREFVAETAA 60

Query: 61  AVSLSLSPLIAPVKPAKSEENLSQWERLYLPIDPGVVLLDIAFVPDDLNHGFLLGTRQTI 120
           AVSLSLSPLIAPVKPAKSEENLSQW RLYLPIDPGVVLLDIAFVPDDLNHGFLLGTRQTI
Sbjct: 61  AVSLSLSPLIAPVKPAKSEENLSQWARLYLPIDPGVVLLDIAFVPDDLNHGFLLGTRQTI 120

Query: 121 LETKDGGRTWAPRSIPSAEEEDFNYRFNSISFQGKEGWIVGKPAILLYTSDAGESWERIP 180
           LETKDGGRTWAPRSIPSAEEEDFNYRFNSISFQGKEGWIVGKPAILLYTSDAGESWERIP
Sbjct: 121 LETKDGGRTWAPRSIPSAEEEDFNYRFNSISFQGKEGWIVGKPAILLYTSDAGESWERIP 180

Query: 181 LSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSGIS 240
           LSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSGIS
Sbjct: 181 LSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSGIS 240

Query: 241 GASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWRADG 300
           GASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWRADG
Sbjct: 241 GASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWRADG 300

Query: 301 GLWLLVRGGGLFLSKGTGISEDFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKTTN 360
           GLWLLVRGGGLFLSKGTGISEDFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKTTN
Sbjct: 301 GLWLLVRGGGLFLSKGTGISEDFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKTTN 360

Query: 361 GGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 404
           GGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG
Sbjct: 361 GGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 403

[Close]

BLAST of Carg13414 vs. NCBI nr
Match: KAG6593273.1 (Photosystem II stability/assembly factor, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 785.4 bits (2027), Expect = 2.3e-223
Identity = 389/390 (99.74%), Postives = 389/390 (99.74%), Query Frame = 0


Query: 1   MATLQQLLRPSWFASSSPRHSFTSLSQPQLQPRTVNSVTPKASIKNSSINRREFVAETAA 60
           MATLQQLLRPSWFASSSPRHSFTSLSQPQLQPRTVNSVTPKASIKNSSINRREFVAETAA
Sbjct: 1   MATLQQLLRPSWFASSSPRHSFTSLSQPQLQPRTVNSVTPKASIKNSSINRREFVAETAA 60

Query: 61  AVSLSLSPLIAPVKPAKSEENLSQWERLYLPIDPGVVLLDIAFVPDDLNHGFLLGTRQTI 120
           AVSLSLSPLIAPVKPAKSEENLSQWERLYLPIDPGVVLLDIAFVPDDLNHGFLLGTRQTI
Sbjct: 61  AVSLSLSPLIAPVKPAKSEENLSQWERLYLPIDPGVVLLDIAFVPDDLNHGFLLGTRQTI 120

Query: 121 LETKDGGRTWAPRSIPSAEEEDFNYRFNSISFQGKEGWIVGKPAILLYTSDAGESWERIP 180
           LETKDGGRTWAPRSIPSAEEEDFNYRFNSISFQGKEGWIVGKPAILLYTSDAGESWERIP
Sbjct: 121 LETKDGGRTWAPRSIPSAEEEDFNYRFNSISFQGKEGWIVGKPAILLYTSDAGESWERIP 180

Query: 181 LSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSGIS 240
           LSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSGIS
Sbjct: 181 LSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSGIS 240

Query: 241 GASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWRADG 300
           GASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWRADG
Sbjct: 241 GASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWRADG 300

Query: 301 GLWLLVRGGGLFLSKGTGISEDFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKTTN 360
           GLWLLVRGGGLFLSKGTGISEDFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKTTN
Sbjct: 301 GLWLLVRGGGLFLSKGTGISEDFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKTTN 360

Query: 361 GGKTWTRDKAADNIAANLYSVKFINDKKGF 391
           GGKTWTRDKAADNIAANLYSVKFINDKK F
Sbjct: 361 GGKTWTRDKAADNIAANLYSVKFINDKKDF 390

[Close]

BLAST of Carg13414 vs. ExPASy Swiss-Prot
Match: O82660 (Photosystem II stability/assembly factor HCF136, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HCF136 PE=1 SV=1)

HSP 1 Score: 629.4 bits (1622), Expect = 2.8e-179
Identity = 306/392 (78.06%), Postives = 352/392 (89.80%), Query Frame = 0


