Carg13197 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg13197
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	COBRA-like protein
Location	Carg_Chr04: 2888909 .. 2890918 (-)
RNA-Seq Expression	Carg13197
Synteny	Carg13197

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATTCATCCGTTCATCCATTCATCCGTTCATCCATTCATCACTCCAATGGCATGCATTCAATCCCCATTATGCATTCTTCTTCTTCATCTCCTTCGTTTCCCCTTTTCGATCTCAAACGTTTCACATTCAAACCACAAAATCCCCAGCCGCCTCCATTTCCTACAGTTTCCAAACTCAGATTTCATTGAAGATCTCCCACTGGCTCTCTATTTGGGGTTTTGAATATCAATCTTGTTTAGGGTATGGAGAATCCGTTCTTTTCCGTTTTCCAAACAAACCCATGTTTGTTTCTGGATCAAAGATCAAATTTCATTGCCTGTCTTTTGATCTTCTTCTCTCTCACCTGCTCCTTCTCGCCCTCCTGTAAGTATTTTCCTCTTCTTTGTATGTTTTGTTTGTGTTCTGTTTCATTTGAACGAAGGGTTCTCTTGTGAAGGAATAGAAGAAATTTAATATAAACCTTATAGATTGAAATACAGATGAATATGATTCCTTGGACCCTTATGCCAACCTTACTATCACATGGGATTTCTTGGTGGAGAATGGAGATACTTTTGATGTAAGTATCACTGTTCTGTTCCTGGTTTTTCTGCTCAATTTTTAGTTTATCCCTGTTATCATCTATGATATTCGATGAACTTAAGAATGTTTATAAAAGAGCCTTGTGTTAGAATGTTGTTGTTCTGTCTTATCTTAAGATGATCTATGATTGAGTGGATCCATGAATTGTTGCTCAGTATCGGCTGCAAATGGATAGCTATAAACGAGTTTGAGAAATAGTTTATCTAATAGATATTAGACATACATATCTCCAATCTTTTGGGATCCCACATCAATTGGAGGAGGGAACATAACATACTTATAAGGATGTGAAAAACCTCTTCCTAACAGACGCATTTTAGAAATCTTGAGAGAAAGTCTAAAGAGGACAGTATCTACTAGCGGAGGGCTTGAATTGTTACAAATATACTATACATACTTTAGTCGTATGTTTTCCTATCTAATGGAAAGGTTTTCTTGATCTAATGTATTTAGCTTAGGAAGGTTGTTCCTGTAAGCAATGTCATATCGTTTTTTCGTTGTAAGATAATGTCGTTTCAAACTCATTGAACTATCGAGTCTTGGGAGCTCATTCAACTACCTACAACTTCTGCACCTCTCGTTTTTGTTCAAAATCAATTCATTATGTTAAACGTTACAGGTGAGAGTTTCGTTATACAATTTCCAACTGTTTCGTCATGTGGAACTTCCTGGTTGGAAACTTGGCTGGTCATGGAAAGGTGATGAGGTTATATGGAGTATGTGGGGGGCAGAGGCTACTCAGCAAGGAAATTGCTCCAAATACATAGGCAAGGAGCTTCCTCATTGTTGTGAGAAGAAGCCTGTGATAGTTGATCTTATGCCTGGAGCTCCTTATAAGTTGCAGGTGGCCAATTGTTGTAAAGGAGGTGTGCTATCTTCCATGAGACAAGACCCTGCAAACTATGGAGCTGCCTTCCAAATGAATATCGGGAAGTCTGCTGGGAAGGGTGTAGATAGCAAAATGCCTGCAAATTTCACTCTGGGGCTTCCTGGCTATACTTGTAGTGACCCATTTCAAGTCTCTCCAACCAAGTTCAGTAAGGATGGCGGTCGTCGGTGGACACAAGTTCTAGGTAAGTACTTGATGAATGGTTAACTTAAAGGTCACTTTTAGATTGAGTTGAGGTGTGGATATCTCTGTTGGTTCTGCTGAAATCATGGTTGAGATTGGTCTTTTTGTGTTAGCTTTATGAGTAGAAAACAGCTGCAATGTCGTAGCTTAACCGAACTCCCTCTCTGAGATCTGTATATTATTTCTGATTGTAGAAACATGGAACGTGACATGTGTTTACTCGCAATTCCGATCATCACCATCTCCGGGGTGCTGTGTTTCATTGTCGTCCTTCTATAACAGCACCATTGTTCCTTGCCCTCAGTGCAGCTGTGGCTGCCAAGGGCTAGAGGGAACGAAATGCATTGAGTAA

