Carg13330 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg13330
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	GrpE protein homolog
Location	Carg_Chr07: 6494575 .. 6498534 (-)
RNA-Seq Expression	Carg13330
Synteny	Carg13330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTTCCCACTCTCCTCTCCTCTGCACCCTTATCTCTCTTCCTTTCTCTCTCGCTCTGTGATTTATCTCATGGCCACGATTCTCAGAGCTCCATTTTTTCAGGCAACTCCTCCGGCAAATGTATCCACCATCTTCTCTTCCAAATCCACCCTAAAGTCCTCATCTCTTTCCTTCAGAACTTCTCACTCTCCCTTTTATTGCATCAATTCCTCCAAGCTTTCTCGTCCTCGTTCTATCCGGTTCCCGAAGCTTGGCCCGTTTGCTTCCTCTGGAAATACGGAAGTTAGCGAGGTCGAAGAGGAAGTTCACGAATCTGAGGCTGAGGTACTTTAATTCTTTGGTTTCTTTCTCGAGCTAATGTAGTTTGATTCTTTAGTTTGTTAGGTTTGATAGTGTTCGAGGAGATTTAATGTTAGTTTTGGTGCTTGGATTGAATTAGAAGCTGGATGTTGTTTTTTTGCAGAGATGTTAATACAATCGCGTTGTTGTATCTAATAATATCGATTGGAATGAATTTGCCAAGTTTTGTGAGAGGGAATACGGAATTTTGGCACTATCTTTTGCTCATTGTGTATTTCTGGATTCTAATTGTTCTAGTGGATTGTATGTAGACATTCAGAGTCGGATGTTCTAGAGAGCTTTAGACCTTCTCAAAACTTACCTTGAAATTATCCACTTAACATTTGAAATTTTAGTGGAAACTAAAAAGTTGAGAGTATGGTAACAGTTTTGGTTGTTTTCCATTATTCGGAGTTTGGTTAAATTATTCTTTGCTGCTTTACTTGTCATTGATTTTGGTTCTTATTGACACCTCTCGGGCATATCTTTTAGTAAGTTTGTTTGAAGTAAATACTGCAACGGCCCAAGCCCACCGCTAATTGATATTGTCTTCTTTGGACTTTTCCTTTTGGGCTTACCGTCAAGGTTTTTAAAATGTGTATGCTAGAGAGAAGTTTTTACACCTTTATAAAAAATGTTTCGTTCTCCTCCCCAACCAACGTGGGATCTCACAATCTATCTTTTTCGAGGCTCATCATCTTCGTTGGCACTCGTTTCCTTCTCCAATCGATGTGGGACCTCCCCTTCGGGGCCCAGCATCCTTGTTGGCACATCGCCTCGTGTCCAACCTTCTTGCTGGCACATCGCCTGGTGTCTGCTACCATTTGTAACGGTTCAAGCCCACCGCTGACAGATATTGTCCTCTTTGGACTTTCCTTTCGGGGTTCCCCTCAAGGTTCTTAAAACGCGTTTGATAGGGAGAGGTTTTTACACCCTTATAAAGAACGTTTCGTTCTCCTCCCTAACCGACGTGGGATTTCACAAATACCATACTCGTCTCTTGATGAAGGTTTGGTTTCTTTATAACGAAACATGACCCATAAACTATAGTGTTTTAGACCTACAAGTTTCAAGTTTAAATTATTGATTTGATTTTTTAAAATTTGAAGATTTTTGATATTGCATGCTTAGGAAGTGTAATAACTTCTGACAATGAAAAATAGTTTCTCACGGCATGGATTTAGATTGTTTTAATTAAGTTTATGCATAAATCATGCCTTGCATTTTCTTGTTGCTCATATATTTATGTAACAGGACTCTTCTGTTAGTTATACTGGTGTGGAAGACGCTGCAAGTGATAGTGACATAAATGATGGTGCAGAAGTTAATGCTGAGGATTCACCTCAATCAGTCATCCTAGCAGCACTTCAATCTTATAAGCAGGCTTTAGCTGATAACAATGAATCTCAAATAGCTGAAATAGAATCTTTTCTGAAATCAATTGAAGATGAAAAGCTTGCAGCCGAAAGGAAATTGAAATCCTTAACTGAAGACCTTTCTGTAGAGAAGGATCGAATTTTGAGGATCAGTGCTGACTTCGAAAATTTTCGGAAGAGAACAGAGAGGGAACGTCTTTCCTTGGTAAAAAATGCCCAAGGGGAAGTAGTAGAGACTTTATTGGGTGTGCTGGATAATTTTGAGAGAGCCAGGGCACAGATCAAGGTGGAGACAGAGGGAGAAGAGAAGATAAATCAAAGTTACCAGAGCATTTATAAGCAGTTCAACGAGATTTTGGGCTCATTGGGTGTAGTTCCTGTCGAGACAGTTGGAAAACCTTTTGATCCACTGGTGAGTTTTTGCTTCCAGTCCACTTATTAAAATTTCAAAATCTCATCTGCCTGCCTTTATTCATCAAGTAAAGTCACTATTAATCAGTATGTGACTTCTAATATCTTTTAGTTAAAAAATGACCATCCTTTTTCGCTATCAAATTGTTTAAATTGTTCAGGTTCTTAGAGTATCTGACATGGTGGAGTAAAATGGTTGTATAGATTTAATGCCATTTATTTCAGTGAGATTGGTGATCAAACTCTGGAAACTAGTGGAGCTATAGGGCCTTTCCTTGCAAATCTAATGATCATAACTTGATGAACTTCCTCTGGTTAGTGTTAGGAATTACGGATCTCCACAATAGTATGATCTTGTCCATTTTGAGCATAAGCTCTCGTGGCTTTGCTTTGGGTTTCTCCAAAAGGCCTCAGACCAATGGAGATGTATTCCTTACTTATAAGCCCATGATCATTCTCTAAATTGGCCAATGTGGGACTCCTTCCCAATAATCCTCCCGTCTGTTTTTTTGATGAATGTCAAACGTGGATATAGTTTTAAGGCATCACCCTTGAGGATACATGTATTCGTGTAGATTTTGACCCTATGAAAACTATGATTGTGACTTTTTGCCTATGTGAAAGCCAACTCATTTTGGTTGCCCTCACTAAGAACTGTGATCTTTTTTGCATTATAATGTGAGAGAGTAAATCATATTTTCCTTGATAATAGTGCCTTTTGCAAAACATATTTTGGTTGCCCTCACAAGGCTATTATTTCTATTTCTATGTTTCTGTGTAATTTTGGATTATCTTCAAACCATTGAATTCTGAGCTGATATGTTTGTTTTTCTTTTTTGATTTATTGTTAATATGCATTCTAAACTGCATGACATGATCGACCATGGAATTAATCAGGGATCTGCTGTTTAATCTCTCCTCTCCTTTTGGGGACCAAGTTTGGTTAATTGAAACTTCTTTAATCAATTTCTTCTTACAGTTTCATGAAGCAATTATGAGGGAGGATTCCACAGAGTTTGAGGAAGGTATCATACTCGACGAGTTTCGTAAAGGATTCTTGCTCGGTGACAGACTCTTGCGTCCATCCATGGTGAAAGTATCGGCTGGTCCCGGACCCGAAAAGCCAGCCGAAGCAGCAGCACCATCAGAAGAACATGATTCAAGTGAGAATTATGAAAGATCCAATACGGAGTCATCTTAAAACGTAATTCCTCTACACCACCATCCAATTTTGAGTATAGTAAGAATCTTGTTTGTGCCTGATAAGAGACTGGAGATGAATTGAATCAGGCTTTTGCAGGCAGAGAGTTTTGATAATTTTGATGTCAGTGGAAATGTTGTAGTTTGATTTAGACATATTAATTCTCTCTCTAAAAACCCTGTTGTTCTAACATGTTGAGAGAGAATTTAGCAAAGGCTCTATTGTAAGTTTGTAGAATTGGTTGAATGTGGCTCCATTTGTGAGGCCAGAAAATGGCATGGTAGTCCACTCTTCATGAAGCTTCCTACTTTGTGTTTCATTTTCAAGCATTTTCCAGAACTAAAACAACTCTATTTTCAGAGCTTCTTATCAGGGGAAAGGTAGTCGCGGGTCGGGTCGGTTCAACGGATGCGGGTAGCGGTTCAGGTCAGACACAAGCATTCGGGTTAGGTCGGATCAGACAATGTGTGTCCCCACTCGGTGCCTGACGCCTTGCTCCTCTCTACGTGTGACATTTGTCCACCACACAACCAGTCGTGCTCTCCGCCTCGTAGTTCGACGAGTGTCTCTTCTTTCCTGTCTGTCTCCCTTAAGTTCTTTTTGATTATTTTCTAATTTCTTAATTTTTTTTTTT

