Carg13382 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg13382
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	CP12 domain-containing protein
Location	Carg_Chr08: 2456734 .. 2457111 (+)
RNA-Seq Expression	Carg13382
Synteny	Carg13382

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCGATTTCCGGCACGGCGACGGCAGCCTTAAAAGCGGTGGCTGACACGCAGAATCCCGAATCGCCGGTCCTCCGATCCACCCGGCTCAGCTACCAGTGTAAGCGATGGACTGCCGGTCGGATCAGTGTAGTTGGACCGGTGGCGGCCGCCCCGGACCGGATATCGGAGAAGGTGGTGGAGAGCATAAAGAACGCGGAGGAGACGTGCTCGGATGATCCAGAAAGTGGGGAGTGTGCGGCGGCGTGGGATGAGGTGGAGGAGCTCAGCGCCGCCGCTAGCCACGCACGTGACCGGCTGAAGGATGCGGACCCGCTCGAGGAGTTTTGTAAGGATAATCCCGAGACGGAGGAGTGTCGCACGTACGAGGACTAA

mRNA sequence

ATGGCGGCGATTTCCGGCACGGCGACGGCAGCCTTAAAAGCGGTGGCTGACACGCAGAATCCCGAATCGCCGGTCCTCCGATCCACCCGGCTCAGCTACCAGTGTAAGCGATGGACTGCCGGTCGGATCAGTGTAGTTGGACCGGTGGCGGCCGCCCCGGACCGGATATCGGAGAAGGTGGTGGAGAGCATAAAGAACGCGGAGGAGACGTGCTCGGATGATCCAGAAAGTGGGGAGTGTGCGGCGGCGTGGGATGAGGTGGAGGAGCTCAGCGCCGCCGCTAGCCACGCACGTGACCGGCTGAAGGATGCGGACCCGCTCGAGGAGTTTTGTAAGGATAATCCCGAGACGGAGGAGTGTCGCACGTACGAGGACTAA

Coding sequence (CDS)

ATGGCGGCGATTTCCGGCACGGCGACGGCAGCCTTAAAAGCGGTGGCTGACACGCAGAATCCCGAATCGCCGGTCCTCCGATCCACCCGGCTCAGCTACCAGTGTAAGCGATGGACTGCCGGTCGGATCAGTGTAGTTGGACCGGTGGCGGCCGCCCCGGACCGGATATCGGAGAAGGTGGTGGAGAGCATAAAGAACGCGGAGGAGACGTGCTCGGATGATCCAGAAAGTGGGGAGTGTGCGGCGGCGTGGGATGAGGTGGAGGAGCTCAGCGCCGCCGCTAGCCACGCACGTGACCGGCTGAAGGATGCGGACCCGCTCGAGGAGTTTTGTAAGGATAATCCCGAGACGGAGGAGTGTCGCACGTACGAGGACTAA

Protein sequence

MAAISGTATAALKAVADTQNPESPVLRSTRLSYQCKRWTAGRISVVGPVAAAPDRISEKVVESIKNAEETCSDDPESGECAAAWDEVEELSAAASHARDRLKDADPLEEFCKDNPETEECRTYED

Homology

[Close]

BLAST of Carg13382 vs. NCBI nr
Match: KAG7025592.1 (Calvin cycle protein CP12-1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 243.4 bits (620), Expect = 1.0e-60
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0


Query: 1   MAAISGTATAALKAVADTQNPESPVLRSTRLSYQCKRWTAGRISVVGPVAAAPDRISEKV 60
           MAAISGTATAALKAVADTQNPESPVLRSTRLSYQCKRWTAGRISVVGPVAAAPDRISEKV
Sbjct: 1   MAAISGTATAALKAVADTQNPESPVLRSTRLSYQCKRWTAGRISVVGPVAAAPDRISEKV 60

Query: 61  VESIKNAEETCSDDPESGECAAAWDEVEELSAAASHARDRLKDADPLEEFCKDNPETEEC 120
           VESIKNAEETCSDDPESGECAAAWDEVEELSAAASHARDRLKDADPLEEFCKDNPETEEC
Sbjct: 61  VESIKNAEETCSDDPESGECAAAWDEVEELSAAASHARDRLKDADPLEEFCKDNPETEEC 120