mRNA sequence

ATGCATTCATCCGTTCATCCATTCATCCGTTCATCCATTCATCACTCCAATGGCATGCATTCAATCCCCATTATGCATTCTTCTTCTTCATCTCCTTCGTTTCCCCTTTTCGATCTCAAACGTTTCACATTCAAACCACAAAATCCCCAGCCGCCTCCATTTCCTACAGTGAGAGTTTCGTTATACAATTTCCAACTGTTTCGTCATGTGGAACTTCCTGGTTGGAAACTTGGCTGGTCATGGAAAGGTGATGAGGTTATATGGAGTATGTGGGGGGCAGAGGCTACTCAGCAAGGAAATTGCTCCAAATACATAGGCAAGGAGCTTCCTCATTGTTGTGAGAAGAAGCCTGTGATAGTTGATCTTATGCCTGGAGCTCCTTATAAGTTGCAGGTGGCCAATTGTTGTAAAGGAGGTGTGCTATCTTCCATGAGACAAGACCCTGCAAACTATGGAGCTGCCTTCCAAATGAATATCGGGAAGTCTGCTGGGAAGGGTGTAGATAGCAAAATGCCTGCAAATTTCACTCTGGGGCTTCCTGGCTATACTTGTAGTGACCCATTTCAAGTCTCTCCAACCAAGTTCAGTAAGGATGGCGGTCGTCGGTGGACACAAGTTCTAGAAACATGGAACGTGACATGTGTTTACTCGCAATTCCGATCATCACCATCTCCGGGGTGCTGTGTTTCATTGTCGTCCTTCTATAACAGCACCATTGTTCCTTGCCCTCAGTGCAGCTGTGGCTGCCAAGGGCTAGAGGGAACGAAATGCATTGAGTAA

Coding sequence (CDS)

ATGCATTCATCCGTTCATCCATTCATCCGTTCATCCATTCATCACTCCAATGGCATGCATTCAATCCCCATTATGCATTCTTCTTCTTCATCTCCTTCGTTTCCCCTTTTCGATCTCAAACGTTTCACATTCAAACCACAAAATCCCCAGCCGCCTCCATTTCCTACAGTGAGAGTTTCGTTATACAATTTCCAACTGTTTCGTCATGTGGAACTTCCTGGTTGGAAACTTGGCTGGTCATGGAAAGGTGATGAGGTTATATGGAGTATGTGGGGGGCAGAGGCTACTCAGCAAGGAAATTGCTCCAAATACATAGGCAAGGAGCTTCCTCATTGTTGTGAGAAGAAGCCTGTGATAGTTGATCTTATGCCTGGAGCTCCTTATAAGTTGCAGGTGGCCAATTGTTGTAAAGGAGGTGTGCTATCTTCCATGAGACAAGACCCTGCAAACTATGGAGCTGCCTTCCAAATGAATATCGGGAAGTCTGCTGGGAAGGGTGTAGATAGCAAAATGCCTGCAAATTTCACTCTGGGGCTTCCTGGCTATACTTGTAGTGACCCATTTCAAGTCTCTCCAACCAAGTTCAGTAAGGATGGCGGTCGTCGGTGGACACAAGTTCTAGAAACATGGAACGTGACATGTGTTTACTCGCAATTCCGATCATCACCATCTCCGGGGTGCTGTGTTTCATTGTCGTCCTTCTATAACAGCACCATTGTTCCTTGCCCTCAGTGCAGCTGTGGCTGCCAAGGGCTAGAGGGAACGAAATGCATTGAGTAA

Protein sequence

MHSSVHPFIRSSIHHSNGMHSIPIMHSSSSSPSFPLFDLKRFTFKPQNPQPPPFPTVRVSLYNFQLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGKELPHCCEKKPVIVDLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGKSAGKGVDSKMPANFTLGLPGYTCSDPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSPSPGCCVSLSSFYNSTIVPCPQCSCGCQGLEGTKCIE

Homology

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BLAST of Carg13197 vs. NCBI nr
Match: KAG7031033.1 (COBRA-like protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 559.7 bits (1441), Expect = 1.3e-155
Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 0


Query: 1   MHSSVHPFIRSSIHHSNGMHSIPIMHSSSSSPSFPLFDLKRFTFKPQNPQPPPFPTVRVS 60
           MHSSVHPFIRSSIHHSNGMHSIPIMHSSSSSPSFPLFDLKRFTFKPQNPQPPPFPTVRVS
Sbjct: 1   MHSSVHPFIRSSIHHSNGMHSIPIMHSSSSSPSFPLFDLKRFTFKPQNPQPPPFPTVRVS 60

Query: 61  LYNFQLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGKELPHCCEKKPVIV 120
           LYNFQLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGKELPHCCEKKPVIV
Sbjct: 61  LYNFQLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGKELPHCCEKKPVIV 120

Query: 121 DLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGKSAGKGVDSKMPANFTLGLP 180
           DLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGKSAGKGVDSKMPANFTLGLP
Sbjct: 121 DLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGKSAGKGVDSKMPANFTLGLP 180

Query: 181 GYTCSDPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSPSPGCCVSLSSFYNSTIV 240
           GYTCSDPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSPSPGCCVSLSSFYNSTIV
Sbjct: 181 GYTCSDPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSPSPGCCVSLSSFYNSTIV 240

Query: 241 PCPQCSCGCQGLEGTKCIE 260
           PCPQCSCGCQGLEGTKCIE
Sbjct: 241 PCPQCSCGCQGLEGTKCIE 259

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BLAST of Carg13197 vs. NCBI nr
Match: KAG6600373.1 (COBRA-like protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 446.8 bits (1148), Expect = 1.3e-121
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0


Query: 57  VRVSLYNFQLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGKELPHCCEKK 116
           VRVSLYNFQLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGKELPHCCEKK
Sbjct: 8   VRVSLYNFQLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGKELPHCCEKK 67

