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Carg13177 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATTTTGTTGATCTTCAATGTTTGATTGGGCCCCGGCCCCTTTTTGGGTGCGATTGTGGTGATGAAACTCAGTTTTTTGTTCGATTTTTTTCAGGATTCACTGATATTTGTCCTGCTCTTTCATCGGCTGTAATCGTCTTTGATGTATTGACGCGTTTGATCGCTCAATTTGATAATGACTTCAAGGTACCTGATTTTGGTTTCGGAGTCCTTTTCTTTATCTCTGTTTAGATTTTCTTGCGAATTGGTTTTTTCTTGTTGGATTGGTGTGAGCCGTTGAGGATTAGTGGAGAAATTCGTGAATATTTTCGATCTAGATTTTAAGAATGGACTGGTTTTTATTTGAGTCTCACTTAAGGTGTATCTGCTATGATGCTTTGAATCTTTTGTGGTTTTGATTGCTTAGAAATTCTCGTATGTGGTGGTTTATATGCTCTTGGATGATAGAATTTTGGAATGAATGACGATATGCAACGTTTTCTTTATGAAAAGGCAGGTTAATAGAAGAGAAATCTCAGATTTACTGAACAAAATACCTGGACCCTAGTAAAGTTCTGCCTTAGATTTCTTGTTTTGGATCATGATCCCTTATTGATCGCAGTGAATCCGGCCTCATATCCATAGTTAGCGGCGCATTCATCATAGTTAGAAGCTCCAACTCCATATCAAGGTCATGGTCGATATCAACACTATCATAAATATCGTCACTATCATCAATAAGAAAACCTTTAGGGTTGTTATTTGGGAACTTGTTCAGAAATACTATAATGAAAGGAAGATAGAAGTTTGTCACTAGGTATTTGACCAAATAGGATCGTGCTTATAGGATCATAGAATACATGGCTGTACAGGGAACGTCTATGCTATTATAGTCTCTGCAGGATTTTGAATGGTTGTCTAAGTTAATGCTTATGCTTAGTTGGTTAGCTTAGAATTTAAAATCAAAGATTAACTCTGGTGTTTCTTAAGTAGCTGGTGGTTACTTGGTATCAGTAGACGTGGGTACCCATACGTCGACATCGGATGAGTACATCTTTCAGTTATGGCTTCTTAATCTGATGTCTAATTCAGGCTCTGAGGGGTGTTTAGTAAGAGGAGATGTTTATTTCTTCAAATGGTTTCTGTTTCAAATAAACATAGACAACTGATAGGAATGGTATTAGGTTGGTTATGGATGTTATTAGAGTGTTTGGGTTATTAGCTCGAGGAGTTCGTTAGTAGGAGTCGATTTGGGCGAAGAGAAAGCTCGACAATTGCTTTGATGGTTTTGGCTGAGTGTGTATACTCAAAAGAGGGGAGGATCCAAACTCCAAGTACCTCAAATACTTGGATTATATTGTAGCTCTTCTATCTACTTTATTTCAATATTGTTCTAGTTGACTGGGTTCTATGAACATCAAAGCTACCTACTCCTTGTCAGTTTATAGTTTTCTCTCTACCATCTCTGTGAAATCCCACGTCCGTTGGGGAGGAGAACGAAGCATTCTTTATAAGGGTGTGGAAACTTCTCCCTGTCAGATGCGTTTTAAAAACCTCGAGAGGAAGTCCAAAAGGGAAAGCCCAAAGAGGGACAATATCTGCTAACGAACTGTTACAAATGGCATCAGAGCCAGACATCAGACGATGTGCCAGCAAGCAGATAGAGCCCCGAAGGGGGGTGGACACGAGGCGGTGTACCAGCAAGGATGCTAGGCCTCGAAAGGGGGTGGATTGGGGGCCCCACATCGATTGGAGAAGGGCGTGATTGCCAGCGAAGGCGCTGGGCACCGTATGGGGGTGGATTGTGAGATCCCACATCGGTTGGGGAGGAGAACGAAGCATTCTTTATAAGAGTGTGGAAACCTCTTCCTAGTAGACGCGTTTTAAAAACCTTGAGGAGAAACTCGAAAGGGAAAGCCCAAAGAGAACAATATATGCTAGCGGTGGGCTTGAGCTGTTATAATCTTGTTCTCTACTTTTTCCACTGATAAGAAAGTTAGTACATTATCTTCTTAATTTGTCCTTAGTACATCGTCTTCTTAATTTGTCCTTGTTATTTTCATCTGTCTAAATCGCTGTCCGTAAGTTCATTTTCGTTTTGTTTTCTGGTTCGCCGGACTTTCTTTATTTTATAAAACGTTCTTTTCGGTTTAGCCTTTATATTTGATCTCTACATTCCCATTACAAATGATACAAGTATTTGCCCAGTTATATCTGTCGAATTCTACTGATTTTTGGTACATTTTCCATCGTACATTGAAACATAGTTAGTCTTCTGAATTCTTCCTCGGTTTCTATTTTGTCTGGTTTCTTTCCTTACAATGGCTAGCAGTTGGAGAAGAACGGTTGGGAATGTCAGGTCCTTCATCGGCAACTCCATGGGCGGTCTCAGAGGCGGTACCAATCTTGCTTCCTGGGTAGTCGCTGGAACACTTGCCTACTTCCTCTGGGTCAAGCCCTCCCAAGACCTCAAACGCGAACAGCAAGAAAGAGCTGCTCTTGCAGCCACGGATCCTTATCGATACATCGAGAAGAGGAAACCTATTCCTGATCCCCAGGAGACTGGTTTGATATATGGCAACAAGAATAAACCTAAAAAATCAGAGGAGTAATCATCTATGGAGAGTGAAAACTTTGGAGAAATGTAACGGATTGCCCTTTATACACGGAAGGCGGTCGGTAATGTCGTTAGAAGCTAGAGCCTGGAACGACATGATTCTCTTATCACACTATGGATGTGAAGATTAAAAGGTGATAGATAGGGAATGTGTGTAGTTCAGTAAAGAGTTGTAGCCAAATCATTTGAAATGTTTTAGTGTAATAACCTTGAGAGCTGAAATTTGCAGAAGTTCTGTACTTCGTGTTTTGCTCTGATTATCTCAATGGGATTATCTGCCTGCCTGCTTGTATGTTTCTAGTGGAGGTGGAGGCCTCAACTTTCATGTGGCACTTAAAAGCAATAAACTAGTTATCAAGTCTTCTAAACGATCAAATTAT ATGAATTTTGTTGATCTTCAATGTTTGATTGGGCCCCGGCCCCTTTTTGGGTGCGATTGTGGATTCACTGATATTTGTCCTGCTCTTTCATCGGCTGTAATCGTCTTTGATGTATTGACGCGTTTGATCGCTCAATTTGATAATGACTTCAAGAATTTTGGAATGAATGACGATATGCAACGTTTTCTTTATGAAAAGGCAGCTGGTGGTTACTTGGTATCAGTAGACGTGGGTACCCATACGTCGACATCGGATGAGTACATCTTTCAGTTATGGCTTCTTAATCTGATGTCTAATTCAGGCTCTGAGGGTTGGAGAAGAACGGTTGGGAATGTCAGGTCCTTCATCGGCAACTCCATGGGCGGTCTCAGAGGCGGTACCAATCTTGCTTCCTGGGTAGTCGCTGGAACACTTGCCTACTTCCTCTGGGTCAAGCCCTCCCAAGACCTCAAACGCGAACAGCAAGAAAGAGCTGCTCTTGCAGCCACGGATCCTTATCGATACATCGAGAAGAGGAAACCTATTCCTGATCCCCAGGAGACTGGTTTGATATATGGCAACAAGAATAAACCTAAAAAATCAGAGGAGTAATCATCTATGGAGAGTGAAAACTTTGGAGAAATGTAACGGATTGCCCTTTATACACGGAAGGCGGTCGGTAATGTCGTTAGAAGCTAGAGCCTGGAACGACATGATTCTCTTATCACACTATGGATGTGAAGATTAAAAGGTGATAGATAGGGAATGTGTGTAGTTCAGTAAAGAGTTGTAGCCAAATCATTTGAAATGTTTTAGTGTAATAACCTTGAGAGCTGAAATTTGCAGAAGTTCTGTACTTCGTGTTTTGCTCTGATTATCTCAATGGGATTATCTGCCTGCCTGCTTGTATGTTTCTAGTGGAGGTGGAGGCCTCAACTTTCATGTGGCACTTAAAAGCAATAAACTAGTTATCAAGTCTTCTAAACGATCAAATTAT ATGAATTTTGTTGATCTTCAATGTTTGATTGGGCCCCGGCCCCTTTTTGGGTGCGATTGTGGATTCACTGATATTTGTCCTGCTCTTTCATCGGCTGTAATCGTCTTTGATGTATTGACGCGTTTGATCGCTCAATTTGATAATGACTTCAAGAATTTTGGAATGAATGACGATATGCAACGTTTTCTTTATGAAAAGGCAGCTGGTGGTTACTTGGTATCAGTAGACGTGGGTACCCATACGTCGACATCGGATGAGTACATCTTTCAGTTATGGCTTCTTAATCTGATGTCTAATTCAGGCTCTGAGGGTTGGAGAAGAACGGTTGGGAATGTCAGGTCCTTCATCGGCAACTCCATGGGCGGTCTCAGAGGCGGTACCAATCTTGCTTCCTGGGTAGTCGCTGGAACACTTGCCTACTTCCTCTGGGTCAAGCCCTCCCAAGACCTCAAACGCGAACAGCAAGAAAGAGCTGCTCTTGCAGCCACGGATCCTTATCGATACATCGAGAAGAGGAAACCTATTCCTGATCCCCAGGAGACTGGTTTGATATATGGCAACAAGAATAAACCTAAAAAATCAGAGGAGTAA MNFVDLQCLIGPRPLFGCDCGFTDICPALSSAVIVFDVLTRLIAQFDNDFKNFGMNDDMQRFLYEKAAGGYLVSVDVGTHTSTSDEYIFQLWLLNLMSNSGSEGWRRTVGNVRSFIGNSMGGLRGGTNLASWVVAGTLAYFLWVKPSQDLKREQQERAALAATDPYRYIEKRKPIPDPQETGLIYGNKNKPKKSEE Homology
BLAST of Carg13177 vs. NCBI nr
Match: KAG7031052.1 (hypothetical protein SDJN02_05091, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 404.8 bits (1039), Expect = 4.1e-109 Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0
BLAST of Carg13177 vs. NCBI nr
