Carg13302 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg13302
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	HTH myb-type domain-containing protein
Location	Carg_Chr07: 6197512 .. 6198638 (+)
RNA-Seq Expression	Carg13302
Synteny	Carg13302

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGGGGGAAGCGACGGTGGTGCTGCAGCAGCAGCAGCCGCAGCAGAATGTTCAAACAAGAGTAGAAGTGATAGCAACAAGTCCCAAAGCGAATTGGGAAATGAAGGCAGCTCAAGCAACAGCACAATTGAAGAGAACGATGAGCGGCAAAAGAAGCCCACCGTGAGGCCCTATGTCAGATCCAAACTCCCACGACTCCGTTGGACCCCTGATCTCCACTTCCGCTTCCTTCATGCCGTCCAATCACTCGGCGGACAACAAAGTAATAATCAACTTCATCCAATTTACTCCTAATTCTTCATCATCCCATCATTTAACAAATTCTTTATTAGGATGAGCTCAATTCAAATCCATTTCAAAATTTCAAAATTTTAATTTTTAGATCTAAATTTCCATGTTTTGTTCATGATTTTTGTTGCATAGATGCTACACCCAAGTTGGTTCTTCAATTAATGAACATCAAAGGACTAAGCATCGCCCATGTCAAGAGCCATCTCCAGGTTGCTTTACACACTAACTAATCTCTCTTCCTTTCTTCAATCAATCATTGCATAAATTCATCTCAATTTTCCCTTCTGCTCTTCAGATGTATCGAAGCAAGAAGAGCAATGAAATGACAACGGTGGCAGATCAAAGGGTTCTAATGTCTCAAACTAGTGATCGCAACATATTCACTGTCAGCCAAATCCCCATGTTCCAACGCCATAACCAAACCTACCCTTCTAATATTTTTCGGTAAGAACACCTCTTAATTCATTACAATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCAAAATTCATCTCGAATTTGATCGTCGTCGTGTTAGATTCGGTAGCCATTCATGGAGTGATTACGAGAACAAAACAACACAAACCCTTTACATGGGGAAGGCCTCGGCATTGAGTGAAGCGAGATCGAGGGAATTCAGCACGAGCATGGTCGGTGAACGGAACACGAGAACGAGGAAAGGGGATGAAGAAATAGACTTGAGTTTATCGCTGAAGATTGCAGCAAGAGAGGAGATGAAGATTGAGAAGAGAAGGAGGATAGAACAAGAAGGTTTAGAAGATAGAACTGATTTGTCTCTATCTTTGTGCTCATTTCATTCAAAATCTCCATAG

mRNA sequence

ATGGAAGGGGGAAGCGACGGTGGTGCTGCAGCAGCAGCAGCCGCAGCAGAATGTTCAAACAAGAGTAGAAGTGATAGCAACAAGTCCCAAAGCGAATTGGGAAATGAAGGCAGCTCAAGCAACAGCACAATTGAAGAGAACGATGAGCGGCAAAAGAAGCCCACCGTGAGGCCCTATGTCAGATCCAAACTCCCACGACTCCGTTGGACCCCTGATCTCCACTTCCGCTTCCTTCATGCCGTCCAATCACTCGGCGGACAACAAAATGCTACACCCAAGTTGGTTCTTCAATTAATGAACATCAAAGGACTAAGCATCGCCCATGTCAAGAGCCATCTCCAGATGTATCGAAGCAAGAAGAGCAATGAAATGACAACGGTGGCAGATCAAAGGGTTCTAATGTCTCAAACTAGTGATCGCAACATATTCACTGTCAGCCAAATCCCCATGTTCCAACGCCATAACCAAACCTACCCTTCTAATATTTTTCGATTCGGTAGCCATTCATGGAGTGATTACGAGAACAAAACAACACAAACCCTTTACATGGGGAAGGCCTCGGCATTGAGTGAAGCGAGATCGAGGGAATTCAGCACGAGCATGGTCGGTGAACGGAACACGAGAACGAGGAAAGGGGATGAAGAAATAGACTTGAGTTTATCGCTGAAGATTGCAGCAAGAGAGGAGATGAAGATTGAGAAGAGAAGGAGGATAGAACAAGAAGGTTTAGAAGATAGAACTGATTTGTCTCTATCTTTGTGCTCATTTCATTCAAAATCTCCATAG

Coding sequence (CDS)

ATGGAAGGGGGAAGCGACGGTGGTGCTGCAGCAGCAGCAGCCGCAGCAGAATGTTCAAACAAGAGTAGAAGTGATAGCAACAAGTCCCAAAGCGAATTGGGAAATGAAGGCAGCTCAAGCAACAGCACAATTGAAGAGAACGATGAGCGGCAAAAGAAGCCCACCGTGAGGCCCTATGTCAGATCCAAACTCCCACGACTCCGTTGGACCCCTGATCTCCACTTCCGCTTCCTTCATGCCGTCCAATCACTCGGCGGACAACAAAATGCTACACCCAAGTTGGTTCTTCAATTAATGAACATCAAAGGACTAAGCATCGCCCATGTCAAGAGCCATCTCCAGATGTATCGAAGCAAGAAGAGCAATGAAATGACAACGGTGGCAGATCAAAGGGTTCTAATGTCTCAAACTAGTGATCGCAACATATTCACTGTCAGCCAAATCCCCATGTTCCAACGCCATAACCAAACCTACCCTTCTAATATTTTTCGATTCGGTAGCCATTCATGGAGTGATTACGAGAACAAAACAACACAAACCCTTTACATGGGGAAGGCCTCGGCATTGAGTGAAGCGAGATCGAGGGAATTCAGCACGAGCATGGTCGGTGAACGGAACACGAGAACGAGGAAAGGGGATGAAGAAATAGACTTGAGTTTATCGCTGAAGATTGCAGCAAGAGAGGAGATGAAGATTGAGAAGAGAAGGAGGATAGAACAAGAAGGTTTAGAAGATAGAACTGATTTGTCTCTATCTTTGTGCTCATTTCATTCAAAATCTCCATAG

