Homology
BLAST of Carg13389 vs. NCBI nr
Match:
KAG7025599.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1537.3 bits (3979), Expect = 0.0e+00
Identity = 779/779 (100.00%), Postives = 779/779 (100.00%), Query Frame = 0
Query: 1 MASTPPHCSITTAKPYQTRQYPQNNLKNHQNPRQNGSWTTTHKVSLVKPLSPTPTHSATK 60
MASTPPHCSITTAKPYQTRQYPQNNLKNHQNPRQNGSWTTTHKVSLVKPLSPTPTHSATK
Sbjct: 1 MASTPPHCSITTAKPYQTRQYPQNNLKNHQNPRQNGSWTTTHKVSLVKPLSPTPTHSATK 60
Query: 61 STSTSTSTPLSQSPNFPSLCSLSSKSDLVSNFSGRRSTRCVSKYHNRRPKSSMATRHTAI 120
STSTSTSTPLSQSPNFPSLCSLSSKSDLVSNFSGRRSTRCVSKYHNRRPKSSMATRHTAI
Sbjct: 61 STSTSTSTPLSQSPNFPSLCSLSSKSDLVSNFSGRRSTRCVSKYHNRRPKSSMATRHTAI 120
Query: 121 AEEVLNQALQFGKDDTSLDNILLEFESHLCGSVDYTFLLRELGNRGECWKSIRCFEFALV 180
AEEVLNQALQFGKDDTSLDNILLEFESHLCGSVDYTFLLRELGNRGECWKSIRCFEFALV
Sbjct: 121 AEEVLNQALQFGKDDTSLDNILLEFESHLCGSVDYTFLLRELGNRGECWKSIRCFEFALV 180
Query: 181 REGRGNERGKLASAMISTLGRLGKVELAKGVFETALNQGYGNTVYAFSALISAYGKSGYF 240
REGRGNERGKLASAMISTLGRLGKVELAKGVFETALNQGYGNTVYAFSALISAYGKSGYF
Sbjct: 181 REGRGNERGKLASAMISTLGRLGKVELAKGVFETALNQGYGNTVYAFSALISAYGKSGYF 240
Query: 241 DQAIKVFESMKASGLKPNLVTYNAVIDACGKGGVEFKKVVEVFEEMLRNGVQPDRITYNS 300
DQAIKVFESMKASGLKPNLVTYNAVIDACGKGGVEFKKVVEVFEEMLRNGVQPDRITYNS
Sbjct: 241 DQAIKVFESMKASGLKPNLVTYNAVIDACGKGGVEFKKVVEVFEEMLRNGVQPDRITYNS 300
Query: 301 LLAACSRGGSWEAARNLLNEMVDRGIDQDIITYNTLLDAVCKGGQMNLAFEIMLEMPAKK 360
LLAACSRGGSWEAARNLLNEMVDRGIDQDIITYNTLLDAVCKGGQMNLAFEIMLEMPAKK
Sbjct: 301 LLAACSRGGSWEAARNLLNEMVDRGIDQDIITYNTLLDAVCKGGQMNLAFEIMLEMPAKK 360
Query: 361 ILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLRIGLDRVSYNTLLSIYAKLGRFEDAL 420
ILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLRIGLDRVSYNTLLSIYAKLGRFEDAL
Sbjct: 361 ILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLRIGLDRVSYNTLLSIYAKLGRFEDAL 420
Query: 421 NVCRKMGRSGVKKDVVTYNALLDGYGKQGKFNEVIRVFNEMKRDGVSPNLLTYSTLIDVY 480
NVCRKMGRSGVKKDVVTYNALLDGYGKQGKFNEVIRVFNEMKRDGVSPNLLTYSTLIDVY
Sbjct: 421 NVCRKMGRSGVKKDVVTYNALLDGYGKQGKFNEVIRVFNEMKRDGVSPNLLTYSTLIDVY 480
Query: 481 SKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPNV 540
SKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPNV
Sbjct: 481 SKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPNV 540
Query: 541 ITYNSIIDAFGRSTTEESLVEAVGAASESPSFIVMEGVDESEIESWVSDHVFKFYRQLVA 600
ITYNSIIDAFGRSTTEESLVEAVGAASESPSFIVMEGVDESEIESWVSDHVFKFYRQLVA
Sbjct: 541 ITYNSIIDAFGRSTTEESLVEAVGAASESPSFIVMEGVDESEIESWVSDHVFKFYRQLVA 600
Query: 601 EKEGPAKKERLGEEEIRSILRVFKKMHELEIKPNVVTFSAILNACSHCKSIEDASMLLEE 660
EKEGPAKKERLGEEEIRSILRVFKKMHELEIKPNVVTFSAILNACSHCKSIEDASMLLEE
Sbjct: 601 EKEGPAKKERLGEEEIRSILRVFKKMHELEIKPNVVTFSAILNACSHCKSIEDASMLLEE 660
Query: 661 LRLFDNQVYGVAHGLLMGFSENVWVQAQCLFDEVKQMDPSTAASFYNALTDMLWHLGQKR 720
LRLFDNQVYGVAHGLLMGFSENVWVQAQCLFDEVKQMDPSTAASFYNALTDMLWHLGQKR
Sbjct: 661 LRLFDNQVYGVAHGLLMGFSENVWVQAQCLFDEVKQMDPSTAASFYNALTDMLWHLGQKR 720
Query: 721 GAQLVVLEGKRRNVWETLWSDSCLDLHLMSSGAAHAMVHAWLLGIHSLVFNGHQLPKLL 780
GAQLVVLEGKRRNVWETLWSDSCLDLHLMSSGAAHAMVHAWLLGIHSLVFNGHQLPKLL
Sbjct: 721 GAQLVVLEGKRRNVWETLWSDSCLDLHLMSSGAAHAMVHAWLLGIHSLVFNGHQLPKLL 779
BLAST of Carg13389 vs. NCBI nr
Match:
XP_022960194.1 (pentatricopeptide repeat-containing protein At2g31400, chloroplastic-like [Cucurbita moschata])
HSP 1 Score: 1526.9 bits (3952), Expect = 0.0e+00
Identity = 774/779 (99.36%), Postives = 777/779 (99.74%), Query Frame = 0
Query: 1 MASTPPHCSITTAKPYQTRQYPQNNLKNHQNPRQNGSWTTTHKVSLVKPLSPTPTHSATK 60
MASTPPHCSITTAKPYQTRQYPQNNLKNHQNPRQNGSWTTTHKVSLVKPLSPTPTHSATK
Sbjct: 1 MASTPPHCSITTAKPYQTRQYPQNNLKNHQNPRQNGSWTTTHKVSLVKPLSPTPTHSATK 60
Query: 61 STSTSTSTPLSQSPNFPSLCSLSSKSDLVSNFSGRRSTRCVSKYHNRRPKSSMATRHTAI 120
STSTSTSTPLSQSPNFPSLCSLSSKSDLVSNFSGRRSTRCVSKYHNRRPKSSMATRHTAI
Sbjct: 61 STSTSTSTPLSQSPNFPSLCSLSSKSDLVSNFSGRRSTRCVSKYHNRRPKSSMATRHTAI 120
Query: 121 AEEVLNQALQFGKDDTSLDNILLEFESHLCGSVDYTFLLRELGNRGECWKSIRCFEFALV 180
AEEVLNQALQFGKDDTSLDNILLEFESHLCGSVDYTFLLRELGNRGECWKSIRCFEFALV
Sbjct: 121 AEEVLNQALQFGKDDTSLDNILLEFESHLCGSVDYTFLLRELGNRGECWKSIRCFEFALV 180
Query: 181 REGRGNERGKLASAMISTLGRLGKVELAKGVFETALNQGYGNTVYAFSALISAYGKSGYF 240
REGRGNERGKLASAMISTLGRLGKVELAKGVFETALNQGYGNTVYAFSALISAYGKSGYF
Sbjct: 181 REGRGNERGKLASAMISTLGRLGKVELAKGVFETALNQGYGNTVYAFSALISAYGKSGYF 240
Query: 241 DQAIKVFESMKASGLKPNLVTYNAVIDACGKGGVEFKKVVEVFEEMLRNGVQPDRITYNS 300
DQAIKVFESMKASGLKPNLVTYNAVIDACGKGGVEFKKVVEVFEEMLRNGVQPDRITYNS
Sbjct: 241 DQAIKVFESMKASGLKPNLVTYNAVIDACGKGGVEFKKVVEVFEEMLRNGVQPDRITYNS 300
Query: 301 LLAACSRGGSWEAARNLLNEMVDRGIDQDIITYNTLLDAVCKGGQMNLAFEIMLEMPAKK 360
LLAACSRGGSWEAA+NLLNEMVDRGIDQDIITYNTLLDAVCKGGQM+LAFEIMLEMPAKK
Sbjct: 301 LLAACSRGGSWEAAQNLLNEMVDRGIDQDIITYNTLLDAVCKGGQMDLAFEIMLEMPAKK 360
Query: 361 ILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLRIGLDRVSYNTLLSIYAKLGRFEDAL 420
ILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLRIGLDRVSYNTLLSIYAKLGRFEDAL
Sbjct: 361 ILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLRIGLDRVSYNTLLSIYAKLGRFEDAL 420
Query: 421 NVCRKMGRSGVKKDVVTYNALLDGYGKQGKFNEVIRVFNEMKRDGVSPNLLTYSTLIDVY 480
NVCR+MGRSGVKKDVVTYNALLDGYGKQGKFNEVIRVFNEMKRDGV PNLLTYSTLIDVY
Sbjct: 421 NVCREMGRSGVKKDVVTYNALLDGYGKQGKFNEVIRVFNEMKRDGVLPNLLTYSTLIDVY 480
Query: 481 SKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPNV 540
SKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPNV
Sbjct: 481 SKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPNV 540
Query: 541 ITYNSIIDAFGRSTTEESLVEAVGAASESPSFIVMEGVDESEIESWVSDHVFKFYRQLVA 600
ITYNSIIDAFGRSTTEESLVEAVGAASESPSFIVMEGVDESEIESWVSDHVFKFYRQLVA
Sbjct: 541 ITYNSIIDAFGRSTTEESLVEAVGAASESPSFIVMEGVDESEIESWVSDHVFKFYRQLVA 600
Query: 601 EKEGPAKKERLGEEEIRSILRVFKKMHELEIKPNVVTFSAILNACSHCKSIEDASMLLEE 660
EKEGPAKKERLGEEEIRSILRVFKKMHELEIKPNVVTFSAILNACS CKSIEDASMLLEE
Sbjct: 601 EKEGPAKKERLGEEEIRSILRVFKKMHELEIKPNVVTFSAILNACSRCKSIEDASMLLEE 660
Query: 661 LRLFDNQVYGVAHGLLMGFSENVWVQAQCLFDEVKQMDPSTAASFYNALTDMLWHLGQKR 720
LRLFDNQVYGVAHGLLMGFSENVWVQAQCLFDEVKQMDPSTAASFYNALTDMLWHLGQKR
Sbjct: 661 LRLFDNQVYGVAHGLLMGFSENVWVQAQCLFDEVKQMDPSTAASFYNALTDMLWHLGQKR 720
Query: 721 GAQLVVLEGKRRNVWETLWSDSCLDLHLMSSGAAHAMVHAWLLGIHSLVFNGHQLPKLL 780
GAQLVVLEGKRRNVWETLWSDSCLDLHLMSSGAAHAMVHAWLLGIHSLVFNGHQLPKLL
Sbjct: 721 GAQLVVLEGKRRNVWETLWSDSCLDLHLMSSGAAHAMVHAWLLGIHSLVFNGHQLPKLL 779
BLAST of Carg13389 vs. NCBI nr
Match:
KAG6593248.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1518.1 bits (3929), Expect = 0.0e+00
Identity = 774/783 (98.85%), Postives = 777/783 (99.23%), Query Frame = 0
Query: 1 MASTPPHCSITTAKPYQTRQYPQNNLKNHQNPRQNGSWTTTHKVSLVKPLSPTPTHSATK 60
MASTPPHCSITTAKPYQTRQYPQNNLKNHQNPRQNGSWTTTHKVSLVKPLSPTPTHSATK
Sbjct: 1210 MASTPPHCSITTAKPYQTRQYPQNNLKNHQNPRQNGSWTTTHKVSLVKPLSPTPTHSATK 1269
Query: 61 --STSTSTSTPLSQSPNFPSLCSL--SSKSDLVSNFSGRRSTRCVSKYHNRRPKSSMATR 120
STSTSTSTPLSQ+PNFPSLCSL SSKSDLVSNFSGRRSTRCVSKYHNRRPKSSMATR
Sbjct: 1270 STSTSTSTSTPLSQTPNFPSLCSLSSSSKSDLVSNFSGRRSTRCVSKYHNRRPKSSMATR 1329
Query: 121 HTAIAEEVLNQALQFGKDDTSLDNILLEFESHLCGSVDYTFLLRELGNRGECWKSIRCFE 180
HTAIAEEVLNQALQFGKDDTSLDNILLEFESHLCGSVDYTFLLRELGNRGECWKSIRCFE
Sbjct: 1330 HTAIAEEVLNQALQFGKDDTSLDNILLEFESHLCGSVDYTFLLRELGNRGECWKSIRCFE 1389
