Homology
BLAST of Carg13361 vs. NCBI nr
Match:
KAG7027479.1 (Protein RRP6-like 2, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 855.1 bits (2208), Expect = 2.5e-244
Identity = 427/427 (100.00%), Postives = 427/427 (100.00%), Query Frame = 0
Query: 1 SSLSPFSNSEVYATPRRSSLQLFSGTLTVDTSTGIALTSGEAYLSYKMDVDQSDSQKAQT 60
SSLSPFSNSEVYATPRRSSLQLFSGTLTVDTSTGIALTSGEAYLSYKMDVDQSDSQKAQT
Sbjct: 1 SSLSPFSNSEVYATPRRSSLQLFSGTLTVDTSTGIALTSGEAYLSYKMDVDQSDSQKAQT 60
Query: 61 LQSLTSGSLGSSLSKLAGSSRGIPAEKDFHFYYSFDEFKIPIQSIERQSQSMLETIGSSA 120
LQSLTSGSLGSSLSKLAGSSRGIPAEKDFHFYYSFDEFKIPIQSIERQSQSMLETIGSSA
Sbjct: 61 LQSLTSGSLGSSLSKLAGSSRGIPAEKDFHFYYSFDEFKIPIQSIERQSQSMLETIGSSA 120
Query: 121 EVWGKEMAFPEDTDDAYDWLVNVNDEIFERFDVSLDEFQRIRKEEEESGRAVALMADSND 180
EVWGKEMAFPEDTDDAYDWLVNVNDEIFERFDVSLDEFQRIRKEEEESGRAVALMADSND
Sbjct: 121 EVWGKEMAFPEDTDDAYDWLVNVNDEIFERFDVSLDEFQRIRKEEEESGRAVALMADSND 180
Query: 181 GFQLVCGKKKKTPSHGDEVHDSSFESSVKVATKDRKTLGVKPKVPFHIPTIRRPQDEFNI 240
GFQLVCGKKKKTPSHGDEVHDSSFESSVKVATKDRKTLGVKPKVPFHIPTIRRPQDEFNI
Sbjct: 181 GFQLVCGKKKKTPSHGDEVHDSSFESSVKVATKDRKTLGVKPKVPFHIPTIRRPQDEFNI 240
Query: 241 LVNNSNQPFEHVWLERSEDGSRFAHPLEKLSVLDFVDKINADFQPVYPPSLDCTPFKFIE 300
LVNNSNQPFEHVWLERSEDGSRFAHPLEKLSVLDFVDKINADFQPVYPPSLDCTPFKFIE
Sbjct: 241 LVNNSNQPFEHVWLERSEDGSRFAHPLEKLSVLDFVDKINADFQPVYPPSLDCTPFKFIE 300
Query: 301 EVNDLKELAAKLQGVNEFAVDLEHNQYRSFQGLTCLMQISTRTEDFVVDTLKLRIHVGPY 360
EVNDLKELAAKLQGVNEFAVDLEHNQYRSFQGLTCLMQISTRTEDFVVDTLKLRIHVGPY
Sbjct: 301 EVNDLKELAAKLQGVNEFAVDLEHNQYRSFQGLTCLMQISTRTEDFVVDTLKLRIHVGPY 360
Query: 361 LREVFKDPSKKKVLHGADRDIVWLQRDFGIYICNLFDTGQASRVLKLERNSLEYLLHHFC 420
LREVFKDPSKKKVLHGADRDIVWLQRDFGIYICNLFDTGQASRVLKLERNSLEYLLHHFC
Sbjct: 361 LREVFKDPSKKKVLHGADRDIVWLQRDFGIYICNLFDTGQASRVLKLERNSLEYLLHHFC 420
Query: 421 GVAANKE 428
GVAANKE
Sbjct: 421 GVAANKE 427
BLAST of Carg13361 vs. NCBI nr
Match:
XP_023517628.1 (protein RRP6-like 2 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 847.8 bits (2189), Expect = 4.0e-242
Identity = 422/424 (99.53%), Postives = 423/424 (99.76%), Query Frame = 0
Query: 4 SPFSNSEVYATPRRSSLQLFSGTLTVDTSTGIALTSGEAYLSYKMDVDQSDSQKAQTLQS 63
+P SNSEVYATPRRSSLQLFSGTLTVDTSTGIALTSGEAYLSYKMDVDQSDSQKAQTLQS
Sbjct: 3 NPLSNSEVYATPRRSSLQLFSGTLTVDTSTGIALTSGEAYLSYKMDVDQSDSQKAQTLQS 62
Query: 64 LTSGSLGSSLSKLAGSSRGIPAEKDFHFYYSFDEFKIPIQSIERQSQSMLETIGSSAEVW 123
LTSGSLGSSLSKLAGSSRGIPAEKDFHFYYSFDEFKIPIQSIERQSQSMLETIGSSAEVW
Sbjct: 63 LTSGSLGSSLSKLAGSSRGIPAEKDFHFYYSFDEFKIPIQSIERQSQSMLETIGSSAEVW 122
Query: 124 GKEMAFPEDTDDAYDWLVNVNDEIFERFDVSLDEFQRIRKEEEESGRAVALMADSNDGFQ 183
GKEMAFPEDTDDAYDWLVNVNDEIFERFDVSLDEFQRIRKEEEESGRAVALMADSNDGFQ
Sbjct: 123 GKEMAFPEDTDDAYDWLVNVNDEIFERFDVSLDEFQRIRKEEEESGRAVALMADSNDGFQ 182
Query: 184 LVCGKKKKTPSHGDEVHDSSFESSVKVATKDRKTLGVKPKVPFHIPTIRRPQDEFNILVN 243
LVCGKKKKTPSHGDEVHDSSFESSVKVATKDRKTLGVKPKVPFHIPTIRRPQDEFNILVN
Sbjct: 183 LVCGKKKKTPSHGDEVHDSSFESSVKVATKDRKTLGVKPKVPFHIPTIRRPQDEFNILVN 242
Query: 244 NSNQPFEHVWLERSEDGSRFAHPLEKLSVLDFVDKINADFQPVYPPSLDCTPFKFIEEVN 303
NSNQPFEHVWLERSEDGSRFAHPLEKLSVLDFVDKINADFQPVYPPSLDCTPFKFIEEVN
Sbjct: 243 NSNQPFEHVWLERSEDGSRFAHPLEKLSVLDFVDKINADFQPVYPPSLDCTPFKFIEEVN 302
Query: 304 DLKELAAKLQGVNEFAVDLEHNQYRSFQGLTCLMQISTRTEDFVVDTLKLRIHVGPYLRE 363
DLKELAAKLQGVNEFAVDLEHNQYRSFQGLTCLMQISTRTEDFVVDTLKLRIHVGPYLRE
Sbjct: 303 DLKELAAKLQGVNEFAVDLEHNQYRSFQGLTCLMQISTRTEDFVVDTLKLRIHVGPYLRE 362
Query: 364 VFKDPSKKKVLHGADRDIVWLQRDFGIYICNLFDTGQASRVLKLERNSLEYLLHHFCGVA 423
VFKDPSKKKVLHGADRDIVWLQRDFGIYICNLFDTGQASRVLKLERNSLEYLLHHFCGVA
Sbjct: 363 VFKDPSKKKVLHGADRDIVWLQRDFGIYICNLFDTGQASRVLKLERNSLEYLLHHFCGVA 422
Query: 424 ANKE 428
ANKE
Sbjct: 423 ANKE 426
BLAST of Carg13361 vs. NCBI nr
Match:
KAG6595480.1 (Protein RRP6-like 2, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 768.5 bits (1983), Expect = 3.1e-218
Identity = 379/380 (99.74%), Postives = 380/380 (100.00%), Query Frame = 0
Query: 48 MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSRGIPAEKDFHFYYSFDEFKIPIQSIER 107
MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSRGIPAEKDFHFYYSFDEFKIPIQSIER
Sbjct: 1 MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSRGIPAEKDFHFYYSFDEFKIPIQSIER 60