Query: 15  SSSPRHSFTSLSQ---PQLQPRTVNSVTPKASIKNSSINRREFVAETAAAVSLSLSPLIA 74
           S SPR     +S    P+       S +P +S  + S +RRE + + +AAVSLSLS ++ 
Sbjct: 16  SVSPRFLSQRISHRLIPKASSSPPPSPSPSSSSSSLSFSRRELLYQ-SAAVSLSLSSIVG 75

Query: 75  PVKPAKSEENLSQWERLYLPIDPGVVLLDIAFVPDDLNHGFLLGTRQTILETKDGGRTWA 134
              PA+++E LS+WER++LPIDPGVVLLDIAFVPD+ + GFLLGTRQT+LETKDGG TW 
Sbjct: 76  ---PARADEQLSEWERVFLPIDPGVVLLDIAFVPDEPSRGFLLGTRQTLLETKDGGSTWN 135

Query: 135 PRSIPSAEEEDFNYRFNSISFQGKEGWIVGKPAILLYTSDAGESWERIPLSAQLPGDMVY 194
           PRSIPSAEEEDFNYRFNSISF+GKEGWI+GKPAILLYT+DAGE+W+RIPLS+QLPGDMV+
Sbjct: 136 PRSIPSAEEEDFNYRFNSISFKGKEGWIIGKPAILLYTADAGENWDRIPLSSQLPGDMVF 195

Query: 195 IKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSGISGASYYTGTFNT 254
           IKAT +KSAEMVTDEGAIYVTSN+GYNWKAA+QETVSATLNRTVSSGISGASYYTGTF+ 
Sbjct: 196 IKATEDKSAEMVTDEGAIYVTSNRGYNWKAAIQETVSATLNRTVSSGISGASYYTGTFSA 255

Query: 255 VNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWRADGGLWLLVRGGGL 314
           VNRSPDGRYVAVSSRGNF+LTWEPGQP+WQPHNRA+ARRIQNMGWRADGGLWLLVRGGGL
Sbjct: 256 VNRSPDGRYVAVSSRGNFFLTWEPGQPYWQPHNRAVARRIQNMGWRADGGLWLLVRGGGL 315

Query: 315 FLSKGTGISEDFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKTTNGGKTWTRDKAA 374
           +LSKGTGI+E+FEEVPVQSRGFGILDVGYRS+EEAWAAGGSG+LL+T NGGK+W RDKAA
Sbjct: 316 YLSKGTGITEEFEEVPVQSRGFGILDVGYRSEEEAWAAGGSGILLRTRNGGKSWNRDKAA 375

Query: 375 DNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 404
           DNIAANLY+VKF++DKKGFVLGNDGVLL+Y+G
Sbjct: 376 DNIAANLYAVKFVDDKKGFVLGNDGVLLRYVG 403

[Close]

BLAST of Carg13414 vs. ExPASy Swiss-Prot
Match: Q5Z5A8 (Photosystem II stability/assembly factor HCF136, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=HCF136 PE=3 SV=1)

HSP 1 Score: 622.9 bits (1605), Expect = 2.6e-177
Identity = 308/397 (77.58%), Postives = 339/397 (85.39%), Query Frame = 0


Query: 33  RTVNSVTPKASIKNSSINRREFVAETA-AAVSLSLSPLIAPVKP---AKSEENLSQWERL 92
           R    + P+A   + S  RR F+A+TA A+ + ++ PL+ P  P   A    +LS+WER+
Sbjct: 20  RRCRLLVPRAHTDSISTGRRRFIADTATASAAAAVGPLVLPRTPLARADQPPSLSEWERV 79

Query: 93  YLPIDPGVVLLDIAFVPDDLNHGFLLGTRQTILETKDGGRTWAPRSIPSAEEEDFNYRFN 152
            LPIDPGVVLLDIAFVPDD +HGFLLGTRQTILETK+GG TW PRSIPSAE+EDFNYRFN
Sbjct: 80  LLPIDPGVVLLDIAFVPDDPSHGFLLGTRQTILETKNGGNTWFPRSIPSAEDEDFNYRFN 139

Query: 153 SISFQGKEGWIVGKPAILLYTSDAGESWERIPLSAQLPGDMVYIKATGEKSAEMVTDEGA 212
           S+SF GKEGWI+GKPAILL+TSDAG+SWERIPLSAQLPG+MVYIKATGE+SAEMVTDEGA
Sbjct: 140 SVSFMGKEGWIIGKPAILLHTSDAGDSWERIPLSAQLPGNMVYIKATGEQSAEMVTDEGA 199

Query: 213 IYVTSNKGYNWKAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGN 272
           IYVTSN+GYNWKAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGN
Sbjct: 200 IYVTSNRGYNWKAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGN 259