Query: 121 RTYED 126
           RTYED
Sbjct: 121 RTYED 125

[Close]

BLAST of Carg13382 vs. NCBI nr
Match: KAG6593241.1 (Calvin cycle protein CP12-1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 241.1 bits (614), Expect = 5.1e-60
Identity = 124/125 (99.20%), Postives = 124/125 (99.20%), Query Frame = 0


Query: 1   MAAISGTATAALKAVADTQNPESPVLRSTRLSYQCKRWTAGRISVVGPVAAAPDRISEKV 60
           MAAISGTATAALKAVADTQ PESPVLRSTRLSYQCKRWTAGRISVVGPVAAAPDRISEKV
Sbjct: 1   MAAISGTATAALKAVADTQKPESPVLRSTRLSYQCKRWTAGRISVVGPVAAAPDRISEKV 60

Query: 61  VESIKNAEETCSDDPESGECAAAWDEVEELSAAASHARDRLKDADPLEEFCKDNPETEEC 120
           VESIKNAEETCSDDPESGECAAAWDEVEELSAAASHARDRLKDADPLEEFCKDNPETEEC
Sbjct: 61  VESIKNAEETCSDDPESGECAAAWDEVEELSAAASHARDRLKDADPLEEFCKDNPETEEC 120

Query: 121 RTYED 126
           RTYED
Sbjct: 121 RTYED 125

[Close]

BLAST of Carg13382 vs. NCBI nr
Match: XP_023514969.1 (calvin cycle protein CP12-1, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 228.0 bits (580), Expect = 4.4e-56
Identity = 118/125 (94.40%), Postives = 120/125 (96.00%), Query Frame = 0


Query: 1   MAAISGTATAALKAVADTQNPESPVLRSTRLSYQCKRWTAGRISVVGPVAAAPDRISEKV 60
           MAAISGT  AALKAVAD+Q PESPVLR TRLSY+ KRWTAGRISVVGPVAAAPDRISEKV
Sbjct: 1   MAAISGTTVAALKAVADSQKPESPVLRFTRLSYKWKRWTAGRISVVGPVAAAPDRISEKV 60

Query: 61  VESIKNAEETCSDDPESGECAAAWDEVEELSAAASHARDRLKDADPLEEFCKDNPETEEC 120
           VESIKNAEETCSDDPESGECAAAWDEVEELSAAASHARDRLKDADPLEEFCKDNPETEEC
Sbjct: 61  VESIKNAEETCSDDPESGECAAAWDEVEELSAAASHARDRLKDADPLEEFCKDNPETEEC 120

Query: 121 RTYED 126
           RTYED
Sbjct: 121 RTYED 125

[Close]

BLAST of Carg13382 vs. NCBI nr
Match: XP_023004695.1 (calvin cycle protein CP12-1, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 228.0 bits (580), Expect = 4.4e-56
Identity = 117/125 (93.60%), Postives = 119/125 (95.20%), Query Frame = 0


Query: 1   MAAISGTATAALKAVADTQNPESPVLRSTRLSYQCKRWTAGRISVVGPVAAAPDRISEKV 60
           MAAISGT  AALKAVAD+Q PESPVLRSTRLSYQ KRWTAGR+SV GP AAAPDRISEKV
Sbjct: 1   MAAISGTTMAALKAVADSQKPESPVLRSTRLSYQWKRWTAGRVSVAGPAAAAPDRISEKV 60

Query: 61  VESIKNAEETCSDDPESGECAAAWDEVEELSAAASHARDRLKDADPLEEFCKDNPETEEC 120
           VESIKNAEETCSDDPESGECAAAWDEVEELSAAASHARDRLKDADPLEEFCKDNPETEEC
Sbjct: 61  VESIKNAEETCSDDPESGECAAAWDEVEELSAAASHARDRLKDADPLEEFCKDNPETEEC 120

Query: 121 RTYED 126
           RTYED
Sbjct: 121 RTYED 125

[Close]

BLAST of Carg13382 vs. NCBI nr
Match: XP_022960418.1 (calvin cycle protein CP12-1, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 223.0 bits (567), Expect = 1.4e-54
Identity = 112/113 (99.12%), Postives = 112/113 (99.12%), Query Frame = 0