Query: 108 QSQSMLETIGSSAEVWGKEMAFPEDTDDAYDWLVNVNDEIFERFDVSLDEFQRIRKEEEE 167
QSQSMLETIGSSAEVWGKEMAFPEDTDDAYDWLVNVNDEIFERFDVSLDEFQRIRKEEEE
Sbjct: 61 QSQSMLETIGSSAEVWGKEMAFPEDTDDAYDWLVNVNDEIFERFDVSLDEFQRIRKEEEE 120
Query: 168 SGRAVALMADSNDGFQLVCGKKKKTPSHGDEVHDSSFESSVKVATKDRKTLGVKPKVPFH 227
SGRAVALMADSNDGFQLVCGKKKKTPSHGDEVHDSSFESSVKVATKDRKTLGVKPKVPFH
Sbjct: 121 SGRAVALMADSNDGFQLVCGKKKKTPSHGDEVHDSSFESSVKVATKDRKTLGVKPKVPFH 180
Query: 228 IPTIRRPQDEFNILVNNSNQPFEHVWLERSEDGSRFAHPLEKLSVLDFVDKINADFQPVY 287
IPTIRRPQDEFNILVNNSNQPFEHVWLERSEDGSRFAHPLEKLSVLDFVDKINADFQPVY
Sbjct: 181 IPTIRRPQDEFNILVNNSNQPFEHVWLERSEDGSRFAHPLEKLSVLDFVDKINADFQPVY 240
Query: 288 PPSLDCTPFKFIEEVNDLKELAAKLQGVNEFAVDLEHNQYRSFQGLTCLMQISTRTEDFV 347
PPSLDCTPFKFIEEVNDLKELAAKLQGVNEF+VDLEHNQYRSFQGLTCLMQISTRTEDFV
Sbjct: 241 PPSLDCTPFKFIEEVNDLKELAAKLQGVNEFSVDLEHNQYRSFQGLTCLMQISTRTEDFV 300
Query: 348 VDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDIVWLQRDFGIYICNLFDTGQASRVLKL 407
VDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDIVWLQRDFGIYICNLFDTGQASRVLKL
Sbjct: 301 VDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDIVWLQRDFGIYICNLFDTGQASRVLKL 360
Query: 408 ERNSLEYLLHHFCGVAANKE 428
ERNSLEYLLHHFCGVAANKE
Sbjct: 361 ERNSLEYLLHHFCGVAANKE 380
BLAST of Carg13361 vs. NCBI nr
Match:
XP_022966154.1 (protein RRP6-like 2 [Cucurbita maxima])
HSP 1 Score: 767.3 bits (1980), Expect = 6.9e-218
Identity = 378/380 (99.47%), Postives = 380/380 (100.00%), Query Frame = 0
Query: 48 MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSRGIPAEKDFHFYYSFDEFKIPIQSIER 107
MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSRGIPA+KDFHFYYSFDEFKIPIQSIER
Sbjct: 1 MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSRGIPADKDFHFYYSFDEFKIPIQSIER 60
Query: 108 QSQSMLETIGSSAEVWGKEMAFPEDTDDAYDWLVNVNDEIFERFDVSLDEFQRIRKEEEE 167
QSQSMLETIGSSAEVWGKEMAFPEDTDDAYDWLVNVNDEIFERFD+SLDEFQRIRKEEEE
Sbjct: 61 QSQSMLETIGSSAEVWGKEMAFPEDTDDAYDWLVNVNDEIFERFDLSLDEFQRIRKEEEE 120
Query: 168 SGRAVALMADSNDGFQLVCGKKKKTPSHGDEVHDSSFESSVKVATKDRKTLGVKPKVPFH 227
SGRAVALMADSNDGFQLVCGKKKKTPSHGDEVHDSSFESSVKVATKDRKTLGVKPKVPFH
Sbjct: 121 SGRAVALMADSNDGFQLVCGKKKKTPSHGDEVHDSSFESSVKVATKDRKTLGVKPKVPFH 180
Query: 228 IPTIRRPQDEFNILVNNSNQPFEHVWLERSEDGSRFAHPLEKLSVLDFVDKINADFQPVY 287
IPTIRRPQDEFNILVNNSNQPFEHVWLERSEDGSRFAHPLEKLSVLDFVDKINADFQPVY
Sbjct: 181 IPTIRRPQDEFNILVNNSNQPFEHVWLERSEDGSRFAHPLEKLSVLDFVDKINADFQPVY 240
Query: 288 PPSLDCTPFKFIEEVNDLKELAAKLQGVNEFAVDLEHNQYRSFQGLTCLMQISTRTEDFV 347
PPSLDCTPFKFIEEVNDLKELAAKLQGVNEFAVDLEHNQYRSFQGLTCLMQISTRTEDFV
Sbjct: 241 PPSLDCTPFKFIEEVNDLKELAAKLQGVNEFAVDLEHNQYRSFQGLTCLMQISTRTEDFV 300
Query: 348 VDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDIVWLQRDFGIYICNLFDTGQASRVLKL 407
VDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDIVWLQRDFGIYICNLFDTGQASRVLKL
Sbjct: 301 VDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDIVWLQRDFGIYICNLFDTGQASRVLKL 360
Query: 408 ERNSLEYLLHHFCGVAANKE 428
ERNSLEYLLHHFCGVAANKE
Sbjct: 361 ERNSLEYLLHHFCGVAANKE 380
BLAST of Carg13361 vs. NCBI nr
Match:
XP_022925220.1 (protein RRP6-like 2 [Cucurbita moschata])
HSP 1 Score: 765.4 bits (1975), Expect = 2.6e-217
Identity = 377/380 (99.21%), Postives = 379/380 (99.74%), Query Frame = 0
Query: 48 MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSRGIPAEKDFHFYYSFDEFKIPIQSIER 107
MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSRGIPA+KDFHFYYSFDEFKIPIQSIER
Sbjct: 1 MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSRGIPADKDFHFYYSFDEFKIPIQSIER 60
Query: 108 QSQSMLETIGSSAEVWGKEMAFPEDTDDAYDWLVNVNDEIFERFDVSLDEFQRIRKEEEE 167
QSQSMLETIGSSAEVWGKEMAFPEDTDDAYDWLVNVNDEIFERFD+SLDEFQRIRKEEEE
Sbjct: 61 QSQSMLETIGSSAEVWGKEMAFPEDTDDAYDWLVNVNDEIFERFDMSLDEFQRIRKEEEE 120
Query: 168 SGRAVALMADSNDGFQLVCGKKKKTPSHGDEVHDSSFESSVKVATKDRKTLGVKPKVPFH 227
SGRAVALMADSNDGFQLVCGKKKKTPSHGDEVHDSSFESSVKVATKDRKTLGVKPKVPFH
Sbjct: 121 SGRAVALMADSNDGFQLVCGKKKKTPSHGDEVHDSSFESSVKVATKDRKTLGVKPKVPFH 180
Query: 228 IPTIRRPQDEFNILVNNSNQPFEHVWLERSEDGSRFAHPLEKLSVLDFVDKINADFQPVY 287
IPTIRRPQDEFNILVNNSNQPFEHVWLERSEDGSRFAHPLEKL VLDFVDKINADFQPVY
Sbjct: 181 IPTIRRPQDEFNILVNNSNQPFEHVWLERSEDGSRFAHPLEKLPVLDFVDKINADFQPVY 240