Query: 273 FYLTWEPGQPFWQPHNRAIARRIQNMGWRADGGLWLLVRGGGLFLSKGTG---------- 332
           FYLTWEPGQPFWQPHNRA+ARRIQNMGWRADGGLWLLVRGGGLFLSKG+G          
Sbjct: 260 FYLTWEPGQPFWQPHNRAVARRIQNMGWRADGGLWLLVRGGGLFLSKGSGFQFFYRGLND 319

Query: 333 ------------ISEDFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKTTNGGKTWT 392
                       I+EDFEE  VQSRGFGILDVGYRSK+EAWAAGGSGVLLKTTNGGKTW 
Sbjct: 320 AHAISYLHPPNQITEDFEEASVQSRGFGILDVGYRSKDEAWAAGGSGVLLKTTNGGKTWV 379

Query: 393 RDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 404
           RDKAADNIAANLYSVKF+ D KG+VLGNDGVLL+Y+G
Sbjct: 380 RDKAADNIAANLYSVKFLGDNKGYVLGNDGVLLRYVG 416

[Close]

BLAST of Carg13414 vs. ExPASy Swiss-Prot
Match: Q9AW48 (Photosystem II stability/assembly factor HCF136, chloroplastic OS=Guillardia theta OX=55529 GN=hcf136 PE=3 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 1.3e-96
Identity = 168/362 (46.41%), Postives = 246/362 (67.96%), Query Frame = 0


Query: 49  INRREFVAETAAAVSLSLSPLIAPVKPAKSEENLSQWERLYLPIDPGVVLLDIAFVPDDL 108
           INR +F       ++  L P +  + P  +  N + W ++ LP+D   VL DI F   + 
Sbjct: 42  INRTKF-------INYLLYPTLTSLYPKFTHANTTSWTKVDLPVDS--VLFDIEFTDPEC 101

Query: 109 NHGFLLGTRQTILETKDGGRTWAPRSIPSAE-EEDFNYRFNSISFQGKEGWIVGKPAILL 168
            HG+L+G++ T LET DGG TW PR+  + + +E+  YRF +ISF+G+EGW++GKPAI+L
Sbjct: 102 KHGWLVGSKGTFLETDDGGNTWVPRTFANLDPDEELTYRFENISFEGQEGWVIGKPAIIL 161

Query: 169 YTSDAGESWERIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETV 228
           YT D G++W R+P+S +LPG+   IKA G +SAE+ T  GAIYVT+N G NWKA V+ET+
Sbjct: 162 YTKDGGKTWFRVPVSPKLPGEPCLIKALGSESAELTTTSGAIYVTNNAGRNWKAQVKETI 221

Query: 229 SATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAI 288
            +TLNRT+SSG+SGASY+TG    V R+ +G+Y+A+SSRGNFYLTWEPGQ FW P  R  
Sbjct: 222 DSTLNRTISSGVSGASYFTGNVINVIRNSEGKYLAISSRGNFYLTWEPGQDFWIPRARET 281

Query: 289 ARRIQNMGWRADG---GLWLLVRGGGLFLSKGT----GISE-DFEEVPVQSRGFGILDVG 348
           +RRIQ+MG+  +    G+W+  RGGGL +S        IS  +FE + +++ G+GILD  
Sbjct: 282 SRRIQSMGFIQNDNQKGIWMSTRGGGLSVSTKNFDFESISSFNFENIDIKTGGYGILDAA 341

Query: 349 YRSKEEAWAAGGSGVLLKTTNGGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLL 402
           + + ++ W   G G++  +T+ GK WT+    D ++ NLY +KF+N+ KGF+LG++G+LL
Sbjct: 342 FVNDKDIWIICGGGIVYNSTDKGKNWTKVDGIDKLSGNLYKIKFVNNNKGFILGSNGLLL 394

[Close]

BLAST of Carg13414 vs. ExPASy Swiss-Prot
Match: P73069 (Ycf48-like protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr2034 PE=3 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 4.6e-81
Identity = 155/318 (48.74%), Postives = 202/318 (63.52%), Query Frame = 0


Query: 85  WERLYLPIDPGVVLLDIAFVPDDLNHGFLLGTRQTILETKDGGRTWAPRSIPSAEEEDFN 144
           W+ + L  D      DIAF  +D NHG+L+GT++TI ET DGG TW  + I   EE+   
Sbjct: 40  WQEIALETDS--TFADIAFT-EDPNHGWLVGTKETIFETTDGGDTWEQKLIDLGEEK--- 99