Protein sequence

MEGGSDGGAAAAAAAAECSNKSRSDSNKSQSELGNEGSSSNSTIEENDERQKKPTVRPYVRSKLPRLRWTPDLHFRFLHAVQSLGGQQNATPKLVLQLMNIKGLSIAHVKSHLQMYRSKKSNEMTTVADQRVLMSQTSDRNIFTVSQIPMFQRHNQTYPSNIFRFGSHSWSDYENKTTQTLYMGKASALSEARSREFSTSMVGERNTRTRKGDEEIDLSLSLKIAAREEMKIEKRRRIEQEGLEDRTDLSLSLCSFHSKSP

Homology

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BLAST of Carg13302 vs. NCBI nr
Match: KAG7027421.1 (putative Myb family transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 489.6 bits (1259), Expect = 1.7e-134
Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 0


Query: 1   MEGGSDGGAAAAAAAAECSNKSRSDSNKSQSELGNEGSSSNSTIEENDERQKKPTVRPYV 60
           MEGGSDGGAAAAAAAAECSNKSRSDSNKSQSELGNEGSSSNSTIEENDERQKKPTVRPYV
Sbjct: 1   MEGGSDGGAAAAAAAAECSNKSRSDSNKSQSELGNEGSSSNSTIEENDERQKKPTVRPYV 60

Query: 61  RSKLPRLRWTPDLHFRFLHAVQSLGGQQNATPKLVLQLMNIKGLSIAHVKSHLQMYRSKK 120
           RSKLPRLRWTPDLHFRFLHAVQSLGGQQNATPKLVLQLMNIKGLSIAHVKSHLQMYRSKK
Sbjct: 61  RSKLPRLRWTPDLHFRFLHAVQSLGGQQNATPKLVLQLMNIKGLSIAHVKSHLQMYRSKK 120

Query: 121 SNEMTTVADQRVLMSQTSDRNIFTVSQIPMFQRHNQTYPSNIFRFGSHSWSDYENKTTQT 180
           SNEMTTVADQRVLMSQTSDRNIFTVSQIPMFQRHNQTYPSNIFRFGSHSWSDYENKTTQT
Sbjct: 121 SNEMTTVADQRVLMSQTSDRNIFTVSQIPMFQRHNQTYPSNIFRFGSHSWSDYENKTTQT 180

Query: 181 LYMGKASALSEARSREFSTSMVGERNTRTRKGDEEIDLSLSLKIAAREEMKIEKRRRIEQ 240
           LYMGKASALSEARSREFSTSMVGERNTRTRKGDEEIDLSLSLKIAAREEMKIEKRRRIEQ
Sbjct: 181 LYMGKASALSEARSREFSTSMVGERNTRTRKGDEEIDLSLSLKIAAREEMKIEKRRRIEQ 240

Query: 241 EGLEDRTDLSLSLCSFHSKSP 262
           EGLEDRTDLSLSLCSFHSKSP
Sbjct: 241 EGLEDRTDLSLSLCSFHSKSP 261

[Close]

BLAST of Carg13302 vs. NCBI nr
Match: XP_022931927.1 (putative Myb family transcription factor At1g14600 [Cucurbita moschata])

HSP 1 Score: 483.4 bits (1243), Expect = 1.2e-132
Identity = 261/266 (98.12%), Postives = 261/266 (98.12%), Query Frame = 0


Query: 1   MEGGSDGG-----AAAAAAAAECSNKSRSDSNKSQSELGNEGSSSNSTIEENDERQKKPT 60
           MEGGSDGG     AAAAAAAAECSNKSRSDSNKSQSELGNEGSSSNSTIEENDERQKKPT
Sbjct: 1   MEGGSDGGAAAAAAAAAAAAAECSNKSRSDSNKSQSELGNEGSSSNSTIEENDERQKKPT 60

Query: 61  VRPYVRSKLPRLRWTPDLHFRFLHAVQSLGGQQNATPKLVLQLMNIKGLSIAHVKSHLQM 120
           VRPYVRSKLPRLRWTPDLHFRFLHAVQSLGGQQNATPKLVLQLMNIKGLSIAHVKSHLQM
Sbjct: 61  VRPYVRSKLPRLRWTPDLHFRFLHAVQSLGGQQNATPKLVLQLMNIKGLSIAHVKSHLQM 120

Query: 121 YRSKKSNEMTTVADQRVLMSQTSDRNIFTVSQIPMFQRHNQTYPSNIFRFGSHSWSDYEN 180
           YRSKKSNEMTTVADQRVLMSQTSDRNIFTVSQIPMFQRHNQTYPSNIFRFGSHSWSDYEN
Sbjct: 121 YRSKKSNEMTTVADQRVLMSQTSDRNIFTVSQIPMFQRHNQTYPSNIFRFGSHSWSDYEN 180

Query: 181 KTTQTLYMGKASALSEARSREFSTSMVGERNTRTRKGDEEIDLSLSLKIAAREEMKIEKR 240
           KTTQTLYMGKASALSEARSREFSTSMVGERNTRTRKGDEEIDLSLSLKIAAREEMKIEKR
Sbjct: 181 KTTQTLYMGKASALSEARSREFSTSMVGERNTRTRKGDEEIDLSLSLKIAAREEMKIEKR 240

Query: 241 RRIEQEGLEDRTDLSLSLCSFHSKSP 262
           RRIEQEGLEDRTDLSLSLCSFHSKSP
Sbjct: 241 RRIEQEGLEDRTDLSLSLCSFHSKSP 266

[Close]

BLAST of Carg13302 vs. NCBI nr
Match: KAG6595411.1 (putative Myb family transcription factor, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 481.1 bits (1237), Expect = 6.1e-132
Identity = 259/262 (98.85%), Postives = 259/262 (98.85%), Query Frame = 0


Query: 1   MEGGSDGG-AAAAAAAAECSNKSRSDSNKSQSELGNEGSSSNSTIEENDERQKKPTVRPY 60
           MEGGSDGG AAAAAAAAECSNKSRSDSNKSQSELGNEGSSSNSTIEENDERQKKPTVRPY
Sbjct: 1   MEGGSDGGAAAAAAAAAECSNKSRSDSNKSQSELGNEGSSSNSTIEENDERQKKPTVRPY 60