Query: 288 PPSLDCTPFKFIEEVNDLKELAAKLQGVNEFAVDLEHNQYRSFQGLTCLMQISTRTEDFV 347
PPSLDCTPFKFIEEVNDLKELAAKLQGVNEFAVDLEHNQYRSFQGLTCLMQISTRTEDFV
Sbjct: 241 PPSLDCTPFKFIEEVNDLKELAAKLQGVNEFAVDLEHNQYRSFQGLTCLMQISTRTEDFV 300
Query: 348 VDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDIVWLQRDFGIYICNLFDTGQASRVLKL 407
VDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDIVWLQRDFGIYICNLFDTGQASRVLKL
Sbjct: 301 VDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDIVWLQRDFGIYICNLFDTGQASRVLKL 360
Query: 408 ERNSLEYLLHHFCGVAANKE 428
ERNSLEYLLHHFCGVAANKE
Sbjct: 361 ERNSLEYLLHHFCGVAANKE 380
BLAST of Carg13361 vs. ExPASy Swiss-Prot
Match:
A9LLI7 (Protein RRP6-like 2 OS=Arabidopsis thaliana OX=3702 GN=RRP6L2 PE=2 SV=1)
HSP 1 Score: 513.8 bits (1322), Expect = 1.8e-144
Identity = 260/388 (67.01%), Postives = 304/388 (78.35%), Query Frame = 0
Query: 48 MDVDQSD-SQKAQTLQSLTSG-SLGSSLSKLAGSSRGIPAEKDFHFYYSFDEFKIPIQSI 107
MDVD+S S K ++L+ L G S S+LS+L+ SSR IP +DFHFYY+FDEFK PI I
Sbjct: 6 MDVDESPVSWKVKSLEKLIDGSSFSSTLSRLSSSSRLIPTSRDFHFYYNFDEFKRPIDEI 65
Query: 108 ERQSQSMLETIGSSAEVWGKEMAFPEDTDDAY--DWLVNVNDEIFERFDVSLDEFQRIRK 167
SQS L TIG S +VWGK M FP D DD Y DWL NVNDE+ ERFDVS+DEFQRIRK
Sbjct: 66 TGTSQSTLATIGDSEQVWGKSMKFPGDVDDVYAEDWLCNVNDELIERFDVSVDEFQRIRK 125
Query: 168 EEEESGRAVALMADSNDGFQLVCGKKKKTPSH----GDEVHDSSFESSVKVATKDRKTLG 227
+E+E GR+V + D +DGFQ+V GKKKK + V+ VK+A +D+ + G
Sbjct: 126 KEKEIGRSV-VADDGDDGFQMVYGKKKKPVGNVVTGSAAVNGGGSVIDVKMAERDKNSSG 185
Query: 228 VKPKVPFHIPTIRRPQDEFNILVNNSNQPFEHVWLERSEDGSRFAHPLEKLSVLDFVDKI 287
K KVPFH+PTI++PQ+E+NILVNN+N PFEHVWLERSED R HPLEK SVLDFVDK
Sbjct: 186 -KAKVPFHVPTIKKPQEEYNILVNNANLPFEHVWLERSEDDLRAMHPLEKFSVLDFVDKD 245
Query: 288 NADFQPVYPPSLDCTPFKFIEEVNDLKELAAKLQGVNEFAVDLEHNQYRSFQGLTCLMQI 347
+ +PV P L+ TPFKF++EV DLKEL AKL+ V EFAVDLEHNQYRSFQGLTCLMQI
Sbjct: 246 VNEMEPVKPLPLEQTPFKFVQEVKDLKELVAKLRSVEEFAVDLEHNQYRSFQGLTCLMQI 305
Query: 348 STRTEDFVVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDIVWLQRDFGIYICNLFDTG 407
STRTED++VDT KLRIH+GPYLRE+FKDP KKKV+HGADRDI+WLQRDFGIY+CNLFDTG
Sbjct: 306 STRTEDYIVDTFKLRIHIGPYLREIFKDPKKKKVMHGADRDIIWLQRDFGIYVCNLFDTG 365
Query: 408 QASRVLKLERNSLEYLLHHFCGVAANKE 428
QASRVL LERNSLE+LL HFCGV ANKE
Sbjct: 366 QASRVLNLERNSLEFLLQHFCGVTANKE 391
BLAST of Carg13361 vs. ExPASy Swiss-Prot
Match:
Q0WVE8 (Protein RRP6-like 1 OS=Arabidopsis thaliana OX=3702 GN=RRP6L1 PE=2 SV=1)
HSP 1 Score: 344.4 bits (882), Expect = 1.9e-93
Identity = 171/279 (61.29%), Postives = 205/279 (73.48%), Query Frame = 0
Query: 150 RFDVSLDEFQRIRKEEEESGRAVALMADSNDGFQLVCGKKKKTPSHGDEVHDSSFESSVK 209
RFD +DEF+R RK EE+S + + VK
Sbjct: 2 RFDDPMDEFKRNRKMEEDSKKVI----------------------------------DVK 61
Query: 210 VATKDRKTLGV-KPKVPFHIPTIRRPQDEFNILVNNSNQPFEHVWLERSEDGSRFAHPLE 269
VA D+ K +VPFHIPT+ +PQ+E+ ILV+N+N PFEHV LE+SEDG RF HPLE
Sbjct: 62 VAESDKGFAKFGKAEVPFHIPTLTKPQEEYKILVDNANNPFEHVLLEKSEDGLRFIHPLE 121
Query: 270 KLSVLDFVDKINADFQPVYPPSLDCTPFKFIEEVNDLKELAAKLQGVNEFAVDLEHNQYR 329
+LSV+DFVD+ ++ +PV P L+ TPFK +EEV DL++LAA LQ V EFAVDLEHNQYR
Sbjct: 122 ELSVMDFVDRNLSEMRPVKPLPLEETPFKLVEEVKDLEDLAAALQSVEEFAVDLEHNQYR 181
Query: 330 SFQGLTCLMQISTRTEDFVVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDIVWLQRDF 389
+FQGLTCLMQISTRTED++VD KL H+GPYLRE+FKDP KKKV+HGADRDI+WLQRDF
Sbjct: 182 TFQGLTCLMQISTRTEDYIVDIFKLWDHIGPYLRELFKDPKKKKVIHGADRDIIWLQRDF 241
Query: 390 GIYICNLFDTGQASRVLKLERNSLEYLLHHFCGVAANKE 428
GIY+CNLFDTGQASRVLKLERNSLE+LL H+CGVAANKE
Sbjct: 242 GIYVCNLFDTGQASRVLKLERNSLEFLLKHYCGVAANKE 246
BLAST of Carg13361 vs. ExPASy Swiss-Prot
Match:
Q01780 (Exosome component 10 OS=Homo sapiens OX=9606 GN=EXOSC10 PE=1 SV=2)
HSP 1 Score: 187.6 bits (475), Expect = 3.0e-46
Identity = 136/395 (34.43%), Postives = 201/395 (50.89%), Query Frame = 0
Query: 63 SLTSGSLGSSLSKLAGSSRGIPAEKD-FHFYYSFDEFKIPIQSIERQSQSMLETIGSSAE 122
S +LGS ++ + +S G+P D + FY SF F+ E Q +L+ + +
Sbjct: 34 SFVKFALGSVVA-VTKASGGLPQFGDEYDFYRSFPGFQ---AFCETQGDRLLQCMSRVMQ 93
Query: 123 VWG-----KEMAFPEDTDDAYDWLVNVNDEIFERFDVSLDEFQRIRKEEEESGRAVALMA 182
G K+ + + +D +D LV+ ND I ER + LDE + K ++ L A
Sbjct: 94 YHGCRSNIKDRSKVTELEDKFDLLVDANDVILERVGILLDEASGVNKNQQP-----VLPA 153