Query: 145 YRFNSISFQGKEGWIVGKPAILLYTSDAGESWERIPLSAQLPGDMVYIKATGEKSAEMVT 204
             F+++SF G EGWI GKP+ILL+T+D G++W RIPLS +LPG    I A G ++AEM+T
Sbjct: 100 ASFSAVSFSGNEGWITGKPSILLHTTDGGQTWARIPLSEKLPGAPYSIIALGPQTAEMIT 159

Query: 205 DEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVS 264
           D GAIY T+N G NWKA V+  V                   G   T+ RS DGRYVAVS
Sbjct: 160 DLGAIYKTTNGGKNWKALVEGAV-------------------GVARTIQRSTDGRYVAVS 219

Query: 265 SRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWRADGGLWLLVRGGGLFLSKGTGISEDFE 324
           +RGNFY TW PGQ  W PHNR  +RR+Q MG+  DG LWLL RGG L  S      E  +
Sbjct: 220 ARGNFYSTWAPGQTEWTPHNRNSSRRLQTMGYGKDGQLWLLARGGQLQFSTDPDAEEWSD 279

Query: 325 EVPVQSRG-FGILDVGYRSKEEAWAAGGSGVLLKTTNGGKTWTRDKAADNIAANLYSVKF 384
            +  Q +G +G+LD+ +R+ EE W AG SG LL + +GG+TW +D   ++I ANLY V F
Sbjct: 280 VIAPQDKGSWGLLDLSFRTPEEVWVAGASGNLLMSQDGGQTWAKDTGVEDIPANLYRVVF 332

Query: 385 INDKKGFVLGNDGVLLQY 402
           ++ +KGFVLG DG+LL+Y
Sbjct: 340 LSPEKGFVLGQDGILLKY 332

[Close]

BLAST of Carg13414 vs. ExPASy Swiss-Prot
Match: Q8DI95 (Ycf48-like protein OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=tll1695 PE=1 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 1.7e-80
Identity = 151/343 (44.02%), Postives = 212/343 (61.81%), Query Frame = 0


Query: 62  VSLSLSPLIAPVKPAKSEENLSQWERLYLPIDPGVVLLDIAFVPDDLNHGFLLGTRQTIL 121
           VSLS   L  P        + + WE + LP      +LD++F+  D +HG+L+G   T++
Sbjct: 30  VSLSTPALAIPAL------DYNPWEAIQLPTT--ATILDMSFI--DRHHGWLVGVNATLM 89

Query: 122 ETKDGGRTWAPRSIPSAEEEDFNYRFNSISFQGKEGWIVGKPAILLYTSDAGESWERIPL 181
           ET+DGG+TW PR++     +  +YRFNS+SFQG EGWIVG+P I+L+T+D G+SW +IPL
Sbjct: 90  ETRDGGQTWEPRTLVL---DHSDYRFNSVSFQGNEGWIVGEPPIMLHTTDGGQSWSQIPL 149

Query: 182 SAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSGISG 241
             +LPG    IKA G  SAEM+T+ GAIY T + G NW+A VQE +              
Sbjct: 150 DPKLPGSPRLIKALGNGSAEMITNVGAIYRTKDSGKNWQALVQEAI-------------- 209

Query: 242 ASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWRADGG 301
                G    +NRSP G YVAVSSRG+FY TWEPGQ  W+PHNR  +RR+ NMG+  DG 
Sbjct: 210 -----GVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGR 269

Query: 302 LWLLVRGGGLFLSKGTGISEDFEEV--PVQSRGFGILDVGYRSKEEAWAAGGSGVLLKTT 361
           LW++V GG +  S     SE++ E+  P++    G LD+ YR+  E W AGG+G LL + 
Sbjct: 270 LWMIVNGGKIAFSDPDN-SENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGALLCSQ 329

Query: 362 NGGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYL 403
           +GG+TW +D     + +N Y + F +  +GF+LG  G+LL+Y+
Sbjct: 330 DGGQTWQQDVDVKKVPSNFYKILFFSPDQGFILGQKGILLRYV 339

[Close]

BLAST of Carg13414 vs. ExPASy TrEMBL
Match: A0A6J1H8H0 (Photosystem II stability/assembly factor OS=Cucurbita moschata OX=3662 GN=LOC111460613 PE=3 SV=1)

HSP 1 Score: 812.0 bits (2096), Expect = 1.1e-231
Identity = 401/403 (99.50%), Postives = 403/403 (100.00%), Query Frame = 0