Query: 117 PVIVDLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGKSAGKGVDSKMPANFT 176
           PVIVDLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGKSAGKGVDSKMPANFT
Sbjct: 68  PVIVDLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGKSAGKGVDSKMPANFT 127

Query: 177 LGLPGYTCSDPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSPSPGCCVSLSSFYN 236
           LGLPGYTCSDPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSPSPGCCVSLSSFYN
Sbjct: 128 LGLPGYTCSDPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSPSPGCCVSLSSFYN 187

Query: 237 STIVPCPQCSCGCQGLEGTKCIE 260
           STIVPCPQCSCGCQGLEGTKCIE
Sbjct: 188 STIVPCPQCSCGCQGLEGTKCIE 210

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BLAST of Carg13197 vs. NCBI nr
Match: XP_022942251.1 (COBRA-like protein 6 [Cucurbita moschata])

HSP 1 Score: 443.4 bits (1139), Expect = 1.4e-120
Identity = 199/203 (98.03%), Postives = 203/203 (100.00%), Query Frame = 0


Query: 57  VRVSLYNFQLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGKELPHCCEKK 116
           VRVSLYNFQLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGKELPHCCEKK
Sbjct: 68  VRVSLYNFQLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGKELPHCCEKK 127

Query: 117 PVIVDLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGKSAGKGVDSKMPANFT 176
           PVIVDLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGKSAGKGVDSKMPANFT
Sbjct: 128 PVIVDLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGKSAGKGVDSKMPANFT 187

Query: 177 LGLPGYTCSDPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSPSPGCCVSLSSFYN 236
           LGLPGYTCSDPFQVSPTKFSKDGGRRWTQVLETWN+TCVYSQFRSSP+PGCCVSLSSFYN
Sbjct: 188 LGLPGYTCSDPFQVSPTKFSKDGGRRWTQVLETWNMTCVYSQFRSSPAPGCCVSLSSFYN 247

Query: 237 STIVPCPQCSCGCQGLEGTKCIE 260
           STIVPCPQCSCGCQG+EGTKC+E
Sbjct: 248 STIVPCPQCSCGCQGIEGTKCVE 270

[Close]

BLAST of Carg13197 vs. NCBI nr
Match: XP_023533604.1 (COBRA-like protein 6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 442.2 bits (1136), Expect = 3.1e-120
Identity = 198/203 (97.54%), Postives = 203/203 (100.00%), Query Frame = 0


Query: 57  VRVSLYNFQLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGKELPHCCEKK 116
           VRVSLYN+QLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGKELPHCCEKK
Sbjct: 68  VRVSLYNYQLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGKELPHCCEKK 127

Query: 117 PVIVDLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGKSAGKGVDSKMPANFT 176
           PVIVDLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGKSAGKGVDSKMPANFT
Sbjct: 128 PVIVDLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGKSAGKGVDSKMPANFT 187

Query: 177 LGLPGYTCSDPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSPSPGCCVSLSSFYN 236
           LGLPGYTCSDPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSP+PGCCVSLSSFYN
Sbjct: 188 LGLPGYTCSDPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSPAPGCCVSLSSFYN 247

Query: 237 STIVPCPQCSCGCQGLEGTKCIE 260
           STI+PCP+CSCGCQGLEGTKC+E
Sbjct: 248 STIIPCPRCSCGCQGLEGTKCVE 270

[Close]

BLAST of Carg13197 vs. NCBI nr
Match: XP_022980772.1 (COBRA-like protein 6 [Cucurbita maxima])

HSP 1 Score: 441.0 bits (1133), Expect = 6.9e-120
Identity = 199/203 (98.03%), Postives = 202/203 (99.51%), Query Frame = 0


Query: 57  VRVSLYNFQLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGKELPHCCEKK 116
           VRVSLYNFQLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGKELPHCCEKK
Sbjct: 68  VRVSLYNFQLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGKELPHCCEKK 127

Query: 117 PVIVDLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGKSAGKGVDSKMPANFT 176
           PVIVDLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGKSAGK VDSKMPANFT
Sbjct: 128 PVIVDLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGKSAGKVVDSKMPANFT 187

Query: 177 LGLPGYTCSDPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSPSPGCCVSLSSFYN 236
           LGLPGYTCSDPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSP+PGCCVSLSSFYN
Sbjct: 188 LGLPGYTCSDPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSPAPGCCVSLSSFYN 247

Query: 237 STIVPCPQCSCGCQGLEGTKCIE 260
           STIVPCPQCSCGCQG+EGTKC+E
Sbjct: 248 STIVPCPQCSCGCQGIEGTKCVE 270

[Close]

BLAST of Carg13197 vs. ExPASy Swiss-Prot
Match: O04500 (COBRA-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=COBL6 PE=2 SV=2)

HSP 1 Score: 263.5 bits (672), Expect = 2.6e-69
Identity = 119/194 (61.34%), Postives = 140/194 (72.16%), Query Frame = 0


Query: 57  VRVSLYNFQLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGK-ELPHCCEK 116
           V+V+L N Q +RHVE PGWKL W W   EVIW M GAE T+QGNCS +     LPHCC +
Sbjct: 61  VQVTLENMQEYRHVEKPGWKLSWHWLNQEVIWDMKGAETTEQGNCSAFASSGNLPHCCLE 120