Query: 183 DSNDGFQLVCGKKKKTPSHGDEVHDSSF-----ESSVKVATKDRKTLG-----------V 242
+V +K +G + +F ++ ++ K R+ + +
Sbjct: 154 GLQVPKTVVSSWNRKAAEYGKKAKSETFRLLHAKNIIRPQLKFREKIDNSNTPFLPKIFI 213
Query: 243 KPKVPFHIPTI------RRPQDEFNIL-VNNSNQPFEHVWLERSEDGSRFAHPLE-KLSV 302
KP +P RPQD L V + F H + + FAHP + +L+
Sbjct: 214 KPNAQKPLPQALSKERRERPQDRPEDLDVPPALADFIHQQRTQQVEQDMFAHPYQYELNH 273
Query: 303 LDFVDKINADFQPVYPPSLDCTPFKFIEEVNDLKELAAKLQGVNEFAVDLEHNQYRSFQG 362
D + QP ++ TP FI +++L EL KL EFAVDLEH+ YRSF G
Sbjct: 274 FTPADAVLQKPQPQLYRPIEETPCHFISSLDELVELNEKLLNCQEFAVDLEHHSYRSFLG 333
Query: 363 LTCLMQISTRTEDFVVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDIVWLQRDFGIYI 422
LTCLMQISTRTEDF++DTL+LR + L E DP+ KV HGAD DI WLQ+DFG+Y+
Sbjct: 334 LTCLMQISTRTEDFIIDTLELRSDM-YILNESLTDPAIVKVFHGADSDIEWLQKDFGLYV 393
Query: 423 CNLFDTGQASRVLKLERNSLEYLLHHFCGVAANKE 428
N+FDT QA+R+L L R+SL++LL +C V +NK+
Sbjct: 394 VNMFDTHQAARLLNLGRHSLDHLLKLYCNVDSNKQ 418
BLAST of Carg13361 vs. ExPASy Swiss-Prot
Match:
P56960 (Exosome component 10 OS=Mus musculus OX=10090 GN=Exosc10 PE=1 SV=2)
HSP 1 Score: 184.1 bits (466), Expect = 3.3e-45
Identity = 136/395 (34.43%), Postives = 200/395 (50.63%), Query Frame = 0
Query: 63 SLTSGSLGSSLSKLAGSSRGIPAEKD-FHFYYSFDEFKIPIQSIERQSQSMLETIGSSAE 122
S +LGS ++ + +S G+P D + FY SF F+ E Q +L+ + +
Sbjct: 34 SFVKFALGSVVA-VTKASGGLPQFGDEYDFYRSFPAFQ---AFCETQGDRLLQCMSRVMQ 93
Query: 123 VWG-----KEMAFPEDTDDAYDWLVNVNDEIFERFDVSLDEFQRIRKEEEESGRAVALMA 182
G K+ + + +D +D LV+ ND I ER + LDE + K ++ L A
Sbjct: 94 YHGCRSNIKDRSKVTELEDKFDLLVDTNDVILERVGMLLDEASGVNKHQQP-----VLPA 153
Query: 183 DSNDGFQLVCGKKKKTPSHGDEVHDSSF-----ESSVKVATKDRKTLG-----------V 242
+V +K +G + +F ++ V+ + R+ + V
Sbjct: 154 GLQVPKTIVSSWNRKAGEYGKKAKSETFRLLHAKNIVRPQLRFREKIDNSNTPFLPKIFV 213
Query: 243 KPKVPFHIPTI------RRPQDEFNIL-VNNSNQPFEHVWLERSEDGSRFAHPLE-KLSV 302
KP +P RPQD L V + F H + + FAHP + +L
Sbjct: 214 KPNARKPLPLALSKERRERPQDRPEDLDVPPALADFIHQQRTQQVEQDMFAHPYQYELDH 273
Query: 303 LDFVDKINADFQPVYPPSLDCTPFKFIEEVNDLKELAAKLQGVNEFAVDLEHNQYRSFQG 362
+ +P ++ TP + +++L EL KL G EFAVDLEH+ YRSF G
Sbjct: 274 FTPPQSVLQRPKPQLYRAVGETPCHLVSSLDELVELNEKLLGCQEFAVDLEHHSYRSFLG 333
Query: 363 LTCLMQISTRTEDFVVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDIVWLQRDFGIYI 422
LTCLMQISTRTEDF+VDTL+LR + L E DP+ KV HGAD DI WLQ+DFG+Y+
Sbjct: 334 LTCLMQISTRTEDFIVDTLELRSDM-YILNESLTDPAIVKVFHGADSDIEWLQKDFGLYV 393
Query: 423 CNLFDTGQASRVLKLERNSLEYLLHHFCGVAANKE 428
N+FDT QA+R+L L R+SL++LL +CGV +NK+
Sbjct: 394 VNMFDTHQAARLLNLARHSLDHLLRLYCGVESNKQ 418
BLAST of Carg13361 vs. ExPASy Swiss-Prot
Match:
Q10146 (Exosome complex exonuclease rrp6 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rrp6 PE=3 SV=2)
HSP 1 Score: 159.8 bits (403), Expect = 6.6e-38
Identity = 119/369 (32.25%), Postives = 180/369 (48.78%), Query Frame = 0
Query: 85 AEKDFHFYYSFD-EFKIPIQSIERQSQSMLETIGSSAE-VWGKEMAFPEDTDDAYDWLVN 144
A+ D FY S D EF I+S+ + ++E + S + +++ ED D+ + + +
Sbjct: 21 AKVDIPFYKSIDTEFNENIKSVSSRFMRLIELLLSKVDRSRAEDIVDVEDIDNRWAEVSD 80
Query: 145 VNDEIFERFDVSLDEFQRIRKEEEESGRAVALMADSNDGFQLVCGKKKKTPSHGDEVHDS 204
D +FE+ D S+D+ Q + K+ A+ A ++D V KK K
Sbjct: 81 TLDILFEKADYSIDKAQGLLKKP-----AIETHASTSD----VANKKPK----------- 140
Query: 205 SFESSVKVATKDRKTLGVKPKVPF---HIPTIRRPQDEFNILVNNSNQPFEHVWLERSED 264
K K+P+ H + +PQ F + NNS E VW + +
Sbjct: 141 ------------------KEKLPYKVIHAAHLTKPQLRFRVQPNNSR---EFVWSWKLTE 200
Query: 265 GSRFAHPLEKLSVLDFVD-----KINADFQP-----VYPP------------SLDCTPFK 324
PLEK+ +D + ++P VYPP S+D T
Sbjct: 201 KPHSLVPLEKIIAQVKLDPSLKNSLPHPYEPEIQNSVYPPWVSEMSNPIDTGSVDETEPI 260
Query: 325 FIEEVNDLKELAAKLQGVNEFAVDLEHNQYRSFQGLTCLMQISTRTEDFVVDTLKLRIHV 384
++ + L ++ +LQ E AVDLEH+ YRSF+G CLMQIS R +D++VDTL+LR +
Sbjct: 261 WVSTESQLSDMLKELQNSKEIAVDLEHHDYRSFRGFVCLMQISNREKDWIVDTLELREEL 320
Query: 385 GPYLREVFKDPSKKKVLHGADRDIVWLQRDFGIYICNLFDTGQASRVLKLERNSLEYLLH 427
L VF +P+ KV HGA DI+WLQRDFG+Y+ NLFDT A++VL E + L +LL
Sbjct: 321 -EALNVVFTNPNIIKVFHGATMDIIWLQRDFGLYVVNLFDTYYATKVLGFEGHGLAFLLQ 347
BLAST of Carg13361 vs. ExPASy TrEMBL
Match:
A0A6J1HSV6 (protein RRP6-like 2 OS=Cucurbita maxima OX=3661 GN=LOC111465918 PE=4 SV=1)