mRNA sequence

ACTTCCCACTCTCCTCTCCTCTGCACCCTTATCTCTCTTCCTTTCTCTCTCGCTCTGTGATTTATCTCATGGCCACGATTCTCAGAGCTCCATTTTTTCAGGCAACTCCTCCGGCAAATGTATCCACCATCTTCTCTTCCAAATCCACCCTAAAGTCCTCATCTCTTTCCTTCAGAACTTCTCACTCTCCCTTTTATTGCATCAATTCCTCCAAGCTTTCTCGTCCTCGTTCTATCCGGTTCCCGAAGCTTGGCCCGTTTGCTTCCTCTGGAAATACGGAAGTTAGCGAGGTCGAAGAGGAAGTTCACGAATCTGAGGCTGAGGACTCTTCTGTTAGTTATACTGGTGTGGAAGACGCTGCAAGTGATAGTGACATAAATGATGGTGCAGAAGTTAATGCTGAGGATTCACCTCAATCAGTCATCCTAGCAGCACTTCAATCTTATAAGCAGGCTTTAGCTGATAACAATGAATCTCAAATAGCTGAAATAGAATCTTTTCTGAAATCAATTGAAGATGAAAAGCTTGCAGCCGAAAGGAAATTGAAATCCTTAACTGAAGACCTTTCTGTAGAGAAGGATCGAATTTTGAGGATCAGTGCTGACTTCGAAAATTTTCGGAAGAGAACAGAGAGGGAACGTCTTTCCTTGGTAAAAAATGCCCAAGGGGAAGTAGTAGAGACTTTATTGGGTGTGCTGGATAATTTTGAGAGAGCCAGGGCACAGATCAAGGTGGAGACAGAGGGAGAAGAGAAGATAAATCAAAGTTACCAGAGCATTTATAAGCAGTTCAACGAGATTTTGGGCTCATTGGGTGTAGTTCCTGTCGAGACAGTTGGAAAACCTTTTGATCCACTGTTTCATGAAGCAATTATGAGGGAGGATTCCACAGAGTTTGAGGAAGGTATCATACTCGACGAGTTTCGTAAAGGATTCTTGCTCGGTGACAGACTCTTGCGTCCATCCATGGTGAAAGTATCGGCTGGTCCCGGACCCGAAAAGCCAGCCGAAGCAGCAGCACCATCAGAAGAACATGATTCAAGTGAGAATTATGAAAGATCCAATACGGAGTCATCTTAAAACGTAATTCCTCTACACCACCATCCAATTTTGAGTATAGTAAGAATCTTGTTTGTGCCTGATAAGAGACTGGAGATGAATTGAATCAGGCTTTTGCAGGCAGAGAGTTTTGATAATTTTGATGTCAGTGGAAATGTTGTAGTTTGATTTAGACATATTAATTCTCTCTCTAAAAACCCTGTTGTTCTAACATGTTGAGAGAGAATTTAGCAAAGGCTCTATTGTAAGTTTGTAGAATTGGTTGAATGTGGCTCCATTTGTGAGGCCAGAAAATGGCATGGTAGTCCACTCTTCATGAAGCTTCCTACTTTGTGTTTCATTTTCAAGCATTTTCCAGAACTAAAACAACTCTATTTTCAGAGCTTCTTATCAGGGGAAAGGTAGTCGCGGGTCGGGTCGGTTCAACGGATGCGGGTAGCGGTTCAGGTCAGACACAAGCATTCGGGTTAGGTCGGATCAGACAATGTGTGTCCCCACTCGGTGCCTGACGCCTTGCTCCTCTCTACGTGTGACATTTGTCCACCACACAACCAGTCGTGCTCTCCGCCTCGTAGTTCGACGAGTGTCTCTTCTTTCCTGTCTGTCTCCCTTAAGTTCTTTTTGATTATTTTCTAATTTCTTAATTTTTTTTTTT

Coding sequence (CDS)

ATGGCCACGATTCTCAGAGCTCCATTTTTTCAGGCAACTCCTCCGGCAAATGTATCCACCATCTTCTCTTCCAAATCCACCCTAAAGTCCTCATCTCTTTCCTTCAGAACTTCTCACTCTCCCTTTTATTGCATCAATTCCTCCAAGCTTTCTCGTCCTCGTTCTATCCGGTTCCCGAAGCTTGGCCCGTTTGCTTCCTCTGGAAATACGGAAGTTAGCGAGGTCGAAGAGGAAGTTCACGAATCTGAGGCTGAGGACTCTTCTGTTAGTTATACTGGTGTGGAAGACGCTGCAAGTGATAGTGACATAAATGATGGTGCAGAAGTTAATGCTGAGGATTCACCTCAATCAGTCATCCTAGCAGCACTTCAATCTTATAAGCAGGCTTTAGCTGATAACAATGAATCTCAAATAGCTGAAATAGAATCTTTTCTGAAATCAATTGAAGATGAAAAGCTTGCAGCCGAAAGGAAATTGAAATCCTTAACTGAAGACCTTTCTGTAGAGAAGGATCGAATTTTGAGGATCAGTGCTGACTTCGAAAATTTTCGGAAGAGAACAGAGAGGGAACGTCTTTCCTTGGTAAAAAATGCCCAAGGGGAAGTAGTAGAGACTTTATTGGGTGTGCTGGATAATTTTGAGAGAGCCAGGGCACAGATCAAGGTGGAGACAGAGGGAGAAGAGAAGATAAATCAAAGTTACCAGAGCATTTATAAGCAGTTCAACGAGATTTTGGGCTCATTGGGTGTAGTTCCTGTCGAGACAGTTGGAAAACCTTTTGATCCACTGTTTCATGAAGCAATTATGAGGGAGGATTCCACAGAGTTTGAGGAAGGTATCATACTCGACGAGTTTCGTAAAGGATTCTTGCTCGGTGACAGACTCTTGCGTCCATCCATGGTGAAAGTATCGGCTGGTCCCGGACCCGAAAAGCCAGCCGAAGCAGCAGCACCATCAGAAGAACATGATTCAAGTGAGAATTATGAAAGATCCAATACGGAGTCATCTTAA

Protein sequence

MATILRAPFFQATPPANVSTIFSSKSTLKSSSLSFRTSHSPFYCINSSKLSRPRSIRFPKLGPFASSGNTEVSEVEEEVHESEAEDSSVSYTGVEDAASDSDINDGAEVNAEDSPQSVILAALQSYKQALADNNESQIAEIESFLKSIEDEKLAAERKLKSLTEDLSVEKDRILRISADFENFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQFNEILGSLGVVPVETVGKPFDPLFHEAIMREDSTEFEEGIILDEFRKGFLLGDRLLRPSMVKVSAGPGPEKPAEAAAPSEEHDSSENYERSNTESS