Query: 181 FALVREGRGNERGKLASAMISTLGRLGKVELAKGVFETALNQGYGNTVYAFSALISAYGK 240
FALVREGRGNERGKLASAMISTLGRLGKVELAKGVFETALNQGYGNTVYAFSALISAYGK
Sbjct: 1390 FALVREGRGNERGKLASAMISTLGRLGKVELAKGVFETALNQGYGNTVYAFSALISAYGK 1449
Query: 241 SGYFDQAIKVFESMKASGLKPNLVTYNAVIDACGKGGVEFKKVVEVFEEMLRNGVQPDRI 300
SGYFDQAIKVFESMKASGLKPNLVTYNAVIDACGKGGVEFKKV EVFEEMLRNGVQPDRI
Sbjct: 1450 SGYFDQAIKVFESMKASGLKPNLVTYNAVIDACGKGGVEFKKVAEVFEEMLRNGVQPDRI 1509
Query: 301 TYNSLLAACSRGGSWEAARNLLNEMVDRGIDQDIITYNTLLDAVCKGGQMNLAFEIMLEM 360
TYNSLLAACSRGGSWEAARNLLNEMVDRGIDQDIITYNTLLDAVCKGGQM+LAFEIMLEM
Sbjct: 1510 TYNSLLAACSRGGSWEAARNLLNEMVDRGIDQDIITYNTLLDAVCKGGQMDLAFEIMLEM 1569
Query: 361 PAKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLRIGLDRVSYNTLLSIYAKLGRF 420
PAKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLRIGLDRVSYNTLLSIYAKLGRF
Sbjct: 1570 PAKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLRIGLDRVSYNTLLSIYAKLGRF 1629
Query: 421 EDALNVCRKMGRSGVKKDVVTYNALLDGYGKQGKFNEVIRVFNEMKRDGVSPNLLTYSTL 480
EDALNVCR+MGRSGVKKDVVTYNALLDGYGKQGKFNEVIRVFNEMKRDGVSPNLLTYSTL
Sbjct: 1630 EDALNVCREMGRSGVKKDVVTYNALLDGYGKQGKFNEVIRVFNEMKRDGVSPNLLTYSTL 1689
Query: 481 IDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGI 540
IDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGI
Sbjct: 1690 IDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGI 1749
Query: 541 RPNVITYNSIIDAFGRSTTEESLVEAVGAASESPSFIVMEGVDESEIESWVSDHVFKFYR 600
RPNVITYNSIIDAFGRSTTEESLVEAVGAASESPSFIVMEGVDESEIESWVSDHVFKFYR
Sbjct: 1750 RPNVITYNSIIDAFGRSTTEESLVEAVGAASESPSFIVMEGVDESEIESWVSDHVFKFYR 1809
Query: 601 QLVAEKEGPAKKERLGEEEIRSILRVFKKMHELEIKPNVVTFSAILNACSHCKSIEDASM 660
QLVAEKEGPAKKERLGEEEIRSILRVFKKMHELEIKPNVVTFSAILNACS CKSIEDASM
Sbjct: 1810 QLVAEKEGPAKKERLGEEEIRSILRVFKKMHELEIKPNVVTFSAILNACSRCKSIEDASM 1869
Query: 661 LLEELRLFDNQVYGVAHGLLMGFSENVWVQAQCLFDEVKQMDPSTAASFYNALTDMLWHL 720
LLEELRLFDNQVYGVAHGLLMGFSENVWVQAQCLFDEVKQMDPSTAASFYNALTDMLWHL
Sbjct: 1870 LLEELRLFDNQVYGVAHGLLMGFSENVWVQAQCLFDEVKQMDPSTAASFYNALTDMLWHL 1929
Query: 721 GQKRGAQLVVLEGKRRNVWETLWSDSCLDLHLMSSGAAHAMVHAWLLGIHSLVFNGHQLP 780
GQKRGAQLVVLEGKRRNVWETLWSDSCLDLHLMSSGAAHAMVHAWLLGIHSLVFNGHQLP
Sbjct: 1930 GQKRGAQLVVLEGKRRNVWETLWSDSCLDLHLMSSGAAHAMVHAWLLGIHSLVFNGHQLP 1989
BLAST of Carg13389 vs. NCBI nr
Match:
XP_023004451.1 (pentatricopeptide repeat-containing protein At2g31400, chloroplastic-like [Cucurbita maxima])
HSP 1 Score: 1517.7 bits (3928), Expect = 0.0e+00
Identity = 771/779 (98.97%), Postives = 775/779 (99.49%), Query Frame = 0
Query: 1 MASTPPHCSITTAKPYQTRQYPQNNLKNHQNPRQNGSWTTTHKVSLVKPLSPTPTHSATK 60
MASTPPHCSITTAKPYQTRQYPQNNLKNHQNPRQNGSWTTTHKVSLVKP+SPTPTHSATK
Sbjct: 1 MASTPPHCSITTAKPYQTRQYPQNNLKNHQNPRQNGSWTTTHKVSLVKPVSPTPTHSATK 60
Query: 61 STSTSTSTPLSQSPNFPSLCSLSSKSDLVSNFSGRRSTRCVSKYHNRRPKSSMATRHTAI 120
STSTSTPLSQSPNFPSLCSLSSKSDLVSNFSGRRSTRCVSKYHNRRPKSSMATRHTAI
Sbjct: 61 --STSTSTPLSQSPNFPSLCSLSSKSDLVSNFSGRRSTRCVSKYHNRRPKSSMATRHTAI 120
Query: 121 AEEVLNQALQFGKDDTSLDNILLEFESHLCGSVDYTFLLRELGNRGECWKSIRCFEFALV 180
AEEVLNQALQFGKDDTSLDNILLEFESHLCGSVDYTFLLRELGNRGECWKSIRCFEFALV
Sbjct: 121 AEEVLNQALQFGKDDTSLDNILLEFESHLCGSVDYTFLLRELGNRGECWKSIRCFEFALV 180
Query: 181 REGRGNERGKLASAMISTLGRLGKVELAKGVFETALNQGYGNTVYAFSALISAYGKSGYF 240
REGR NERGKLASAMISTLGRLGKVELAKGVFETALNQGYGNTVYAFSALISAYGKSGYF
Sbjct: 181 REGRDNERGKLASAMISTLGRLGKVELAKGVFETALNQGYGNTVYAFSALISAYGKSGYF 240
Query: 241 DQAIKVFESMKASGLKPNLVTYNAVIDACGKGGVEFKKVVEVFEEMLRNGVQPDRITYNS 300
DQAIKVFESMKASGLKPNLVTYNAVIDACGKGGVEFKKVVEVFEEMLRNGVQPDRITYNS
Sbjct: 241 DQAIKVFESMKASGLKPNLVTYNAVIDACGKGGVEFKKVVEVFEEMLRNGVQPDRITYNS 300
Query: 301 LLAACSRGGSWEAARNLLNEMVDRGIDQDIITYNTLLDAVCKGGQMNLAFEIMLEMPAKK 360
LLAACSRGGSWEAARNLLNEMVDRGIDQDIITYNTLLDAVCKGGQM+LAFEIMLEMPAKK
Sbjct: 301 LLAACSRGGSWEAARNLLNEMVDRGIDQDIITYNTLLDAVCKGGQMDLAFEIMLEMPAKK 360
Query: 361 ILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLRIGLDRVSYNTLLSIYAKLGRFEDAL 420
ILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLRIGLDRVSYNTLLSIYAKLGRFEDAL
Sbjct: 361 ILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLRIGLDRVSYNTLLSIYAKLGRFEDAL 420
Query: 421 NVCRKMGRSGVKKDVVTYNALLDGYGKQGKFNEVIRVFNEMKRDGVSPNLLTYSTLIDVY 480
NVCR+MGRSGVKKDVVTYNALLDGYGKQGKFNEVIRVFNEMKRDGVSPNLLTYSTLIDVY
Sbjct: 421 NVCREMGRSGVKKDVVTYNALLDGYGKQGKFNEVIRVFNEMKRDGVSPNLLTYSTLIDVY 480
Query: 481 SKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPNV 540
SKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPNV
Sbjct: 481 SKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPNV 540
Query: 541 ITYNSIIDAFGRSTTEESLVEAVGAASESPSFIVMEGVDESEIESWVSDHVFKFYRQLVA 600
ITYNSIIDAFGRSTTEESLVEAVGAASESPSFIVMEGVDESEIESWVSDHVFKFYR+LVA
Sbjct: 541 ITYNSIIDAFGRSTTEESLVEAVGAASESPSFIVMEGVDESEIESWVSDHVFKFYRRLVA 600
Query: 601 EKEGPAKKERLGEEEIRSILRVFKKMHELEIKPNVVTFSAILNACSHCKSIEDASMLLEE 660
EKEGPAKKERLGEEEIRSILRVFKKMHELEIKPNVVTFSAILNACS CKSIEDASMLLEE
Sbjct: 601 EKEGPAKKERLGEEEIRSILRVFKKMHELEIKPNVVTFSAILNACSRCKSIEDASMLLEE 660
Query: 661 LRLFDNQVYGVAHGLLMGFSENVWVQAQCLFDEVKQMDPSTAASFYNALTDMLWHLGQKR 720
LRLFDNQVYGVAHGLLMGFSENVWVQAQCLFDEVKQMDPSTAASFYNALTDMLWHLGQKR
Sbjct: 661 LRLFDNQVYGVAHGLLMGFSENVWVQAQCLFDEVKQMDPSTAASFYNALTDMLWHLGQKR 720
Query: 721 GAQLVVLEGKRRNVWETLWSDSCLDLHLMSSGAAHAMVHAWLLGIHSLVFNGHQLPKLL 780
GAQLVVLEGKRRNVWETLWSDSCLDLHLMSSGAAHAMVHAWLLGIHSLVFNGHQLPKLL
Sbjct: 721 GAQLVVLEGKRRNVWETLWSDSCLDLHLMSSGAAHAMVHAWLLGIHSLVFNGHQLPKLL 777
BLAST of Carg13389 vs. NCBI nr
Match:
XP_023513984.1 (pentatricopeptide repeat-containing protein At2g31400, chloroplastic-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1513.4 bits (3917), Expect = 0.0e+00
Identity = 773/782 (98.85%), Postives = 776/782 (99.23%), Query Frame = 0
Query: 1 MASTPPHCSITTAKPYQTRQYPQNNLKNHQNPRQNGSWTTTHKVSLVKPLSPTPTHSATK 60
MASTPPHCSITTAKPYQTRQYPQNNLKNHQNPRQNGSWTTTHKVSLVKPLSPTPTHSATK
Sbjct: 1 MASTPPHCSITTAKPYQTRQYPQNNLKNHQNPRQNGSWTTTHKVSLVKPLSPTPTHSATK 60
Query: 61 --STSTSTSTPLSQSPNFPSLCSL-SSKSDLVSNFSGRRSTRCVSKYHNRRPKSSMATRH 120
STSTSTSTPLSQSPNFPSLCSL SSKSDLVSNFSGRRSTRCVSKYHNRRPKSSMATRH
Sbjct: 61 STSTSTSTSTPLSQSPNFPSLCSLSSSKSDLVSNFSGRRSTRCVSKYHNRRPKSSMATRH 120
Query: 121 TAIAEEVLNQALQFGKDDTSLDNILLEFESHLCGSVDYTFLLRELGNRGECWKSIRCFEF 180
TAIAEEVLNQALQFGKDDTSLD+ILLEFESHLCGSVDYTFLLRELGNRGECWKSIRCFEF
Sbjct: 121 TAIAEEVLNQALQFGKDDTSLDDILLEFESHLCGSVDYTFLLRELGNRGECWKSIRCFEF 180
Query: 181 ALVREGRGNERGKLASAMISTLGRLGKVELAKGVFETALNQGYGNTVYAFSALISAYGKS 240
ALVREGR NERGKLASAMISTLGRLGKVELAKGVFETALNQGYGNTVYAFSALISAYGKS
Sbjct: 181 ALVREGRDNERGKLASAMISTLGRLGKVELAKGVFETALNQGYGNTVYAFSALISAYGKS 240
Query: 241 GYFDQAIKVFESMKASGLKPNLVTYNAVIDACGKGGVEFKKVVEVFEEMLRNGVQPDRIT 300
GYFDQAIKVFESMKASGLKPNLVTYNAVIDACGKGGVEFKKVVEVFEEMLRNGVQPDRIT
Sbjct: 241 GYFDQAIKVFESMKASGLKPNLVTYNAVIDACGKGGVEFKKVVEVFEEMLRNGVQPDRIT 300
Query: 301 YNSLLAACSRGGSWEAARNLLNEMVDRGIDQDIITYNTLLDAVCKGGQMNLAFEIMLEMP 360
YNSLLAACSRGGSWEAARNLLNEMVDRGIDQDIITYNTLLDAVCKGGQM+LAFEIMLEMP
Sbjct: 301 YNSLLAACSRGGSWEAARNLLNEMVDRGIDQDIITYNTLLDAVCKGGQMDLAFEIMLEMP 360
Query: 361 AKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLRIGLDRVSYNTLLSIYAKLGRFE 420
AKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLRIGLDRVSYNTLLSIYAKLGRFE
Sbjct: 361 AKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLRIGLDRVSYNTLLSIYAKLGRFE 420
Query: 421 DALNVCRKMGRSGVKKDVVTYNALLDGYGKQGKFNEVIRVFNEMKRDGVSPNLLTYSTLI 480
DALNVCR+MGRSGVKKDVVTYNALLDGYGKQGKFNEVIRVFNEMKRDGVSPNLLTYSTLI
Sbjct: 421 DALNVCREMGRSGVKKDVVTYNALLDGYGKQGKFNEVIRVFNEMKRDGVSPNLLTYSTLI 480
Query: 481 DVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIR 540
DVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIR
Sbjct: 481 DVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIR 540
Query: 541 PNVITYNSIIDAFGRSTTEESLVEAVGAASESPSFIVMEGVDESEIESWVSDHVFKFYRQ 600
PNVITYNSIIDAFGRSTTEESLVEAVGAASESPSFIVMEGVDESEIESWVSDHVFKFYRQ
Sbjct: 541 PNVITYNSIIDAFGRSTTEESLVEAVGAASESPSFIVMEGVDESEIESWVSDHVFKFYRQ 600
Query: 601 LVAEKEGPAKKERLGEEEIRSILRVFKKMHELEIKPNVVTFSAILNACSHCKSIEDASML 660
LVAEKEGPAKKERLGEEEIRSILRVFKKMHELEIKPNVVTFSAILNACS CKSIEDASML
Sbjct: 601 LVAEKEGPAKKERLGEEEIRSILRVFKKMHELEIKPNVVTFSAILNACSRCKSIEDASML 660
Query: 661 LEELRLFDNQVYGVAHGLLMGFSENVWVQAQCLFDEVKQMDPSTAASFYNALTDMLWHLG 720
LEELRLFDNQVYGVAHGLLMGFSENVWVQAQCLFDEVKQMDPSTAASFYNALTDMLWHLG
Sbjct: 661 LEELRLFDNQVYGVAHGLLMGFSENVWVQAQCLFDEVKQMDPSTAASFYNALTDMLWHLG 720
Query: 721 QKRGAQLVVLEGKRRNVWETLWSDSCLDLHLMSSGAAHAMVHAWLLGIHSLVFNGHQLPK 780
QKRGAQLVVLEGKRRNVWETLWSDSCLDLHLMSSGAA AMVHAWLLGIHSLVFNGHQLPK
Sbjct: 721 QKRGAQLVVLEGKRRNVWETLWSDSCLDLHLMSSGAARAMVHAWLLGIHSLVFNGHQLPK 780
BLAST of Carg13389 vs. ExPASy Swiss-Prot
Match:
Q9SIC9 (Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g31400 PE=2 SV=1)
HSP 1 Score: 943.7 bits (2438), Expect = 1.3e-273
Identity = 495/784 (63.14%), Postives = 596/784 (76.02%), Query Frame = 0
Query: 7 HCSITTAKPYQTRQYPQNNLKNHQNPRQNGSWTTTHKVSLVKP--------LSPTPTHSA 66
H S TT + Q P+++ Q+ R T H+ + P S +P SA
Sbjct: 44 HLSQTTPN-FSPLQTPKSDFSGRQSTRFVSPATNNHRQTRQNPNYNHRPYGASSSPRGSA 103
Query: 67 TKSTSTSTSTP--LSQSPNFPSLCSLSSKSDLVSNFSGRRSTRCVSKYHNRRPKSSMATR 126
+S +T P LSQ PNF L + KSDL S+FSGRRSTR VSK H R K++MATR
Sbjct: 104 PPPSSVATVAPAQLSQPPNFSPL--QTPKSDLSSDFSGRRSTRFVSKMHFGRQKTTMATR 163
Query: 127 HTAIAEEVLNQALQFGKDDTSLDNILLEFESHLCGSVDYTFLLRELGNRGECWKSIRCFE 186
H++ AE+ L A+ F DD +++L FES LCGS D T+++RELGNR EC K++ +E
Sbjct: 164 HSSAAEDALQNAIDFSGDDEMFHSLMLSFESKLCGSDDCTYIIRELGNRNECDKAVGFYE 223
Query: 187 FALVREGRGNERGKLASAMISTLGRLGKVELAKGVFETALNQGYGNTVYAFSALISAYGK 246
FA+ RE R NE+GKLASAMISTLGR GKV +AK +FETA GYGNTVYAFSALISAYG+
Sbjct: 224 FAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGR 283
Query: 247 SGYFDQAIKVFESMKASGLKPNLVTYNAVIDACGKGGVEFKKVVEVFEEMLRNGVQPDRI 306
SG ++AI VF SMK GL+PNLVTYNAVIDACGKGG+EFK+V + F+EM RNGVQPDRI
Sbjct: 284 SGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRI 343
Query: 307 TYNSLLAACSRGGSWEAARNLLNEMVDRGIDQDIITYNTLLDAVCKGGQMNLAFEIMLEM 366
T+NSLLA CSRGG WEAARNL +EM +R I+QD+ +YNTLLDA+CKGGQM+LAFEI+ +M
Sbjct: 344 TFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQM 403
Query: 367 PAKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLRIGLDRVSYNTLLSIYAKLGRF 426
P K+I+PNVV+YST+ DG+AKAGR ++ALNL+ EM++L I LDRVSYNTLLSIY K+GR
Sbjct: 404 PVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRS 463
Query: 427 EDALNVCRKMGRSGVKKDVVTYNALLDGYGKQGKFNEVIRVFNEMKRDGVSPNLLTYSTL 486
E+AL++ R+M G+KKDVVTYNALL GYGKQGK++EV +VF EMKR+ V PNLLTYSTL
Sbjct: 464 EEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTL 523
Query: 487 IDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGI 546
ID YSKG LY+EAME+FREFK AGL+ADVVLYS LI+ALCKNGLV SAVSL+DEM KEGI
Sbjct: 524 IDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGI 583
Query: 547 RPNVITYNSIIDAFGRSTTEESLVEAVGAASESPSFIVMEGVDESEIESWVSDHVFKFYR 606
PNV+TYNSIIDAFGRS T + + S S + + E+E + V + +
Sbjct: 584 SPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETE-----GNRVIQLFG 643
Query: 607 QLVAEKEGPAKKE-RLGEEEIRSILRVFKKMHELEIKPNVVTFSAILNACSHCKSIEDAS 666
QL E K+ G +E+ IL VF+KMH+LEIKPNVVTFSAILNACS C S EDAS
Sbjct: 644 QLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDAS 703
Query: 667 MLLEELRLFDNQVYGVAHGLLMGFSENVWVQAQCLFDEVKQMDPSTAASFYNALTDMLWH 726
MLLEELRLFDN+VYGV HGLLMG ENVW+QAQ LFD+V +MD STA++FYNALTDMLWH
Sbjct: 704 MLLEELRLFDNKVYGVVHGLLMGQRENVWLQAQSLFDKVNEMDGSTASAFYNALTDMLWH 763
Query: 727 LGQKRGAQLVVLEGKRRNVWETLWSDSCLDLHLMSSGAAHAMVHAWLLGIHSLVFNGHQL 780
GQKRGA+LV LEG+ R VWE +WSDSCLDLHLMSSGAA AMVHAWLL I S+V+ GH+L
Sbjct: 764 FGQKRGAELVALEGRSRQVWENVWSDSCLDLHLMSSGAARAMVHAWLLNIRSIVYEGHEL 819
BLAST of Carg13389 vs. ExPASy Swiss-Prot
Match:
Q9S7Q2 (Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PTAC2 PE=2 SV=1)
HSP 1 Score: 285.0 bits (728), Expect = 2.5e-75
Identity = 175/658 (26.60%), Postives = 343/658 (52.13%), Query Frame = 0
Query: 154 DYTFLLRELGNRGECWKSIRCFEFALVREGRGNERGKLASAMISTLGRLGKVELAKGVFE 213
D+ + +E RG+ +S+R F++ + R+ + + MIS LGR G ++ VF+
Sbjct: 107 DFALVFKEFAGRGDWQRSLRLFKY-MQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFD 166
Query: 214 TALNQGYGNTVYAFSALISAYGKSGYFDQAIKVFESMKASGLKPNLVTYNAVIDACGKGG 273
+QG +V++++ALI+AYG++G ++ ++++ + MK + P+++TYN VI+AC +GG
Sbjct: 167 EMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGG 226
Query: 274 VEFKKVVEVFEEMLRNGVQPDRITYNSLLAACSRGGSWEAARNLLNEMVDRGIDQDIITY 333
++++ ++ +F EM G+QPD +TYN+LL+AC+ G + A + M D GI D+ TY
Sbjct: 227 LDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTY 286
Query: 334 NTLLDAVCKGGQMNLAFEIMLEMPAKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKF 393
+ L++ K ++ +++ EM + LP++ +Y+ + + YAK+G +++A+ ++++M+
Sbjct: 287 SHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQA 346
Query: 394 LRIGLDRVSYNTLLSIYAKLGRFEDALNVCRKMGRSGVKKDVVTYNALLDGYGKQGKFNE 453
+ +Y+ LL+++ + GR++D + +M S D TYN L++ +G+ G F E
Sbjct: 347 AGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKE 406
Query: 454 VIRVFNEMKRDGVSPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELIN 513
V+ +F++M + + P++ TY +I KG L+E+A ++ + + Y+ +I
Sbjct: 407 VVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIE 466
Query: 514 ALCKNGLVDSAVSLLDEMIKEGIRPNVITYNSIIDAFGRSTTEESLVEAVGAASESPSFI 573
A + L + A+ + M + G P++ T++S++ +F R G ES
Sbjct: 467 AFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARG----------GLVKES---- 526
Query: 574 VMEGVDESEIESWVSDHVFKFYRQLVAEKEGPAKKERL-------------GEEEIRSIL 633
E + ++S + + F Q+ A K+G +E + E + ++L
Sbjct: 527 --EAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVL 586
Query: 634 RV-------------FKKMHELEIKPNVVTFSAILNACSHCKSIEDASMLLEE-LRLFDN 693
V F++M +I P+++ + +L + +D + LLEE L +
Sbjct: 587 SVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRVS 646
Query: 694 QVYGVAHGLLMG--FSENVWVQAQCLFDEVKQMDPSTAASFYNALTDMLWHLGQKRGAQL 753
++ V ++ G ++ W + + D++ FYNAL D LW LGQK A
Sbjct: 647 NIHQVIGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDALWWLGQKERAAR 706
Query: 754 VVLEGKRRNVWETLWSDSCL----DLHLMSSGAAHAMVHAWLLGIHSLVFNGHQLPKL 779
V+ E +R ++ L+ + L D+H MS G + + WL I+ ++ G LP+L
Sbjct: 707 VLNEATKRGLFPELFRKNKLVWSVDVHRMSEGGMYTALSVWLNDINDMLLKG-DLPQL 746
BLAST of Carg13389 vs. ExPASy Swiss-Prot
Match:
Q9LYZ9 (Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX=3702 GN=At5g02860 PE=2 SV=1)