HSP 1 Score: 767.3 bits (1980), Expect = 3.4e-218
Identity = 378/380 (99.47%), Postives = 380/380 (100.00%), Query Frame = 0
Query: 48 MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSRGIPAEKDFHFYYSFDEFKIPIQSIER 107
MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSRGIPA+KDFHFYYSFDEFKIPIQSIER
Sbjct: 1 MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSRGIPADKDFHFYYSFDEFKIPIQSIER 60
Query: 108 QSQSMLETIGSSAEVWGKEMAFPEDTDDAYDWLVNVNDEIFERFDVSLDEFQRIRKEEEE 167
QSQSMLETIGSSAEVWGKEMAFPEDTDDAYDWLVNVNDEIFERFD+SLDEFQRIRKEEEE
Sbjct: 61 QSQSMLETIGSSAEVWGKEMAFPEDTDDAYDWLVNVNDEIFERFDLSLDEFQRIRKEEEE 120
Query: 168 SGRAVALMADSNDGFQLVCGKKKKTPSHGDEVHDSSFESSVKVATKDRKTLGVKPKVPFH 227
SGRAVALMADSNDGFQLVCGKKKKTPSHGDEVHDSSFESSVKVATKDRKTLGVKPKVPFH
Sbjct: 121 SGRAVALMADSNDGFQLVCGKKKKTPSHGDEVHDSSFESSVKVATKDRKTLGVKPKVPFH 180
Query: 228 IPTIRRPQDEFNILVNNSNQPFEHVWLERSEDGSRFAHPLEKLSVLDFVDKINADFQPVY 287
IPTIRRPQDEFNILVNNSNQPFEHVWLERSEDGSRFAHPLEKLSVLDFVDKINADFQPVY
Sbjct: 181 IPTIRRPQDEFNILVNNSNQPFEHVWLERSEDGSRFAHPLEKLSVLDFVDKINADFQPVY 240
Query: 288 PPSLDCTPFKFIEEVNDLKELAAKLQGVNEFAVDLEHNQYRSFQGLTCLMQISTRTEDFV 347
PPSLDCTPFKFIEEVNDLKELAAKLQGVNEFAVDLEHNQYRSFQGLTCLMQISTRTEDFV
Sbjct: 241 PPSLDCTPFKFIEEVNDLKELAAKLQGVNEFAVDLEHNQYRSFQGLTCLMQISTRTEDFV 300
Query: 348 VDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDIVWLQRDFGIYICNLFDTGQASRVLKL 407
VDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDIVWLQRDFGIYICNLFDTGQASRVLKL
Sbjct: 301 VDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDIVWLQRDFGIYICNLFDTGQASRVLKL 360
Query: 408 ERNSLEYLLHHFCGVAANKE 428
ERNSLEYLLHHFCGVAANKE
Sbjct: 361 ERNSLEYLLHHFCGVAANKE 380
BLAST of Carg13361 vs. ExPASy TrEMBL
Match:
A0A6J1EHB5 (protein RRP6-like 2 OS=Cucurbita moschata OX=3662 GN=LOC111432526 PE=4 SV=1)
HSP 1 Score: 765.4 bits (1975), Expect = 1.3e-217
Identity = 377/380 (99.21%), Postives = 379/380 (99.74%), Query Frame = 0
Query: 48 MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSRGIPAEKDFHFYYSFDEFKIPIQSIER 107
MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSRGIPA+KDFHFYYSFDEFKIPIQSIER
Sbjct: 1 MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSRGIPADKDFHFYYSFDEFKIPIQSIER 60
Query: 108 QSQSMLETIGSSAEVWGKEMAFPEDTDDAYDWLVNVNDEIFERFDVSLDEFQRIRKEEEE 167
QSQSMLETIGSSAEVWGKEMAFPEDTDDAYDWLVNVNDEIFERFD+SLDEFQRIRKEEEE
Sbjct: 61 QSQSMLETIGSSAEVWGKEMAFPEDTDDAYDWLVNVNDEIFERFDMSLDEFQRIRKEEEE 120
Query: 168 SGRAVALMADSNDGFQLVCGKKKKTPSHGDEVHDSSFESSVKVATKDRKTLGVKPKVPFH 227
SGRAVALMADSNDGFQLVCGKKKKTPSHGDEVHDSSFESSVKVATKDRKTLGVKPKVPFH
Sbjct: 121 SGRAVALMADSNDGFQLVCGKKKKTPSHGDEVHDSSFESSVKVATKDRKTLGVKPKVPFH 180
Query: 228 IPTIRRPQDEFNILVNNSNQPFEHVWLERSEDGSRFAHPLEKLSVLDFVDKINADFQPVY 287
IPTIRRPQDEFNILVNNSNQPFEHVWLERSEDGSRFAHPLEKL VLDFVDKINADFQPVY
Sbjct: 181 IPTIRRPQDEFNILVNNSNQPFEHVWLERSEDGSRFAHPLEKLPVLDFVDKINADFQPVY 240
Query: 288 PPSLDCTPFKFIEEVNDLKELAAKLQGVNEFAVDLEHNQYRSFQGLTCLMQISTRTEDFV 347
PPSLDCTPFKFIEEVNDLKELAAKLQGVNEFAVDLEHNQYRSFQGLTCLMQISTRTEDFV
Sbjct: 241 PPSLDCTPFKFIEEVNDLKELAAKLQGVNEFAVDLEHNQYRSFQGLTCLMQISTRTEDFV 300
Query: 348 VDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDIVWLQRDFGIYICNLFDTGQASRVLKL 407
VDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDIVWLQRDFGIYICNLFDTGQASRVLKL
Sbjct: 301 VDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDIVWLQRDFGIYICNLFDTGQASRVLKL 360
Query: 408 ERNSLEYLLHHFCGVAANKE 428
ERNSLEYLLHHFCGVAANKE
Sbjct: 361 ERNSLEYLLHHFCGVAANKE 380
BLAST of Carg13361 vs. ExPASy TrEMBL
Match:
A0A0A0KYK9 (HRDC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G188930 PE=4 SV=1)
HSP 1 Score: 729.2 bits (1881), Expect = 1.0e-206
Identity = 357/381 (93.70%), Postives = 372/381 (97.64%), Query Frame = 0
Query: 48 MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSRGIPAEKDFHFYYSFDEFKIPIQSIER 107
MDVDQSDSQKAQTLQSLT+GSLGSSLSKLA SSR IPAEKDFHFYY+FDEFKIPI++IER
Sbjct: 1 MDVDQSDSQKAQTLQSLTTGSLGSSLSKLAASSRAIPAEKDFHFYYNFDEFKIPIRTIER 60
Query: 108 QSQSMLETIGSSAEVWGKEMAFPEDTDDAYDWLVNVNDEIFERFDVSLDEFQRIRK-EEE 167
QSQSMLETIGSSAEVWGKEMAFPEDTDDAYDWLVNVNDEIFERFDVSLDEFQ+IRK EEE
Sbjct: 61 QSQSMLETIGSSAEVWGKEMAFPEDTDDAYDWLVNVNDEIFERFDVSLDEFQKIRKEEEE 120