Query: 61  VRSKLPRLRWTPDLHFRFLHAVQSLGGQQNATPKLVLQLMNIKGLSIAHVKSHLQMYRSK 120
           VRSKLPRLRWTPDLHFRFLHAVQSLGGQQNATPKLVLQLMNIKGLSIAHVKSHLQMYRSK
Sbjct: 61  VRSKLPRLRWTPDLHFRFLHAVQSLGGQQNATPKLVLQLMNIKGLSIAHVKSHLQMYRSK 120

Query: 121 KSNEMTTVADQRVLMSQTSDRNIFTVSQIPMFQRHNQTYPSNIFRFGSHSWSDYENKTTQ 180
           KSNEMTTVADQRVLMSQTSDRNIFTVSQIPMFQRHNQTYPSNIFRFGSHSWSDYENKTTQ
Sbjct: 121 KSNEMTTVADQRVLMSQTSDRNIFTVSQIPMFQRHNQTYPSNIFRFGSHSWSDYENKTTQ 180

Query: 181 TLYMGKASALSEARSREFSTSMVGERNTRTRKGDEEIDLSLSLKIAAREEMKIEKRRRIE 240
           TLYMGKASALSEARSREF TSMV ERNTRTRKGDEEIDLSLSLKIAAREEMKIEKRRRIE
Sbjct: 181 TLYMGKASALSEARSREFGTSMVSERNTRTRKGDEEIDLSLSLKIAAREEMKIEKRRRIE 240

Query: 241 QEGLEDRTDLSLSLCSFHSKSP 262
           QEGLEDRTDLSLSLCSFHSKSP
Sbjct: 241 QEGLEDRTDLSLSLCSFHSKSP 262

[Close]

BLAST of Carg13302 vs. NCBI nr
Match: XP_023518589.1 (putative Myb family transcription factor At1g14600 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 466.5 bits (1199), Expect = 1.5e-127
Identity = 250/261 (95.79%), Postives = 252/261 (96.55%), Query Frame = 0


Query: 1   MEGGSDGGAAAAAAAAECSNKSRSDSNKSQSELGNEGSSSNSTIEENDERQKKPTVRPYV 60
           MEGG DGG    AAAAECSNKSRSDSNKSQSELGNEGSSSNSTIEENDERQKKPTVRPYV
Sbjct: 1   MEGGRDGG----AAAAECSNKSRSDSNKSQSELGNEGSSSNSTIEENDERQKKPTVRPYV 60

Query: 61  RSKLPRLRWTPDLHFRFLHAVQSLGGQQNATPKLVLQLMNIKGLSIAHVKSHLQMYRSKK 120
           RSKLPRLRWTPDLHFRFLHAVQSLGGQQNATPKLVLQLMNIKGLSIAHVKSHLQMYRSKK
Sbjct: 61  RSKLPRLRWTPDLHFRFLHAVQSLGGQQNATPKLVLQLMNIKGLSIAHVKSHLQMYRSKK 120

Query: 121 SNEMTTVADQRVLMSQTSDRNIFTVSQIPMFQRHNQTYPSNIFRFGSHSWSDYENKTTQT 180
           SNEMTTVADQRVLMSQTSDRNIFTVSQIPMFQRHNQTYPSNIFRFGSHSWSDYENKTTQT
Sbjct: 121 SNEMTTVADQRVLMSQTSDRNIFTVSQIPMFQRHNQTYPSNIFRFGSHSWSDYENKTTQT 180

Query: 181 LYMGKASALSEARSREFSTSMVGERNTRTRKGDEEIDLSLSLKIAAREEMKIEKRRRIEQ 240
           LY GKASALSEARSREF TS VGERNTR RKG+EE+DLSLSLKIAAREEMKIEKRRRIEQ
Sbjct: 181 LYTGKASALSEARSREFGTSTVGERNTRMRKGEEELDLSLSLKIAAREEMKIEKRRRIEQ 240

Query: 241 EGLEDRTDLSLSLCSFHSKSP 262
           EGLEDRTDLSLSLCSFHSKSP
Sbjct: 241 EGLEDRTDLSLSLCSFHSKSP 257

[Close]

BLAST of Carg13302 vs. NCBI nr
Match: XP_022966642.1 (putative Myb family transcription factor At1g14600 isoform X2 [Cucurbita maxima])

HSP 1 Score: 454.5 bits (1168), Expect = 6.1e-124
Identity = 246/261 (94.25%), Postives = 250/261 (95.79%), Query Frame = 0


Query: 1   MEGGSDGGAAAAAAAAECSNKSRSDSNKSQSELGNEGSSSNSTIEENDERQKKPTVRPYV 60
           MEG SDG AAAAAAA  CSNKSRSDSNKSQSELGNEGSSSNSTIEENDE+QKKPTVRPYV
Sbjct: 1   MEGASDGAAAAAAAA--CSNKSRSDSNKSQSELGNEGSSSNSTIEENDEQQKKPTVRPYV 60

Query: 61  RSKLPRLRWTPDLHFRFLHAVQSLGGQQNATPKLVLQLMNIKGLSIAHVKSHLQMYRSKK 120
           RSKLPRLRWTPDLHFRFLHAVQSLGGQQNATPKLVLQLMNIKGLSIAHVKSHLQMYRSKK
Sbjct: 61  RSKLPRLRWTPDLHFRFLHAVQSLGGQQNATPKLVLQLMNIKGLSIAHVKSHLQMYRSKK 120

Query: 121 SNEMTTVADQRVLMSQTSDRNIFTVSQIPMFQRHNQTYPSNIFRFGSHSWSDYENKTTQT 180
           +NEMTTVADQRVLMSQTSD NIFTVSQIPMFQRHNQTYPSNIFRFGSHSWS +ENKTTQT
Sbjct: 121 TNEMTTVADQRVLMSQTSDHNIFTVSQIPMFQRHNQTYPSNIFRFGSHSWSAHENKTTQT 180