Homology

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BLAST of Carg13330 vs. NCBI nr
Match: KAG7027449.1 (grpE [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 618.6 bits (1594), Expect = 3.1e-173
Identity = 336/336 (100.00%), Postives = 336/336 (100.00%), Query Frame = 0


Query: 1   MATILRAPFFQATPPANVSTIFSSKSTLKSSSLSFRTSHSPFYCINSSKLSRPRSIRFPK 60
           MATILRAPFFQATPPANVSTIFSSKSTLKSSSLSFRTSHSPFYCINSSKLSRPRSIRFPK
Sbjct: 1   MATILRAPFFQATPPANVSTIFSSKSTLKSSSLSFRTSHSPFYCINSSKLSRPRSIRFPK 60

Query: 61  LGPFASSGNTEVSEVEEEVHESEAEDSSVSYTGVEDAASDSDINDGAEVNAEDSPQSVIL 120
           LGPFASSGNTEVSEVEEEVHESEAEDSSVSYTGVEDAASDSDINDGAEVNAEDSPQSVIL
Sbjct: 61  LGPFASSGNTEVSEVEEEVHESEAEDSSVSYTGVEDAASDSDINDGAEVNAEDSPQSVIL 120

Query: 121 AALQSYKQALADNNESQIAEIESFLKSIEDEKLAAERKLKSLTEDLSVEKDRILRISADF 180
           AALQSYKQALADNNESQIAEIESFLKSIEDEKLAAERKLKSLTEDLSVEKDRILRISADF
Sbjct: 121 AALQSYKQALADNNESQIAEIESFLKSIEDEKLAAERKLKSLTEDLSVEKDRILRISADF 180

Query: 181 ENFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQ 240
           ENFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQ
Sbjct: 181 ENFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQ 240

Query: 241 FNEILGSLGVVPVETVGKPFDPLFHEAIMREDSTEFEEGIILDEFRKGFLLGDRLLRPSM 300
           FNEILGSLGVVPVETVGKPFDPLFHEAIMREDSTEFEEGIILDEFRKGFLLGDRLLRPSM
Sbjct: 241 FNEILGSLGVVPVETVGKPFDPLFHEAIMREDSTEFEEGIILDEFRKGFLLGDRLLRPSM 300

Query: 301 VKVSAGPGPEKPAEAAAPSEEHDSSENYERSNTESS 337
           VKVSAGPGPEKPAEAAAPSEEHDSSENYERSNTESS
Sbjct: 301 VKVSAGPGPEKPAEAAAPSEEHDSSENYERSNTESS 336

[Close]

BLAST of Carg13330 vs. NCBI nr
Match: XP_022925257.1 (uncharacterized protein LOC111432550 [Cucurbita moschata] >XP_022925258.1 uncharacterized protein LOC111432550 [Cucurbita moschata])

HSP 1 Score: 616.3 bits (1588), Expect = 1.6e-172
Identity = 335/336 (99.70%), Postives = 335/336 (99.70%), Query Frame = 0


Query: 1   MATILRAPFFQATPPANVSTIFSSKSTLKSSSLSFRTSHSPFYCINSSKLSRPRSIRFPK 60
           MATILRAPFFQATPPANVSTIFSSKSTLKSSSLSFRTSHSPFYCINSSKLSRPRSIRFPK
Sbjct: 1   MATILRAPFFQATPPANVSTIFSSKSTLKSSSLSFRTSHSPFYCINSSKLSRPRSIRFPK 60

Query: 61  LGPFASSGNTEVSEVEEEVHESEAEDSSVSYTGVEDAASDSDINDGAEVNAEDSPQSVIL 120
           LGPFASSGNTEVSEVEEEVHESEAEDSSVSYTGVEDAASDSDINDGAEVNAEDSPQSVIL
Sbjct: 61  LGPFASSGNTEVSEVEEEVHESEAEDSSVSYTGVEDAASDSDINDGAEVNAEDSPQSVIL 120

Query: 121 AALQSYKQALADNNESQIAEIESFLKSIEDEKLAAERKLKSLTEDLSVEKDRILRISADF 180
           AALQSYKQALADNNESQIAEIESFLKSIEDEKLAAERKLKSLTEDLSVEKDRILRISADF
Sbjct: 121 AALQSYKQALADNNESQIAEIESFLKSIEDEKLAAERKLKSLTEDLSVEKDRILRISADF 180

Query: 181 ENFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQ 240
           ENFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQ
Sbjct: 181 ENFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQ 240

Query: 241 FNEILGSLGVVPVETVGKPFDPLFHEAIMREDSTEFEEGIILDEFRKGFLLGDRLLRPSM 300
           FNEILGSLGVVPVETVGKPFDPL HEAIMREDSTEFEEGIILDEFRKGFLLGDRLLRPSM
Sbjct: 241 FNEILGSLGVVPVETVGKPFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLGDRLLRPSM 300

Query: 301 VKVSAGPGPEKPAEAAAPSEEHDSSENYERSNTESS 337
           VKVSAGPGPEKPAEAAAPSEEHDSSENYERSNTESS
Sbjct: 301 VKVSAGPGPEKPAEAAAPSEEHDSSENYERSNTESS 336

[Close]

BLAST of Carg13330 vs. NCBI nr
Match: XP_023517558.1 (uncharacterized protein LOC111781285 [Cucurbita pepo subsp. pepo] >XP_023517559.1 uncharacterized protein LOC111781285 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 601.7 bits (1550), Expect = 4.0e-168
Identity = 329/336 (97.92%), Postives = 332/336 (98.81%), Query Frame = 0


Query: 1   MATILRAPFFQATPPANVSTIFSSKSTLKSSSLSFRTSHSPFYCINSSKLSRPRSIRFPK 60
           MATILRAPFFQATPPANVST+FSSKSTLKSSSLSFRTSHS F C+NSSKLSRPRSIRFPK
Sbjct: 1   MATILRAPFFQATPPANVSTVFSSKSTLKSSSLSFRTSHSTFCCVNSSKLSRPRSIRFPK 60

Query: 61  LGPFASSGNTEVSEVEEEVHESEAEDSSVSYTGVEDAASDSDINDGAEVNAEDSPQSVIL 120
           LGPFASSGNTEVSEVEEEVHESEAEDSSVSYTGVEDAASDSDINDGAEVNAEDSPQSVIL
Sbjct: 61  LGPFASSGNTEVSEVEEEVHESEAEDSSVSYTGVEDAASDSDINDGAEVNAEDSPQSVIL 120

Query: 121 AALQSYKQALADNNESQIAEIESFLKSIEDEKLAAERKLKSLTEDLSVEKDRILRISADF 180
           AALQSYKQALADNNESQIAEIESFLKSIEDEKLAAERKLKSLTEDLSVEKDRILRISADF
Sbjct: 121 AALQSYKQALADNNESQIAEIESFLKSIEDEKLAAERKLKSLTEDLSVEKDRILRISADF 180

Query: 181 ENFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQ 240
           ENFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQ
Sbjct: 181 ENFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQ 240

Query: 241 FNEILGSLGVVPVETVGKPFDPLFHEAIMREDSTEFEEGIILDEFRKGFLLGDRLLRPSM 300
           FNEILGSLGVVPVETVGKPFDPL HEAIMREDSTEF+EGIILDEFRKGFLLGDRLLRPSM
Sbjct: 241 FNEILGSLGVVPVETVGKPFDPLLHEAIMREDSTEFDEGIILDEFRKGFLLGDRLLRPSM 300

Query: 301 VKVSAGPGPEKPAEAAAPSEEHDSSENYERSNTESS 337
           VKVSAGPGPEKPAE AAPSEEHDSSENYERSNTESS
Sbjct: 301 VKVSAGPGPEKPAE-AAPSEEHDSSENYERSNTESS 335

[Close]