Query: 168 ESGRAVALMADSNDGFQLVCGKKKKTPSHGDEVHDSSFESSVKVATKDRKTLGVKPKVPF 227
ESGRA+AL AD +DGFQLVCGKKKKTP+H DE+HDSSFESSVKVATKDRKTLGVKPKVPF
Sbjct: 121 ESGRALALTADPDDGFQLVCGKKKKTPTHEDEMHDSSFESSVKVATKDRKTLGVKPKVPF 180
Query: 228 HIPTIRRPQDEFNILVNNSNQPFEHVWLERSEDGSRFAHPLEKLSVLDFVDKINADFQPV 287
HIPTIRRPQDEFNILVNNSNQPFEHVWL+RSEDG RF HPLEKLSVLDFVDKI+ DFQP+
Sbjct: 181 HIPTIRRPQDEFNILVNNSNQPFEHVWLQRSEDGIRFVHPLEKLSVLDFVDKISEDFQPI 240
Query: 288 YPPSLDCTPFKFIEEVNDLKELAAKLQGVNEFAVDLEHNQYRSFQGLTCLMQISTRTEDF 347
YPPSLDCTPFKFIEEVNDLKELAAKL+GVNEFAVDLEHNQYRSFQGLTCLMQISTRTED+
Sbjct: 241 YPPSLDCTPFKFIEEVNDLKELAAKLRGVNEFAVDLEHNQYRSFQGLTCLMQISTRTEDY 300
Query: 348 VVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDIVWLQRDFGIYICNLFDTGQASRVLK 407
VVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRD+VWLQRDFGIYICNLFDTGQASRVLK
Sbjct: 301 VVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDVVWLQRDFGIYICNLFDTGQASRVLK 360
Query: 408 LERNSLEYLLHHFCGVAANKE 428
LERNSLEYLLHHFCGVAANKE
Sbjct: 361 LERNSLEYLLHHFCGVAANKE 381
BLAST of Carg13361 vs. ExPASy TrEMBL
Match:
A0A5A7TI59 (Protein RRP6-like 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G00910 PE=4 SV=1)
HSP 1 Score: 724.5 bits (1869), Expect = 2.5e-205
Identity = 354/382 (92.67%), Postives = 371/382 (97.12%), Query Frame = 0
Query: 48 MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSRGIPAEKDFHFYYSFDEFKIPIQSIER 107
MDVDQSDSQKAQTLQSLT+GSLGSSLSKLA SSR IPAEKDFHFYY+FDEFKIPI++IER
Sbjct: 1 MDVDQSDSQKAQTLQSLTTGSLGSSLSKLAASSRAIPAEKDFHFYYNFDEFKIPIRTIER 60
Query: 108 QSQSMLETIGSSAEVWGKEMAFPEDTDDAYDWLVNVNDEIFERFDVSLDEFQRIRKEE-- 167
QSQSMLETIGSSAEVW +EMA+PEDTDDAYDWLVNVNDEIFERFDVSLDEFQ+IRKEE
Sbjct: 61 QSQSMLETIGSSAEVWDREMAYPEDTDDAYDWLVNVNDEIFERFDVSLDEFQKIRKEEEQ 120
Query: 168 EESGRAVALMADSNDGFQLVCGKKKKTPSHGDEVHDSSFESSVKVATKDRKTLGVKPKVP 227
EESGRAVAL AD +DGFQLVCGKKKKTP+H DE+HDSSFESSVKVATKDRKTLGVKPKVP
Sbjct: 121 EESGRAVALTADPDDGFQLVCGKKKKTPTHEDEMHDSSFESSVKVATKDRKTLGVKPKVP 180
Query: 228 FHIPTIRRPQDEFNILVNNSNQPFEHVWLERSEDGSRFAHPLEKLSVLDFVDKINADFQP 287
FHIPTIRRPQDEFNILVNNSNQPFEHVWL+RSEDG+RF HPLEK SVLDFVDKI+ DFQP
Sbjct: 181 FHIPTIRRPQDEFNILVNNSNQPFEHVWLQRSEDGTRFVHPLEKFSVLDFVDKISEDFQP 240
Query: 288 VYPPSLDCTPFKFIEEVNDLKELAAKLQGVNEFAVDLEHNQYRSFQGLTCLMQISTRTED 347
+YPPSLDCTPFKFIEEVNDLKELAAKL+GVNEFAVDLEHNQYRSFQGLTCLMQISTRTED
Sbjct: 241 IYPPSLDCTPFKFIEEVNDLKELAAKLRGVNEFAVDLEHNQYRSFQGLTCLMQISTRTED 300
Query: 348 FVVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDIVWLQRDFGIYICNLFDTGQASRVL 407
+VVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRD+VWLQRDFGIYICNLFDTGQASRVL
Sbjct: 301 YVVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDVVWLQRDFGIYICNLFDTGQASRVL 360
Query: 408 KLERNSLEYLLHHFCGVAANKE 428
KLERNSLEYLLHHFCGVAANKE
Sbjct: 361 KLERNSLEYLLHHFCGVAANKE 382
BLAST of Carg13361 vs. ExPASy TrEMBL
Match:
A0A5D3DTL6 (Protein RRP6-like 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold95G00180 PE=4 SV=1)
HSP 1 Score: 724.5 bits (1869), Expect = 2.5e-205
Identity = 354/382 (92.67%), Postives = 371/382 (97.12%), Query Frame = 0
Query: 48 MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSRGIPAEKDFHFYYSFDEFKIPIQSIER 107
MDVDQSDSQKAQTLQSLT+GSLGSSLSKLA SSR IPAEKDFHFYY+FDEFKIPI++IER
Sbjct: 1 MDVDQSDSQKAQTLQSLTTGSLGSSLSKLAASSRAIPAEKDFHFYYNFDEFKIPIRTIER 60
Query: 108 QSQSMLETIGSSAEVWGKEMAFPEDTDDAYDWLVNVNDEIFERFDVSLDEFQRIRKEE-- 167
QSQSMLETIGSSAEVW +EMA+PEDTDDAYDWLVNVNDEIFERFDVSLDEFQ+IRKEE
Sbjct: 61 QSQSMLETIGSSAEVWDREMAYPEDTDDAYDWLVNVNDEIFERFDVSLDEFQKIRKEEEQ 120
Query: 168 EESGRAVALMADSNDGFQLVCGKKKKTPSHGDEVHDSSFESSVKVATKDRKTLGVKPKVP 227
EESGRAVAL AD +DGFQLVCGKKKKTP+H DE+HDSSFESSVKVATKDRKTLGVKPKVP
Sbjct: 121 EESGRAVALTADPDDGFQLVCGKKKKTPTHEDEMHDSSFESSVKVATKDRKTLGVKPKVP 180
Query: 228 FHIPTIRRPQDEFNILVNNSNQPFEHVWLERSEDGSRFAHPLEKLSVLDFVDKINADFQP 287
FHIPTIRRPQDEFNILVNNSNQPFEHVWL+RSEDG+RF HPLEK SVLDFVDKI+ DFQP
Sbjct: 181 FHIPTIRRPQDEFNILVNNSNQPFEHVWLQRSEDGTRFVHPLEKFSVLDFVDKISEDFQP 240
Query: 288 VYPPSLDCTPFKFIEEVNDLKELAAKLQGVNEFAVDLEHNQYRSFQGLTCLMQISTRTED 347
+YPPSLDCTPFKFIEEVNDLKELAAKL+GVNEFAVDLEHNQYRSFQGLTCLMQISTRTED