Query: 181 LYMGKASALSEARSREFSTSMVGERNTRTRKGDEEIDLSLSLKIAAREEMKIEKRRRIEQ 240
           LY GK SALSEARSREFSTS VGERNTR RKG+EEIDLSLSLKIAAREEMKIEKRRRIEQ
Sbjct: 181 LYTGKPSALSEARSREFSTSTVGERNTRMRKGEEEIDLSLSLKIAAREEMKIEKRRRIEQ 240

Query: 241 EGLEDRTDLSLSLCSFHSKSP 262
           E LEDRTDLSLSLCSFHSKSP
Sbjct: 241 EALEDRTDLSLSLCSFHSKSP 259

[Close]

BLAST of Carg13302 vs. ExPASy Swiss-Prot
Match: A3AWH5 (Myb family transcription factor MOF1 OS=Oryza sativa subsp. japonica OX=39947 GN=MOF1 PE=1 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 4.2e-19
Identity = 43/65 (66.15%), Postives = 54/65 (83.08%), Query Frame = 0


Query: 56  VRPYVRSKLPRLRWTPDLHFRFLHAVQSLGGQQNATPKLVLQLMNIKGLSIAHVKSHLQM 115
           VR Y+RSK+PRLRWT +LH  F+ A++ LGGQ  ATPKL+LQLM +KGL+I+HVKSHLQM
Sbjct: 14  VRQYIRSKVPRLRWTGELHCSFVQAIEFLGGQDKATPKLILQLMGVKGLTISHVKSHLQM 73

Query: 116 YRSKK 121
           YR  +
Sbjct: 74  YRCSR 78

[Close]

BLAST of Carg13302 vs. ExPASy Swiss-Prot
Match: Q700D9 (Putative Myb family transcription factor At1g14600 OS=Arabidopsis thaliana OX=3702 GN=At1g14600 PE=2 SV=2)

HSP 1 Score: 96.3 bits (238), Expect = 5.5e-19
Identity = 74/202 (36.63%), Postives = 101/202 (50.00%), Query Frame = 0


Query: 56  VRPYVRSKLPRLRWTPDLHFRFLHAVQSLGGQQNATPKLVLQLMNIKGLSIAHVKSHLQM 115
           VRPYVRS +PRLRWTP+LH  F+HAV  LGGQ  ATPKLVL++M++KGL+I+HVKSHLQM
Sbjct: 15  VRPYVRSPVPRLRWTPELHRSFVHAVDLLGGQYKATPKLVLKIMDVKGLTISHVKSHLQM 74

Query: 116 YRSKKSNEMTTVADQRVLMSQTSDRNIFTVSQIPMFQRHNQTYPSNIFRFGSHSWSDYEN 175
           YR  +   +T +       S +S R     ++      +   +  N    G HS+ ++  
Sbjct: 75  YRGSR---ITLLGKPEESSSPSSRRRRRQDNEEDHLHDNLSVHARNDCLLGFHSF-NFRE 134

Query: 176 KTTQTLYMGKASALSEARSREFSTSMVGERNTRTRKGDEEIDLSLSLKIAAREEMKIEKR 235
           +T+ T          +    +F   M  ER        E I       + A     I K 
Sbjct: 135 QTSAT----------DNDDDDFLNIMNMERTKTFAGNGESIKFQSHHSLEAENTKNIWKN 194

Query: 236 RRIEQEGLEDRTDLSLSLCSFH 258
              E E  E+  +LSLSL   H
Sbjct: 195 TWRENEH-EEEEELSLSLSLNH 201

[Close]

BLAST of Carg13302 vs. ExPASy Swiss-Prot
Match: A0A0P0X0C0 (Myb family transcription factor MPH1 OS=Oryza sativa subsp. japonica OX=39947 GN=MPH1 PE=2 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.2e-18
Identity = 44/77 (57.14%), Postives = 60/77 (77.92%), Query Frame = 0


Query: 56  VRPYVRSKLPRLRWTPDLHFRFLHAVQSLGGQQNATPKLVLQLMNIKGLSIAHVKSHLQM 115
           VR Y RS++PR+RWT ++H +F+ AV+ LGGQ  ATPK +LQLM +KG+SI+H+KSHLQM
Sbjct: 9   VRQYNRSEVPRMRWTEEMHRQFVEAVECLGGQDEATPKRILQLMGVKGVSISHIKSHLQM 68

Query: 116 YRSKKSNEMTTVADQRV 133
           YRS  SN    V+ Q++
Sbjct: 69  YRSGSSNSNHPVSLQKL 85

[Close]

BLAST of Carg13302 vs. ExPASy Swiss-Prot
Match: Q0J235 (Probable transcription factor RL9 OS=Oryza sativa subsp. japonica OX=39947 GN=RL9 PE=2 SV=2)

HSP 1 Score: 85.1 bits (209), Expect = 1.3e-15
Identity = 38/61 (62.30%), Postives = 50/61 (81.97%), Query Frame = 0


Query: 63  KLPRLRWTPDLHFRFLHAVQSLGGQQNATPKLVLQLMNIKGLSIAHVKSHLQMYRSKKSN 122
           + PR+RWT  LH RF+HAV+ LGG + ATPK VL+LM++K L++AHVKSHLQMYR+ KS 
Sbjct: 323 RAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKST 382

Query: 123 E 124
           +
Sbjct: 383 D 383

[Close]

BLAST of Carg13302 vs. ExPASy Swiss-Prot
Match: Q9FJV5 (Probable transcription factor KAN4 OS=Arabidopsis thaliana OX=3702 GN=KAN4 PE=1 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.7e-15
Identity = 39/70 (55.71%), Postives = 52/70 (74.29%), Query Frame = 0


Query: 63  KLPRLRWTPDLHFRFLHAVQSLGGQQNATPKLVLQLMNIKGLSIAHVKSHLQMYRSKKSN 122
           + PR+RWT  LH  F+HAVQ LGG + ATPK VL+LMN+K L++AHVKSHLQMYR+ K  
Sbjct: 104 RAPRMRWTSTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKCT 163

Query: 123 EMTTVADQRV 133
           +  +  + +V
Sbjct: 164 DKGSPGEGKV 173

[Close]

BLAST of Carg13302 vs. ExPASy TrEMBL
Match: A0A6J1EV69 (putative Myb family transcription factor At1g14600 OS=Cucurbita moschata OX=3662 GN=LOC111438202 PE=4 SV=1)