Query: 117 KPVIVDLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGKSAGKGVDSKMPANF 176
           +P IVDL+PGA   +QVANCC+GGVL+SM QD AN+ +AF M +G S     +  MP+NF
Sbjct: 121 RPTIVDLLPGASLNVQVANCCRGGVLTSMSQDHANHVSAFHMTVGSSPDGPEEFNMPSNF 180

Query: 177 TLGLPGYTCSDPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSPSPGCCVSLSSFY 236
            +G+PGY+C +   VSPTKFS D GRR TQ L TW   CVYSQFRSSPSP CCVSLS+FY
Sbjct: 181 DIGVPGYSCDNATSVSPTKFSTDKGRRKTQALATWEAVCVYSQFRSSPSPKCCVSLSAFY 240

Query: 237 NSTIVPCPQCSCGC 250
              IVPCP CSCGC
Sbjct: 241 YQNIVPCPTCSCGC 254

[Close]

BLAST of Carg13197 vs. ExPASy Swiss-Prot
Match: Q6Z4G8 (COBRA-like protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=BC1L6 PE=2 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 2.4e-67
Identity = 116/203 (57.14%), Postives = 143/203 (70.44%), Query Frame = 0


Query: 59  VSLYNFQLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGKELPHCCEKKPV 118
           VSLYN+Q +RH++ PGWKLGW W   E+IW+M G +AT+QG+CSK+    +PHCC+K P 
Sbjct: 56  VSLYNYQQYRHIQSPGWKLGWVWAKKEIIWAMNGGQATEQGDCSKF-KSNIPHCCKKDPE 115

Query: 119 IVDLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGKSAGKGVDSKMPANFTLG 178
           IVDL+PG PY +Q+ANCCKGGVL+S  QDPAN  A+FQ+++G++       ++P NFTL 
Sbjct: 116 IVDLLPGTPYNMQIANCCKGGVLNSWAQDPANAIASFQVSVGQAGTTNKTVRVPRNFTLK 175

Query: 179 L--PGYTCSDPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSPSPGCCVSLSSFYN 238
              PGYTC     V PTKF    GRR TQ   TWNVTC YSQ  +  SP CCVSLSSFYN
Sbjct: 176 SPGPGYTCGSAKVVRPTKFFSQDGRRTTQAHMTWNVTCTYSQIVAQRSPTCCVSLSSFYN 235

Query: 239 STIVPCPQCSCGCQGLEGTKCIE 260
            TIV CP CSCGCQ  +   C+E
Sbjct: 236 DTIVNCPTCSCGCQNNKPGSCVE 257

[Close]

BLAST of Carg13197 vs. ExPASy Swiss-Prot
Match: Q60E70 (COBRA-like protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=BC1L4 PE=2 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 4.6e-66
Identity = 110/194 (56.70%), Postives = 140/194 (72.16%), Query Frame = 0


Query: 59  VSLYNFQLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGKELPHCCEKKPV 118
           V+++N+Q FRH++ PGW+LGW+W   EVIWSM GA+ T+QG+CSK+ G   PHCC+K P 
Sbjct: 64  VTMFNYQQFRHIQAPGWQLGWTWAKKEVIWSMVGAQTTEQGDCSKFKG-GTPHCCKKDPT 123

Query: 119 IVDLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGKSAGKGVDSKMPANFTLG 178
           +VDL+PG PY +Q+ANCCK GV+++  QDP+N  ++FQ+++G +       K+P NFTL 
Sbjct: 124 VVDLLPGTPYNMQIANCCKAGVINTFNQDPSNAASSFQISVGLAGTTNKTVKLPKNFTLK 183

Query: 179 L--PGYTCSDPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSPSPGCCVSLSSFYN 238
              PGYTC     V PTKF    GRR TQ L TWNVTC YSQF +  +P CCVSLSSFYN
Sbjct: 184 APGPGYTCGRAMIVRPTKFFTGDGRRATQALMTWNVTCTYSQFLAQKTPSCCVSLSSFYN 243

Query: 239 STIVPCPQCSCGCQ 251
            TIV CP CSCGCQ
Sbjct: 244 DTIVNCPTCSCGCQ 256

[Close]

BLAST of Carg13197 vs. ExPASy Swiss-Prot
Match: Q94KT8 (Protein COBRA OS=Arabidopsis thaliana OX=3702 GN=COB PE=2 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 4.3e-64
Identity = 110/205 (53.66%), Postives = 141/205 (68.78%), Query Frame = 0


Query: 59  VSLYNFQLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGKELPHCCEKKPV 118
           V+++NFQ +RH++ PGW LGW W   EVIWSM GA+ T+QG+CSKY G  +PHCC+K P 
Sbjct: 64  VTMFNFQKYRHIQSPGWTLGWKWAKKEVIWSMVGAQTTEQGDCSKYKG-NIPHCCKKDPT 123

Query: 119 IVDLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGKSAGKGVDSKMPANFTL- 178
           +VDL+PG PY  Q+ANCCKGGV++S  QDPA   ++FQ+++G +       ++P NFTL 
Sbjct: 124 VVDLLPGTPYNQQIANCCKGGVMNSWVQDPATAASSFQISVGAAGTTNKTVRVPRNFTLM 183