Sbjct: 241 IYPPSLDCTPFKFIEEVNDLKELAAKLRGVNEFAVDLEHNQYRSFQGLTCLMQISTRTED 300
Query: 348 FVVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDIVWLQRDFGIYICNLFDTGQASRVL 407
+VVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRD+VWLQRDFGIYICNLFDTGQASRVL
Sbjct: 301 YVVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDVVWLQRDFGIYICNLFDTGQASRVL 360
Query: 408 KLERNSLEYLLHHFCGVAANKE 428
KLERNSLEYLLHHFCGVAANKE
Sbjct: 361 KLERNSLEYLLHHFCGVAANKE 382
BLAST of Carg13361 vs. TAIR 10
Match:
AT5G35910.1 (Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain )
HSP 1 Score: 513.8 bits (1322), Expect = 1.3e-145
Identity = 260/388 (67.01%), Postives = 304/388 (78.35%), Query Frame = 0
Query: 48 MDVDQSD-SQKAQTLQSLTSG-SLGSSLSKLAGSSRGIPAEKDFHFYYSFDEFKIPIQSI 107
MDVD+S S K ++L+ L G S S+LS+L+ SSR IP +DFHFYY+FDEFK PI I
Sbjct: 6 MDVDESPVSWKVKSLEKLIDGSSFSSTLSRLSSSSRLIPTSRDFHFYYNFDEFKRPIDEI 65
Query: 108 ERQSQSMLETIGSSAEVWGKEMAFPEDTDDAY--DWLVNVNDEIFERFDVSLDEFQRIRK 167
SQS L TIG S +VWGK M FP D DD Y DWL NVNDE+ ERFDVS+DEFQRIRK
Sbjct: 66 TGTSQSTLATIGDSEQVWGKSMKFPGDVDDVYAEDWLCNVNDELIERFDVSVDEFQRIRK 125
Query: 168 EEEESGRAVALMADSNDGFQLVCGKKKKTPSH----GDEVHDSSFESSVKVATKDRKTLG 227
+E+E GR+V + D +DGFQ+V GKKKK + V+ VK+A +D+ + G
Sbjct: 126 KEKEIGRSV-VADDGDDGFQMVYGKKKKPVGNVVTGSAAVNGGGSVIDVKMAERDKNSSG 185
Query: 228 VKPKVPFHIPTIRRPQDEFNILVNNSNQPFEHVWLERSEDGSRFAHPLEKLSVLDFVDKI 287
K KVPFH+PTI++PQ+E+NILVNN+N PFEHVWLERSED R HPLEK SVLDFVDK
Sbjct: 186 -KAKVPFHVPTIKKPQEEYNILVNNANLPFEHVWLERSEDDLRAMHPLEKFSVLDFVDKD 245
Query: 288 NADFQPVYPPSLDCTPFKFIEEVNDLKELAAKLQGVNEFAVDLEHNQYRSFQGLTCLMQI 347
+ +PV P L+ TPFKF++EV DLKEL AKL+ V EFAVDLEHNQYRSFQGLTCLMQI
Sbjct: 246 VNEMEPVKPLPLEQTPFKFVQEVKDLKELVAKLRSVEEFAVDLEHNQYRSFQGLTCLMQI 305
Query: 348 STRTEDFVVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDIVWLQRDFGIYICNLFDTG 407
STRTED++VDT KLRIH+GPYLRE+FKDP KKKV+HGADRDI+WLQRDFGIY+CNLFDTG
Sbjct: 306 STRTEDYIVDTFKLRIHIGPYLREIFKDPKKKKVMHGADRDIIWLQRDFGIYVCNLFDTG 365
Query: 408 QASRVLKLERNSLEYLLHHFCGVAANKE 428
QASRVL LERNSLE+LL HFCGV ANKE
Sbjct: 366 QASRVLNLERNSLEFLLQHFCGVTANKE 391
BLAST of Carg13361 vs. TAIR 10
Match:
AT1G54440.1 (Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain )
HSP 1 Score: 344.4 bits (882), Expect = 1.3e-94
Identity = 171/279 (61.29%), Postives = 205/279 (73.48%), Query Frame = 0
Query: 150 RFDVSLDEFQRIRKEEEESGRAVALMADSNDGFQLVCGKKKKTPSHGDEVHDSSFESSVK 209
RFD +DEF+R RK EE+S + + VK
Sbjct: 2 RFDDPMDEFKRNRKMEEDSKKVI----------------------------------DVK 61
Query: 210 VATKDRKTLGV-KPKVPFHIPTIRRPQDEFNILVNNSNQPFEHVWLERSEDGSRFAHPLE 269
VA D+ K +VPFHIPT+ +PQ+E+ ILV+N+N PFEHV LE+SEDG RF HPLE
Sbjct: 62 VAESDKGFAKFGKAEVPFHIPTLTKPQEEYKILVDNANNPFEHVLLEKSEDGLRFIHPLE 121
Query: 270 KLSVLDFVDKINADFQPVYPPSLDCTPFKFIEEVNDLKELAAKLQGVNEFAVDLEHNQYR 329
+LSV+DFVD+ ++ +PV P L+ TPFK +EEV DL++LAA LQ V EFAVDLEHNQYR
Sbjct: 122 ELSVMDFVDRNLSEMRPVKPLPLEETPFKLVEEVKDLEDLAAALQSVEEFAVDLEHNQYR 181
Query: 330 SFQGLTCLMQISTRTEDFVVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDIVWLQRDF 389
+FQGLTCLMQISTRTED++VD KL H+GPYLRE+FKDP KKKV+HGADRDI+WLQRDF
Sbjct: 182 TFQGLTCLMQISTRTEDYIVDIFKLWDHIGPYLRELFKDPKKKKVIHGADRDIIWLQRDF 241
Query: 390 GIYICNLFDTGQASRVLKLERNSLEYLLHHFCGVAANKE 428
GIY+CNLFDTGQASRVLKLERNSLE+LL H+CGVAANKE
Sbjct: 242 GIYVCNLFDTGQASRVLKLERNSLEFLLKHYCGVAANKE 246
BLAST of Carg13361 vs. TAIR 10
Match:
AT1G54440.2 (Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain )
HSP 1 Score: 344.4 bits (882), Expect = 1.3e-94
Identity = 171/279 (61.29%), Postives = 205/279 (73.48%), Query Frame = 0
Query: 150 RFDVSLDEFQRIRKEEEESGRAVALMADSNDGFQLVCGKKKKTPSHGDEVHDSSFESSVK 209
RFD +DEF+R RK EE+S + + VK
Sbjct: 2 RFDDPMDEFKRNRKMEEDSKKVI----------------------------------DVK 61
Query: 210 VATKDRKTLGV-KPKVPFHIPTIRRPQDEFNILVNNSNQPFEHVWLERSEDGSRFAHPLE 269
VA D+ K +VPFHIPT+ +PQ+E+ ILV+N+N PFEHV LE+SEDG RF HPLE
Sbjct: 62 VAESDKGFAKFGKAEVPFHIPTLTKPQEEYKILVDNANNPFEHVLLEKSEDGLRFIHPLE 121
Query: 270 KLSVLDFVDKINADFQPVYPPSLDCTPFKFIEEVNDLKELAAKLQGVNEFAVDLEHNQYR 329
+LSV+DFVD+ ++ +PV P L+ TPFK +EEV DL++LAA LQ V EFAVDLEHNQYR
Sbjct: 122 ELSVMDFVDRNLSEMRPVKPLPLEETPFKLVEEVKDLEDLAAALQSVEEFAVDLEHNQYR 181