HSP 1 Score: 483.4 bits (1243), Expect = 5.9e-133
Identity = 261/266 (98.12%), Postives = 261/266 (98.12%), Query Frame = 0


Query: 1   MEGGSDGG-----AAAAAAAAECSNKSRSDSNKSQSELGNEGSSSNSTIEENDERQKKPT 60
           MEGGSDGG     AAAAAAAAECSNKSRSDSNKSQSELGNEGSSSNSTIEENDERQKKPT
Sbjct: 1   MEGGSDGGAAAAAAAAAAAAAECSNKSRSDSNKSQSELGNEGSSSNSTIEENDERQKKPT 60

Query: 61  VRPYVRSKLPRLRWTPDLHFRFLHAVQSLGGQQNATPKLVLQLMNIKGLSIAHVKSHLQM 120
           VRPYVRSKLPRLRWTPDLHFRFLHAVQSLGGQQNATPKLVLQLMNIKGLSIAHVKSHLQM
Sbjct: 61  VRPYVRSKLPRLRWTPDLHFRFLHAVQSLGGQQNATPKLVLQLMNIKGLSIAHVKSHLQM 120

Query: 121 YRSKKSNEMTTVADQRVLMSQTSDRNIFTVSQIPMFQRHNQTYPSNIFRFGSHSWSDYEN 180
           YRSKKSNEMTTVADQRVLMSQTSDRNIFTVSQIPMFQRHNQTYPSNIFRFGSHSWSDYEN
Sbjct: 121 YRSKKSNEMTTVADQRVLMSQTSDRNIFTVSQIPMFQRHNQTYPSNIFRFGSHSWSDYEN 180

Query: 181 KTTQTLYMGKASALSEARSREFSTSMVGERNTRTRKGDEEIDLSLSLKIAAREEMKIEKR 240
           KTTQTLYMGKASALSEARSREFSTSMVGERNTRTRKGDEEIDLSLSLKIAAREEMKIEKR
Sbjct: 181 KTTQTLYMGKASALSEARSREFSTSMVGERNTRTRKGDEEIDLSLSLKIAAREEMKIEKR 240

Query: 241 RRIEQEGLEDRTDLSLSLCSFHSKSP 262
           RRIEQEGLEDRTDLSLSLCSFHSKSP
Sbjct: 241 RRIEQEGLEDRTDLSLSLCSFHSKSP 266

[Close]

BLAST of Carg13302 vs. ExPASy TrEMBL
Match: A0A6J1HNJ5 (putative Myb family transcription factor At1g14600 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111466265 PE=4 SV=1)

HSP 1 Score: 454.5 bits (1168), Expect = 2.9e-124
Identity = 246/261 (94.25%), Postives = 250/261 (95.79%), Query Frame = 0


Query: 1   MEGGSDGGAAAAAAAAECSNKSRSDSNKSQSELGNEGSSSNSTIEENDERQKKPTVRPYV 60
           MEG SDG AAAAAAA  CSNKSRSDSNKSQSELGNEGSSSNSTIEENDE+QKKPTVRPYV
Sbjct: 1   MEGASDGAAAAAAAA--CSNKSRSDSNKSQSELGNEGSSSNSTIEENDEQQKKPTVRPYV 60

Query: 61  RSKLPRLRWTPDLHFRFLHAVQSLGGQQNATPKLVLQLMNIKGLSIAHVKSHLQMYRSKK 120
           RSKLPRLRWTPDLHFRFLHAVQSLGGQQNATPKLVLQLMNIKGLSIAHVKSHLQMYRSKK
Sbjct: 61  RSKLPRLRWTPDLHFRFLHAVQSLGGQQNATPKLVLQLMNIKGLSIAHVKSHLQMYRSKK 120

Query: 121 SNEMTTVADQRVLMSQTSDRNIFTVSQIPMFQRHNQTYPSNIFRFGSHSWSDYENKTTQT 180
           +NEMTTVADQRVLMSQTSD NIFTVSQIPMFQRHNQTYPSNIFRFGSHSWS +ENKTTQT
Sbjct: 121 TNEMTTVADQRVLMSQTSDHNIFTVSQIPMFQRHNQTYPSNIFRFGSHSWSAHENKTTQT 180

Query: 181 LYMGKASALSEARSREFSTSMVGERNTRTRKGDEEIDLSLSLKIAAREEMKIEKRRRIEQ 240
           LY GK SALSEARSREFSTS VGERNTR RKG+EEIDLSLSLKIAAREEMKIEKRRRIEQ
Sbjct: 181 LYTGKPSALSEARSREFSTSTVGERNTRMRKGEEEIDLSLSLKIAAREEMKIEKRRRIEQ 240

Query: 241 EGLEDRTDLSLSLCSFHSKSP 262
           E LEDRTDLSLSLCSFHSKSP
Sbjct: 241 EALEDRTDLSLSLCSFHSKSP 259

[Close]

BLAST of Carg13302 vs. ExPASy TrEMBL
Match: A0A6J1HPW1 (putative Myb family transcription factor At1g14600 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111466265 PE=4 SV=1)

HSP 1 Score: 452.6 bits (1163), Expect = 1.1e-123
Identity = 247/270 (91.48%), Postives = 251/270 (92.96%), Query Frame = 0


Query: 1   MEGGSDG---------GAAAAAAAAECSNKSRSDSNKSQSELGNEGSSSNSTIEENDERQ 60
           MEG SDG          AAAAAAAA CSNKSRSDSNKSQSELGNEGSSSNSTIEENDE+Q
Sbjct: 30  MEGASDGAAAAAAAAAAAAAAAAAAACSNKSRSDSNKSQSELGNEGSSSNSTIEENDEQQ 89

Query: 61  KKPTVRPYVRSKLPRLRWTPDLHFRFLHAVQSLGGQQNATPKLVLQLMNIKGLSIAHVKS 120
           KKPTVRPYVRSKLPRLRWTPDLHFRFLHAVQSLGGQQNATPKLVLQLMNIKGLSIAHVKS
Sbjct: 90  KKPTVRPYVRSKLPRLRWTPDLHFRFLHAVQSLGGQQNATPKLVLQLMNIKGLSIAHVKS 149