BLAST of Carg13330 vs. NCBI nr
Match: XP_022966384.1 (uncharacterized protein LOC111466047 [Cucurbita maxima] >XP_022966385.1 uncharacterized protein LOC111466047 [Cucurbita maxima])

HSP 1 Score: 598.2 bits (1541), Expect = 4.4e-167
Identity = 331/338 (97.93%), Postives = 331/338 (97.93%), Query Frame = 0


Query: 1   MATILRAPFFQATPPANVSTIFSSKST--LKSSSLSFRTSHSPFYCINSSKLSRPRSIRF 60
           MATILRAPFFQATPPANVSTIFSSKST  LK SSLSFRTSHSPF CINSSKLSRPRSIRF
Sbjct: 1   MATILRAPFFQATPPANVSTIFSSKSTLKLKPSSLSFRTSHSPFCCINSSKLSRPRSIRF 60

Query: 61  PKLGPFASSGNTEVSEVEEEVHESEAEDSSVSYTGVEDAASDSDINDGAEVNAEDSPQSV 120
           PKLGPFASSGNTEVSEVEEEVHESEAEDSSVSYTGVEDAASDSDINDGAEVNAEDSPQSV
Sbjct: 61  PKLGPFASSGNTEVSEVEEEVHESEAEDSSVSYTGVEDAASDSDINDGAEVNAEDSPQSV 120

Query: 121 ILAALQSYKQALADNNESQIAEIESFLKSIEDEKLAAERKLKSLTEDLSVEKDRILRISA 180
           ILAALQSYKQALADNNESQIAEIESFLKSIEDEKLA ERKLKSLTEDLSVEKDRILRISA
Sbjct: 121 ILAALQSYKQALADNNESQIAEIESFLKSIEDEKLAVERKLKSLTEDLSVEKDRILRISA 180

Query: 181 DFENFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIY 240
           DFENFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIY
Sbjct: 181 DFENFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIY 240

Query: 241 KQFNEILGSLGVVPVETVGKPFDPLFHEAIMREDSTEFEEGIILDEFRKGFLLGDRLLRP 300
           KQFNEILGSLGVVPVETVGKPFDPL HEAIMREDSTEFEEGIILDEFRKGFLLGDRLLRP
Sbjct: 241 KQFNEILGSLGVVPVETVGKPFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLGDRLLRP 300

Query: 301 SMVKVSAGPGPEKPAEAAAPSEEHDSSENYERSNTESS 337
           SMVKVSAGPGPEKPAE AAPSEEHDSSENYERSNTESS
Sbjct: 301 SMVKVSAGPGPEKPAE-AAPSEEHDSSENYERSNTESS 337

[Close]

BLAST of Carg13330 vs. NCBI nr
Match: KAG6595450.1 (hypothetical protein SDJN03_12003, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 586.6 bits (1511), Expect = 1.3e-163
Identity = 320/324 (98.77%), Postives = 320/324 (98.77%), Query Frame = 0


Query: 1   MATILRAPFFQATPPANVSTIFSSKSTLKSSSLSFRTSHSPFYCINSSKLSRPRSIRFPK 60
           MATILRAPFFQATPPANVSTIFS KSTLKS SLSFRTSHSPFYCINSSKLSRPRSIRFPK
Sbjct: 1   MATILRAPFFQATPPANVSTIFSYKSTLKSLSLSFRTSHSPFYCINSSKLSRPRSIRFPK 60

Query: 61  LGPFASSGNTEVSEVEEEVHESEAEDSSVSYTGVEDAASDSDINDGAEVNAEDSPQSVIL 120
           LGPFASSGNTEVSEVEEEVHESEAEDSSVSYTGVEDAASDSDINDGAEVNAEDSPQSVIL
Sbjct: 61  LGPFASSGNTEVSEVEEEVHESEAEDSSVSYTGVEDAASDSDINDGAEVNAEDSPQSVIL 120

Query: 121 AALQSYKQALADNNESQIAEIESFLKSIEDEKLAAERKLKSLTEDLSVEKDRILRISADF 180
           AALQSYKQALADNNESQIAEIESFLKSIEDEKLAAERKLKSLTEDLSVEKDRILRISADF
Sbjct: 121 AALQSYKQALADNNESQIAEIESFLKSIEDEKLAAERKLKSLTEDLSVEKDRILRISADF 180

Query: 181 ENFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQ 240
           ENFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQ
Sbjct: 181 ENFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQ 240

Query: 241 FNEILGSLGVVPVETVGKPFDPLFHEAIMREDSTEFEEGIILDEFRKGFLLGDRLLRPSM 300
           FNEILGSLGVVPVETVGKPFDPL HEAIMREDSTEFEEGIILDEFRKGFLLGDRLLRPSM
Sbjct: 241 FNEILGSLGVVPVETVGKPFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLGDRLLRPSM 300

Query: 301 VKVSAGPGPEKPAEAAAPSEEHDS 325
           VKVSAGPGPEKPAE AAPSEEHDS
Sbjct: 301 VKVSAGPGPEKPAE-AAPSEEHDS 323

[Close]

BLAST of Carg13330 vs. ExPASy Swiss-Prot
Match: Q8DJB3 (Protein GrpE OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=grpE PE=3 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.7e-33
Identity = 79/174 (45.40%), Postives = 116/174 (66.67%), Query Frame = 0


Query: 135 ESQIAEIESFLKSIEDEKLAA-ERKLKSLTEDLSVEKDRILRISADFENFRKRTERERLS 194
           E Q +E  S   +   E++AA E    SL++ +     + +R++ADFENFRKRT+RE+  
Sbjct: 62  EDQASEATSANAADLLEQIAALEAAKASLSQVVEERNSQYIRLAADFENFRKRTQREKEE 121

Query: 195 LVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQFNEILGSLGVVPV 254
           L    +  V+  LL V+D+FE AR  I+ ETE EEKI++SYQ +YKQ  E L  +GV  +
Sbjct: 122 LELQIKCSVIADLLPVVDSFELARTHIQTETEAEEKIHRSYQGVYKQLVECLKRIGVSAM 181

Query: 255 ETVGKPFDPLFHEAIMREDSTEFEEGIILDEFRKGFLLGDRLLRPSMVKVSAGP 308
           +  GKPFDP  HEA++RE + E  EG +++E ++G++LGDR+LR +MVKV+A P
Sbjct: 182 QAKGKPFDPNLHEAVLREATNEHPEGTVIEELKRGYMLGDRVLRHAMVKVAAPP 235

[Close]

BLAST of Carg13330 vs. ExPASy Swiss-Prot
Match: Q7UA77 (Protein GrpE OS=Synechococcus sp. (strain WH8102) OX=84588 GN=grpE PE=3 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 5.6e-32
Identity = 70/169 (41.42%), Postives = 113/169 (66.86%), Query Frame = 0


Query: 156 ERKLKSLTEDLSVEKDRILRISADFENFRKRTERERLSLVKNAQGEVVETLLGVLDNFER 215
           E +L++L ++    + + +RI+ADF+NFRKR  R++  + +      +  +L V+DNFER
Sbjct: 50  EHELQTLKQEHETLQSQYMRIAADFDNFRKRQSRDQEDIRQQLVCSTLSEILPVVDNFER 109

Query: 216 ARAQIKVETEGEEKINQSYQSIYKQFNEILGSLGVVPVETVGKPFDPLFHEAIMREDSTE 275
           AR Q+  E+E  + +++SYQ +YKQ  ++L   GV  +E VG+ FDP  HEA++RE+STE
Sbjct: 110 ARQQLNPESEEAQALHRSYQGLYKQLVDVLKQQGVARMEVVGQLFDPTLHEAVLREESTE 169

Query: 276 FEEGIILDEFRKGFLLGDRLLRPSMVKVSAGPGPEKPAEAAAPSEEHDS 325
             E ++++E ++G+ L  ++LR ++VKVS GPGP   AE AA +E  DS
Sbjct: 170 QPEDVVIEELQRGYHLNGKVLRHALVKVSMGPGPSADAEGAASAEAEDS 218