Match: KAG6600390.1 (hypothetical protein SDJN03_05623, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 188.3 bits (477), Expect = 6.1e-44 Identity = 91/95 (95.79%), Postives = 93/95 (97.89%), Query Frame = 0
BLAST of Carg13177 vs. NCBI nr
Match: XP_012073563.1 (uncharacterized protein LOC105635169 [Jatropha curcas] >KDP36738.1 hypothetical protein JCGZ_08029 [Jatropha curcas]) HSP 1 Score: 178.3 bits (451), Expect = 6.3e-41 Identity = 86/95 (90.53%), Postives = 89/95 (93.68%), Query Frame = 0
BLAST of Carg13177 vs. NCBI nr
Match: KAG5542701.1 (hypothetical protein RHGRI_015728 [Rhododendron griersonianum]) HSP 1 Score: 176.8 bits (447), Expect = 1.8e-40 Identity = 85/97 (87.63%), Postives = 91/97 (93.81%), Query Frame = 0
BLAST of Carg13177 vs. NCBI nr
Match: XP_004137209.1 (uncharacterized protein LOC101205325 isoform X1 [Cucumis sativus]) HSP 1 Score: 176.0 bits (445), Expect = 3.1e-40 Identity = 84/95 (88.42%), Postives = 89/95 (93.68%), Query Frame = 0
BLAST of Carg13177 vs. ExPASy TrEMBL
Match: A0A067KP46 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_08029 PE=4 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 3.1e-41 Identity = 86/95 (90.53%), Postives = 89/95 (93.68%), Query Frame = 0
BLAST of Carg13177 vs. ExPASy TrEMBL
Match: A0A0A0KZ01 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G089280 PE=4 SV=1) HSP 1 Score: 176.0 bits (445), Expect = 1.5e-40 Identity = 84/95 (88.42%), Postives = 89/95 (93.68%), Query Frame = 0
BLAST of Carg13177 vs. ExPASy TrEMBL
Match: A0A1S3BS24 (uncharacterized protein LOC103492913 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492913 PE=4 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 2.6e-40 Identity = 84/97 (86.60%), Postives = 89/97 (91.75%), Query Frame = 0
BLAST of Carg13177 vs. ExPASy TrEMBL
Match: A0A6J1DP57 (uncharacterized protein LOC111022900 OS=Momordica charantia OX=3673 GN=LOC111022900 PE=4 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 3.4e-40 Identity = 83/95 (87.37%), Postives = 89/95 (93.68%), Query Frame = 0
BLAST of Carg13177 vs. ExPASy TrEMBL
Match: A0A1S3BT82 (uncharacterized protein LOC103492913 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492913 PE=4 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 3.4e-40 Identity = 84/95 (88.42%), Postives = 88/95 (92.63%), Query Frame = 0
BLAST of Carg13177 vs. TAIR 10
Match: AT2G33585.1 (unknown protein; Has 31 Blast hits to 31 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 147.5 bits (371), Expect = 1.1e-35 Identity = 70/97 (72.16%), Postives = 81/97 (83.51%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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