Query: 1   MATLQQLLRPSWFASSSPRHSFTSLSQPQLQPRTVNSVTPKASIKNSSINRREFVAETAA 60
           MAT+QQLLRPSWFASSSPRHSFTSLSQPQ+QPRTVNSVTPKASIKNSSINRREFVAETAA
Sbjct: 1   MATMQQLLRPSWFASSSPRHSFTSLSQPQVQPRTVNSVTPKASIKNSSINRREFVAETAA 60

Query: 61  AVSLSLSPLIAPVKPAKSEENLSQWERLYLPIDPGVVLLDIAFVPDDLNHGFLLGTRQTI 120
           AVSLSLSPLIAPVKPAKSEENLSQWERLYLPIDPGVVLLDIAFVPDDLNHGFLLGTRQTI
Sbjct: 61  AVSLSLSPLIAPVKPAKSEENLSQWERLYLPIDPGVVLLDIAFVPDDLNHGFLLGTRQTI 120

Query: 121 LETKDGGRTWAPRSIPSAEEEDFNYRFNSISFQGKEGWIVGKPAILLYTSDAGESWERIP 180
           LETKDGGRTWAPRSIPSAEEEDFNYRFNSISFQGKEGWIVGKPAILLYTSDAGESWERIP
Sbjct: 121 LETKDGGRTWAPRSIPSAEEEDFNYRFNSISFQGKEGWIVGKPAILLYTSDAGESWERIP 180

Query: 181 LSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSGIS 240
           LSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSGIS
Sbjct: 181 LSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSGIS 240

Query: 241 GASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWRADG 300
           GASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWRADG
Sbjct: 241 GASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWRADG 300

Query: 301 GLWLLVRGGGLFLSKGTGISEDFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKTTN 360
           GLWLLVRGGGLFLSKGTGISEDFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKTTN
Sbjct: 301 GLWLLVRGGGLFLSKGTGISEDFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKTTN 360

Query: 361 GGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 404
           GGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG
Sbjct: 361 GGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 403

[Close]

BLAST of Carg13414 vs. ExPASy TrEMBL
Match: A0A6J1KSF8 (Photosystem II stability/assembly factor OS=Cucurbita maxima OX=3661 GN=LOC111497826 PE=3 SV=1)

HSP 1 Score: 810.1 bits (2091), Expect = 4.3e-231
Identity = 400/403 (99.26%), Postives = 403/403 (100.00%), Query Frame = 0


Query: 1   MATLQQLLRPSWFASSSPRHSFTSLSQPQLQPRTVNSVTPKASIKNSSINRREFVAETAA 60
           MATLQQLLRPSWFASSSPRHSFTSLSQPQ+QP+TVNSVTPKASIKNSSINRREFVAETAA
Sbjct: 1   MATLQQLLRPSWFASSSPRHSFTSLSQPQVQPQTVNSVTPKASIKNSSINRREFVAETAA 60

Query: 61  AVSLSLSPLIAPVKPAKSEENLSQWERLYLPIDPGVVLLDIAFVPDDLNHGFLLGTRQTI 120
           AVSLSLSPLIAPVKPAKSEENLSQWERLYLPIDPGVVLLDIAFVPDDLNHGFLLGTRQTI
Sbjct: 61  AVSLSLSPLIAPVKPAKSEENLSQWERLYLPIDPGVVLLDIAFVPDDLNHGFLLGTRQTI 120

Query: 121 LETKDGGRTWAPRSIPSAEEEDFNYRFNSISFQGKEGWIVGKPAILLYTSDAGESWERIP 180
           LETKDGGRTWAPRSIPSAEEEDFNYRFNSISFQGKEGWIVGKPAILLYTSDAGESW+RIP
Sbjct: 121 LETKDGGRTWAPRSIPSAEEEDFNYRFNSISFQGKEGWIVGKPAILLYTSDAGESWDRIP 180

Query: 181 LSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSGIS 240
           LSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSGIS
Sbjct: 181 LSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSGIS 240

Query: 241 GASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWRADG 300
           GASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWRADG
Sbjct: 241 GASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWRADG 300

Query: 301 GLWLLVRGGGLFLSKGTGISEDFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKTTN 360
           GLWLLVRGGGLFLSKGTGISEDFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKTTN
Sbjct: 301 GLWLLVRGGGLFLSKGTGISEDFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKTTN 360

Query: 361 GGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 404
           GGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG
Sbjct: 361 GGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 403

[Close]