[Close]

BLAST of Carg13330 vs. ExPASy Swiss-Prot
Match: Q8YUA7 (Protein GrpE OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=grpE PE=3 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.2e-31
Identity = 75/169 (44.38%), Postives = 109/169 (64.50%), Query Frame = 0


Query: 157 RKLKSLTEDLSVEKDRILRISADFENFRKRTERERLSLVKNAQGEVVETLLGVLDNFERA 216
           +++ SL   L     + +RI+ADFEN+RKRT++E+  L    +   +  LL ++DNFERA
Sbjct: 82  QQISSLKTQLDERSTQYMRIAADFENYRKRTQKEKEELDLQVKRNTILELLPIVDNFERA 141

Query: 217 RAQIKVETEGEEKINQSYQSIYKQFNEILGSLGVVPVETVGKPFDPLFHEAIMREDSTEF 276
           R+ +K +TE E  I++SYQ +YKQ  + L  LGV P+   G+ FDP  HEA+MRE + E 
Sbjct: 142 RSHLKPQTESEMTIHKSYQGVYKQLVDSLKRLGVSPMRPEGQEFDPNLHEAVMREPTDEH 201

Query: 277 EEGIILDEFRKGFLLGDRLLRPSMVKVSAGPGPEKPAEAAAPSEEHDSS 326
            EG +L+E  +G+ LGDR+LR SMVKV+A      P E   P++E+ SS
Sbjct: 202 PEGTVLEELVRGYYLGDRVLRHSMVKVAA------PKEDTLPAQENQSS 244

[Close]

BLAST of Carg13330 vs. ExPASy Swiss-Prot
Match: Q3MG83 (Protein GrpE OS=Trichormus variabilis (strain ATCC 29413 / PCC 7937) OX=240292 GN=grpE PE=3 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.2e-31
Identity = 75/169 (44.38%), Postives = 109/169 (64.50%), Query Frame = 0


Query: 157 RKLKSLTEDLSVEKDRILRISADFENFRKRTERERLSLVKNAQGEVVETLLGVLDNFERA 216
           +++ SL   L     + +RI+ADFEN+RKRT++E+  L    +   +  LL ++DNFERA
Sbjct: 82  QQINSLKTQLDERSTQYMRIAADFENYRKRTQKEKEELDLQVKRNTILELLPIVDNFERA 141

Query: 217 RAQIKVETEGEEKINQSYQSIYKQFNEILGSLGVVPVETVGKPFDPLFHEAIMREDSTEF 276
           R+ +K +TE E  I++SYQ +YKQ  + L  LGV P+   G+ FDP  HEA+MRE + E 
Sbjct: 142 RSHLKPQTESEMTIHKSYQGVYKQLVDSLKRLGVSPMRPEGQEFDPNLHEAVMREPTDEH 201

Query: 277 EEGIILDEFRKGFLLGDRLLRPSMVKVSAGPGPEKPAEAAAPSEEHDSS 326
            EG +L+E  +G+ LGDR+LR SMVKV+A      P E   P++E+ SS
Sbjct: 202 PEGTVLEELVRGYYLGDRVLRHSMVKVAA------PKEDTLPAQENQSS 244

[Close]

BLAST of Carg13330 vs. ExPASy Swiss-Prot
Match: B7KLH9 (Protein GrpE OS=Gloeothece citriformis (strain PCC 7424) OX=65393 GN=grpE PE=3 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 2.8e-31
Identity = 79/202 (39.11%), Postives = 122/202 (60.40%), Query Frame = 0


Query: 119 ILAALQSYKQALADNNESQIAEIESFLKSIEDEKLAAERKLKSLTEDLSVEKDRILRISA 178
           IL  LQ     L   NES +   +S    +E++            + +   K R + ++A
Sbjct: 87  ILGQLQPLLTNLIQQNESLLQTNQSLKDQLEEQ-----------NQQIDAAKRRYIGLAA 146

Query: 179 DFENFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIY 238
           +F+NFRKRT RE+  L K A+ + +  LL V+DNFERAR QIK   EGE +I++SYQ +Y
Sbjct: 147 EFDNFRKRTLREKEELEKQAKRKTLSELLTVVDNFERARLQIKPSNEGEGEIHKSYQGVY 206

Query: 239 KQFNEILGSLGVVPVETVGKPFDPLFHEAIMREDSTEFEEGIILDEFRKGFLLGDRLLRP 298
           K   + L  LGV  +   G+PFDP++HEA++RE + +F EG ++++  +G+LL D++LR 
Sbjct: 207 KNLVDSLKRLGVSAMRAEGEPFDPMYHEAMLREPTNDFPEGTVIEQLVRGYLLDDQVLRH 266

Query: 299 SMVKVSAGPGPEKPAEAAAPSE 321
           +MVKV+A   P+  +E  + SE
Sbjct: 267 AMVKVAAPKEPDS-SETESTSE 276

[Close]

BLAST of Carg13330 vs. ExPASy TrEMBL
Match: A0A6J1EBA2 (GrpE protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111432550 PE=3 SV=1)

HSP 1 Score: 616.3 bits (1588), Expect = 7.5e-173
Identity = 335/336 (99.70%), Postives = 335/336 (99.70%), Query Frame = 0


Query: 1   MATILRAPFFQATPPANVSTIFSSKSTLKSSSLSFRTSHSPFYCINSSKLSRPRSIRFPK 60
           MATILRAPFFQATPPANVSTIFSSKSTLKSSSLSFRTSHSPFYCINSSKLSRPRSIRFPK
Sbjct: 1   MATILRAPFFQATPPANVSTIFSSKSTLKSSSLSFRTSHSPFYCINSSKLSRPRSIRFPK 60

Query: 61  LGPFASSGNTEVSEVEEEVHESEAEDSSVSYTGVEDAASDSDINDGAEVNAEDSPQSVIL 120
           LGPFASSGNTEVSEVEEEVHESEAEDSSVSYTGVEDAASDSDINDGAEVNAEDSPQSVIL
Sbjct: 61  LGPFASSGNTEVSEVEEEVHESEAEDSSVSYTGVEDAASDSDINDGAEVNAEDSPQSVIL 120

Query: 121 AALQSYKQALADNNESQIAEIESFLKSIEDEKLAAERKLKSLTEDLSVEKDRILRISADF 180
           AALQSYKQALADNNESQIAEIESFLKSIEDEKLAAERKLKSLTEDLSVEKDRILRISADF
Sbjct: 121 AALQSYKQALADNNESQIAEIESFLKSIEDEKLAAERKLKSLTEDLSVEKDRILRISADF 180

Query: 181 ENFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQ 240
           ENFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQ
Sbjct: 181 ENFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQ 240

Query: 241 FNEILGSLGVVPVETVGKPFDPLFHEAIMREDSTEFEEGIILDEFRKGFLLGDRLLRPSM 300
           FNEILGSLGVVPVETVGKPFDPL HEAIMREDSTEFEEGIILDEFRKGFLLGDRLLRPSM
Sbjct: 241 FNEILGSLGVVPVETVGKPFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLGDRLLRPSM 300

Query: 301 VKVSAGPGPEKPAEAAAPSEEHDSSENYERSNTESS 337
           VKVSAGPGPEKPAEAAAPSEEHDSSENYERSNTESS
Sbjct: 301 VKVSAGPGPEKPAEAAAPSEEHDSSENYERSNTESS 336

[Close]

BLAST of Carg13330 vs. ExPASy TrEMBL
Match: A0A6J1HTM7 (GrpE protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111466047 PE=3 SV=1)

HSP 1 Score: 598.2 bits (1541), Expect = 2.1e-167
Identity = 331/338 (97.93%), Postives = 331/338 (97.93%), Query Frame = 0