Query: 179 -GLPGYTCSDPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSPSPGCCVSLSSFYN 238
              PGYTC     V PTKF     RR TQ + TWN+TC YSQF +  +P CCVSLSSFYN
Sbjct: 184 GPGPGYTCGPAKIVRPTKFVTTDTRRTTQAMMTWNITCTYSQFLAQRTPTCCVSLSSFYN 243

Query: 239 STIVPCPQCSCGCQG--LEGTKCIE 260
            TIV CP C+CGCQ    E   C++
Sbjct: 244 ETIVGCPTCACGCQNNRTESGACLD 267

[Close]

BLAST of Carg13197 vs. ExPASy Swiss-Prot
Match: Q8L8Q7 (COBRA-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=COBL2 PE=2 SV=2)

HSP 1 Score: 245.7 bits (626), Expect = 5.6e-64
Identity = 108/194 (55.67%), Postives = 139/194 (71.65%), Query Frame = 0


Query: 59  VSLYNFQLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGKELPHCCEKKPV 118
           V+++NFQ +RH+E PGW+LGWSW   EVIWSM G +AT+QG+CSK+ G  +PHCC+K P 
Sbjct: 56  VTIFNFQQYRHIEAPGWQLGWSWMKKEVIWSMVGGQATEQGDCSKFKG-NIPHCCKKTPA 115

Query: 119 IVDLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGKSAGKGVDSKMPANFTLG 178
           IVDL+PG PY  Q++NCC+GGV+S+  QDPA   ++FQ+++G+S       + P N TL 
Sbjct: 116 IVDLLPGTPYNQQISNCCRGGVISAWAQDPATAISSFQISVGQSGTTNTTVRAPRNITLK 175

Query: 179 L--PGYTCSDPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSPSPGCCVSLSSFYN 238
              PGYTC     V P++F     RR TQ L TWN+TC YSQF +  +P CCVSLS+FYN
Sbjct: 176 APGPGYTCGPAKLVKPSRFISADKRRKTQSLLTWNITCTYSQFLARKTPTCCVSLSAFYN 235

Query: 239 STIVPCPQCSCGCQ 251
            TIVPCP CSCGCQ
Sbjct: 236 ETIVPCPTCSCGCQ 248

[Close]

BLAST of Carg13197 vs. ExPASy TrEMBL
Match: A0A6J1FND0 (COBRA-like protein OS=Cucurbita moschata OX=3662 GN=LOC111447357 PE=3 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 6.7e-121
Identity = 199/203 (98.03%), Postives = 203/203 (100.00%), Query Frame = 0


Query: 57  VRVSLYNFQLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGKELPHCCEKK 116
           VRVSLYNFQLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGKELPHCCEKK
Sbjct: 68  VRVSLYNFQLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGKELPHCCEKK 127

Query: 117 PVIVDLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGKSAGKGVDSKMPANFT 176
           PVIVDLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGKSAGKGVDSKMPANFT
Sbjct: 128 PVIVDLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGKSAGKGVDSKMPANFT 187

Query: 177 LGLPGYTCSDPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSPSPGCCVSLSSFYN 236
           LGLPGYTCSDPFQVSPTKFSKDGGRRWTQVLETWN+TCVYSQFRSSP+PGCCVSLSSFYN
Sbjct: 188 LGLPGYTCSDPFQVSPTKFSKDGGRRWTQVLETWNMTCVYSQFRSSPAPGCCVSLSSFYN 247

Query: 237 STIVPCPQCSCGCQGLEGTKCIE 260
           STIVPCPQCSCGCQG+EGTKC+E
Sbjct: 248 STIVPCPQCSCGCQGIEGTKCVE 270

[Close]

BLAST of Carg13197 vs. ExPASy TrEMBL
Match: A0A6J1IS70 (COBRA-like protein OS=Cucurbita maxima OX=3661 GN=LOC111480058 PE=3 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 3.3e-120
Identity = 199/203 (98.03%), Postives = 202/203 (99.51%), Query Frame = 0


Query: 57  VRVSLYNFQLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGKELPHCCEKK 116
           VRVSLYNFQLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGKELPHCCEKK
Sbjct: 68  VRVSLYNFQLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGKELPHCCEKK 127

Query: 117 PVIVDLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGKSAGKGVDSKMPANFT 176
           PVIVDLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGKSAGK VDSKMPANFT
Sbjct: 128 PVIVDLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGKSAGKVVDSKMPANFT 187

Query: 177 LGLPGYTCSDPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSPSPGCCVSLSSFYN 236
           LGLPGYTCSDPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSP+PGCCVSLSSFYN
Sbjct: 188 LGLPGYTCSDPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSPAPGCCVSLSSFYN 247

Query: 237 STIVPCPQCSCGCQGLEGTKCIE 260
           STIVPCPQCSCGCQG+EGTKC+E
Sbjct: 248 STIVPCPQCSCGCQGIEGTKCVE 270

[Close]

BLAST of Carg13197 vs. ExPASy TrEMBL
Match: A0A6J1C3M6 (COBRA-like protein OS=Momordica charantia OX=3673 GN=LOC111008188 PE=3 SV=1)

HSP 1 Score: 423.7 bits (1088), Expect = 5.5e-115
Identity = 186/203 (91.63%), Postives = 196/203 (96.55%), Query Frame = 0


