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Carg13195 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTATTTCTTCTCTCTTCGTTTGCAGGCACTGGACACTTTTAATACAGCTGTTGTGTCCCCAATATACTACGTTATGTTCACATCATTTACCATCTTGGCCAGCGTGATTATGTTTAAGGTTTGTCCGACTGCTGATGTTGGTTCCTTTACACGCACAATATGATCAAATGTATCGTGATATGTTTAAAAATTTGACACAACACAATAAGGATCACATAGATGAGGAACATTTGGAGTTTTGCCTGCTTGAATATCCTTTCTTGCTGTTGCCTGGTTCTATGAGTCAGTGTCTTCTGTTCTAGTTTATAGATGGACCTAGAAGCCACAGTGCACCATTACGTTCTTGGTAGCAGTGTCAGACCATACTTTATATTTAAACATATCCTCTCTCTCACTCACTCTCTTTGGGATAACATATTCCTTTCATTAAGGGTAATGAAAGCACGCTACCTTAGGATATAAAAACACAGGCAAAAGCCAGCAAGGAGAGGGATTTTAACAGGAAATTACAGGGAACTTGAACTAAGAATCAAAAACAAAGGAGCAACACATAACAATTTGGACTCATATGGCGCTTCAATCATTCTTGTTATACATTAGTGACAATATAGAACATTAGAATTGTTCCCTTTAAATATTTAAATGAAGGTAGACTTCAACGTCTTTTGAATTACTTGTTTCAGGACTGGGACAGGCAGAGCCCAACACAGGTTGTAACGGAGATGTGTGGATTTGTGACCATTCTTTCAGGAACTTTTCTTCTTCATAAAACAAAGGACATGGCTGATGGTATGCCTCCCTATCTCTTTCTTAGGACATTGTCATCAATATTTCTTTTATTAGCAATAAAATGAACATATTAAAAATTATGCTGCCATTATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTAATCTCTGTTTATTTCTTGCCTACGAAGACACACCATCCCTTCCCCCGTTCTTGTTTTTTATTTTATTTTATTTTATTTTATTATTTTGATAGCTGGGTATCAGGAACCTCATATAATGGCCCACCCCAGTCATATCCGAAGGGGCTTTGTCCTACACGGCTACACCCAAAGCCTGTCCTAAGAGAGATAATAAGGGGTTTTAATTATCAAACAACTATCTAAGATGAGAGATGAAATATCTTATGTAGATATAAGTTATTAGGTTTTATCGTCTTATGAGAAGTTTTCTCATTCTTTCGGGGTGAAAAAAGAAAGGGAAGTTGTGGAAGAAGATTGAAGTTCACTTTTGGTAATTTCTAGATTATTGGCCGAGGATGATTGGTTGGACATCGAGGAGATTTTTGTTTCTTGTTAAAATTATCGAAGTTTTTAGCTCAACACTTAAACCCAAGACATCTCGAACCCTTACCACTAGGGGGCACCCCTTGGGATTCCCTTATCACTACTATTCGTCTTTGCCGTGTTTAATGTGAATAAAAACGAACTGCTACTATCACATTGAACTTTGAAGGATATGTTTTTTTATTTTTCACGAAAGTTGAATTTAGTCCATAACTTTGCAAGCTGATGCAGGTTCAGCGGGAAACTCATTGCGACTCTCTAAGCATGCTGATGAGGATGGTTTTAGTGGTGCAGAAGGCATTCCTCTTAGACGGCAAGATTCCTTGAGGTTGCCTTGATGCCTAAAAAACAAGTACTGGTTTTGTTCAGGTTTCATGCCGACATCAACTTGTATTCTATCACAAATTTCTACCCCCTTGATGTTCCTTTGTGGATAAAGTAGAAGATAGAAAGGTGAGAATTTTCTATCATTTCCATTCTATCTCCCAAGACTTGACAATGAATGGGGGTAATGCCTATTGCCTTTGTACACAAGTTCTTGCGACTCC ATGTATTTCTTCTCTCTTCGTTTGCAGGCACTGGACACTTTTAATACAGCTGTTGTGTCCCCAATATACTACGTTATGTTCACATCATTTACCATCTTGGCCAGCGTGATTATGTTTAAGGACTGGGACAGGCAGAGCCCAACACAGGTTGTAACGGAGATGTGTGGATTTGTGACCATTCTTTCAGGAACTTTTCTTCTTCATAAAACAAAGGACATGGCTGATGGTTCAGCGGGAAACTCATTGCGACTCTCTAAGCATGCTGATGAGGATGGTTTTAGTGGTGCAGAAGGCATTCCTCTTAGACGGCAAGATTCCTTGAGGTTGCCTTGATGCCTAAAAAACAAGTACTGGTTTTGTTCAGGTTTCATGCCGACATCAACTTGTATTCTATCACAAATTTCTACCCCCTTGATGTTCCTTTGTGGATAAAGTAGAAGATAGAAAGGTGAGAATTTTCTATCATTTCCATTCTATCTCCCAAGACTTGACAATGAATGGGGGTAATGCCTATTGCCTTTGTACACAAGTTCTTGCGACTCC ATGTATTTCTTCTCTCTTCGTTTGCAGGCACTGGACACTTTTAATACAGCTGTTGTGTCCCCAATATACTACGTTATGTTCACATCATTTACCATCTTGGCCAGCGTGATTATGTTTAAGGACTGGGACAGGCAGAGCCCAACACAGGTTGTAACGGAGATGTGTGGATTTGTGACCATTCTTTCAGGAACTTTTCTTCTTCATAAAACAAAGGACATGGCTGATGGTTCAGCGGGAAACTCATTGCGACTCTCTAAGCATGCTGATGAGGATGGTTTTAGTGGTGCAGAAGGCATTCCTCTTAGACGGCAAGATTCCTTGAGGTTGCCTTGA MYFFSLRLQALDTFNTAVVSPIYYVMFTSFTILASVIMFKDWDRQSPTQVVTEMCGFVTILSGTFLLHKTKDMADGSAGNSLRLSKHADEDGFSGAEGIPLRRQDSLRLP Homology