Query: 1   MATILRAPFFQATPPANVSTIFSSKST--LKSSSLSFRTSHSPFYCINSSKLSRPRSIRF 60
           MATILRAPFFQATPPANVSTIFSSKST  LK SSLSFRTSHSPF CINSSKLSRPRSIRF
Sbjct: 1   MATILRAPFFQATPPANVSTIFSSKSTLKLKPSSLSFRTSHSPFCCINSSKLSRPRSIRF 60

Query: 61  PKLGPFASSGNTEVSEVEEEVHESEAEDSSVSYTGVEDAASDSDINDGAEVNAEDSPQSV 120
           PKLGPFASSGNTEVSEVEEEVHESEAEDSSVSYTGVEDAASDSDINDGAEVNAEDSPQSV
Sbjct: 61  PKLGPFASSGNTEVSEVEEEVHESEAEDSSVSYTGVEDAASDSDINDGAEVNAEDSPQSV 120

Query: 121 ILAALQSYKQALADNNESQIAEIESFLKSIEDEKLAAERKLKSLTEDLSVEKDRILRISA 180
           ILAALQSYKQALADNNESQIAEIESFLKSIEDEKLA ERKLKSLTEDLSVEKDRILRISA
Sbjct: 121 ILAALQSYKQALADNNESQIAEIESFLKSIEDEKLAVERKLKSLTEDLSVEKDRILRISA 180

Query: 181 DFENFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIY 240
           DFENFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIY
Sbjct: 181 DFENFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIY 240

Query: 241 KQFNEILGSLGVVPVETVGKPFDPLFHEAIMREDSTEFEEGIILDEFRKGFLLGDRLLRP 300
           KQFNEILGSLGVVPVETVGKPFDPL HEAIMREDSTEFEEGIILDEFRKGFLLGDRLLRP
Sbjct: 241 KQFNEILGSLGVVPVETVGKPFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLGDRLLRP 300

Query: 301 SMVKVSAGPGPEKPAEAAAPSEEHDSSENYERSNTESS 337
           SMVKVSAGPGPEKPAE AAPSEEHDSSENYERSNTESS
Sbjct: 301 SMVKVSAGPGPEKPAE-AAPSEEHDSSENYERSNTESS 337

[Close]

BLAST of Carg13330 vs. ExPASy TrEMBL
Match: A0A6J1GD85 (GrpE protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111453132 PE=3 SV=1)

HSP 1 Score: 517.7 bits (1332), Expect = 3.6e-143
Identity = 290/337 (86.05%), Postives = 306/337 (90.80%), Query Frame = 0


Query: 1   MATILRAPFFQATPPANVSTIFSSKSTLKSSSLSFRTSHSPFYCINSSKLS-RPRSIRFP 60
           MAT+LR PFFQATPPA VSTI SSKSTLK  S+SFRTSH+   CINSSK S RPRS+RFP
Sbjct: 1   MATVLRTPFFQATPPATVSTISSSKSTLKPLSVSFRTSHATISCINSSKFSLRPRSLRFP 60

Query: 61  KLGPFASSGNTEVSEVEEEVHESEAEDSSVSYTGVEDAASDSDINDGAEVNAEDSPQSVI 120
           KL  F+SSG TE+SEVEEEV ESEAEDSSVSYTGVEDAASDSDI D AEVNAED  QSVI
Sbjct: 61  KLASFSSSGETEISEVEEEVRESEAEDSSVSYTGVEDAASDSDITDDAEVNAEDVAQSVI 120

Query: 121 LAALQSYKQALADNNESQIAEIESFLKSIEDEKLAAERKLKSLTEDLSVEKDRILRISAD 180
           ++ALQSYKQALADNN +QI EIES+LKSIEDEKLA ERKL+SLTE+LSVEK RILRISAD
Sbjct: 121 ISALQSYKQALADNNGAQIVEIESYLKSIEDEKLAVERKLESLTEELSVEKVRILRISAD 180

Query: 181 FENFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK 240
           F+NFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK
Sbjct: 181 FDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK 240

Query: 241 QFNEILGSLGVVPVETVGKPFDPLFHEAIMREDSTEFEEGIILDEFRKGFLLGDRLLRPS 300
           QF EILGSLGVVPVET+GKPFDPL HEAIMREDS EFEEGIILDEFRKGFLLG+RLLRPS
Sbjct: 241 QFTEILGSLGVVPVETIGKPFDPLLHEAIMREDSAEFEEGIILDEFRKGFLLGERLLRPS 300

Query: 301 MVKVSAGPGPEKPAEAAAPSEEHDSSENYERSNTESS 337
           MVKVSAGPGPEK  EAAA SEEHDSSEN E S +ESS
Sbjct: 301 MVKVSAGPGPEKSDEAAA-SEEHDSSENSEGSESESS 336

[Close]

BLAST of Carg13330 vs. ExPASy TrEMBL
Match: A0A6J1HRX1 (GrpE protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111467228 PE=3 SV=1)

HSP 1 Score: 517.3 bits (1331), Expect = 4.8e-143
Identity = 290/337 (86.05%), Postives = 306/337 (90.80%), Query Frame = 0


Query: 1   MATILRAPFFQATPPANVSTIFSSKSTLKSSSLSFRTSHSPFYCINSSKLS-RPRSIRFP 60
           MAT+LR PFFQATPPA VSTI SSKSTLK  S+SFRTSHS   CINSSK S RPRSIRFP
Sbjct: 1   MATVLRTPFFQATPPATVSTISSSKSTLKPLSVSFRTSHSTICCINSSKFSLRPRSIRFP 60

Query: 61  KLGPFASSGNTEVSEVEEEVHESEAEDSSVSYTGVEDAASDSDINDGAEVNAEDSPQSVI 120
           KL  F+SSG TE+SEVEEEV ESEAEDSSVSYTGVEDAASDSDIND AEVNAED  QSVI
Sbjct: 61  KLASFSSSGETEISEVEEEVRESEAEDSSVSYTGVEDAASDSDINDDAEVNAEDVAQSVI 120

Query: 121 LAALQSYKQALADNNESQIAEIESFLKSIEDEKLAAERKLKSLTEDLSVEKDRILRISAD 180
           ++ALQSYKQALADNN +QI EIES+LKSIED+K A E+KL+SLTE+LS EK RILRISAD
Sbjct: 121 ISALQSYKQALADNNGAQIVEIESYLKSIEDDKFAVEKKLESLTEELSAEKVRILRISAD 180

Query: 181 FENFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK 240
           F+NFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK
Sbjct: 181 FDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK 240

Query: 241 QFNEILGSLGVVPVETVGKPFDPLFHEAIMREDSTEFEEGIILDEFRKGFLLGDRLLRPS 300
           QFNEILGSLGVVPVET+GK FDPL HEAIMREDSTEFEEGIILDEFRKGFLLG+RLLRPS
Sbjct: 241 QFNEILGSLGVVPVETIGKHFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLGERLLRPS 300

Query: 301 MVKVSAGPGPEKPAEAAAPSEEHDSSENYERSNTESS 337
           MVKVSAGPGPEK  EAAA SEEHDSSEN E S +ESS
Sbjct: 301 MVKVSAGPGPEKSDEAAA-SEEHDSSENSEGSESESS 336

[Close]

BLAST of Carg13330 vs. ExPASy TrEMBL
Match: A0A6J1DJU6 (GrpE protein homolog OS=Momordica charantia OX=3673 GN=LOC111021782 PE=3 SV=1)

HSP 1 Score: 512.3 bits (1318), Expect = 1.5e-141
Identity = 282/337 (83.68%), Postives = 307/337 (91.10%), Query Frame = 0