Query: 13  KAVADTQNPESPVLRSTRLSYQCKRWTAGRISVVGPVAAAPDRISEKVVESIKNAEETCS 72
           KAVADTQ PESPVLRSTRLSYQCKRWTAGRISVVGPVAAAPDRISEKVVESIKNAEETCS
Sbjct: 21  KAVADTQKPESPVLRSTRLSYQCKRWTAGRISVVGPVAAAPDRISEKVVESIKNAEETCS 80

Query: 73  DDPESGECAAAWDEVEELSAAASHARDRLKDADPLEEFCKDNPETEECRTYED 126
           DDPESGECAAAWDEVEELSAAASHARDRLKDADPLEEFCKDNPETEECRTYED
Sbjct: 81  DDPESGECAAAWDEVEELSAAASHARDRLKDADPLEEFCKDNPETEECRTYED 133

[Close]

BLAST of Carg13382 vs. ExPASy Swiss-Prot
Match: O22914 (Calvin cycle protein CP12-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP12-1 PE=1 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.2e-24
Identity = 64/107 (59.81%), Postives = 79/107 (73.83%), Query Frame = 0


Query: 21  PESPVLRSTRLSYQCKRWTAGRISVVGPVAAAPDRISEKVVESIKNAEETCSDDPESGEC 80
           P + VL   RL+Y  K  +  R+ VV   A +   ISEKV +SI+ A+ETC+DDP SGEC
Sbjct: 20  PVARVLGPVRLNYPWKFGSMKRMVVV--KATSEGEISEKVEKSIQEAKETCADDPVSGEC 79

Query: 81  AAAWDEVEELSAAASHARDRLK--DADPLEEFCKDNPETEECRTYED 126
            AAWDEVEELSAAASHARD+ K   +DPLEE+C DNPET+ECRTY++
Sbjct: 80  VAAWDEVEELSAAASHARDKKKAGGSDPLEEYCNDNPETDECRTYDN 124

[Close]

BLAST of Carg13382 vs. ExPASy Swiss-Prot
Match: Q9LZP9 (Calvin cycle protein CP12-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP12-2 PE=1 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 3.0e-23
Identity = 58/90 (64.44%), Postives = 71/90 (78.89%), Query Frame = 0


Query: 39  TAGRISVVGPVAAAPD-RISEKVVESIKNAEETCSDDPESGECAAAWDEVEELSAAASHA 98
           T  R+  + P+ AAP+  IS+ V +SIK A+ETC+ DP SGEC AAWDEVEELSAAASHA
Sbjct: 42  TTNRMMKLQPIKAAPEGGISDVVEKSIKEAQETCAGDPVSGECVAAWDEVEELSAAASHA 101

Query: 99  RDRLK--DADPLEEFCKDNPETEECRTYED 126
           RD+ K   +DPLEE+CKDNPET ECRTY++
Sbjct: 102 RDKKKADGSDPLEEYCKDNPETNECRTYDN 131

[Close]

BLAST of Carg13382 vs. ExPASy Swiss-Prot
Match: Q9C9K2 (Calvin cycle protein CP12-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP12-3 PE=1 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 4.8e-13
Identity = 38/74 (51.35%), Postives = 51/74 (68.92%), Query Frame = 0


Query: 54  DRISEKVVESIKNAEETCSDDPESGECAAAWDEVEELSAAASHARDRLK--DADPLEEFC 113
           +++SE + E +K A E C  +  S EC  AWDEVEE+S A +  R +LK  + DPLE FC
Sbjct: 61  EKLSEMIEEKVKEATEVCEAEEMSEECRVAWDEVEEVSQARADLRIKLKLLNQDPLESFC 120

Query: 114 KDNPETEECRTYED 126
           ++NPET+ECR YED
Sbjct: 121 QENPETDECRIYED 134

[Close]

BLAST of Carg13382 vs. ExPASy Swiss-Prot
Match: A6Q0K5 (Calvin cycle protein CP12, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN=CP12 PE=1 SV=2)

HSP 1 Score: 72.8 bits (177), Expect = 3.1e-12
Identity = 45/104 (43.27%), Postives = 63/104 (60.58%), Query Frame = 0