Query: 121 HLQMYRSKKSNEMTTVADQRVLMSQTSDRNIFTVSQIPMFQRHNQTYPSNIFRFGSHSWS 180
           HLQMYRSKK+NEMTTVADQRVLMSQTSD NIFTVSQIPMFQRHNQTYPSNIFRFGSHSWS
Sbjct: 150 HLQMYRSKKTNEMTTVADQRVLMSQTSDHNIFTVSQIPMFQRHNQTYPSNIFRFGSHSWS 209

Query: 181 DYENKTTQTLYMGKASALSEARSREFSTSMVGERNTRTRKGDEEIDLSLSLKIAAREEMK 240
            +ENKTTQTLY GK SALSEARSREFSTS VGERNTR RKG+EEIDLSLSLKIAAREEMK
Sbjct: 210 AHENKTTQTLYTGKPSALSEARSREFSTSTVGERNTRMRKGEEEIDLSLSLKIAAREEMK 269

Query: 241 IEKRRRIEQEGLEDRTDLSLSLCSFHSKSP 262
           IEKRRRIEQE LEDRTDLSLSLCSFHSKSP
Sbjct: 270 IEKRRRIEQEALEDRTDLSLSLCSFHSKSP 299

[Close]

BLAST of Carg13302 vs. ExPASy TrEMBL
Match: A0A6J1CR72 (uncharacterized protein LOC111013845 OS=Momordica charantia OX=3673 GN=LOC111013845 PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 7.9e-77
Identity = 186/282 (65.96%), Postives = 206/282 (73.05%), Query Frame = 0


Query: 1   MEGGSDGGAAAAAAAAECSNKSRSDSNK----SQSELGNEGSSSNSTIEEN---DERQK- 60
           ME GSDG      AA ECSN+SRS+ ++    +Q ELGNEGSSSNSTIEEN   D  QK 
Sbjct: 1   MEAGSDG------AAVECSNRSRSEDDEKNCNNQRELGNEGSSSNSTIEENNTHDHNQKN 60

Query: 61  KPTVRPYVRSKLPRLRWTPDLHFRFLHAVQSLGGQQNATPKLVLQLMNIKGLSIAHVKSH 120
           KP+VRPYVRSKLPRLRWTPDLH RF+HAV+ LGGQ+NATPKLVLQLMNIKGL+IAHVKSH
Sbjct: 61  KPSVRPYVRSKLPRLRWTPDLHHRFVHAVERLGGQENATPKLVLQLMNIKGLNIAHVKSH 120

Query: 121 LQMYRSKKSNEMTTVADQRVLMSQTSDRNIFTVSQIPMFQRHNQTYPSNIFRFGSHSWSD 180
           LQMYRSKK NE   VADQR++M++T DRNIFTVSQIPMFQR+NQTYPSNIFRFG  SWS 
Sbjct: 121 LQMYRSKKINEHGQVADQRLVMAETGDRNIFTVSQIPMFQRYNQTYPSNIFRFGGSSWSA 180

Query: 181 YENKTTQTLYMGKASALSEARSREFSTSMVGE----RNTRTRK-------GDEEIDLSLS 240
           YEN         KASA+ + RS  F  S  G       T TRK        D EIDLSLS
Sbjct: 181 YEN---------KASAVPQXRSSLFGGSNAGSFSEXNTTXTRKTTRDLKAPDGEIDLSLS 240

Query: 241 LKIAAREEMKIEKRRRIEQEG--LEDRTDLSLSLCSFHSKSP 262
           LKIAAREE    KR RIE+E    E RTDL LSLCS++S SP
Sbjct: 241 LKIAAREEKIDHKRMRIEEEEKVAESRTDLCLSLCSYYSISP 267

[Close]

BLAST of Carg13302 vs. ExPASy TrEMBL
Match: A0A6J1ITL0 (myb family transcription factor PHL11 OS=Cucurbita maxima OX=3661 GN=LOC111478289 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 3.6e-74
Identity = 180/299 (60.20%), Postives = 209/299 (69.90%), Query Frame = 0


Query: 1   MEGGSDGGAAAAAA---AAECSNKSRSDSNKSQSELGNEGSSSNSTIEENDERQKKPTVR 60
           ME GSDGG AAAAA   AAECSN        S+S+LGNEGSS+NSTIEEND+ QKKP+VR
Sbjct: 1   MEAGSDGGGAAAAAAEVAAECSN--------SESDLGNEGSSNNSTIEENDQ-QKKPSVR 60

Query: 61  PYVRSKLPRLRWTPDLHFRFLHAVQSLGGQQNATPKLVLQLMNIKGLSIAHVKSHLQMYR 120
           PYVRSKLPRLRWT DLH RF+HAV+ LGGQ+NATPKLVLQLMNIKGL+IAHVKSHLQMYR
Sbjct: 61  PYVRSKLPRLRWTSDLHSRFVHAVERLGGQENATPKLVLQLMNIKGLNIAHVKSHLQMYR 120

Query: 121 SKKSNEMTTVADQRVLMSQT-SDRNIFTVSQIPMFQRHNQTYPSNIFRFGSHSWSDYENK 180
           SK +NE + V DQRVLM+++  D NIFTVSQIPMFQR NQ+Y SN+FRFG  +W+ Y+ K
Sbjct: 121 SKNTNESSQVMDQRVLMNESCGDHNIFTVSQIPMFQRFNQSYASNVFRFGGSTWNAYDTK 180

Query: 181 TTQTLYMGKASALSEARSREF--------STSMVGERNTRTRKGDE-------------- 240
           T QT Y  KA +     S+          + S +GE+NT T K +E              
Sbjct: 181 TIQTPYTEKARSRLFGSSKSATPGTNICKNRSSIGEQNTTTSKREEMREKEDPCRDIKIT 240

Query: 241 --------EIDLSLSLKIAAREEMKIEKRRRI----EQEGLEDRTDLSLSLCSFHSKSP 262
                   EIDLSLSLKIA  E MKI+KRRR     EQE  E RTDL+LSLC ++S SP
Sbjct: 241 EKRKTPDGEIDLSLSLKIAPTEGMKIDKRRRTREEHEQEHEERRTDLTLSLCPYYSTSP 290