BLAST of Carg13195 vs. NCBI nr
Match: KAG7031035.1 (putative magnesium transporter NIPA4, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 218.8 bits (556), Expect = 2.4e-53 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0
BLAST of Carg13195 vs. NCBI nr
Match: XP_022942258.1 (probable magnesium transporter NIPA4 isoform X1 [Cucurbita moschata] >XP_023539503.1 probable magnesium transporter NIPA4 [Cucurbita pepo subsp. pepo] >KAG6600375.1 putative magnesium transporter NIPA4, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 202.6 bits (514), Expect = 1.8e-48 Identity = 101/102 (99.02%), Postives = 102/102 (100.00%), Query Frame = 0
BLAST of Carg13195 vs. NCBI nr
Match: XP_022981729.1 (probable magnesium transporter NIPA4 isoform X1 [Cucurbita maxima]) HSP 1 Score: 201.1 bits (510), Expect = 5.1e-48 Identity = 100/102 (98.04%), Postives = 101/102 (99.02%), Query Frame = 0
BLAST of Carg13195 vs. NCBI nr
Match: XP_022136459.1 (probable magnesium transporter NIPA4 [Momordica charantia]) HSP 1 Score: 184.9 bits (468), Expect = 3.8e-43 Identity = 93/103 (90.29%), Postives = 99/103 (96.12%), Query Frame = 0
BLAST of Carg13195 vs. NCBI nr
Match: XP_022922721.1 (probable magnesium transporter NIPA4 isoform X1 [Cucurbita moschata] >XP_023552525.1 probable magnesium transporter NIPA4 isoform X1 [Cucurbita pepo subsp. pepo] >KAG7015012.1 putative magnesium transporter NIPA4 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 184.5 bits (467), Expect = 4.9e-43 Identity = 94/103 (91.26%), Postives = 98/103 (95.15%), Query Frame = 0
BLAST of Carg13195 vs. ExPASy Swiss-Prot
Match: Q94AH3 (Probable magnesium transporter NIPA4 OS=Arabidopsis thaliana OX=3702 GN=At1g71900 PE=2 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 3.9e-35 Identity = 77/103 (74.76%), Postives = 89/103 (86.41%), Query Frame = 0
BLAST of Carg13195 vs. ExPASy Swiss-Prot
Match: Q9LNK7 (Probable magnesium transporter NIPA3 OS=Arabidopsis thaliana OX=3702 GN=At1g34470 PE=2 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 2.4e-32 Identity = 76/107 (71.03%), Postives = 85/107 (79.44%), Query Frame = 0
BLAST of Carg13195 vs. ExPASy Swiss-Prot
Match: F4JKQ7 (Probable magnesium transporter NIPA5 OS=Arabidopsis thaliana OX=3702 GN=At4g09640 PE=2 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 2.2e-30 Identity = 74/114 (64.91%), Postives = 85/114 (74.56%), Query Frame = 0
BLAST of Carg13195 vs. ExPASy Swiss-Prot
Match: Q9LIR9 (Probable magnesium transporter NIPA1 OS=Arabidopsis thaliana OX=3702 GN=At3g23870 PE=2 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 1.1e-24 Identity = 52/71 (73.24%), Postives = 64/71 (90.14%), Query Frame = 0