Query: 27  RSTRLSYQCKRWTAGRISVVGPVAAAPD-RISEKVVESIKNAEETCSDDPESGECAAAWD 86
           +S  +S    R  + R +VV   +  P   +++KV +++K AE+ C+    S +CA AWD
Sbjct: 5   KSVVISRPAVRPVSTRRAVVVRASGQPAVDLNKKVQDAVKEAEDACAKG-TSADCAVAWD 64

Query: 87  EVEELSAAASHARDRLKD----ADPLEEFCKDNPETEECRTYED 126
            VEELSAA SH +D +K      DPLE FCKD P+ +ECR YED
Sbjct: 65  TVEELSAAVSHKKDAVKADVTLTDPLEAFCKDAPDADECRVYED 107

[Close]

BLAST of Carg13382 vs. ExPASy TrEMBL
Match: A0A6J1KVB2 (calvin cycle protein CP12-1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111497914 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 2.1e-56
Identity = 117/125 (93.60%), Postives = 119/125 (95.20%), Query Frame = 0


Query: 1   MAAISGTATAALKAVADTQNPESPVLRSTRLSYQCKRWTAGRISVVGPVAAAPDRISEKV 60
           MAAISGT  AALKAVAD+Q PESPVLRSTRLSYQ KRWTAGR+SV GP AAAPDRISEKV
Sbjct: 1   MAAISGTTMAALKAVADSQKPESPVLRSTRLSYQWKRWTAGRVSVAGPAAAAPDRISEKV 60

Query: 61  VESIKNAEETCSDDPESGECAAAWDEVEELSAAASHARDRLKDADPLEEFCKDNPETEEC 120
           VESIKNAEETCSDDPESGECAAAWDEVEELSAAASHARDRLKDADPLEEFCKDNPETEEC
Sbjct: 61  VESIKNAEETCSDDPESGECAAAWDEVEELSAAASHARDRLKDADPLEEFCKDNPETEEC 120

Query: 121 RTYED 126
           RTYED
Sbjct: 121 RTYED 125

[Close]

BLAST of Carg13382 vs. ExPASy TrEMBL
Match: A0A6J1H8V6 (calvin cycle protein CP12-1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111461153 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 6.9e-55
Identity = 112/113 (99.12%), Postives = 112/113 (99.12%), Query Frame = 0


Query: 13  KAVADTQNPESPVLRSTRLSYQCKRWTAGRISVVGPVAAAPDRISEKVVESIKNAEETCS 72
           KAVADTQ PESPVLRSTRLSYQCKRWTAGRISVVGPVAAAPDRISEKVVESIKNAEETCS
Sbjct: 21  KAVADTQKPESPVLRSTRLSYQCKRWTAGRISVVGPVAAAPDRISEKVVESIKNAEETCS 80

Query: 73  DDPESGECAAAWDEVEELSAAASHARDRLKDADPLEEFCKDNPETEECRTYED 126
           DDPESGECAAAWDEVEELSAAASHARDRLKDADPLEEFCKDNPETEECRTYED
Sbjct: 81  DDPESGECAAAWDEVEELSAAASHARDRLKDADPLEEFCKDNPETEECRTYED 133

[Close]

BLAST of Carg13382 vs. ExPASy TrEMBL
Match: A0A6J1JWF5 (calvin cycle protein CP12-1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111488107 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 3.1e-47
Identity = 102/125 (81.60%), Postives = 110/125 (88.00%), Query Frame = 0


Query: 1   MAAISGTATAALKAVADTQNPESPVLRSTRLSYQCKRWTAGRISVVGPVAAAPDRISEKV 60
           MAAISG   A  KAVAD+   ESPVLRS RL+Y  KRW+A R+  VGPV+AAPDRISEKV
Sbjct: 1   MAAISGATMAVSKAVADSPKLESPVLRSARLNYPWKRWSAVRLCAVGPVSAAPDRISEKV 60

Query: 61  VESIKNAEETCSDDPESGECAAAWDEVEELSAAASHARDRLKDADPLEEFCKDNPETEEC 120
           VESIKNAEETCS+DP SGECAAAWDEVEELSAAASHARDRLKD+DPLE+FCKDNPETEEC
Sbjct: 61  VESIKNAEETCSEDPASGECAAAWDEVEELSAAASHARDRLKDSDPLEDFCKDNPETEEC 120