BLAST of Carg13414 vs. ExPASy TrEMBL
Match: A0A5D3CGP8 (Photosystem II stability/assembly factor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G00160 PE=3 SV=1)

HSP 1 Score: 763.5 bits (1970), Expect = 4.6e-217
Identity = 381/408 (93.38%), Postives = 395/408 (96.81%), Query Frame = 0


Query: 1   MATL-QQLLRPSW----FASSSPRHSFTSLSQPQLQPRTVNSVTPKASIKNSSINRREFV 60
           MATL QQLL+PSW    FASSSPRH   SLSQPQL PRT++S +PKAS+ NSSINRR+FV
Sbjct: 1   MATLQQQLLKPSWTSSLFASSSPRH---SLSQPQLLPRTISSTSPKASLHNSSINRRQFV 60

Query: 61  AETAAAVSLSLSPLIAPVKPAKSEENLSQWERLYLPIDPGVVLLDIAFVPDDLNHGFLLG 120
           A+TAAAVSLSLSP IAPV+PAKSEE+LS+WERLYLPIDPGVVLLDIAFVPDDLNHGFLLG
Sbjct: 61  ADTAAAVSLSLSPFIAPVQPAKSEESLSEWERLYLPIDPGVVLLDIAFVPDDLNHGFLLG 120

Query: 121 TRQTILETKDGGRTWAPRSIPSAEEEDFNYRFNSISFQGKEGWIVGKPAILLYTSDAGES 180
           TRQTILETKDGGRTWAPRSIPSAEEEDFNYRFNSISF+GKEGWIVGKPAILLYTSDAGES
Sbjct: 121 TRQTILETKDGGRTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGES 180

Query: 181 WERIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTV 240
           WERIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTV
Sbjct: 181 WERIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTV 240

Query: 241 SSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMG 300
           SSGISGASYYTGTFNTVNRSPDG YVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMG
Sbjct: 241 SSGISGASYYTGTFNTVNRSPDGSYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMG 300

Query: 301 WRADGGLWLLVRGGGLFLSKGTGISEDFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVL 360
           WRADGGLWLLVRGGGLFLSKGTGISE+FEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVL
Sbjct: 301 WRADGGLWLLVRGGGLFLSKGTGISEEFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVL 360

Query: 361 LKTTNGGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 404
           LKTTNGG++WTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG
Sbjct: 361 LKTTNGGRSWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 405

[Close]

BLAST of Carg13414 vs. ExPASy TrEMBL
Match: A0A1S3CFV0 (Photosystem II stability/assembly factor OS=Cucumis melo OX=3656 GN=LOC103499970 PE=3 SV=1)

HSP 1 Score: 761.9 bits (1966), Expect = 1.3e-216
Identity = 380/408 (93.14%), Postives = 395/408 (96.81%), Query Frame = 0


Query: 1   MATL-QQLLRPSW----FASSSPRHSFTSLSQPQLQPRTVNSVTPKASIKNSSINRREFV 60
           MATL QQLL+PSW    FASSSPRH   SLSQPQL PRT++S +PKAS+ NSSINRR+FV
Sbjct: 1   MATLQQQLLKPSWTSSLFASSSPRH---SLSQPQLLPRTISSTSPKASLHNSSINRRQFV 60

Query: 61  AETAAAVSLSLSPLIAPVKPAKSEENLSQWERLYLPIDPGVVLLDIAFVPDDLNHGFLLG 120
           A+TAAAVSLSLSP IAPV+PAKSEE+LS+WERLYLPIDPGVVLLDIAFVPDDLNHGFLLG
Sbjct: 61  ADTAAAVSLSLSPFIAPVQPAKSEESLSEWERLYLPIDPGVVLLDIAFVPDDLNHGFLLG 120

Query: 121 TRQTILETKDGGRTWAPRSIPSAEEEDFNYRFNSISFQGKEGWIVGKPAILLYTSDAGES 180
           TRQTILETKDGGRTWAPRSIPSAEEEDFNYRFNSISF+GKEGWIVGKPAILLYTSDAGES
Sbjct: 121 TRQTILETKDGGRTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGES 180

Query: 181 WERIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTV 240
           WERIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTV
Sbjct: 181 WERIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTV 240

Query: 241 SSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMG 300
           SSGISGASYYTGTFNTVNRSPDG YVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMG
Sbjct: 241 SSGISGASYYTGTFNTVNRSPDGSYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMG 300

Query: 301 WRADGGLWLLVRGGGLFLSKGTGISEDFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVL 360
           WRADGGLWLLVRGGGLFLSKGTGISE+FEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVL
Sbjct: 301 WRADGGLWLLVRGGGLFLSKGTGISEEFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVL 360