[Close]

BLAST of Carg13302 vs. TAIR 10
Match: AT2G38300.1 (myb-like HTH transcriptional regulator family protein )

HSP 1 Score: 152.9 bits (385), Expect = 3.5e-37
Identity = 86/151 (56.95%), Postives = 111/151 (73.51%), Query Frame = 0


Query: 19  SNKSRSDSNKSQSELGNEGS-SSNSTIEENDERQKKPTVRPYVRSKLPRLRWTPDLHFRF 78
           +N+   +  + + E G E   SSNST+EE+D   KK  VRPYVRSK+PRLRWTPDLH RF
Sbjct: 11  TNREEEEEEEEEEEEGEESKVSSNSTVEESD---KKTKVRPYVRSKVPRLRWTPDLHLRF 70

Query: 79  LHAVQSLGGQQNATPKLVLQLMNIKGLSIAHVKSHLQMYRSKKSNEM-TTVADQRVLMSQ 138
           + AV+ LGGQ+ ATPKLV Q+MNIKGLSIAHVKSHLQMYRSKK ++    +A  + L   
Sbjct: 71  VRAVERLGGQERATPKLVRQMMNIKGLSIAHVKSHLQMYRSKKIDDQGQAIAGHKHLFET 130

Query: 139 TSDRNIFTVSQIPMFQRHNQTYPSNIFRFGS 168
           ++DRNI+ +SQ+PMF+ +N  + S  FR+GS
Sbjct: 131 STDRNIYKLSQLPMFRGYNHNHDSP-FRYGS 157

[Close]

BLAST of Carg13302 vs. TAIR 10
Match: AT2G40260.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 127.5 bits (319), Expect = 1.6e-29
Identity = 82/178 (46.07%), Postives = 110/178 (61.80%), Query Frame = 0


Query: 34  GNEGSSSNSTIEE-----NDERQKK-PTVRPYVRSKLPRLRWTPDLHFRFLHAVQSLGGQ 93
           G++  SSNS  EE     +D+ +K   +VRPY RSK PRLRWTP+LH  FL AV+ LGG 
Sbjct: 46  GDQSPSSNSYEEESGSHHHDQNKKNGGSVRPYNRSKTPRLRWTPELHICFLQAVERLGGP 105

Query: 94  QNATPKLVLQLMNIKGLSIAHVKSHLQMYRSKKSNEMTTVADQRVLMSQTSDRNIFTVSQ 153
             ATPKLVLQLMN+KGLSIAHVKSHLQMYRSKK++E     DQ       +    + +SQ
Sbjct: 106 DRATPKLVLQLMNVKGLSIAHVKSHLQMYRSKKTDE-PNEGDQGFSFEHGAGYT-YNLSQ 165

Query: 154 IPMFQRHNQTYPSNIFRFGSHSWSDYENKTTQTLYMGKASALSEARSREFSTSMVGER 206
           +PM Q  +Q  PS+   +G  SW+D+  +  ++ + G  +  +    +   +S  GER
Sbjct: 166 LPMLQSFDQR-PSSSLGYGGGSWTDHRRQIYRSPWRGLTTRENTRTRQTMFSSQPGER 220

[Close]

BLAST of Carg13302 vs. TAIR 10
Match: AT2G02060.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 98.2 bits (243), Expect = 1.0e-20
Identity = 74/208 (35.58%), Postives = 109/208 (52.40%), Query Frame = 0


Query: 37  GSSSNSTIEENDERQKKPTVRPYVRSKLPRLRWTPDLHFRFLHAVQSLGGQQNATPKLVL 96
           G SS      +    K   VRPYVRS +PRLRWTPDLH  F+HAV+ LGGQ  ATPKLVL
Sbjct: 2   GKSSGRNGNGSFNGNKFHGVRPYVRSPVPRLRWTPDLHRCFVHAVEILGGQHRATPKLVL 61

Query: 97  QLMNIKGLSIAHVKSHLQMYRS------KKSNEMTTVADQRVLMSQTSDRNIFTVSQIPM 156
           ++M++KGL+I+HVKSHLQMYR       +K  E ++ + +R    Q S+ + +    + +
Sbjct: 62  KMMDVKGLTISHVKSHLQMYRGGSKLTLEKPEESSSSSIRR---RQDSEEDYYLHDNLSL 121

Query: 157 FQRHNQTYPSNIFRFGSHS-------WSDYENKTTQT---------LYMGKASALSEARS 216
             R++     + F   SHS           E +T+++         L++ K +  +   S
Sbjct: 122 HTRNDCLLGFHSFPLSSHSSFRGGGGGRTKEQQTSESGGYDDDADFLHIKKMNDTTTFLS 181

Query: 217 REFSTSMVGERNTRTRKGDEEIDLSLSL 223
             F       R     + +E++ LSLSL
Sbjct: 182 HHFPKGTEEWREQEHEEEEEDLSLSLSL 206

[Close]

BLAST of Carg13302 vs. TAIR 10
Match: AT2G42660.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 96.7 bits (239), Expect = 3.0e-20
Identity = 93/270 (34.44%), Postives = 129/270 (47.78%), Query Frame = 0


Query: 10  AAAAAAAECSNKSRSDSNKSQS-ELGNEGSSSNSTIEENDERQKKPTVRPYVRSKLPRLR 69
           A  ++  +CS  +  D N+ ++ E  NE  SS       DE Q    VR Y+RS +PRLR
Sbjct: 2   AGRSSPGKCS--TWLDLNREETVEKNNEEESS-----VEDEDQITNNVRQYIRSNMPRLR 61

Query: 70  WTPDLHFRFLHAVQSLGGQQNATPKLVLQLMNIKGLSIAHVKSHLQMYRSKKSNEMTT-- 129
           WTPDLH  F+ AVQ LGG   ATPKLVL++MN+KGLSIAHVKSHLQMYRSKK    +   
Sbjct: 62  WTPDLHLSFVRAVQRLGGPDRATPKLVLEMMNLKGLSIAHVKSHLQMYRSKKLEPSSRPG 121