Query: 121 RTYED 126
           RTYED
Sbjct: 121 RTYED 125

[Close]

BLAST of Carg13382 vs. ExPASy TrEMBL
Match: A0A5A7TUE8 (Calvin cycle protein CP12-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G001700 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 5.9e-46
Identity = 99/116 (85.34%), Postives = 105/116 (90.52%), Query Frame = 0


Query: 10  AALKAVADTQNPESPVLRSTRLSYQCKRWTAGRISVVGPVAAAPDRISEKVVESIKNAEE 69
           AA KAV D+   ESPV RS+RLSY  KRWT+GR+S VGPVAAAPDRISEKVVESIKNAE 
Sbjct: 2   AATKAVTDSPKIESPVHRSSRLSYPWKRWTSGRMSAVGPVAAAPDRISEKVVESIKNAEV 61

Query: 70  TCSDDPESGECAAAWDEVEELSAAASHARDRLKDADPLEEFCKDNPETEECRTYED 126
           TCS+DP SGECAAAWDEVEELSAAASHARDRLKDADPLE+FCKDNPETEECRTYED
Sbjct: 62  TCSEDPASGECAAAWDEVEELSAAASHARDRLKDADPLEDFCKDNPETEECRTYED 117

[Close]

BLAST of Carg13382 vs. ExPASy TrEMBL
Match: A0A6J1GQL5 (calvin cycle protein CP12-1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111456202 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 5.9e-46
Identity = 101/125 (80.80%), Postives = 108/125 (86.40%), Query Frame = 0


Query: 1   MAAISGTATAALKAVADTQNPESPVLRSTRLSYQCKRWTAGRISVVGPVAAAPDRISEKV 60
           MAAISG   A  KAVAD+   ES VLRS RL Y  KRW+A R+  VGPV+AAPDRISEKV
Sbjct: 1   MAAISGATMAVSKAVADSPKLESTVLRSARLYYPWKRWSAVRLRAVGPVSAAPDRISEKV 60

Query: 61  VESIKNAEETCSDDPESGECAAAWDEVEELSAAASHARDRLKDADPLEEFCKDNPETEEC 120
           VESIKNAEETCS+DP SGECAAAWDEVEELSAAASHARDRLKD+DPLE+FCKDNPETEEC
Sbjct: 61  VESIKNAEETCSEDPASGECAAAWDEVEELSAAASHARDRLKDSDPLEDFCKDNPETEEC 120

Query: 121 RTYED 126
           RTYED
Sbjct: 121 RTYED 125

[Close]

BLAST of Carg13382 vs. TAIR 10
Match: AT2G47400.1 (CP12 domain-containing protein 1 )

HSP 1 Score: 114.0 bits (284), Expect = 8.7e-26
Identity = 64/107 (59.81%), Postives = 79/107 (73.83%), Query Frame = 0


Query: 21  PESPVLRSTRLSYQCKRWTAGRISVVGPVAAAPDRISEKVVESIKNAEETCSDDPESGEC 80
           P + VL   RL+Y  K  +  R+ VV   A +   ISEKV +SI+ A+ETC+DDP SGEC
Sbjct: 20  PVARVLGPVRLNYPWKFGSMKRMVVV--KATSEGEISEKVEKSIQEAKETCADDPVSGEC 79

Query: 81  AAAWDEVEELSAAASHARDRLK--DADPLEEFCKDNPETEECRTYED 126
            AAWDEVEELSAAASHARD+ K   +DPLEE+C DNPET+ECRTY++
Sbjct: 80  VAAWDEVEELSAAASHARDKKKAGGSDPLEEYCNDNPETDECRTYDN 124

[Close]

BLAST of Carg13382 vs. TAIR 10
Match: AT3G62410.1 (CP12 domain-containing protein 2 )

HSP 1 Score: 109.4 bits (272), Expect = 2.1e-24
Identity = 58/90 (64.44%), Postives = 71/90 (78.89%), Query Frame = 0