Query: 330 SFQGLTCLMQISTRTEDFVVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDIVWLQRDF 389
+FQGLTCLMQISTRTED++VD KL H+GPYLRE+FKDP KKKV+HGADRDI+WLQRDF
Sbjct: 182 TFQGLTCLMQISTRTEDYIVDIFKLWDHIGPYLRELFKDPKKKKVIHGADRDIIWLQRDF 241
Query: 390 GIYICNLFDTGQASRVLKLERNSLEYLLHHFCGVAANKE 428
GIY+CNLFDTGQASRVLKLERNSLE+LL H+CGVAANKE
Sbjct: 242 GIYVCNLFDTGQASRVLKLERNSLEFLLKHYCGVAANKE 246
BLAST of Carg13361 vs. TAIR 10
Match:
AT2G32415.1 (Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain )
HSP 1 Score: 140.6 bits (353), Expect = 3.0e-33
Identity = 86/200 (43.00%), Postives = 111/200 (55.50%), Query Frame = 0
Query: 233 RPQDEF-NILVNNSNQPFEHVWLERSEDGS----RFAHPLE-KLSVLDFVDKINADFQPV 292
+PQ F +L +NS F+H+ L + S HP E +++VL +I F
Sbjct: 50 KPQFGFKRVLADNSYSEFKHLKLVDASSSSLEKPSNGHPYETEITVLLENPQIEFGFLRG 109
Query: 293 YPPSLDCTPFKFIEEVNDLKELAAKLQGVNEFAVDLEHNQYRSFQGLTCLMQISTRTEDF 352
+ ++E + LKELA L FAVD E + RSF G T L+QIST EDF
Sbjct: 110 ECSLEMSDSYVWVETESQLKELAEILAKEQVFAVDTEQHSLRSFLGFTALIQISTHEEDF 169
Query: 353 VVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDIVWLQRDFGIYICNLFDTGQASRVLK 412
+VDT+ L V LR VF DP+ KV HGAD D++WLQRDF IY+ N+FDT +A VL
Sbjct: 170 LVDTIALH-DVMSILRPVFSDPNICKVFHGADNDVIWLQRDFHIYVVNMFDTAKACEVLS 229
Query: 413 LERNSLEYLLHHFCGVAANK 427
+ SL YLL CGVA NK
Sbjct: 230 KPQRSLAYLLETVCGVATNK 248
BLAST of Carg13361 vs. TAIR 10
Match:
AT2G32415.2 (Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain )
HSP 1 Score: 140.6 bits (353), Expect = 3.0e-33
Identity = 86/200 (43.00%), Postives = 111/200 (55.50%), Query Frame = 0
Query: 233 RPQDEF-NILVNNSNQPFEHVWLERSEDGS----RFAHPLE-KLSVLDFVDKINADFQPV 292
+PQ F +L +NS F+H+ L + S HP E +++VL +I F
Sbjct: 50 KPQFGFKRVLADNSYSEFKHLKLVDASSSSLEKPSNGHPYETEITVLLENPQIEFGFLRG 109
Query: 293 YPPSLDCTPFKFIEEVNDLKELAAKLQGVNEFAVDLEHNQYRSFQGLTCLMQISTRTEDF 352
+ ++E + LKELA L FAVD E + RSF G T L+QIST EDF
Sbjct: 110 ECSLEMSDSYVWVETESQLKELAEILAKEQVFAVDTEQHSLRSFLGFTALIQISTHEEDF 169
Query: 353 VVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDIVWLQRDFGIYICNLFDTGQASRVLK 412
+VDT+ L V LR VF DP+ KV HGAD D++WLQRDF IY+ N+FDT +A VL
Sbjct: 170 LVDTIALH-DVMSILRPVFSDPNICKVFHGADNDVIWLQRDFHIYVVNMFDTAKACEVLS 229
Query: 413 LERNSLEYLLHHFCGVAANK 427
+ SL YLL CGVA NK
Sbjct: 230 KPQRSLAYLLETVCGVATNK 248
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
A9LLI7 | 1.8e-144 | 67.01 | Protein RRP6-like 2 OS=Arabidopsis thaliana OX=3702 GN=RRP6L2 PE=2 SV=1 | [more] |
Q0WVE8 | 1.9e-93 | 61.29 | Protein RRP6-like 1 OS=Arabidopsis thaliana OX=3702 GN=RRP6L1 PE=2 SV=1 | [more] |
Q01780 | 3.0e-46 | 34.43 | Exosome component 10 OS=Homo sapiens OX=9606 GN=EXOSC10 PE=1 SV=2 | [more] |
P56960 | 3.3e-45 | 34.43 | Exosome component 10 OS=Mus musculus OX=10090 GN=Exosc10 PE=1 SV=2 | [more] |
Q10146 | 6.6e-38 | 32.25 | Exosome complex exonuclease rrp6 OS=Schizosaccharomyces pombe (strain 972 / ATCC... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1HSV6 | 3.4e-218 | 99.47 | protein RRP6-like 2 OS=Cucurbita maxima OX=3661 GN=LOC111465918 PE=4 SV=1 | [more] |
A0A6J1EHB5 | 1.3e-217 | 99.21 | protein RRP6-like 2 OS=Cucurbita moschata OX=3662 GN=LOC111432526 PE=4 SV=1 | [more] |
A0A0A0KYK9 | 1.0e-206 | 93.70 | HRDC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G188930 PE=4 S... | [more] |
A0A5A7TI59 | 2.5e-205 | 92.67 | Protein RRP6-like 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G0... | [more] |
A0A5D3DTL6 | 2.5e-205 | 92.67 | Protein RRP6-like 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold95G0... | [more] |
Match Name | E-value | Identity | Description | |
AT5G35910.1 | 1.3e-145 | 67.01 | Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain | [more] |
AT1G54440.1 | 1.3e-94 | 61.29 | Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain | [more] |
AT1G54440.2 | 1.3e-94 | 61.29 | Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain | [more] |
AT2G32415.1 | 3.0e-33 | 43.00 | Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain | [more] |
AT2G32415.2 | 3.0e-33 | 43.00 | Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain | [more] |