Query: 130 ----VADQRVLMSQTSD---------RNIFTVSQIPMFQRHNQTYPSNI---FRFGSHSW 189
               ++ QR  +    D         R+ +    +P    +     +N+   F     SW
Sbjct: 122 FGAFMSGQRSYLMDMIDSRCIPHSDLRHAYNSKTVPSRVLNQDAVVTNLGGNFLMRPSSW 181

Query: 190 SDYENKTTQTLYMGKASALSEARSREFSTSMVGERNTRTRKGDEEIDLSLSLKIAAREEM 249
                +  +     K   L E R          ++N   R  DEE+     LK  +   +
Sbjct: 182 FSGLCRNDRDSTENKTLPLLEIR----------KKNNEKRVRDEEVSSVKRLKSMSGGGI 241

Query: 250 KIEKRRRIEQEGLED-RTDLSLSLCSFHSK 260
           ++ +     Q+  +D  T LSLSL S  S+
Sbjct: 242 QLPEFGNCRQKPTDDINTMLSLSLLSTSSE 254

[Close]

BLAST of Carg13302 vs. TAIR 10
Match: AT1G14600.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 96.3 bits (238), Expect = 3.9e-20
Identity = 74/202 (36.63%), Postives = 101/202 (50.00%), Query Frame = 0


Query: 56  VRPYVRSKLPRLRWTPDLHFRFLHAVQSLGGQQNATPKLVLQLMNIKGLSIAHVKSHLQM 115
           VRPYVRS +PRLRWTP+LH  F+HAV  LGGQ  ATPKLVL++M++KGL+I+HVKSHLQM
Sbjct: 15  VRPYVRSPVPRLRWTPELHRSFVHAVDLLGGQYKATPKLVLKIMDVKGLTISHVKSHLQM 74

Query: 116 YRSKKSNEMTTVADQRVLMSQTSDRNIFTVSQIPMFQRHNQTYPSNIFRFGSHSWSDYEN 175
           YR  +   +T +       S +S R     ++      +   +  N    G HS+ ++  
Sbjct: 75  YRGSR---ITLLGKPEESSSPSSRRRRRQDNEEDHLHDNLSVHARNDCLLGFHSF-NFRE 134

Query: 176 KTTQTLYMGKASALSEARSREFSTSMVGERNTRTRKGDEEIDLSLSLKIAAREEMKIEKR 235
           +T+ T          +    +F   M  ER        E I       + A     I K 
Sbjct: 135 QTSAT----------DNDDDDFLNIMNMERTKTFAGNGESIKFQSHHSLEAENTKNIWKN 194

Query: 236 RRIEQEGLEDRTDLSLSLCSFH 258
              E E  E+  +LSLSL   H
Sbjct: 195 TWRENEH-EEEEELSLSLSLNH 201

The following BLAST results are available for this feature:

BLAST of Carg13302 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7027421.1	1.7e-134	100.00	putative Myb family transcription factor, partial [Cucurbita argyrosperma subsp....	[more]
XP_022931927.1	1.2e-132	98.12	putative Myb family transcription factor At1g14600 [Cucurbita moschata]	[more]
KAG6595411.1	6.1e-132	98.85	putative Myb family transcription factor, partial [Cucurbita argyrosperma subsp....	[more]
XP_023518589.1	1.5e-127	95.79	putative Myb family transcription factor At1g14600 [Cucurbita pepo subsp. pepo]	[more]
XP_022966642.1	6.1e-124	94.25	putative Myb family transcription factor At1g14600 isoform X2 [Cucurbita maxima]	[more]

BLAST of Carg13302 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A3AWH5	4.2e-19	66.15	Myb family transcription factor MOF1 OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]
Q700D9	5.5e-19	36.63	Putative Myb family transcription factor At1g14600 OS=Arabidopsis thaliana OX=37...	[more]
A0A0P0X0C0	1.2e-18	57.14	Myb family transcription factor MPH1 OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]
Q0J235	1.3e-15	62.30	Probable transcription factor RL9 OS=Oryza sativa subsp. japonica OX=39947 GN=RL...	[more]
Q9FJV5	1.7e-15	55.71	Probable transcription factor KAN4 OS=Arabidopsis thaliana OX=3702 GN=KAN4 PE=1 ...	[more]

BLAST of Carg13302 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EV69	5.9e-133	98.12	putative Myb family transcription factor At1g14600 OS=Cucurbita moschata OX=3662...	[more]
A0A6J1HNJ5	2.9e-124	94.25	putative Myb family transcription factor At1g14600 isoform X2 OS=Cucurbita maxim...	[more]
A0A6J1HPW1	1.1e-123	91.48	putative Myb family transcription factor At1g14600 isoform X1 OS=Cucurbita maxim...	[more]
A0A6J1CR72	7.9e-77	65.96	uncharacterized protein LOC111013845 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A6J1ITL0	3.6e-74	60.20	myb family transcription factor PHL11 OS=Cucurbita maxima OX=3661 GN=LOC11147828...	[more]

BLAST of Carg13302 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G38300.1	3.5e-37	56.95	myb-like HTH transcriptional regulator family protein	[more]
AT2G40260.1	1.6e-29	46.07	Homeodomain-like superfamily protein	[more]
AT2G02060.1	1.0e-20	35.58	Homeodomain-like superfamily protein	[more]
AT2G42660.1	3.0e-20	34.44	Homeodomain-like superfamily protein	[more]
AT1G14600.1	3.9e-20	36.63	Homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 67..117 e-value: 4.9E-7 score: 29.9
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 61..121 score: 12.299893
None	No IPR available	GENE3D	1.10.10.60		coord: 64..121 e-value: 2.4E-25 score: 90.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..42
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..59
None	No IPR available	PANTHER	PTHR31314:SF105	SUBFAMILY NOT NAMED	coord: 13..185
IPR006447	Myb domain, plants	TIGRFAM	TIGR01557	TIGR01557	coord: 65..120 e-value: 3.6E-22 score: 76.4
IPR044848	PHR1-like	PANTHER	PTHR31314	MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE	coord: 13..185
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 64..122

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg13302-RA	Carg13302-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity