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Carg13192 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTCATTCTCTGATTGCTTTAACATGTGGAGCCTTAATGATGTTTTATTCCCACGAGGTCTATGTGTTTGGCCATGGCCCTGAGACTGCAATCAAGCTGCAGGGATCTAGCCCTCGTGATCAGCTTCTGATAAAAACATCTGATTCCTTCTCTGGTTTGCTTCTCTTTACTGTTGGGTTTCTTTTATTCATGGTGGCTTTTGTCAAAGACAGAGACTTCCAAAGCTTCTTTGCTAAAGGGTGCGTGTTGCTTCACTTAGCTATGGCCATATGGAGAGTTTACTTCGAGAGGAAGCTCGAAGATCTTGCTAAAGATTGGCCTCGACAGGTCGTTGGGGATGTCACATTGGCATTGTCATGGGTTTTCTTTCTTATGTATTCATGGAGAGAAAAGTATGATTAACTTCAGGTTCAAATTTTCTTTAGCTGCCAGACTTGTCTAAGATTGTCAATTATGACTCTGCTTCTTAATTATAATGAGCTTGATGGAAATTGATATTGTTTTCACTGGTTTTTGCTACCATTTGTGTTCTAGAATAGGGGATGTGGGAACTGGGAAGTGAGATAGGAATTGAACATTGATTTGATTGGTTTCCGCTAACATGATTGAGCTTGAATTTGGTTTGTGCACTGTATCTGAAAAATATCAGATGGCTATCGTTTGCAAGAGTATGCGTTTTGTCTTTCCTTATGGTTATAATCAAAGTTCAAATCCATGCCAAAATGAAAGTTTGGCCCATGAATTTGACACTTGGAGTGGTAGCTTGGGCATTAGTGGAAGGATGGGCAAGAACGATAGGCCTCTAGGCGAAATGACACATGAATAAACTGACACCACATAAAAATGAGAGTGATTTTGAGCCCATGCAACTTAGAGCAATTCTAGTTTGGGTGACCTCTAAGAAGTGTGTATGTGATGATTAAACATGTCGAAAGAACTCGTGCTCGTTTGTAGAGACAACCTTCTATGTCAAAGCCAACCGACGATGCTATGTGGCACATGTAGATTGCTAGGGATGTAGGGGAATTGGGAATATTGGGGCTATCAAGTGCAGTACCTTGGGTCAGGGACTTCACAAGTGAGATTAACTTGTTTGATTTGTTGTGCTAAAGTATTTGATTGTTTTCTTGTTGTTGTCTTTCATATAGTGGTAGAAGATTCCATATCCAATTATTTGCTGGTATCGATTCTTTATCCTTGTTAGTATGTTATATTTTGACACAGTGGGCAGAGGAATTCAAACCAAAGGTAGATTAAATAAATCAATGGAACTTTATCTGTTGTACTAATGAATCTTGTCTTGATAGTTTTCGTACCTATGTCGATGGGAAAAGATTGAAATGA ATGCTTCATTCTCTGATTGCTTTAACATGTGGAGCCTTAATGATGTTTTATTCCCACGAGGTCTATGTGTTTGGCCATGGCCCTGAGACTGCAATCAAGCTGCAGGGATCTAGCCCTCGTGATCAGCTTCTGATAAAAACATCTGATTCCTTCTCTGGTTTGCTTCTCTTTACTGTTGGGTTTCTTTTATTCATGGTGGCTTTTGTCAAAGACAGAGACTTCCAAAGCTTCTTTGCTAAAGGGTGCGTGTTGCTTCACTTAGCTATGGCCATATGGAGAGTTTACTTCGAGAGGAAGCTCGAAGATCTTGCTAAAGATTGGCCTCGACAGGTCGTTGGGGATGTCACATTGGCATTGTCATGGGTTTTCTTTCTTATGTATTCATGGAGAGAAAAGGGAATTGGGAATATTGGGGCTATCAAGTGCAGTACCTTGGGTCAGGGACTTCACAATTTTCGTACCTATGTCGATGGGAAAAGATTGAAATGA ATGCTTCATTCTCTGATTGCTTTAACATGTGGAGCCTTAATGATGTTTTATTCCCACGAGGTCTATGTGTTTGGCCATGGCCCTGAGACTGCAATCAAGCTGCAGGGATCTAGCCCTCGTGATCAGCTTCTGATAAAAACATCTGATTCCTTCTCTGGTTTGCTTCTCTTTACTGTTGGGTTTCTTTTATTCATGGTGGCTTTTGTCAAAGACAGAGACTTCCAAAGCTTCTTTGCTAAAGGGTGCGTGTTGCTTCACTTAGCTATGGCCATATGGAGAGTTTACTTCGAGAGGAAGCTCGAAGATCTTGCTAAAGATTGGCCTCGACAGGTCGTTGGGGATGTCACATTGGCATTGTCATGGGTTTTCTTTCTTATGTATTCATGGAGAGAAAAGGGAATTGGGAATATTGGGGCTATCAAGTGCAGTACCTTGGGTCAGGGACTTCACAATTTTCGTACCTATGTCGATGGGAAAAGATTGAAATGA MLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDRDFQSFFAKGCVLLHLAMAIWRVYFERKLEDLAKDWPRQVVGDVTLALSWVFFLMYSWREKGIGNIGAIKCSTLGQGLHNFRTYVDGKRLK Homology
BLAST of Carg13192 vs. NCBI nr
Match: KAG7031038.1 (hypothetical protein SDJN02_05077, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 335.9 bits (860), Expect = 2.0e-88 Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0
BLAST of Carg13192 vs. NCBI nr
Match: KAG6600377.1 (hypothetical protein SDJN03_05610, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 272.7 bits (696), Expect = 2.0e-69 Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of Carg13192 vs. NCBI nr
Match: XP_022941561.1 (uncharacterized protein LOC111446881 [Cucurbita moschata] >XP_022941562.1 uncharacterized protein LOC111446881 [Cucurbita moschata] >XP_022941563.1 uncharacterized protein LOC111446881 [Cucurbita moschata] >XP_022941564.1 uncharacterized protein LOC111446881 [Cucurbita moschata] >XP_022941565.1 uncharacterized protein LOC111446881 [Cucurbita moschata] >XP_023539521.1 uncharacterized protein LOC111800160 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 272.7 bits (696), Expect = 2.0e-69 Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of Carg13192 vs. NCBI nr
Match: XP_022983116.1 (uncharacterized protein LOC111481757 [Cucurbita maxima]) HSP 1 Score: 271.6 bits (693), Expect = 4.5e-69 Identity = 131/132 (99.24%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of Carg13192 vs. NCBI nr
Match: XP_008456033.1 (PREDICTED: uncharacterized protein LOC103496084 [Cucumis melo]) HSP 1 Score: 266.5 bits (680), Expect = 1.5e-67 Identity = 128/132 (96.97%), Postives = 131/132 (99.24%), Query Frame = 0
BLAST of Carg13192 vs. ExPASy TrEMBL
Match: A0A6J1FMS5 (uncharacterized protein LOC111446881 OS=Cucurbita moschata OX=3662 GN=LOC111446881 PE=4 SV=1) HSP 1 Score: 272.7 bits (696), Expect = 9.8e-70 Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of Carg13192 vs. ExPASy TrEMBL
Match: A0A6J1J176 (uncharacterized protein LOC111481757 OS=Cucurbita maxima OX=3661 GN=LOC111481757 PE=4 SV=1) HSP 1 Score: 271.6 bits (693), Expect = 2.2e-69 Identity = 131/132 (99.24%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of Carg13192 vs. ExPASy TrEMBL
Match: A0A1S3C293 (uncharacterized protein LOC103496084 OS=Cucumis melo OX=3656 GN=LOC103496084 PE=4 SV=1) HSP 1 Score: 266.5 bits (680), Expect = 7.1e-68 Identity = 128/132 (96.97%), Postives = 131/132 (99.24%), Query Frame = 0
BLAST of Carg13192 vs. ExPASy TrEMBL
Match: A0A6J1J9R2 (uncharacterized protein LOC111482570 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482570 PE=4 SV=1) HSP 1 Score: 265.0 bits (676), Expect = 2.1e-67 Identity = 127/132 (96.21%), Postives = 131/132 (99.24%), Query Frame = 0
BLAST of Carg13192 vs. ExPASy TrEMBL
Match: A0A6J1E545 (uncharacterized protein LOC111430823 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430823 PE=4 SV=1) HSP 1 Score: 261.9 bits (668), Expect = 1.7e-66 Identity = 126/132 (95.45%), Postives = 130/132 (98.48%), Query Frame = 0
BLAST of Carg13192 vs. TAIR 10
Match: AT1G53035.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15358.1); Has 49 Blast hits to 49 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 185.3 bits (469), Expect = 4.0e-47 Identity = 84/132 (63.64%), Postives = 109/132 (82.58%), Query Frame = 0
BLAST of Carg13192 vs. TAIR 10
Match: AT3G15358.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53035.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 181.0 bits (458), Expect = 7.5e-46 Identity = 82/132 (62.12%), Postives = 108/132 (81.82%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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