Query: 361 LKTTNGGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 404
           LKTTNGG++WTRDKAADNIAANLYSVKFIN+KKGFVLGNDGVLLQYLG
Sbjct: 361 LKTTNGGRSWTRDKAADNIAANLYSVKFINEKKGFVLGNDGVLLQYLG 405

[Close]

BLAST of Carg13414 vs. ExPASy TrEMBL
Match: A0A0A0K5Y1 (Photosystem II stability/assembly factor OS=Cucumis sativus OX=3659 GN=Csa_7G420730 PE=3 SV=1)

HSP 1 Score: 760.4 bits (1962), Expect = 3.9e-216
Identity = 382/409 (93.40%), Postives = 395/409 (96.58%), Query Frame = 0


Query: 1   MATL-QQLLRPSW----FASS-SPRHSFTSLSQPQLQPRTVNSVTPKASIKNSSINRREF 60
           MATL QQLL+PSW    FASS SPRH   SLSQPQL PRT++S TPKAS+ NSSINRR F
Sbjct: 1   MATLQQQLLKPSWTSSLFASSTSPRH---SLSQPQLLPRTLSSTTPKASLHNSSINRRHF 60

Query: 61  VAETAAAVSLSLSPLIAPVKPAKSEENLSQWERLYLPIDPGVVLLDIAFVPDDLNHGFLL 120
           VA+TAAAVSLSLSP IAPV+PAKSEE+LS+WERLYLPIDPGVVLLDIAFVPDD+NHGFLL
Sbjct: 61  VADTAAAVSLSLSPFIAPVQPAKSEESLSEWERLYLPIDPGVVLLDIAFVPDDMNHGFLL 120

Query: 121 GTRQTILETKDGGRTWAPRSIPSAEEEDFNYRFNSISFQGKEGWIVGKPAILLYTSDAGE 180
           GTRQTILETKDGGRTWAPRSIPSAEEEDFNYRFNSISF+GKEGWIVGKPAILLYTSDAGE
Sbjct: 121 GTRQTILETKDGGRTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGE 180

Query: 181 SWERIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRT 240
           SWERIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRT
Sbjct: 181 SWERIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRT 240

Query: 241 VSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNM 300
           VSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNM
Sbjct: 241 VSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNM 300

Query: 301 GWRADGGLWLLVRGGGLFLSKGTGISEDFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGV 360
           GWRADGGLWLLVRGGGLFLSKGTGISE+FEEVPVQSRGFGILDVGYRSKEEAWAAGGSGV
Sbjct: 301 GWRADGGLWLLVRGGGLFLSKGTGISEEFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGV 360

Query: 361 LLKTTNGGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 404
           LLKTTNGG++WTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG
Sbjct: 361 LLKTTNGGRSWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 406

[Close]

BLAST of Carg13414 vs. TAIR 10
Match: AT5G23120.1 (photosystem II stability/assembly factor, chloroplast (HCF136) )

HSP 1 Score: 629.4 bits (1622), Expect = 2.0e-180
Identity = 306/392 (78.06%), Postives = 352/392 (89.80%), Query Frame = 0


Query: 15  SSSPRHSFTSLSQ---PQLQPRTVNSVTPKASIKNSSINRREFVAETAAAVSLSLSPLIA 74
           S SPR     +S    P+       S +P +S  + S +RRE + + +AAVSLSLS ++ 
Sbjct: 16  SVSPRFLSQRISHRLIPKASSSPPPSPSPSSSSSSLSFSRRELLYQ-SAAVSLSLSSIVG 75

Query: 75  PVKPAKSEENLSQWERLYLPIDPGVVLLDIAFVPDDLNHGFLLGTRQTILETKDGGRTWA 134
              PA+++E LS+WER++LPIDPGVVLLDIAFVPD+ + GFLLGTRQT+LETKDGG TW 
Sbjct: 76  ---PARADEQLSEWERVFLPIDPGVVLLDIAFVPDEPSRGFLLGTRQTLLETKDGGSTWN 135

Query: 135 PRSIPSAEEEDFNYRFNSISFQGKEGWIVGKPAILLYTSDAGESWERIPLSAQLPGDMVY 194
           PRSIPSAEEEDFNYRFNSISF+GKEGWI+GKPAILLYT+DAGE+W+RIPLS+QLPGDMV+
Sbjct: 136 PRSIPSAEEEDFNYRFNSISFKGKEGWIIGKPAILLYTADAGENWDRIPLSSQLPGDMVF 195