HSP 1 Score: 253.1 bits (645), Expect = 1.1e-65
Identity = 183/691 (26.48%), Postives = 333/691 (48.19%), Query Frame = 0
Query: 48 KPLSPTPTH--SATKSTSTSTSTP-------------LSQSPNFPSLCSLSSKSDLVSNF 107
KP S H S T +TS S+P L Q+PN S+ + S
Sbjct: 18 KPYSHDQNHHISRTPFLTTSLSSPPPPPVEPLLHDVFLHQNPN--------SRQPISSQT 77
Query: 108 SGRRSTRCVSKYHNRRPKSSMATRHTAIA---EEVLNQALQFGKDDTSLDNILLEF---- 167
S R+ + K +R P + ++ ++VL ++ D LD++L E
Sbjct: 78 SRNRNRTRIGK--SRDPNLGKPWSYHGLSPQGQQVLRSLIEPNFDSGQLDSVLSELFEPF 137
Query: 168 -ESHLCGSVDYTFLLRELGNRGECWKSIRCFE-FALVREGRGNERGKLASAMISTLGRLG 227
+ S + L+ LG + ++R F+ F ++ + + + +IS LG+ G
Sbjct: 138 KDKPESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEG 197
Query: 228 KVELAKGVFETALNQGYGNTVYAFSALISAYGKSGYFDQAIKVFESMKASGLKPNLVTYN 287
+V A +F G+ VY++++LISA+ SG + +A+ VF+ M+ G KP L+TYN
Sbjct: 198 RVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYN 257
Query: 288 AVIDACGKGGVEFKKVVEVFEEMLRNGVQPDRITYNSLLAACSRGGSWEAARNLLNEMVD 347
+++ GK G + K+ + E+M +G+ PD TYN+L+ C RG + A + EM
Sbjct: 258 VILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKA 317
Query: 348 RGIDQDIITYNTLLDAVCKGGQMNLAFEIMLEMPAKKILPNVVTYSTMADGYAKAGRLED 407
G D +TYN LLD K + A +++ EM P++VTY+++ YA+ G L++
Sbjct: 318 AGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDE 377
Query: 408 ALNLYNEMKFLRIGLDRVSYNTLLSIYAKLGRFEDALNVCRKMGRSGVKKDVVTYNALLD 467
A+ L N+M D +Y TLLS + + G+ E A+++ +M +G K ++ T+NA +
Sbjct: 378 AMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIK 437
Query: 468 GYGKQGKFNEVIRVFNEMKRDGVSPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKA 527
YG +GKF E++++F+E+ G+SP+++T++TL+ V+ + + E VF+E K+AG
Sbjct: 438 MYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVP 497
Query: 528 DVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPNVITYNSIIDAFGRSTTEESLVEAV 587
+ ++ LI+A + G + A+++ M+ G+ P++ TYN+++ A R
Sbjct: 498 ERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALAR----------- 557
Query: 588 GAASESPSFIVMEGVDESEIESWVSDHVFKFYRQLVAEKEGPAKKERLGEEEIRSILRVF 647
G E ++ E D + + L A G +EI + +
Sbjct: 558 GGMWEQSEKVLAEMED-----GRCKPNELTYCSLLHAYANG---------KEIGLMHSLA 617
Query: 648 KKMHELEIKPNVVTFSAILNACSHCKSIEDASMLLEEL--RLFDNQVYGVAHGLLMGFSE 707
++++ I+P V ++ CS C + +A EL R F + + + +
Sbjct: 618 EEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRR 673
Query: 708 NVWVQAQCLFDEVKQMDPSTAASFYNALTDM 713
+ +A + D +K+ + + + YN+L M
Sbjct: 678 QMVAKANGVLDYMKERGFTPSMATYNSLMYM 673
BLAST of Carg13389 vs. ExPASy Swiss-Prot
Match:
Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)
HSP 1 Score: 219.5 bits (558), Expect = 1.3e-55
Identity = 128/453 (28.26%), Postives = 230/453 (50.77%), Query Frame = 0
Query: 222 NTVYAFSALISAYGKSGYFDQAIKVFESMKASGLKPNLVTYNAVIDACGKGGVEFKKVVE 281
+T F ++ +Y + D+A+ + +A G P +++YNAV+DA +
Sbjct: 132 STSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAEN 191
Query: 282 VFEEMLRNGVQPDRITYNSLLAACSRGGSWEAARNLLNEMVDRGIDQDIITYNTLLDAVC 341
VF+EML + V P+ TYN L+ G+ + A L ++M +G +++TYNTL+D C
Sbjct: 192 VFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYC 251
Query: 342 KGGQMNLAFEIMLEMPAKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLRIGLDRV 401
K +++ F+++ M K + PN+++Y+ + +G + GR+++ + EM LD V
Sbjct: 252 KLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEV 311
Query: 402 SYNTLLSIYAKLGRFEDALNVCRKMGRSGVKKDVVTYNALLDGYGKQGKFNEVIRVFNEM 461
+YNTL+ Y K G F AL + +M R G+ V+TY +L+ K G N + ++M
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM 371
Query: 462 KRDGVSPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLV 521
+ G+ PN TY+TL+D +S+ EA V RE G VV Y+ LIN C G +
Sbjct: 372 RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKM 431
Query: 522 DSAVSLLDEMIKEGIRPNVITYNSIIDAFGRSTTEESLVEAVGAASE---SPSFIVMEGV 581
+ A+++L++M ++G+ P+V++Y++++ F RS + + E P I +
Sbjct: 432 EDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSL 491
Query: 582 DESEIESWVSDHVFKFYRQLVAEKEGPAK-------KERLGEEEIRSILRVFKKMHELEI 641
+ E + Y +++ P + E ++ L++ +M E +
Sbjct: 492 IQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGV 551
Query: 642 KPNVVTFSAILNACSHCKSIEDASMLLEELRLF 665
P+VVT+S ++N + +A LL L+LF
Sbjct: 552 LPDVVTYSVLINGLNKQSRTREAKRLL--LKLF 582
BLAST of Carg13389 vs. ExPASy Swiss-Prot
Match:
Q9ASZ8 (Pentatricopeptide repeat-containing protein At1g12620 OS=Arabidopsis thaliana OX=3702 GN=At1g12620 PE=2 SV=1)
HSP 1 Score: 217.2 bits (552), Expect = 6.4e-55
Identity = 133/523 (25.43%), Postives = 252/523 (48.18%), Query Frame = 0
Query: 193 SAMISTLGRLGKVELAKGVFETALNQGYGNTVYAFSALISAYGKSGYFDQAIKVFESMKA 252
S MI+ R K+ LA + GY FS LI+ G +A+++ + M
Sbjct: 111 SIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVE 170
Query: 253 SGLKPNLVTYNAVIDACGKGGVEFKKVVEVFEEMLRNGVQPDRITYNSLLAACSRGGSWE 312
G KP L+T NA+++ G + V + + M+ G QP+ +TY +L + G
Sbjct: 171 MGHKPTLITLNALVNGLCLNG-KVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTA 230
Query: 313 AARNLLNEMVDRGIDQDIITYNTLLDAVCKGGQMNLAFEIMLEMPAKKILPNVVTYSTMA 372
A LL +M +R I D + Y+ ++D +CK G ++ AF + EM K +++ Y+T+
Sbjct: 231 LAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLI 290
Query: 373 DGYAKAGRLEDALNLYNEMKFLRIGLDRVSYNTLLSIYAKLGRFEDALNVCRKMGRSGVK 432
G+ AGR +D L +M +I D V+++ L+ + K G+ +A + ++M + G+
Sbjct: 291 RGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 350
Query: 433 KDVVTYNALLDGYGKQGKFNEVIRVFNEMKRDGVSPNLLTYSTLIDVYSKGSLYEEAMEV 492
D VTY +L+DG+ K+ + ++ + + M G PN+ T++ LI+ Y K +L ++ +E+
Sbjct: 351 PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLEL 410
Query: 493 FREFKQAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPNVITYNSIIDAFGR 552
FR+ G+ AD V Y+ LI C+ G ++ A L EM+ +RP++++Y ++D
Sbjct: 411 FRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCD 470
Query: 553 STTEESLVEAVGAASESPSFIVMEGVDESEIESWVSDHVFKFYRQLVAEKEGPAKKERLG 612
+ E +E + E +++S++E + + + A K
Sbjct: 471 NGEPEKALE------------IFEKIEKSKMELDIGIYNIIIHGMCNASK---------- 530
Query: 613 EEEIRSILRVFKKMHELEIKPNVVTFSAILNACSHCKSIEDASMLLEELRLFDNQVYGVA 672
+ +F + +KP+V T++ ++ S+ +A +L ++ + G
Sbjct: 531 ---VDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCT 590
Query: 673 HGLLM--GFSENVWVQAQCLFDEVKQMDPSTAASFYNALTDML 714
+ +L+ E ++ L +E+K+ S AS + DML
Sbjct: 591 YNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML 607
BLAST of Carg13389 vs. ExPASy TrEMBL
Match:
A0A6J1HA78 (pentatricopeptide repeat-containing protein At2g31400, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111461004 PE=3 SV=1)
HSP 1 Score: 1526.9 bits (3952), Expect = 0.0e+00
Identity = 774/779 (99.36%), Postives = 777/779 (99.74%), Query Frame = 0
Query: 1 MASTPPHCSITTAKPYQTRQYPQNNLKNHQNPRQNGSWTTTHKVSLVKPLSPTPTHSATK 60
MASTPPHCSITTAKPYQTRQYPQNNLKNHQNPRQNGSWTTTHKVSLVKPLSPTPTHSATK
Sbjct: 1 MASTPPHCSITTAKPYQTRQYPQNNLKNHQNPRQNGSWTTTHKVSLVKPLSPTPTHSATK 60
Query: 61 STSTSTSTPLSQSPNFPSLCSLSSKSDLVSNFSGRRSTRCVSKYHNRRPKSSMATRHTAI 120
STSTSTSTPLSQSPNFPSLCSLSSKSDLVSNFSGRRSTRCVSKYHNRRPKSSMATRHTAI
Sbjct: 61 STSTSTSTPLSQSPNFPSLCSLSSKSDLVSNFSGRRSTRCVSKYHNRRPKSSMATRHTAI 120
Query: 121 AEEVLNQALQFGKDDTSLDNILLEFESHLCGSVDYTFLLRELGNRGECWKSIRCFEFALV 180