Query: 1   MATILRAPFFQATPPANVSTIFSSKSTLKSSSLSFRTSHSPFYCINSSK-LSRPRSIRFP 60
           MAT+LR PFFQATPPA+VS + SSKS+LK SSLSFRTSH+  YCINSS  LSRPRS+RFP
Sbjct: 1   MATVLRTPFFQATPPASVSAVSSSKSSLKPSSLSFRTSHTTIYCINSSSMLSRPRSLRFP 60

Query: 61  KLGPFASSGNTEVSEVEEEVHESEAEDSSVSYTGVEDAASDSDINDGAEVNAEDSPQSVI 120
           K   FASSG TEVSE+EEEV ESEAEDSSVSY+GVEDAASD+DI+D AEV+ ED PQSVI
Sbjct: 61  KFARFASSGETEVSEIEEEVRESEAEDSSVSYSGVEDAASDNDISDDAEVDTEDLPQSVI 120

Query: 121 LAALQSYKQALADNNESQIAEIESFLKSIEDEKLAAERKLKSLTEDLSVEKDRILRISAD 180
           ++AL+SYKQALADNN +QI EIESFLKSIEDEKLA ERKL+SLTE+L++EKDRILRISAD
Sbjct: 121 ISALESYKQALADNNGAQIVEIESFLKSIEDEKLAVERKLQSLTEELTIEKDRILRISAD 180

Query: 181 FENFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK 240
           F+NFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK
Sbjct: 181 FDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK 240

Query: 241 QFNEILGSLGVVPVETVGKPFDPLFHEAIMREDSTEFEEGIILDEFRKGFLLGDRLLRPS 300
           QF EIL SLGVVPVETVGKPFDPL HEAIMREDSTEFEEGIILDEFRKGFLLG+RLLRPS
Sbjct: 241 QFTEILASLGVVPVETVGKPFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLGERLLRPS 300

Query: 301 MVKVSAGPGPEKPAEAAAPSEEHDSSENYERSNTESS 337
           MVKVSAGPGPEK ++  AP+EE DSSE  E S +ESS
Sbjct: 301 MVKVSAGPGPEK-SDEVAPTEEQDSSEKSEGSESESS 336

[Close]

BLAST of Carg13330 vs. TAIR 10
Match: AT5G17710.1 (Co-chaperone GrpE family protein )

HSP 1 Score: 304.7 bits (779), Expect = 9.3e-83
Identity = 188/337 (55.79%), Postives = 231/337 (68.55%), Query Frame = 0


Query: 1   MATILRAPFFQATPPANVSTIFSSKSTLKSSSLSFRTSHSPFYCINSSKLSRPRSIRFP- 60
           MA +L+ P    TP    + + +     K   +SF    +    ++     R  S  +P 
Sbjct: 1   MAGLLKTPSLHLTP----TLLHAPSVPFKPFCVSFAGGRNVSVSLSRRASLRSVSSGYPL 60

Query: 61  ---KLGPFASSGNTEVSEVEEEVHESEAEDSSVSYTGVEDAASDSDINDGAEVNAEDSPQ 120
               L PFA SG  E +E E E +E E  D +V     E+A+++       E  AE+   
Sbjct: 61  RLLNLVPFA-SGEAETTETEVESNEPEETDGAVDVEN-ENASAE-------EGEAEEEEA 120

Query: 121 SVILAALQSYKQALADNNESQIAEIESFLKSIEDEKLAAERKLKSLTEDLSVEKDRILRI 180
           +VI A L+SYK+ALADNNE +IAEIE+ LKSIEDEK     K+ SL+ +LSVE+DR++RI
Sbjct: 121 AVITALLKSYKEALADNNEGKIAEIEASLKSIEDEKFLLADKVASLSNELSVERDRLIRI 180

Query: 181 SADFENFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQS 240
           SADF+NFRKRTERERL+LV NAQGEVVE LL VLDNFERA++QIKVETEGEEK+  SYQS
Sbjct: 181 SADFDNFRKRTERERLNLVSNAQGEVVENLLAVLDNFERAKSQIKVETEGEEKVTNSYQS 240

Query: 241 IYKQFNEILGSLGVVPVETVGKPFDPLFHEAIMREDSTEFEEGIILDEFRKGFLLGDRLL 300
           IYKQF EILGSLGV+ VETVGK FDP+ HEAIMREDS E+EEGI+L+E+RKGFLLG+RLL
Sbjct: 241 IYKQFVEILGSLGVIHVETVGKQFDPMLHEAIMREDSAEYEEGIVLEEYRKGFLLGERLL 300

Query: 301 RPSMVKVSAGPGPEKPAEAAAPSEEHDSSENYERSNT 334
           RPSMVKVSAGPGPEKP EA         S   E S++
Sbjct: 301 RPSMVKVSAGPGPEKPLEAEGEEATAQGSAEEESSSS 324

[Close]

BLAST of Carg13330 vs. TAIR 10
Match: AT5G17710.2 (Co-chaperone GrpE family protein )

HSP 1 Score: 302.4 bits (773), Expect = 4.6e-82
Identity = 186/337 (55.19%), Postives = 230/337 (68.25%), Query Frame = 0


Query: 1   MATILRAPFFQATPPANVSTIFSSKSTLKSSSLSFRTSHSPFYCINSSKLSRPRSIRFP- 60
           MA +L+ P    TP    + + +     K   +SF    +    ++     R  S  +P 
Sbjct: 1   MAGLLKTPSLHLTP----TLLHAPSVPFKPFCVSFAGGRNVSVSLSRRASLRSVSSGYPL 60

Query: 61  ---KLGPFASSGNTEVSEVEEEVHESEAEDSSVSYTGVEDAASDSDINDGAEVNAEDSPQ 120
               L PFA SG  E +E E E +E E +++     G  D  +++      E  AE+   
Sbjct: 61  RLLNLVPFA-SGEAETTETEVESNEPEVQETD----GAVDVENEN--ASAEEGEAEEEEA 120

Query: 121 SVILAALQSYKQALADNNESQIAEIESFLKSIEDEKLAAERKLKSLTEDLSVEKDRILRI 180
           +VI A L+SYK+ALADNNE +IAEIE+ LKSIEDEK     K+ SL+ +LSVE+DR++RI
Sbjct: 121 AVITALLKSYKEALADNNEGKIAEIEASLKSIEDEKFLLADKVASLSNELSVERDRLIRI 180

Query: 181 SADFENFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQS 240
           SADF+NFRKRTERERL+LV NAQGEVVE LL VLDNFERA++QIKVETEGEEK+  SYQS
Sbjct: 181 SADFDNFRKRTERERLNLVSNAQGEVVENLLAVLDNFERAKSQIKVETEGEEKVTNSYQS 240

Query: 241 IYKQFNEILGSLGVVPVETVGKPFDPLFHEAIMREDSTEFEEGIILDEFRKGFLLGDRLL 300
           IYKQF EILGSLGV+ VETVGK FDP+ HEAIMREDS E+EEGI+L+E+RKGFLLG+RLL
Sbjct: 241 IYKQFVEILGSLGVIHVETVGKQFDPMLHEAIMREDSAEYEEGIVLEEYRKGFLLGERLL 300

Query: 301 RPSMVKVSAGPGPEKPAEAAAPSEEHDSSENYERSNT 334
           RPSMVKVSAGPGPEKP EA         S   E S++
Sbjct: 301 RPSMVKVSAGPGPEKPLEAEGEEATAQGSAEEESSSS 326

[Close]

BLAST of Carg13330 vs. TAIR 10
Match: AT1G36390.1 (Co-chaperone GrpE family protein )

HSP 1 Score: 183.7 bits (465), Expect = 2.4e-46
Identity = 97/213 (45.54%), Postives = 150/213 (70.42%), Query Frame = 0


Query: 104 NDGAEVNAEDSPQSVILAALQSYKQALADNNESQIAEIESFLKSIEDEKLAAERKLKSLT 163
           N+  E N++   Q+ +   ++SYKQAL + +E+ + EIE+    IE EK   ++K+ SL+
Sbjct: 62  NNSEEANSKQ--QADVKTLIRSYKQALLNGDETSVTEIETMFCKIEKEKNKMDQKVLSLS 121