Query: 57  VRVSLYNFQLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGKELPHCCEKK 116
           VRVS+YNFQLFRHVELPGWKLGWSWKGDEVIW MWGAEATQQGNCSKYIG+ELPHCCEK+
Sbjct: 52  VRVSIYNFQLFRHVELPGWKLGWSWKGDEVIWGMWGAEATQQGNCSKYIGRELPHCCEKE 111

Query: 117 PVIVDLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGKSAGKGVDSKMPANFT 176
           PVIVDLMPGAPYKLQVANCC+GGVLSSM+QDP NYGAAFQMN+GKSAGK VD KMP NFT
Sbjct: 112 PVIVDLMPGAPYKLQVANCCRGGVLSSMKQDPTNYGAAFQMNVGKSAGKDVDGKMPENFT 171

Query: 177 LGLPGYTCSDPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSPSPGCCVSLSSFYN 236
           +GLPGYTC DPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSP+PGCCVSLSSFYN
Sbjct: 172 MGLPGYTCGDPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSPAPGCCVSLSSFYN 231

Query: 237 STIVPCPQCSCGCQGLEGTKCIE 260
           STIVPCPQCSCGCQGL GTKC++
Sbjct: 232 STIVPCPQCSCGCQGLAGTKCVK 254

[Close]

BLAST of Carg13197 vs. ExPASy TrEMBL
Match: A0A5D3CLA0 (COBRA-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G00360 PE=3 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 1.8e-113
Identity = 184/203 (90.64%), Postives = 196/203 (96.55%), Query Frame = 0


Query: 57  VRVSLYNFQLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGKELPHCCEKK 116
           VRVSLYNFQLFRHVELPGWKLGWSWKG+EVIW MWGAE TQQGNCSKY+G+ELPHCCEKK
Sbjct: 11  VRVSLYNFQLFRHVELPGWKLGWSWKGEEVIWGMWGAETTQQGNCSKYVGRELPHCCEKK 70

Query: 117 PVIVDLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGKSAGKGVDSKMPANFT 176
           P IVDLMPGAPYKLQVANCCK GVLSSMRQ+P+NYGAAFQMN+GKS+GK VDSKMPANFT
Sbjct: 71  PEIVDLMPGAPYKLQVANCCKAGVLSSMRQEPSNYGAAFQMNVGKSSGKDVDSKMPANFT 130

Query: 177 LGLPGYTCSDPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSPSPGCCVSLSSFYN 236
           LGLPGYTCS+PFQV PTKFSKDGGRRW QVLETWNVTCVYSQFRSSP+PGCCVSLSSFYN
Sbjct: 131 LGLPGYTCSEPFQVPPTKFSKDGGRRWMQVLETWNVTCVYSQFRSSPTPGCCVSLSSFYN 190

Query: 237 STIVPCPQCSCGCQGLEGTKCIE 260
           STIVPCPQCSCGCQGL+GTKC++
Sbjct: 191 STIVPCPQCSCGCQGLKGTKCVK 213

[Close]

BLAST of Carg13197 vs. ExPASy TrEMBL
Match: A0A5A7T7U4 (COBRA-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84G00230 PE=3 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 1.8e-113
Identity = 184/203 (90.64%), Postives = 196/203 (96.55%), Query Frame = 0


Query: 57  VRVSLYNFQLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGKELPHCCEKK 116
           VRVSLYNFQLFRHVELPGWKLGWSWKG+EVIW MWGAE TQQGNCSKY+G+ELPHCCEKK
Sbjct: 11  VRVSLYNFQLFRHVELPGWKLGWSWKGEEVIWGMWGAETTQQGNCSKYVGRELPHCCEKK 70

Query: 117 PVIVDLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGKSAGKGVDSKMPANFT 176
           P IVDLMPGAPYKLQVANCCK GVLSSMRQ+P+NYGAAFQMN+GKS+GK VDSKMPANFT
Sbjct: 71  PEIVDLMPGAPYKLQVANCCKAGVLSSMRQEPSNYGAAFQMNVGKSSGKDVDSKMPANFT 130

Query: 177 LGLPGYTCSDPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSPSPGCCVSLSSFYN 236
           LGLPGYTCS+PFQV PTKFSKDGGRRW QVLETWNVTCVYSQFRSSP+PGCCVSLSSFYN
Sbjct: 131 LGLPGYTCSEPFQVPPTKFSKDGGRRWMQVLETWNVTCVYSQFRSSPTPGCCVSLSSFYN 190

Query: 237 STIVPCPQCSCGCQGLEGTKCIE 260
           STIVPCPQCSCGCQGL+GTKC++
Sbjct: 191 STIVPCPQCSCGCQGLKGTKCVK 213

[Close]

BLAST of Carg13197 vs. TAIR 10
Match: AT1G09790.1 (COBRA-like protein 6 precursor )

HSP 1 Score: 263.5 bits (672), Expect = 1.8e-70
Identity = 119/194 (61.34%), Postives = 140/194 (72.16%), Query Frame = 0


Query: 57  VRVSLYNFQLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGK-ELPHCCEK 116
           V+V+L N Q +RHVE PGWKL W W   EVIW M GAE T+QGNCS +     LPHCC +
Sbjct: 61  VQVTLENMQEYRHVEKPGWKLSWHWLNQEVIWDMKGAETTEQGNCSAFASSGNLPHCCLE 120