BLAST of Carg13195 vs. ExPASy Swiss-Prot
Match: B3LFA3 (Probable magnesium transporter NIPA2 OS=Arabidopsis thaliana OX=3702 GN=At4g13800 PE=2 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 3.1e-24 Identity = 52/70 (74.29%), Postives = 62/70 (88.57%), Query Frame = 0
BLAST of Carg13195 vs. ExPASy TrEMBL
Match: A0A6J1FUC7 (Probable magnesium transporter OS=Cucurbita moschata OX=3662 GN=LOC111447359 PE=3 SV=1) HSP 1 Score: 202.6 bits (514), Expect = 8.5e-49 Identity = 101/102 (99.02%), Postives = 102/102 (100.00%), Query Frame = 0
BLAST of Carg13195 vs. ExPASy TrEMBL
Match: A0A6J1J2N7 (Probable magnesium transporter OS=Cucurbita maxima OX=3661 GN=LOC111480792 PE=3 SV=1) HSP 1 Score: 201.1 bits (510), Expect = 2.5e-48 Identity = 100/102 (98.04%), Postives = 101/102 (99.02%), Query Frame = 0
BLAST of Carg13195 vs. ExPASy TrEMBL
Match: A0A6J1C4C7 (Probable magnesium transporter OS=Momordica charantia OX=3673 GN=LOC111008165 PE=3 SV=1) HSP 1 Score: 184.9 bits (468), Expect = 1.8e-43 Identity = 93/103 (90.29%), Postives = 99/103 (96.12%), Query Frame = 0
BLAST of Carg13195 vs. ExPASy TrEMBL
Match: A0A5A7TA80 (Probable magnesium transporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G00390 PE=3 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 2.4e-43 Identity = 93/103 (90.29%), Postives = 97/103 (94.17%), Query Frame = 0
BLAST of Carg13195 vs. ExPASy TrEMBL
Match: A0A6J1E4W8 (Probable magnesium transporter OS=Cucurbita moschata OX=3662 GN=LOC111430631 PE=3 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 2.4e-43 Identity = 94/103 (91.26%), Postives = 98/103 (95.15%), Query Frame = 0
BLAST of Carg13195 vs. TAIR 10
Match: AT1G71900.1 (Protein of unknown function (DUF803) ) HSP 1 Score: 148.7 bits (374), Expect = 2.8e-36 Identity = 77/103 (74.76%), Postives = 89/103 (86.41%), Query Frame = 0
BLAST of Carg13195 vs. TAIR 10
Match: AT1G34470.1 (Protein of unknown function (DUF803) ) HSP 1 Score: 139.4 bits (350), Expect = 1.7e-33 Identity = 76/107 (71.03%), Postives = 85/107 (79.44%), Query Frame = 0
BLAST of Carg13195 vs. TAIR 10
Match: AT4G09640.1 (Protein of unknown function (DUF803) ) HSP 1 Score: 132.9 bits (333), Expect = 1.6e-31 Identity = 74/114 (64.91%), Postives = 85/114 (74.56%), Query Frame = 0
BLAST of Carg13195 vs. TAIR 10
Match: AT3G23870.1 (Protein of unknown function (DUF803) ) HSP 1 Score: 114.0 bits (284), Expect = 7.6e-26 Identity = 52/71 (73.24%), Postives = 64/71 (90.14%), Query Frame = 0
BLAST of Carg13195 vs. TAIR 10
Match: AT4G13800.1 (Protein of unknown function (DUF803) ) HSP 1 Score: 112.5 bits (280), Expect = 2.2e-25 Identity = 52/70 (74.29%), Postives = 62/70 (88.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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