Query: 39  TAGRISVVGPVAAAPD-RISEKVVESIKNAEETCSDDPESGECAAAWDEVEELSAAASHA 98
           T  R+  + P+ AAP+  IS+ V +SIK A+ETC+ DP SGEC AAWDEVEELSAAASHA
Sbjct: 42  TTNRMMKLQPIKAAPEGGISDVVEKSIKEAQETCAGDPVSGECVAAWDEVEELSAAASHA 101

Query: 99  RDRLK--DADPLEEFCKDNPETEECRTYED 126
           RD+ K   +DPLEE+CKDNPET ECRTY++
Sbjct: 102 RDKKKADGSDPLEEYCKDNPETNECRTYDN 131

[Close]

BLAST of Carg13382 vs. TAIR 10
Match: AT1G76560.1 (CP12 domain-containing protein 3 )

HSP 1 Score: 75.5 bits (184), Expect = 3.4e-14
Identity = 38/74 (51.35%), Postives = 51/74 (68.92%), Query Frame = 0


Query: 54  DRISEKVVESIKNAEETCSDDPESGECAAAWDEVEELSAAASHARDRLK--DADPLEEFC 113
           +++SE + E +K A E C  +  S EC  AWDEVEE+S A +  R +LK  + DPLE FC
Sbjct: 61  EKLSEMIEEKVKEATEVCEAEEMSEECRVAWDEVEEVSQARADLRIKLKLLNQDPLESFC 120

Query: 114 KDNPETEECRTYED 126
           ++NPET+ECR YED
Sbjct: 121 QENPETDECRIYED 134

The following BLAST results are available for this feature:

BLAST of Carg13382 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7025592.1	1.0e-60	100.00	Calvin cycle protein CP12-1, chloroplastic, partial [Cucurbita argyrosperma subs...	[more]
KAG6593241.1	5.1e-60	99.20	Calvin cycle protein CP12-1, chloroplastic, partial [Cucurbita argyrosperma subs...	[more]
XP_023514969.1	4.4e-56	94.40	calvin cycle protein CP12-1, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]
XP_023004695.1	4.4e-56	93.60	calvin cycle protein CP12-1, chloroplastic-like [Cucurbita maxima]	[more]
XP_022960418.1	1.4e-54	99.12	calvin cycle protein CP12-1, chloroplastic-like [Cucurbita moschata]	[more]

BLAST of Carg13382 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22914	1.2e-24	59.81	Calvin cycle protein CP12-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP...	[more]
Q9LZP9	3.0e-23	64.44	Calvin cycle protein CP12-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP...	[more]
Q9C9K2	4.8e-13	51.35	Calvin cycle protein CP12-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP...	[more]
A6Q0K5	3.1e-12	43.27	Calvin cycle protein CP12, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN...	[more]

BLAST of Carg13382 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KVB2	2.1e-56	93.60	calvin cycle protein CP12-1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1H8V6	6.9e-55	99.12	calvin cycle protein CP12-1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1JWF5	3.1e-47	81.60	calvin cycle protein CP12-1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A5A7TUE8	5.9e-46	85.34	Calvin cycle protein CP12-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A6J1GQL5	5.9e-46	80.80	calvin cycle protein CP12-1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of Carg13382 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G47400.1	8.7e-26	59.81	CP12 domain-containing protein 1	[more]
AT3G62410.1	2.1e-24	64.44	CP12 domain-containing protein 2	[more]
AT1G76560.1	3.4e-14	51.35	CP12 domain-containing protein 3	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003823	Domain of unknown function CP12	SMART	SM01093	CP12_2	coord: 56..125 e-value: 4.1E-27 score: 106.1
IPR003823	Domain of unknown function CP12	PFAM	PF02672	CP12	coord: 56..124 e-value: 4.0E-26 score: 91.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	PANTHER	PTHR33921:SF15	CALVIN CYCLE PROTEIN CP12-2, CHLOROPLASTIC	coord: 1..125
IPR039314	Calvin cycle protein CP12-like	PANTHER	PTHR33921	CALVIN CYCLE PROTEIN CP12-2, CHLOROPLASTIC	coord: 1..125

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg13382-RA	Carg13382-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004674	protein serine/threonine kinase activity