Query: 117 KPVIVDLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGKSAGKGVDSKMPANF 176
           +P IVDL+PGA   +QVANCC+GGVL+SM QD AN+ +AF M +G S     +  MP+NF
Sbjct: 121 RPTIVDLLPGASLNVQVANCCRGGVLTSMSQDHANHVSAFHMTVGSSPDGPEEFNMPSNF 180

Query: 177 TLGLPGYTCSDPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSPSPGCCVSLSSFY 236
            +G+PGY+C +   VSPTKFS D GRR TQ L TW   CVYSQFRSSPSP CCVSLS+FY
Sbjct: 181 DIGVPGYSCDNATSVSPTKFSTDKGRRKTQALATWEAVCVYSQFRSSPSPKCCVSLSAFY 240

Query: 237 NSTIVPCPQCSCGC 250
              IVPCP CSCGC
Sbjct: 241 YQNIVPCPTCSCGC 254

[Close]

BLAST of Carg13197 vs. TAIR 10
Match: AT5G60920.1 (COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family )

HSP 1 Score: 246.1 bits (627), Expect = 3.0e-65
Identity = 110/205 (53.66%), Postives = 141/205 (68.78%), Query Frame = 0


Query: 59  VSLYNFQLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGKELPHCCEKKPV 118
           V+++NFQ +RH++ PGW LGW W   EVIWSM GA+ T+QG+CSKY G  +PHCC+K P 
Sbjct: 64  VTMFNFQKYRHIQSPGWTLGWKWAKKEVIWSMVGAQTTEQGDCSKYKG-NIPHCCKKDPT 123

Query: 119 IVDLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGKSAGKGVDSKMPANFTL- 178
           +VDL+PG PY  Q+ANCCKGGV++S  QDPA   ++FQ+++G +       ++P NFTL 
Sbjct: 124 VVDLLPGTPYNQQIANCCKGGVMNSWVQDPATAASSFQISVGAAGTTNKTVRVPRNFTLM 183

Query: 179 -GLPGYTCSDPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSPSPGCCVSLSSFYN 238
              PGYTC     V PTKF     RR TQ + TWN+TC YSQF +  +P CCVSLSSFYN
Sbjct: 184 GPGPGYTCGPAKIVRPTKFVTTDTRRTTQAMMTWNITCTYSQFLAQRTPTCCVSLSSFYN 243

Query: 239 STIVPCPQCSCGCQG--LEGTKCIE 260
            TIV CP C+CGCQ    E   C++
Sbjct: 244 ETIVGCPTCACGCQNNRTESGACLD 267

[Close]

BLAST of Carg13197 vs. TAIR 10
Match: AT3G29810.1 (COBRA-like protein 2 precursor )

HSP 1 Score: 245.7 bits (626), Expect = 4.0e-65
Identity = 108/194 (55.67%), Postives = 139/194 (71.65%), Query Frame = 0


Query: 59  VSLYNFQLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGKELPHCCEKKPV 118
           V+++NFQ +RH+E PGW+LGWSW   EVIWSM G +AT+QG+CSK+ G  +PHCC+K P 
Sbjct: 56  VTIFNFQQYRHIEAPGWQLGWSWMKKEVIWSMVGGQATEQGDCSKFKG-NIPHCCKKTPA 115

Query: 119 IVDLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGKSAGKGVDSKMPANFTLG 178
           IVDL+PG PY  Q++NCC+GGV+S+  QDPA   ++FQ+++G+S       + P N TL 
Sbjct: 116 IVDLLPGTPYNQQISNCCRGGVISAWAQDPATAISSFQISVGQSGTTNTTVRAPRNITLK 175

Query: 179 L--PGYTCSDPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSPSPGCCVSLSSFYN 238
              PGYTC     V P++F     RR TQ L TWN+TC YSQF +  +P CCVSLS+FYN
Sbjct: 176 APGPGYTCGPAKLVKPSRFISADKRRKTQSLLTWNITCTYSQFLARKTPTCCVSLSAFYN 235

Query: 239 STIVPCPQCSCGCQ 251
            TIVPCP CSCGCQ
Sbjct: 236 ETIVPCPTCSCGCQ 248

[Close]

BLAST of Carg13197 vs. TAIR 10
Match: AT3G02210.1 (COBRA-like protein 1 precursor )

HSP 1 Score: 245.4 bits (625), Expect = 5.2e-65
Identity = 110/194 (56.70%), Postives = 138/194 (71.13%), Query Frame = 0


Query: 59  VSLYNFQLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGKELPHCCEKKPV 118
           V++YNFQ +RH++ PGW LGWSW   EVIW M G + T+QG+CSK+ G  +PHCC+K P 
Sbjct: 61  VTVYNFQQYRHIQAPGWTLGWSWAKREVIWGMNGGQTTEQGDCSKFKG-TIPHCCKKTPS 120

Query: 119 IVDLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGKSAGKGVDSKMPANFTLG 178
           +VDL+PG+PY  Q+ANCC+GGVL+S  QDPA   +AFQ+ +G++       ++P NFTL 
Sbjct: 121 VVDLLPGSPYNQQIANCCRGGVLNSWAQDPATAVSAFQLTVGQAGTTNKTVRVPKNFTLK 180