Query: 164 EDLSVEKDRILRISADFENFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVE 223
             ++ EK+  +R+ ADF+N RK+ +++RLS   NA+ +++++LL ++D+FE+A+ Q++V+
Sbjct: 122 MKIASEKEMKIRLQADFDNTRKKLDKDRLSTESNAKVQILKSLLPIIDSFEKAKLQVRVD 181

Query: 224 TEGEEKINQSYQSIYKQFNEILGSLGVVPVETVGKPFDPLFHEAIMREDSTEFEEGIILD 283
           T+ E+KI+ SYQ IY+QF E+L  L V  + TVGKPFDPL HEAI RE+S   + GII +
Sbjct: 182 TDKEKKIDTSYQGIYRQFVEVLRYLRVSVIATVGKPFDPLLHEAISREESEAVKAGIITE 241

Query: 284 EFRKGFLLGDRLLRPSMVKVSAGPGPEKPAEAA 317
           E  KGF+LGDR+LRP+ VKVS GP  +K   AA
Sbjct: 242 ELNKGFVLGDRVLRPAKVKVSLGPVNKKTPSAA 272

[Close]

BLAST of Carg13330 vs. TAIR 10
Match: AT1G36390.2 (Co-chaperone GrpE family protein )

HSP 1 Score: 183.7 bits (465), Expect = 2.4e-46
Identity = 97/213 (45.54%), Postives = 150/213 (70.42%), Query Frame = 0


Query: 104 NDGAEVNAEDSPQSVILAALQSYKQALADNNESQIAEIESFLKSIEDEKLAAERKLKSLT 163
           N+  E N++   Q+ +   ++SYKQAL + +E+ + EIE+    IE EK   ++K+ SL+
Sbjct: 62  NNSEEANSKQ--QADVKTLIRSYKQALLNGDETSVTEIETMFCKIEKEKNKMDQKVLSLS 121

Query: 164 EDLSVEKDRILRISADFENFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVE 223
             ++ EK+  +R+ ADF+N RK+ +++RLS   NA+ +++++LL ++D+FE+A+ Q++V+
Sbjct: 122 MKIASEKEMKIRLQADFDNTRKKLDKDRLSTESNAKVQILKSLLPIIDSFEKAKLQVRVD 181

Query: 224 TEGEEKINQSYQSIYKQFNEILGSLGVVPVETVGKPFDPLFHEAIMREDSTEFEEGIILD 283
           T+ E+KI+ SYQ IY+QF E+L  L V  + TVGKPFDPL HEAI RE+S   + GII +
Sbjct: 182 TDKEKKIDTSYQGIYRQFVEVLRYLRVSVIATVGKPFDPLLHEAISREESEAVKAGIITE 241

Query: 284 EFRKGFLLGDRLLRPSMVKVSAGPGPEKPAEAA 317
           E  KGF+LGDR+LRP+ VKVS GP  +K   AA
Sbjct: 242 ELNKGFVLGDRVLRPAKVKVSLGPVNKKTPSAA 272

The following BLAST results are available for this feature:

BLAST of Carg13330 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7027449.1	3.1e-173	100.00	grpE [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022925257.1	1.6e-172	99.70	uncharacterized protein LOC111432550 [Cucurbita moschata] >XP_022925258.1 unchar...	[more]
XP_023517558.1	4.0e-168	97.92	uncharacterized protein LOC111781285 [Cucurbita pepo subsp. pepo] >XP_023517559....	[more]
XP_022966384.1	4.4e-167	97.93	uncharacterized protein LOC111466047 [Cucurbita maxima] >XP_022966385.1 uncharac...	[more]
KAG6595450.1	1.3e-163	98.77	hypothetical protein SDJN03_12003, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Carg13330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8DJB3	1.7e-33	45.40	Protein GrpE OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=grpE PE...	[more]
Q7UA77	5.6e-32	41.42	Protein GrpE OS=Synechococcus sp. (strain WH8102) OX=84588 GN=grpE PE=3 SV=1	[more]
Q8YUA7	1.2e-31	44.38	Protein GrpE OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 G...	[more]
Q3MG83	1.2e-31	44.38	Protein GrpE OS=Trichormus variabilis (strain ATCC 29413 / PCC 7937) OX=240292 G...	[more]
B7KLH9	2.8e-31	39.11	Protein GrpE OS=Gloeothece citriformis (strain PCC 7424) OX=65393 GN=grpE PE=3 S...	[more]

BLAST of Carg13330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EBA2	7.5e-173	99.70	GrpE protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111432550 PE=3 SV=1	[more]
A0A6J1HTM7	2.1e-167	97.93	GrpE protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111466047 PE=3 SV=1	[more]
A0A6J1GD85	3.6e-143	86.05	GrpE protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111453132 PE=3 SV=1	[more]
A0A6J1HRX1	4.8e-143	86.05	GrpE protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111467228 PE=3 SV=1	[more]
A0A6J1DJU6	1.5e-141	83.68	GrpE protein homolog OS=Momordica charantia OX=3673 GN=LOC111021782 PE=3 SV=1	[more]

BLAST of Carg13330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G17710.1	9.3e-83	55.79	Co-chaperone GrpE family protein	[more]
AT5G17710.2	4.6e-82	55.19	Co-chaperone GrpE family protein	[more]
AT1G36390.1	2.4e-46	45.54	Co-chaperone GrpE family protein	[more]
AT1G36390.2	2.4e-46	45.54	Co-chaperone GrpE family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 138..172
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..112
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 315..329
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 301..336
None	No IPR available	PANTHER	PTHR21237:SF27	GRPE PROTEIN HOMOLOG	coord: 1..321
IPR000740	GrpE nucleotide exchange factor	PRINTS	PR00773	GRPEPROTEIN	coord: 202..217 score: 41.99 coord: 257..272 score: 45.51 coord: 284..303 score: 47.97 coord: 174..190 score: 51.1
IPR000740	GrpE nucleotide exchange factor	PFAM	PF01025	GrpE	coord: 150..304 e-value: 2.6E-44 score: 150.8
IPR000740	GrpE nucleotide exchange factor	PANTHER	PTHR21237	GRPE PROTEIN	coord: 1..321
IPR000740	GrpE nucleotide exchange factor	PROSITE	PS01071	GRPE	coord: 260..303
IPR000740	GrpE nucleotide exchange factor	HAMAP	MF_01151	GrpE	coord: 76..305 score: 18.066631
IPR000740	GrpE nucleotide exchange factor	CDD	cd00446	GrpE	coord: 170..303 e-value: 9.75054E-51 score: 163.446
IPR009012	GrpE nucleotide exchange factor, head	GENE3D	2.30.22.10	Head domain of nucleotide exchange factor GrpE	coord: 249..304 e-value: 1.1E-18 score: 68.9
IPR009012	GrpE nucleotide exchange factor, head	SUPERFAMILY	51064	Head domain of nucleotide exchange factor GrpE	coord: 251..306
IPR013805	GrpE nucleotide exchange factor, coiled-coil	GENE3D	3.90.20.20		coord: 131..246 e-value: 3.3E-22 score: 80.3
IPR013805	GrpE nucleotide exchange factor, coiled-coil	SUPERFAMILY	58014	Coiled-coil domain of nucleotide exchange factor GrpE	coord: 155..249

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg13330-RA	Carg13330-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
biological_process	GO:0030150	protein import into mitochondrial matrix
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0001405	PAM complex, Tim23 associated import motor
molecular_function	GO:0000774	adenyl-nucleotide exchange factor activity
molecular_function	GO:0051087	chaperone binding
molecular_function	GO:0042803	protein homodimerization activity
molecular_function	GO:0051082	unfolded protein binding