AEEVLNQALQFGKDDTSLDNILLEFESHLCGSVDYTFLLRELGNRGECWKSIRCFEFALV
Sbjct: 121 AEEVLNQALQFGKDDTSLDNILLEFESHLCGSVDYTFLLRELGNRGECWKSIRCFEFALV 180
Query: 181 REGRGNERGKLASAMISTLGRLGKVELAKGVFETALNQGYGNTVYAFSALISAYGKSGYF 240
REGRGNERGKLASAMISTLGRLGKVELAKGVFETALNQGYGNTVYAFSALISAYGKSGYF
Sbjct: 181 REGRGNERGKLASAMISTLGRLGKVELAKGVFETALNQGYGNTVYAFSALISAYGKSGYF 240
Query: 241 DQAIKVFESMKASGLKPNLVTYNAVIDACGKGGVEFKKVVEVFEEMLRNGVQPDRITYNS 300
DQAIKVFESMKASGLKPNLVTYNAVIDACGKGGVEFKKVVEVFEEMLRNGVQPDRITYNS
Sbjct: 241 DQAIKVFESMKASGLKPNLVTYNAVIDACGKGGVEFKKVVEVFEEMLRNGVQPDRITYNS 300
Query: 301 LLAACSRGGSWEAARNLLNEMVDRGIDQDIITYNTLLDAVCKGGQMNLAFEIMLEMPAKK 360
LLAACSRGGSWEAA+NLLNEMVDRGIDQDIITYNTLLDAVCKGGQM+LAFEIMLEMPAKK
Sbjct: 301 LLAACSRGGSWEAAQNLLNEMVDRGIDQDIITYNTLLDAVCKGGQMDLAFEIMLEMPAKK 360
Query: 361 ILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLRIGLDRVSYNTLLSIYAKLGRFEDAL 420
ILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLRIGLDRVSYNTLLSIYAKLGRFEDAL
Sbjct: 361 ILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLRIGLDRVSYNTLLSIYAKLGRFEDAL 420
Query: 421 NVCRKMGRSGVKKDVVTYNALLDGYGKQGKFNEVIRVFNEMKRDGVSPNLLTYSTLIDVY 480
NVCR+MGRSGVKKDVVTYNALLDGYGKQGKFNEVIRVFNEMKRDGV PNLLTYSTLIDVY
Sbjct: 421 NVCREMGRSGVKKDVVTYNALLDGYGKQGKFNEVIRVFNEMKRDGVLPNLLTYSTLIDVY 480
Query: 481 SKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPNV 540
SKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPNV
Sbjct: 481 SKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPNV 540
Query: 541 ITYNSIIDAFGRSTTEESLVEAVGAASESPSFIVMEGVDESEIESWVSDHVFKFYRQLVA 600
ITYNSIIDAFGRSTTEESLVEAVGAASESPSFIVMEGVDESEIESWVSDHVFKFYRQLVA
Sbjct: 541 ITYNSIIDAFGRSTTEESLVEAVGAASESPSFIVMEGVDESEIESWVSDHVFKFYRQLVA 600
Query: 601 EKEGPAKKERLGEEEIRSILRVFKKMHELEIKPNVVTFSAILNACSHCKSIEDASMLLEE 660
EKEGPAKKERLGEEEIRSILRVFKKMHELEIKPNVVTFSAILNACS CKSIEDASMLLEE
Sbjct: 601 EKEGPAKKERLGEEEIRSILRVFKKMHELEIKPNVVTFSAILNACSRCKSIEDASMLLEE 660
Query: 661 LRLFDNQVYGVAHGLLMGFSENVWVQAQCLFDEVKQMDPSTAASFYNALTDMLWHLGQKR 720
LRLFDNQVYGVAHGLLMGFSENVWVQAQCLFDEVKQMDPSTAASFYNALTDMLWHLGQKR
Sbjct: 661 LRLFDNQVYGVAHGLLMGFSENVWVQAQCLFDEVKQMDPSTAASFYNALTDMLWHLGQKR 720
Query: 721 GAQLVVLEGKRRNVWETLWSDSCLDLHLMSSGAAHAMVHAWLLGIHSLVFNGHQLPKLL 780
GAQLVVLEGKRRNVWETLWSDSCLDLHLMSSGAAHAMVHAWLLGIHSLVFNGHQLPKLL
Sbjct: 721 GAQLVVLEGKRRNVWETLWSDSCLDLHLMSSGAAHAMVHAWLLGIHSLVFNGHQLPKLL 779
BLAST of Carg13389 vs. ExPASy TrEMBL
Match:
A0A6J1KS61 (pentatricopeptide repeat-containing protein At2g31400, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111497756 PE=3 SV=1)
HSP 1 Score: 1517.7 bits (3928), Expect = 0.0e+00
Identity = 771/779 (98.97%), Postives = 775/779 (99.49%), Query Frame = 0
Query: 1 MASTPPHCSITTAKPYQTRQYPQNNLKNHQNPRQNGSWTTTHKVSLVKPLSPTPTHSATK 60
MASTPPHCSITTAKPYQTRQYPQNNLKNHQNPRQNGSWTTTHKVSLVKP+SPTPTHSATK
Sbjct: 1 MASTPPHCSITTAKPYQTRQYPQNNLKNHQNPRQNGSWTTTHKVSLVKPVSPTPTHSATK 60
Query: 61 STSTSTSTPLSQSPNFPSLCSLSSKSDLVSNFSGRRSTRCVSKYHNRRPKSSMATRHTAI 120
STSTSTPLSQSPNFPSLCSLSSKSDLVSNFSGRRSTRCVSKYHNRRPKSSMATRHTAI
Sbjct: 61 --STSTSTPLSQSPNFPSLCSLSSKSDLVSNFSGRRSTRCVSKYHNRRPKSSMATRHTAI 120
Query: 121 AEEVLNQALQFGKDDTSLDNILLEFESHLCGSVDYTFLLRELGNRGECWKSIRCFEFALV 180
AEEVLNQALQFGKDDTSLDNILLEFESHLCGSVDYTFLLRELGNRGECWKSIRCFEFALV
Sbjct: 121 AEEVLNQALQFGKDDTSLDNILLEFESHLCGSVDYTFLLRELGNRGECWKSIRCFEFALV 180
Query: 181 REGRGNERGKLASAMISTLGRLGKVELAKGVFETALNQGYGNTVYAFSALISAYGKSGYF 240
REGR NERGKLASAMISTLGRLGKVELAKGVFETALNQGYGNTVYAFSALISAYGKSGYF
Sbjct: 181 REGRDNERGKLASAMISTLGRLGKVELAKGVFETALNQGYGNTVYAFSALISAYGKSGYF 240
Query: 241 DQAIKVFESMKASGLKPNLVTYNAVIDACGKGGVEFKKVVEVFEEMLRNGVQPDRITYNS 300
DQAIKVFESMKASGLKPNLVTYNAVIDACGKGGVEFKKVVEVFEEMLRNGVQPDRITYNS
Sbjct: 241 DQAIKVFESMKASGLKPNLVTYNAVIDACGKGGVEFKKVVEVFEEMLRNGVQPDRITYNS 300
Query: 301 LLAACSRGGSWEAARNLLNEMVDRGIDQDIITYNTLLDAVCKGGQMNLAFEIMLEMPAKK 360
LLAACSRGGSWEAARNLLNEMVDRGIDQDIITYNTLLDAVCKGGQM+LAFEIMLEMPAKK
Sbjct: 301 LLAACSRGGSWEAARNLLNEMVDRGIDQDIITYNTLLDAVCKGGQMDLAFEIMLEMPAKK 360
Query: 361 ILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLRIGLDRVSYNTLLSIYAKLGRFEDAL 420
ILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLRIGLDRVSYNTLLSIYAKLGRFEDAL
Sbjct: 361 ILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLRIGLDRVSYNTLLSIYAKLGRFEDAL 420
Query: 421 NVCRKMGRSGVKKDVVTYNALLDGYGKQGKFNEVIRVFNEMKRDGVSPNLLTYSTLIDVY 480
NVCR+MGRSGVKKDVVTYNALLDGYGKQGKFNEVIRVFNEMKRDGVSPNLLTYSTLIDVY
Sbjct: 421 NVCREMGRSGVKKDVVTYNALLDGYGKQGKFNEVIRVFNEMKRDGVSPNLLTYSTLIDVY 480
Query: 481 SKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPNV 540
SKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPNV
Sbjct: 481 SKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPNV 540
Query: 541 ITYNSIIDAFGRSTTEESLVEAVGAASESPSFIVMEGVDESEIESWVSDHVFKFYRQLVA 600
ITYNSIIDAFGRSTTEESLVEAVGAASESPSFIVMEGVDESEIESWVSDHVFKFYR+LVA
Sbjct: 541 ITYNSIIDAFGRSTTEESLVEAVGAASESPSFIVMEGVDESEIESWVSDHVFKFYRRLVA 600
Query: 601 EKEGPAKKERLGEEEIRSILRVFKKMHELEIKPNVVTFSAILNACSHCKSIEDASMLLEE 660
EKEGPAKKERLGEEEIRSILRVFKKMHELEIKPNVVTFSAILNACS CKSIEDASMLLEE
Sbjct: 601 EKEGPAKKERLGEEEIRSILRVFKKMHELEIKPNVVTFSAILNACSRCKSIEDASMLLEE 660
Query: 661 LRLFDNQVYGVAHGLLMGFSENVWVQAQCLFDEVKQMDPSTAASFYNALTDMLWHLGQKR 720
LRLFDNQVYGVAHGLLMGFSENVWVQAQCLFDEVKQMDPSTAASFYNALTDMLWHLGQKR
Sbjct: 661 LRLFDNQVYGVAHGLLMGFSENVWVQAQCLFDEVKQMDPSTAASFYNALTDMLWHLGQKR 720
Query: 721 GAQLVVLEGKRRNVWETLWSDSCLDLHLMSSGAAHAMVHAWLLGIHSLVFNGHQLPKLL 780
GAQLVVLEGKRRNVWETLWSDSCLDLHLMSSGAAHAMVHAWLLGIHSLVFNGHQLPKLL
Sbjct: 721 GAQLVVLEGKRRNVWETLWSDSCLDLHLMSSGAAHAMVHAWLLGIHSLVFNGHQLPKLL 777
BLAST of Carg13389 vs. ExPASy TrEMBL
Match:
A0A6J1D2T9 (pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111016779 PE=3 SV=1)
HSP 1 Score: 1359.4 bits (3517), Expect = 0.0e+00
Identity = 694/785 (88.41%), Postives = 736/785 (93.76%), Query Frame = 0
Query: 1 MASTPPHCSITTAKPYQTRQYPQNNLKNH-QNPRQNGSWTTTHKVSLVKPLSPTPTHSAT 60
MASTPPHCSITTAK YQT QYPQNNLKNH QNPRQNGSW TT KVSLVKPL +P +AT
Sbjct: 1 MASTPPHCSITTAKAYQTHQYPQNNLKNHRQNPRQNGSW-TTQKVSLVKPLPASPAQNAT 60
Query: 61 KSTSTSTSTPLSQSPNFPSLCSL-SSKSDLVSNFSGRRSTRCVSKYHNRRPKSSMATRHT 120
KS+++ST TP+SQ+PNFPSLCSL +SKS+L SNFSGRRSTR VSK+H RPKSSMATRHT
Sbjct: 61 KSSTSSTPTPISQNPNFPSLCSLPASKSELASNFSGRRSTRFVSKFHFGRPKSSMATRHT 120
Query: 121 AIAEEVLNQALQFGKDDTSLDNILLEFESHLCGSVDYTFLLRELGNRGECWKSIRCFEFA 180
IAEEVL+QALQFGKDD SLDN+LL FES LCGS DYTFLLRELGNRGECWK+IRCFEFA
Sbjct: 121 VIAEEVLHQALQFGKDDGSLDNVLLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFEFA 180
Query: 181 LVREGRGNERGKLASAMISTLGRLGKVELAKGVFETALNQGYGNTVYAFSALISAYGKSG 240
L REGR NERGKLASAMISTLGRLGKVELAKGVFETAL++GYGNTV+AFSALISAYGKSG
Sbjct: 181 LGREGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSG 240
Query: 241 YFDQAIKVFESMKASGLKPNLVTYNAVIDACGKGGVEFKKVVEVFEEMLRNGVQPDRITY 300
YFD+AIKVFESMK SGLKPNLVTYNAVIDACGKGGVEFK+VVE+F+EMLRNGVQPDRITY
Sbjct: 241 YFDRAIKVFESMKDSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFDEMLRNGVQPDRITY 300
Query: 301 NSLLAACSRGGSWEAARNLLNEMVDRGIDQDIITYNTLLDAVCKGGQMNLAFEIMLEMPA 360
NSLLA CSRGG WEAARNL +EMVDRGIDQDI TYNTLLDAVCKGGQM+LAFEIMLEMPA
Sbjct: 301 NSLLAVCSRGGLWEAARNLFHEMVDRGIDQDIFTYNTLLDAVCKGGQMDLAFEIMLEMPA 360
Query: 361 KKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLRIGLDRVSYNTLLSIYAKLGRFED 420
KKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFL IGLDRVSYNTLLSIYAKLGRFED
Sbjct: 361 KKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFED 420
Query: 421 ALNVCRKMGRSGVKKDVVTYNALLDGYGKQGKFNEVIRVFNEMKRDGVSPNLLTYSTLID 480
ALNVCR+MG SGVKKD VTYNALLDGYGKQGKFNEV RVF EMKRD V+PNLLTYSTLID
Sbjct: 421 ALNVCREMGSSGVKKDAVTYNALLDGYGKQGKFNEVTRVFKEMKRDRVTPNLLTYSTLID 480
Query: 481 VYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRP 540
VYSKGSL+EEAMEVF EFKQAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRP
Sbjct: 481 VYSKGSLFEEAMEVFHEFKQAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRP 540
Query: 541 NVITYNSIIDAFGRSTTEESLVEAVGAAS----ESPSFIVMEGVDESEIESWVSDHVFKF 600
NV+TYNSIIDAFGRSTT ESLV+AVGAAS E+PSF+++EGVDESE+E+W DHV KF
Sbjct: 541 NVVTYNSIIDAFGRSTTVESLVDAVGAASERQRETPSFMLIEGVDESEMENWDDDHVVKF 600
Query: 601 YRQLVAEKEGPAKKERLGEEEIRSILRVFKKMHELEIKPNVVTFSAILNACSHCKSIEDA 660
Y+QLV+EKEGPAKKERLG++EIRSIL VFKKMHELEIKPNVVTFSAILNACS CKSIEDA
Sbjct: 601 YQQLVSEKEGPAKKERLGKQEIRSILSVFKKMHELEIKPNVVTFSAILNACSRCKSIEDA 660
Query: 661 SMLLEELRLFDNQVYGVAHGLLMGFSENVWVQAQCLFDEVKQMDPSTAASFYNALTDMLW 720
SMLLEELRLFDNQVYGVAHGLLMG+SENVW+QAQ LFDEVKQMD STA++FYNALTDMLW
Sbjct: 661 SMLLEELRLFDNQVYGVAHGLLMGYSENVWIQAQFLFDEVKQMDSSTASAFYNALTDMLW 720
Query: 721 HLGQKRGAQLVVLEGKRRNVWETLWSDSCLDLHLMSSGAAHAMVHAWLLGIHSLVFNGHQ 780
H GQKRGAQLVVLEGKRR VWETLWSDSCLDLHLMSSGAA AMVHAWLLGIHS+VFNGHQ
Sbjct: 721 HFGQKRGAQLVVLEGKRRKVWETLWSDSCLDLHLMSSGAARAMVHAWLLGIHSVVFNGHQ 780
BLAST of Carg13389 vs. ExPASy TrEMBL
Match:
A0A5A7TZ92 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G001810 PE=4 SV=1)
HSP 1 Score: 1354.7 bits (3505), Expect = 0.0e+00
Identity = 693/785 (88.28%), Postives = 729/785 (92.87%), Query Frame = 0
Query: 1 MASTPPHCSITTAKPYQTRQYPQNNLKNH-QNPRQNGSWTTTHKVSLVKPLSPTPTHSAT 60
MASTPPHCSITTAKPYQT QYPQNNLKNH QNPRQNG WTTTHK SLVKP TP HSA
Sbjct: 1 MASTPPHCSITTAKPYQTHQYPQNNLKNHRQNPRQNGPWTTTHKFSLVKP--STPGHSAK 60
Query: 61 KSTSTSTSTPLSQSPNFPSLCSL-SSKSDLVSNFSGRRSTRCVSKYHNRRPKSSMATRHT 120
K STSTPLSQSPNF SLCSL +SKS+L SNFSG RSTR VSK+H RPKSSMATRHT
Sbjct: 61 K----STSTPLSQSPNFHSLCSLPTSKSELASNFSGHRSTRFVSKFHFGRPKSSMATRHT 120
Query: 121 AIAEEVLNQALQFGKDDTSLDNILLEFESHLCGSVDYTFLLRELGNRGECWKSIRCFEFA 180
AIAEEVL+Q LQFGKDD SLDNILL FES LCGS DYTFLLRELGNRGECWK+IRCF+FA
Sbjct: 121 AIAEEVLHQLLQFGKDDASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFA 180
Query: 181 LVREGRGNERGKLASAMISTLGRLGKVELAKGVFETALNQGYGNTVYAFSALISAYGKSG 240
LVREGR NE+GKLASAMISTLGRLGKVELAKGVFETAL++GYGNTV+AFSALISAYGKSG
Sbjct: 181 LVREGRKNEKGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSG 240
Query: 241 YFDQAIKVFESMKASGLKPNLVTYNAVIDACGKGGVEFKKVVEVFEEMLRNGVQPDRITY 300
YFD+AIKVFESMK SGLKPNLVTYNAVIDACGKGGVEFK+VVE+FEEMLRNGVQPDRITY
Sbjct: 241 YFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITY 300
Query: 301 NSLLAACSRGGSWEAARNLLNEMVDRGIDQDIITYNTLLDAVCKGGQMNLAFEIMLEMPA 360
NSLLA CSRGG WEAA+NL NEMVDRGIDQD+ TYNTLLDAVCKGGQM+LA+EIMLEMP
Sbjct: 301 NSLLAVCSRGGLWEAAQNLFNEMVDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPG 360
Query: 361 KKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLRIGLDRVSYNTLLSIYAKLGRFED 420
KKILPNVVTYSTMADGYAKAGRLEDALNLYN+MKFL IGLDRVSYNTLLSIYAKLGRFED
Sbjct: 361 KKILPNVVTYSTMADGYAKAGRLEDALNLYNDMKFLGIGLDRVSYNTLLSIYAKLGRFED 420
Query: 421 ALNVCRKMGRSGVKKDVVTYNALLDGYGKQGKFNEVIRVFNEMKRDGVSPNLLTYSTLID 480
AL VC++MG SGVKKDVVTYNALLDGYGKQGKFNEV RVF EMK+D V PNLLTYSTLID
Sbjct: 421 ALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLID 480
Query: 481 VYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRP 540
VYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAV LLDEM KEGIRP
Sbjct: 481 VYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRP 540
Query: 541 NVITYNSIIDAFGRSTTEESLVEAVGAA----SESPSFIVMEGVDESEIESWVSDHVFKF 600
NV+TYNSIIDAFGRSTT ESLV+ VGA+ SESPSF+++EGVDESEI++W DHVFKF
Sbjct: 541 NVVTYNSIIDAFGRSTTAESLVDVVGASNERQSESPSFMLIEGVDESEIDNWDDDHVFKF 600
Query: 601 YRQLVAEKEGPAKKERLGEEEIRSILRVFKKMHELEIKPNVVTFSAILNACSHCKSIEDA 660
Y+QLV+EKEGPAKKERLG+EEIRSIL VFKKMHELEIKPNVVTFSAILNACS CKSIEDA
Sbjct: 601 YQQLVSEKEGPAKKERLGKEEIRSILSVFKKMHELEIKPNVVTFSAILNACSRCKSIEDA 660
Query: 661 SMLLEELRLFDNQVYGVAHGLLMGFSENVWVQAQCLFDEVKQMDPSTAASFYNALTDMLW 720
SMLLEELRLFDNQVYGVAHGLLMGFSENVW+QAQ LFDEVKQMD STA++FYNALTDMLW
Sbjct: 661 SMLLEELRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVKQMDSSTASAFYNALTDMLW 720
Query: 721 HLGQKRGAQLVVLEGKRRNVWETLWSDSCLDLHLMSSGAAHAMVHAWLLGIHSLVFNGHQ 780
H GQKRGAQLVVLEGKRR VWETLWSDSCLDLHLMSSGAA AMVHAWLLGIHS+VFNGHQ
Sbjct: 721 HFGQKRGAQLVVLEGKRRKVWETLWSDSCLDLHLMSSGAARAMVHAWLLGIHSVVFNGHQ 779
BLAST of Carg13389 vs. ExPASy TrEMBL
Match:
A0A1S3BSC2 (pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103492746 PE=3 SV=1)
HSP 1 Score: 1354.7 bits (3505), Expect = 0.0e+00
Identity = 693/785 (88.28%), Postives = 729/785 (92.87%), Query Frame = 0
Query: 1 MASTPPHCSITTAKPYQTRQYPQNNLKNH-QNPRQNGSWTTTHKVSLVKPLSPTPTHSAT 60
MASTPPHCSITTAKPYQT QYPQNNLKNH QNPRQNG WTTTHK SLVKP TP HSA
Sbjct: 1 MASTPPHCSITTAKPYQTHQYPQNNLKNHRQNPRQNGPWTTTHKFSLVKP--STPGHSAK 60
Query: 61 KSTSTSTSTPLSQSPNFPSLCSL-SSKSDLVSNFSGRRSTRCVSKYHNRRPKSSMATRHT 120
K STSTPLSQSPNF SLCSL +SKS+L SNFSG RSTR VSK+H RPKSSMATRHT
Sbjct: 61 K----STSTPLSQSPNFHSLCSLPTSKSELASNFSGHRSTRFVSKFHFGRPKSSMATRHT 120
Query: 121 AIAEEVLNQALQFGKDDTSLDNILLEFESHLCGSVDYTFLLRELGNRGECWKSIRCFEFA 180
AIAEEVL+Q LQFGKDD SLDNILL FES LCGS DYTFLLRELGNRGECWK+IRCF+FA
Sbjct: 121 AIAEEVLHQLLQFGKDDASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFA 180
Query: 181 LVREGRGNERGKLASAMISTLGRLGKVELAKGVFETALNQGYGNTVYAFSALISAYGKSG 240
LVREGR NE+GKLASAMISTLGRLGKVELAKGVFETAL++GYGNTV+AFSALISAYGKSG
Sbjct: 181 LVREGRKNEKGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSG 240
Query: 241 YFDQAIKVFESMKASGLKPNLVTYNAVIDACGKGGVEFKKVVEVFEEMLRNGVQPDRITY 300
YFD+AIKVFESMK SGLKPNLVTYNAVIDACGKGGVEFK+VVE+FEEMLRNGVQPDRITY
Sbjct: 241 YFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITY 300
Query: 301 NSLLAACSRGGSWEAARNLLNEMVDRGIDQDIITYNTLLDAVCKGGQMNLAFEIMLEMPA 360
NSLLA CSRGG WEAA+NL NEMVDRGIDQD+ TYNTLLDAVCKGGQM+LA+EIMLEMP
Sbjct: 301 NSLLAVCSRGGLWEAAQNLFNEMVDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPG 360
Query: 361 KKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLRIGLDRVSYNTLLSIYAKLGRFED 420
KKILPNVVTYSTMADGYAKAGRLEDALNLYN+MKFL IGLDRVSYNTLLSIYAKLGRFED
Sbjct: 361 KKILPNVVTYSTMADGYAKAGRLEDALNLYNDMKFLGIGLDRVSYNTLLSIYAKLGRFED 420
Query: 421 ALNVCRKMGRSGVKKDVVTYNALLDGYGKQGKFNEVIRVFNEMKRDGVSPNLLTYSTLID 480
AL VC++MG SGVKKDVVTYNALLDGYGKQGKFNEV RVF EMK+D V PNLLTYSTLID
Sbjct: 421 ALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLID 480
Query: 481 VYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRP 540
VYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAV LLDEM KEGIRP
Sbjct: 481 VYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRP 540
Query: 541 NVITYNSIIDAFGRSTTEESLVEAVGAA----SESPSFIVMEGVDESEIESWVSDHVFKF 600
NV+TYNSIIDAFGRSTT ESLV+ VGA+ SESPSF+++EGVDESEI++W DHVFKF
Sbjct: 541 NVVTYNSIIDAFGRSTTAESLVDVVGASNERQSESPSFMLIEGVDESEIDNWDDDHVFKF 600
Query: 601 YRQLVAEKEGPAKKERLGEEEIRSILRVFKKMHELEIKPNVVTFSAILNACSHCKSIEDA 660
Y+QLV+EKEGPAKKERLG+EEIRSIL VFKKMHELEIKPNVVTFSAILNACS CKSIEDA
Sbjct: 601 YQQLVSEKEGPAKKERLGKEEIRSILSVFKKMHELEIKPNVVTFSAILNACSRCKSIEDA 660
Query: 661 SMLLEELRLFDNQVYGVAHGLLMGFSENVWVQAQCLFDEVKQMDPSTAASFYNALTDMLW 720
SMLLEELRLFDNQVYGVAHGLLMGFSENVW+QAQ LFDEVKQMD STA++FYNALTDMLW
Sbjct: 661 SMLLEELRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVKQMDSSTASAFYNALTDMLW 720
Query: 721 HLGQKRGAQLVVLEGKRRNVWETLWSDSCLDLHLMSSGAAHAMVHAWLLGIHSLVFNGHQ 780
H GQKRGAQLVVLEGKRR VWETLWSDSCLDLHLMSSGAA AMVHAWLLGIHS+VFNGHQ
Sbjct: 721 HFGQKRGAQLVVLEGKRRKVWETLWSDSCLDLHLMSSGAARAMVHAWLLGIHSVVFNGHQ 779
BLAST of Carg13389 vs. TAIR 10
Match:
AT2G31400.1 (genomes uncoupled 1 )
HSP 1 Score: 943.7 bits (2438), Expect = 9.2e-275
Identity = 495/784 (63.14%), Postives = 596/784 (76.02%), Query Frame = 0
Query: 7 HCSITTAKPYQTRQYPQNNLKNHQNPRQNGSWTTTHKVSLVKP--------LSPTPTHSA 66
H S TT + Q P+++ Q+ R T H+ + P S +P SA
Sbjct: 44 HLSQTTPN-FSPLQTPKSDFSGRQSTRFVSPATNNHRQTRQNPNYNHRPYGASSSPRGSA 103
Query: 67 TKSTSTSTSTP--LSQSPNFPSLCSLSSKSDLVSNFSGRRSTRCVSKYHNRRPKSSMATR 126
+S +T P LSQ PNF L + KSDL S+FSGRRSTR VSK H R K++MATR
Sbjct: 104 PPPSSVATVAPAQLSQPPNFSPL--QTPKSDLSSDFSGRRSTRFVSKMHFGRQKTTMATR 163
Query: 127 HTAIAEEVLNQALQFGKDDTSLDNILLEFESHLCGSVDYTFLLRELGNRGECWKSIRCFE 186
H++ AE+ L A+ F DD +++L FES LCGS D T+++RELGNR EC K++ +E
Sbjct: 164 HSSAAEDALQNAIDFSGDDEMFHSLMLSFESKLCGSDDCTYIIRELGNRNECDKAVGFYE 223
Query: 187 FALVREGRGNERGKLASAMISTLGRLGKVELAKGVFETALNQGYGNTVYAFSALISAYGK 246
FA+ RE R NE+GKLASAMISTLGR GKV +AK +FETA GYGNTVYAFSALISAYG+
Sbjct: 224 FAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGR 283
Query: 247 SGYFDQAIKVFESMKASGLKPNLVTYNAVIDACGKGGVEFKKVVEVFEEMLRNGVQPDRI 306
SG ++AI VF SMK GL+PNLVTYNAVIDACGKGG+EFK+V + F+EM RNGVQPDRI
Sbjct: 284 SGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRI 343
Query: 307 TYNSLLAACSRGGSWEAARNLLNEMVDRGIDQDIITYNTLLDAVCKGGQMNLAFEIMLEM 366
T+NSLLA CSRGG WEAARNL +EM +R I+QD+ +YNTLLDA+CKGGQM+LAFEI+ +M
Sbjct: 344 TFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQM 403
Query: 367 PAKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLRIGLDRVSYNTLLSIYAKLGRF 426
P K+I+PNVV+YST+ DG+AKAGR ++ALNL+ EM++L I LDRVSYNTLLSIY K+GR
Sbjct: 404 PVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRS 463
Query: 427 EDALNVCRKMGRSGVKKDVVTYNALLDGYGKQGKFNEVIRVFNEMKRDGVSPNLLTYSTL 486
E+AL++ R+M G+KKDVVTYNALL GYGKQGK++EV +VF EMKR+ V PNLLTYSTL
Sbjct: 464 EEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTL 523
Query: 487 IDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGI 546
ID YSKG LY+EAME+FREFK AGL+ADVVLYS LI+ALCKNGLV SAVSL+DEM KEGI
Sbjct: 524 IDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGI 583
Query: 547 RPNVITYNSIIDAFGRSTTEESLVEAVGAASESPSFIVMEGVDESEIESWVSDHVFKFYR 606
PNV+TYNSIIDAFGRS T + + S S + + E+E + V + +
Sbjct: 584 SPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETE-----GNRVIQLFG 643
Query: 607 QLVAEKEGPAKKE-RLGEEEIRSILRVFKKMHELEIKPNVVTFSAILNACSHCKSIEDAS 666
QL E K+ G +E+ IL VF+KMH+LEIKPNVVTFSAILNACS C S EDAS
Sbjct: 644 QLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDAS 703
Query: 667 MLLEELRLFDNQVYGVAHGLLMGFSENVWVQAQCLFDEVKQMDPSTAASFYNALTDMLWH 726
MLLEELRLFDN+VYGV HGLLMG ENVW+QAQ LFD+V +MD STA++FYNALTDMLWH
Sbjct: 704 MLLEELRLFDNKVYGVVHGLLMGQRENVWLQAQSLFDKVNEMDGSTASAFYNALTDMLWH 763
Query: 727 LGQKRGAQLVVLEGKRRNVWETLWSDSCLDLHLMSSGAAHAMVHAWLLGIHSLVFNGHQL 780
GQKRGA+LV LEG+ R VWE +WSDSCLDLHLMSSGAA AMVHAWLL I S+V+ GH+L
Sbjct: 764 FGQKRGAELVALEGRSRQVWENVWSDSCLDLHLMSSGAARAMVHAWLLNIRSIVYEGHEL 819
BLAST of Carg13389 vs. TAIR 10
Match:
AT1G74850.1 (plastid transcriptionally active 2 )
HSP 1 Score: 285.0 bits (728), Expect = 1.8e-76
Identity = 175/658 (26.60%), Postives = 343/658 (52.13%), Query Frame = 0
Query: 154 DYTFLLRELGNRGECWKSIRCFEFALVREGRGNERGKLASAMISTLGRLGKVELAKGVFE 213
D+ + +E RG+ +S+R F++ + R+ + + MIS LGR G ++ VF+
Sbjct: 107 DFALVFKEFAGRGDWQRSLRLFKY-MQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFD 166
Query: 214 TALNQGYGNTVYAFSALISAYGKSGYFDQAIKVFESMKASGLKPNLVTYNAVIDACGKGG 273
+QG +V++++ALI+AYG++G ++ ++++ + MK + P+++TYN VI+AC +GG
Sbjct: 167 EMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGG 226
Query: 274 VEFKKVVEVFEEMLRNGVQPDRITYNSLLAACSRGGSWEAARNLLNEMVDRGIDQDIITY 333
++++ ++ +F EM G+QPD +TYN+LL+AC+ G + A + M D GI D+ TY
Sbjct: 227 LDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTY 286
Query: 334 NTLLDAVCKGGQMNLAFEIMLEMPAKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKF 393
+ L++ K ++ +++ EM + LP++ +Y+ + + YAK+G +++A+ ++++M+
Sbjct: 287 SHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQA 346
Query: 394 LRIGLDRVSYNTLLSIYAKLGRFEDALNVCRKMGRSGVKKDVVTYNALLDGYGKQGKFNE 453
+ +Y+ LL+++ + GR++D + +M S D TYN L++ +G+ G F E
Sbjct: 347 AGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKE 406
Query: 454 VIRVFNEMKRDGVSPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELIN 513
V+ +F++M + + P++ TY +I KG L+E+A ++ + + Y+ +I
Sbjct: 407 VVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIE 466
Query: 514 ALCKNGLVDSAVSLLDEMIKEGIRPNVITYNSIIDAFGRSTTEESLVEAVGAASESPSFI 573
A + L + A+ + M + G P++ T++S++ +F R G ES
Sbjct: 467 AFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARG----------GLVKES---- 526
Query: 574 VMEGVDESEIESWVSDHVFKFYRQLVAEKEGPAKKERL-------------GEEEIRSIL 633
E + ++S + + F Q+ A K+G +E + E + ++L
Sbjct: 527 --EAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVL 586
Query: 634 RV-------------FKKMHELEIKPNVVTFSAILNACSHCKSIEDASMLLEE-LRLFDN 693
V F++M +I P+++ + +L + +D + LLEE L +
Sbjct: 587 SVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRVS 646
Query: 694 QVYGVAHGLLMG--FSENVWVQAQCLFDEVKQMDPSTAASFYNALTDMLWHLGQKRGAQL 753
++ V ++ G ++ W + + D++ FYNAL D LW LGQK A
Sbjct: 647 NIHQVIGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDALWWLGQKERAAR 706
Query: 754 VVLEGKRRNVWETLWSDSCL----DLHLMSSGAAHAMVHAWLLGIHSLVFNGHQLPKL 779
V+ E +R ++ L+ + L D+H MS G + + WL I+ ++ G LP+L
Sbjct: 707 VLNEATKRGLFPELFRKNKLVWSVDVHRMSEGGMYTALSVWLNDINDMLLKG-DLPQL 746
BLAST of Carg13389 vs. TAIR 10
Match:
AT5G02860.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 253.1 bits (645), Expect = 7.5e-67
Identity = 183/691 (26.48%), Postives = 333/691 (48.19%), Query Frame = 0
Query: 48 KPLSPTPTH--SATKSTSTSTSTP-------------LSQSPNFPSLCSLSSKSDLVSNF 107
KP S H S T +TS S+P L Q+PN S+ + S
Sbjct: 18 KPYSHDQNHHISRTPFLTTSLSSPPPPPVEPLLHDVFLHQNPN--------SRQPISSQT 77
Query: 108 SGRRSTRCVSKYHNRRPKSSMATRHTAIA---EEVLNQALQFGKDDTSLDNILLEF---- 167
S R+ + K +R P + ++ ++VL ++ D LD++L E
Sbjct: 78 SRNRNRTRIGK--SRDPNLGKPWSYHGLSPQGQQVLRSLIEPNFDSGQLDSVLSELFEPF 137
Query: 168 -ESHLCGSVDYTFLLRELGNRGECWKSIRCFE-FALVREGRGNERGKLASAMISTLGRLG 227
+ S + L+ LG + ++R F+ F ++ + + + +IS LG+ G
Sbjct: 138 KDKPESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEG 197
Query: 228 KVELAKGVFETALNQGYGNTVYAFSALISAYGKSGYFDQAIKVFESMKASGLKPNLVTYN 287
+V A +F G+ VY++++LISA+ SG + +A+ VF+ M+ G KP L+TYN
Sbjct: 198 RVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYN 257
Query: 288 AVIDACGKGGVEFKKVVEVFEEMLRNGVQPDRITYNSLLAACSRGGSWEAARNLLNEMVD 347
+++ GK G + K+ + E+M +G+ PD TYN+L+ C RG + A + EM
Sbjct: 258 VILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKA 317
Query: 348 RGIDQDIITYNTLLDAVCKGGQMNLAFEIMLEMPAKKILPNVVTYSTMADGYAKAGRLED 407
G D +TYN LLD K + A +++ EM P++VTY+++ YA+ G L++
Sbjct: 318 AGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDE 377
Query: 408 ALNLYNEMKFLRIGLDRVSYNTLLSIYAKLGRFEDALNVCRKMGRSGVKKDVVTYNALLD 467
A+ L N+M D +Y TLLS + + G+ E A+++ +M +G K ++ T+NA +
Sbjct: 378 AMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIK 437
Query: 468 GYGKQGKFNEVIRVFNEMKRDGVSPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKA 527
YG +GKF E++++F+E+ G+SP+++T++TL+ V+ + + E VF+E K+AG
Sbjct: 438 MYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVP 497
Query: 528 DVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPNVITYNSIIDAFGRSTTEESLVEAV 587
+ ++ LI+A + G + A+++ M+ G+ P++ TYN+++ A R
Sbjct: 498 ERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALAR----------- 557
Query: 588 GAASESPSFIVMEGVDESEIESWVSDHVFKFYRQLVAEKEGPAKKERLGEEEIRSILRVF 647
G E ++ E D + + L A G +EI + +
Sbjct: 558 GGMWEQSEKVLAEMED-----GRCKPNELTYCSLLHAYANG---------KEIGLMHSLA 617
Query: 648 KKMHELEIKPNVVTFSAILNACSHCKSIEDASMLLEEL--RLFDNQVYGVAHGLLMGFSE 707
++++ I+P V ++ CS C + +A EL R F + + + +
Sbjct: 618 EEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRR 673
Query: 708 NVWVQAQCLFDEVKQMDPSTAASFYNALTDM 713
+ +A + D +K+ + + + YN+L M
Sbjct: 678 QMVAKANGVLDYMKERGFTPSMATYNSLMYM 673
BLAST of Carg13389 vs. TAIR 10
Match:
AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 219.5 bits (558), Expect = 9.1e-57
Identity = 128/453 (28.26%), Postives = 230/453 (50.77%), Query Frame = 0
Query: 222 NTVYAFSALISAYGKSGYFDQAIKVFESMKASGLKPNLVTYNAVIDACGKGGVEFKKVVE 281
+T F ++ +Y + D+A+ + +A G P +++YNAV+DA +
Sbjct: 132 STSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAEN 191
Query: 282 VFEEMLRNGVQPDRITYNSLLAACSRGGSWEAARNLLNEMVDRGIDQDIITYNTLLDAVC 341
VF+EML + V P+ TYN L+ G+ + A L ++M +G +++TYNTL+D C
Sbjct: 192 VFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYC 251
Query: 342 KGGQMNLAFEIMLEMPAKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLRIGLDRV 401
K +++ F+++ M K + PN+++Y+ + +G + GR+++ + EM LD V
Sbjct: 252 KLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEV 311
Query: 402 SYNTLLSIYAKLGRFEDALNVCRKMGRSGVKKDVVTYNALLDGYGKQGKFNEVIRVFNEM 461
+YNTL+ Y K G F AL + +M R G+ V+TY +L+ K G N + ++M
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM 371
Query: 462 KRDGVSPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLV 521
+ G+ PN TY+TL+D +S+ EA V RE G VV Y+ LIN C G +
Sbjct: 372 RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKM 431
Query: 522 DSAVSLLDEMIKEGIRPNVITYNSIIDAFGRSTTEESLVEAVGAASE---SPSFIVMEGV 581
+ A+++L++M ++G+ P+V++Y++++ F RS + + E P I +
Sbjct: 432 EDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSL 491
Query: 582 DESEIESWVSDHVFKFYRQLVAEKEGPAK-------KERLGEEEIRSILRVFKKMHELEI 641
+ E + Y +++ P + E ++ L++ +M E +
Sbjct: 492 IQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGV 551
Query: 642 KPNVVTFSAILNACSHCKSIEDASMLLEELRLF 665
P+VVT+S ++N + +A LL L+LF
Sbjct: 552 LPDVVTYSVLINGLNKQSRTREAKRLL--LKLF 582
BLAST of Carg13389 vs. TAIR 10
Match:
AT1G12620.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 217.2 bits (552), Expect = 4.5e-56
Identity = 133/523 (25.43%), Postives = 252/523 (48.18%), Query Frame = 0
Query: 193 SAMISTLGRLGKVELAKGVFETALNQGYGNTVYAFSALISAYGKSGYFDQAIKVFESMKA 252
S MI+ R K+ LA + GY FS LI+ G +A+++ + M
Sbjct: 111 SIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVE 170
Query: 253 SGLKPNLVTYNAVIDACGKGGVEFKKVVEVFEEMLRNGVQPDRITYNSLLAACSRGGSWE 312
G KP L+T NA+++ G + V + + M+ G QP+ +TY +L + G
Sbjct: 171 MGHKPTLITLNALVNGLCLNG-KVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTA 230
Query: 313 AARNLLNEMVDRGIDQDIITYNTLLDAVCKGGQMNLAFEIMLEMPAKKILPNVVTYSTMA 372
A LL +M +R I D + Y+ ++D +CK G ++ AF + EM K +++ Y+T+
Sbjct: 231 LAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLI 290
Query: 373 DGYAKAGRLEDALNLYNEMKFLRIGLDRVSYNTLLSIYAKLGRFEDALNVCRKMGRSGVK 432
G+ AGR +D L +M +I D V+++ L+ + K G+ +A + ++M + G+
Sbjct: 291 RGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 350
Query: 433 KDVVTYNALLDGYGKQGKFNEVIRVFNEMKRDGVSPNLLTYSTLIDVYSKGSLYEEAMEV 492
D VTY +L+DG+ K+ + ++ + + M G PN+ T++ LI+ Y K +L ++ +E+
Sbjct: 351 PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLEL 410
Query: 493 FREFKQAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPNVITYNSIIDAFGR 552
FR+ G+ AD V Y+ LI C+ G ++ A L EM+ +RP++++Y ++D
Sbjct: 411 FRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCD 470
Query: 553 STTEESLVEAVGAASESPSFIVMEGVDESEIESWVSDHVFKFYRQLVAEKEGPAKKERLG 612
+ E +E + E +++S++E + + + A K
Sbjct: 471 NGEPEKALE------------IFEKIEKSKMELDIGIYNIIIHGMCNASK---------- 530
Query: 613 EEEIRSILRVFKKMHELEIKPNVVTFSAILNACSHCKSIEDASMLLEELRLFDNQVYGVA 672
+ +F + +KP+V T++ ++ S+ +A +L ++ + G
Sbjct: 531 ---VDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCT 590
Query: 673 HGLLM--GFSENVWVQAQCLFDEVKQMDPSTAASFYNALTDML 714
+ +L+ E ++ L +E+K+ S AS + DML
Sbjct: 591 YNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML 607
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7025599.1 | 0.0e+00 | 100.00 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
XP_022960194.1 | 0.0e+00 | 99.36 | pentatricopeptide repeat-containing protein At2g31400, chloroplastic-like [Cucur... | [more] |
KAG6593248.1 | 0.0e+00 | 98.85 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
XP_023004451.1 | 0.0e+00 | 98.97 | pentatricopeptide repeat-containing protein At2g31400, chloroplastic-like [Cucur... | [more] |
XP_023513984.1 | 0.0e+00 | 98.85 | pentatricopeptide repeat-containing protein At2g31400, chloroplastic-like [Cucur... | [more] |
Match Name | E-value | Identity | Description | |
Q9SIC9 | 1.3e-273 | 63.14 | Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidop... | [more] |
Q9S7Q2 | 2.5e-75 | 26.60 | Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidop... | [more] |
Q9LYZ9 | 1.1e-65 | 26.48 | Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX... | [more] |
Q9FIX3 | 1.3e-55 | 28.26 | Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX... | [more] |
Q9ASZ8 | 6.4e-55 | 25.43 | Pentatricopeptide repeat-containing protein At1g12620 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1HA78 | 0.0e+00 | 99.36 | pentatricopeptide repeat-containing protein At2g31400, chloroplastic-like OS=Cuc... | [more] |
A0A6J1KS61 | 0.0e+00 | 98.97 | pentatricopeptide repeat-containing protein At2g31400, chloroplastic-like OS=Cuc... | [more] |
A0A6J1D2T9 | 0.0e+00 | 88.41 | pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Momordic... | [more] |
A0A5A7TZ92 | 0.0e+00 | 88.28 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3BSC2 | 0.0e+00 | 88.28 | pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Cucumis ... | [more] |