Query: 179 L--PGYTCSDPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSPSPGCCVSLSSFYN 238
              PGYTCS    V PT+F     RR TQ L TWNVTC YSQF +  +P CCVSLSSFYN
Sbjct: 181 APGPGYTCSPAKIVKPTRFIGTDKRRVTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYN 240

Query: 239 STIVPCPQCSCGCQ 251
            TIV CP CSCGC+
Sbjct: 241 KTIVSCPTCSCGCR 253

[Close]

BLAST of Carg13197 vs. TAIR 10
Match: AT5G15630.1 (COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family )

HSP 1 Score: 228.8 bits (582), Expect = 5.0e-60
Identity = 103/194 (53.09%), Postives = 130/194 (67.01%), Query Frame = 0


Query: 59  VSLYNFQLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGKELPHCCEKKPV 118
           V++ NFQ++RH++ PGW LGW+W   EVIWSM GA+ T+QG+CSK+ G  +PHCC+K P 
Sbjct: 48  VTMNNFQIYRHIQNPGWTLGWTWAKKEVIWSMVGAQTTEQGDCSKFKG-NVPHCCKKTPT 107

Query: 119 IVDLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGKSAGKGVDSKMPANFTL- 178
           +VDL+PG PY  Q +NCCKGGV+ +  QDP+   + FQ++ G +       K+P NFTL 
Sbjct: 108 VVDLLPGVPYNQQFSNCCKGGVIGAWGQDPSAAVSQFQVSAGLAGTTNKTVKLPKNFTLL 167

Query: 179 -GLPGYTCSDPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSPSPGCCVSLSSFYN 238
              PGYTC     V  T F     RR TQ L TWNVTC YSQF +   P CCVS SSFYN
Sbjct: 168 GPGPGYTCGPAKIVPSTVFLTTDKRRKTQALMTWNVTCTYSQFLARKHPSCCVSFSSFYN 227

Query: 239 STIVPCPQCSCGCQ 251
            TI PCP C+CGC+
Sbjct: 228 DTITPCPSCACGCE 240

The following BLAST results are available for this feature:

BLAST of Carg13197 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7031033.1	1.3e-155	100.00	COBRA-like protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6600373.1	1.3e-121	100.00	COBRA-like protein 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022942251.1	1.4e-120	98.03	COBRA-like protein 6 [Cucurbita moschata]	[more]
XP_023533604.1	3.1e-120	97.54	COBRA-like protein 6 [Cucurbita pepo subsp. pepo]	[more]
XP_022980772.1	6.9e-120	98.03	COBRA-like protein 6 [Cucurbita maxima]	[more]

BLAST of Carg13197 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04500	2.6e-69	61.34	COBRA-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=COBL6 PE=2 SV=2	[more]
Q6Z4G8	2.4e-67	57.14	COBRA-like protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=BC1L6 PE=2 SV=1	[more]
Q60E70	4.6e-66	56.70	COBRA-like protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=BC1L4 PE=2 SV=1	[more]
Q94KT8	4.3e-64	53.66	Protein COBRA OS=Arabidopsis thaliana OX=3702 GN=COB PE=2 SV=1	[more]
Q8L8Q7	5.6e-64	55.67	COBRA-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=COBL2 PE=2 SV=2	[more]

BLAST of Carg13197 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FND0	6.7e-121	98.03	COBRA-like protein OS=Cucurbita moschata OX=3662 GN=LOC111447357 PE=3 SV=1	[more]
A0A6J1IS70	3.3e-120	98.03	COBRA-like protein OS=Cucurbita maxima OX=3661 GN=LOC111480058 PE=3 SV=1	[more]
A0A6J1C3M6	5.5e-115	91.63	COBRA-like protein OS=Momordica charantia OX=3673 GN=LOC111008188 PE=3 SV=1	[more]
A0A5D3CLA0	1.8e-113	90.64	COBRA-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G0...	[more]
A0A5A7T7U4	1.8e-113	90.64	COBRA-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84G00...	[more]

BLAST of Carg13197 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09790.1	1.8e-70	61.34	COBRA-like protein 6 precursor	[more]
AT5G60920.1	3.0e-65	53.66	COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family	[more]
AT3G29810.1	4.0e-65	55.67	COBRA-like protein 2 precursor	[more]
AT3G02210.1	5.2e-65	56.70	COBRA-like protein 1 precursor	[more]
AT5G15630.1	5.0e-60	53.09	COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006918	COBRA, plant	PFAM	PF04833	COBRA	coord: 57..217 e-value: 1.1E-59 score: 201.1
IPR006918	COBRA, plant	PANTHER	PTHR31673	PROTEIN COBRA	coord: 56..258
None	No IPR available	PANTHER	PTHR31673:SF30	COBRA-LIKE PROTEIN 6	coord: 56..258

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg13197-RA	Carg13197-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010215	cellulose microfibril organization
biological_process	GO:0052324	plant-type cell wall cellulose biosynthetic process
cellular_component	GO:0046658	anchored component of plasma membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0031225	anchored component of membrane
molecular_function	GO:0030246	carbohydrate binding