Query: 195 IKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSGISGASYYTGTFNT 254
           IKAT +KSAEMVTDEGAIYVTSN+GYNWKAA+QETVSATLNRTVSSGISGASYYTGTF+ 
Sbjct: 196 IKATEDKSAEMVTDEGAIYVTSNRGYNWKAAIQETVSATLNRTVSSGISGASYYTGTFSA 255

Query: 255 VNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWRADGGLWLLVRGGGL 314
           VNRSPDGRYVAVSSRGNF+LTWEPGQP+WQPHNRA+ARRIQNMGWRADGGLWLLVRGGGL
Sbjct: 256 VNRSPDGRYVAVSSRGNFFLTWEPGQPYWQPHNRAVARRIQNMGWRADGGLWLLVRGGGL 315

Query: 315 FLSKGTGISEDFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKTTNGGKTWTRDKAA 374
           +LSKGTGI+E+FEEVPVQSRGFGILDVGYRS+EEAWAAGGSG+LL+T NGGK+W RDKAA
Sbjct: 316 YLSKGTGITEEFEEVPVQSRGFGILDVGYRSEEEAWAAGGSGILLRTRNGGKSWNRDKAA 375

Query: 375 DNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 404
           DNIAANLY+VKF++DKKGFVLGNDGVLL+Y+G
Sbjct: 376 DNIAANLYAVKFVDDKKGFVLGNDGVLLRYVG 403

The following BLAST results are available for this feature:

BLAST of Carg13414 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7025624.1	6.1e-232	100.00	Photosystem II stability/assembly factor, chloroplastic [Cucurbita argyrosperma ...	[more]
XP_022959584.1	2.3e-231	99.50	photosystem II stability/assembly factor HCF136, chloroplastic-like [Cucurbita m...	[more]
XP_023004561.1	8.8e-231	99.26	photosystem II stability/assembly factor HCF136, chloroplastic-like [Cucurbita m...	[more]
XP_023514720.1	9.7e-230	99.50	photosystem II stability/assembly factor HCF136, chloroplastic-like [Cucurbita p...	[more]
KAG6593273.1	2.3e-223	99.74	Photosystem II stability/assembly factor, chloroplastic, partial [Cucurbita argy...	[more]

BLAST of Carg13414 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82660	2.8e-179	78.06	Photosystem II stability/assembly factor HCF136, chloroplastic OS=Arabidopsis th...	[more]
Q5Z5A8	2.6e-177	77.58	Photosystem II stability/assembly factor HCF136, chloroplastic OS=Oryza sativa s...	[more]
Q9AW48	1.3e-96	46.41	Photosystem II stability/assembly factor HCF136, chloroplastic OS=Guillardia the...	[more]
P73069	4.6e-81	48.74	Ycf48-like protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN...	[more]
Q8DI95	1.7e-80	44.02	Ycf48-like protein OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=t...	[more]

BLAST of Carg13414 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H8H0	1.1e-231	99.50	Photosystem II stability/assembly factor OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1KSF8	4.3e-231	99.26	Photosystem II stability/assembly factor OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]
A0A5D3CGP8	4.6e-217	93.38	Photosystem II stability/assembly factor OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3CFV0	1.3e-216	93.14	Photosystem II stability/assembly factor OS=Cucumis melo OX=3656 GN=LOC103499970...	[more]
A0A0A0K5Y1	3.9e-216	93.40	Photosystem II stability/assembly factor OS=Cucumis sativus OX=3659 GN=Csa_7G420...	[more]

BLAST of Carg13414 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G23120.1	2.0e-180	78.06	photosystem II stability/assembly factor, chloroplast (HCF136)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 76..297 e-value: 2.7E-8 score: 35.0
IPR016705	Photosynthesis system II assembly factor Ycf48/Hcf136	PIRSF	PIRSF017875	Photosystem_II_Ycf48-like	coord: 45..403 e-value: 3.6E-148 score: 490.7
IPR028203	Photosynthesis system II assembly factor Ycf48/Hcf136-like domain	PFAM	PF14870	PSII_BNR	coord: 80..401 e-value: 1.4E-124 score: 415.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..37
None	No IPR available	PANTHER	PTHR47199	PHOTOSYSTEM II STABILITY/ASSEMBLY FACTOR HCF136, CHLOROPLASTIC	coord: 43..403
None	No IPR available	SUPERFAMILY	110296	Oligoxyloglucan reducing end-specific cellobiohydrolase	coord: 90..402

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg13414-RA	Carg13414-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0005515	protein binding