Carg13163 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg13163
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Tubby-like F-box protein
Location	Carg_Chr04: 3059573 .. 3063962 (+)
RNA-Seq Expression	Carg13163
Synteny	Carg13163

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCATCTTTCGCGTTTCCTTCTTTCTCCTTTCCTCACGGCCCTGTCTCTCTAACATCTCCTCCCTTTCTCTCTCTCTGCGATTTTCCTTCTCATCTTCTGCCCTGTGTTTTCTCTCTCTAAGATCTGTCATCTTTCTCTCTCTCTTCTTTCACCATGTGAGTCTGAGCCCTAAAAACCAGCGGCCATGTCTCTTCGCAGATCGTTTCTCTCTCGGAGGTTTTCCTCAAAGTCGTTGTATAGAGTTCCAAATGGTGTAGGAGATGGAATTCTTCGAGTTGCTTCGTCGGAGGTCGAAGATGGCTCTGGTCAGCCCAGCGGTGGCCGGATGCAACCTGAATCTGCTTGGTCCTCCATGCTACCGGAGCTTCTTCGGGAGATCATTCAGCGGGTTGAGGCTTCTGAGGATAGTTGGCCTAACCGCCAGAACGTTGTTTCGTGTGCTTGTGTCTGTAAGCGTTGGCGGGATATTACTAAGGAGGTCGCCAGGGCCGCCCCTCTTTCCGGGAAAATTACTTTCCCTTCCTGCCTCAAACAGGTATTTCGTGGGATTTTGTATCGGTAGTCATCGATTTTGTTCTTGTTCTGATATTGGTTTTTGAAATTGGATGCAACTCGTTGTTGTTTGGAAGCATTTGCTTCTTCTCGTTCATATGATTCAGTTCTATCTTTTACGTGTTTTCGGTCTTAATTTATTTGAATTACTTTTCGAATTCAACCTGCTACGTATTTGGGATCGATGGATTGGTTTTTGAAAATGTGTTCGTGATTTCCGGGTGGAGTTTGAGGTAGTTGGCGGTTTTCGTTGATTGGTTGAGAATTCTATTTGTTCTCGATGGGGCAATTCCAGATATTTGTTGTATTGAATGATTAATGACATGGGCTTGTTGCATTGATTAACCGAAGTTTACAAATATTTTTTAAATTTTAAGGCTACCATAATTTTTAATTTCTTTCTGAATCTTATCAGAAAGCATAGTCCTATGAATTGGACAAACGTTAATGTATTTAGAATCCTGATGGTATAATTTAAATGTCCGAACGTTCATCTAAATATGTTAATGTCTAATGCAGCCTGGACCATGCGATCCTCCGCATCAGTGTCTTATAAAAAGGAACAAGAAGACTTCAACATTTTACCTTTATCTTGCCCTTGCACCATGTGAGTAACTTCTTGTGTATTTATTCAATTTGTAGAGGAAAAAGGGTAACAACACTGAGATTGGATCTAAGTACCATCCATTTTATGCCATATAACTTGGAATGAATGGCTTAGCTACCAGTATTTATGTTATTGTCTGACTTAAGAAAGGCCGAAGATTTTTTTTTTTTTTTTTTTTTTTTTTGTAGTCGAATTTATTGGTCTATGCATGCTCCTCTTTCCCCTTTATTCCCTAGGAAAAGAAATTAAATGAAATACATGTTTTTGCAACCCATGAACATGATGGACATTAATAAGAACTTAAAAAATCGTTTAAGTGGGCTCAACTCTTAATAAGGACTTGCACAATTACTGAACATAGATAATTTGATGGAGGGATATATCTTCTTTTGAATTTGGGCTCATAACGGAGTGGTATATCTTCTCTTGAGTTTGGGTCCAGGATCATATTTTTATTTGAACATTTCGTATGATAGTTTTCATTAAACAGTGAATCAACTTCAGCATTCTTTTGGGTTTTATGGTTTAAATACAACTGATGAGTACCAAGGTATAGAGAATGTAACACTTGAGCCTTGGGGGTGAATTTTGTTGTTATCTTTGTGTTTTGTAAATGGTTTTTCTTTTCTTGTTCTCTTAAACACTTATTTTGGTGGATGTAATACTTTTTCTTTTTGCAAGTTTTGGTTCATTTATCCACTGTCTTCTGATTTCTTATCCTTTTGTTTTCTTTGTATTTTTGTTACTTTATGTTTATTCCAAAGGGCCTGGTCAAGATTAGAAGTGTTTTTTGTCTTCTGTATAAGAATTCTTAGAGACTGGCATGAACAAATAACTAGGCTTATGTTTAACTTGAGTTAGGATTGATTACCATGTGGGTTACTTGGTTTGATTAATTTTTTTTCCCTCGCTCACATGAATGAATAATTGACTTTATGAGAAACACCCACCTTTTTAACCTAGGCATAACTCAATGGGTTAAGCTATTACAATTTTGACCAAAAGGTTGGTGATTCAAATCCCACCAAGAGAAATACCGACTTTGATTTTCTTTAACAAAACACAAAATAGAGATGACCAACTATGAATTGTAGTAAGATGTTCATGAATTTTACAGACTAAGAATTTTTTTAGTATTATTTTATACGTATGGTTCGTTGCATTTAAATTGCAACTTTTGTGTCCAGTGTATGACTTGGTGGCCACTGATGACTGACATGTCTTGCCTATCTGTTGTTTGTTATTTTCTTTTAGTAATGGAGGAATTTGTATATGTGGTATTAGCTGATTATGGTTTTTCCCTCCTACCTCTCCAGCATTTACAGATAAGGGAAAATTCCTCTTAGCTGCTCGAAGATATAGGCATGGATCTCATACTGAGTATATAATATCTCTTGATGGTGAAGACCTATCCCAAGGAAGCAATGCTTATGTGGGGAAGTTAAGGTAAGATATTGTTGTTTAGGAAATTTAAGACGGAACAAATTCTTTATTTTGGTGCATCATACTCTTTGCATCCTGCTTTATATGCTGCTTTCTTTTCTTTTGGATACTAATATACTAGGTTGGATATCTAATATACTAGGAGGCAAGCTAGTTTTTGATGGTGGGGATATCCATATATTCAGCCTGATCTTCTTGCTTTCCCACGAGGGACGCTGTCATTTTTTTTTTTTTGAGAATTACAAGAACCAAAACTATGAAACTTTGAATTATAGTGGGACAATTCTACCATGTCTATGTTTATGGGTCACTAGTTGTGGCATCTTCTTCTTCGTTTATTTATTTATTTAAAAAGAGCAATAATAACAATTAAGGGAACATCGGTGATCAAGAGACTTAAAAAAAAAAAAAAAAAAAAAGAATTCCTCCATGTGAAATAAGGGCATGTTTAAGAGTGATTTTGGAATGTCATGCCCAAGTGTAAGATGGACGCACGCCTCTATCCCCATCCTCATATTCTACCCCATTCTTGCCATTTTTCTCAAACAAGGGCTCTTAGAGCATTGAGTGAGCTATAAGGTGGGCCCTTCTTTTAGTTTTCCTCCCCTCTATTGTGGGCTCTCTTTTTGTTCGTCTTTGTACTCTTTTATTTTTCTCAATAAAAGCTCGGTTCATGATAAAAGAAAATAAAATAAGATACAGTTCTTGCTGAAAGATAATCCATGTCGATAGTTTGCAAAGAACTGCTTGATGCTACCACATGTTAGTCACTGTAGATATTTCACACCTAGACTTTGGGAGGATCATTAGTTAACAACTCTCTTTTCTCTTTTTCATTAATGTGCGAAAAATTATTTCATTGTGTTAGCTATAGGGAAATTTGCAGCTCGAAGTTTGTTGGTACAATTTGTAAACGTGGAAGTATGTCGTTTCCTTGTGTAATAAAATGCACTAAGTTGTTACCCCATTTTCTGAACCCTTTGCAGCTCCGATTTTCTTGGTACCAATTTTACAATTTATGATAGCCAGCCACCACATAACGGTGCAAAGCCATCGAGCAGTAAATCAAGCCGCCGCTTCGCAAGCAAGCAAATTAGCCCACAAGTTTCTGCGGGGAACTTTGAAGTTGGGCAAGTCTCTTACAAATTTAATCTTTTGAAATCAAGAGGCCCAAGGAGAATGATATGCTCTCTGAAGTGCCCAGTATCAGAAGACACTGGCACCAGCAAACCTTATGAGGACTCGAAGATGAAGAAATCCGAGTCCTTTTCTCCTTCATCTGGGTCGACAATCTTAAGAAACAAGGCCCCTAGATGGCATGAGCACCTGCAATGCTGGTGCTTGAATTTTCACGGTCGGGTGACGGTAGCATCCGTTAAAAACTTTCAACTTGTCGCTGCTGTTGACCATAGCCAGCCAGGAGTTAAAGGGGACGAAGAAACAGTCCTCCTACAGTTCGGAAAGGTAGGCGACGACACCTTTACTATGGATTATAGGCAGCCATTATCAGCTTTCCAGGCTTTCGCCATTTGCCTTACGAGCTTCGGCACGAAGTTGGCATGCGAGTAGTAGTATATTTTACCATTTTTTAAATTAAGAAACCAGGGCTTGATTGAGAAAAAAAAAATGGATTTTCTTGTACATGGTGCTATGATTGTGTAATTGGGACCAACTGAAAATGAAGTTGAGAGCAACAAAAACAATATTGTGGTGCTAGCAAGCACTGTGGCTTCTTTAACTCTATATGTATATGTAATATATAATTCAAAGGATGAGAATTGTTTATTC

mRNA sequence

GCATCTTTCGCGTTTCCTTCTTTCTCCTTTCCTCACGGCCCTGTCTCTCTAACATCTCCTCCCTTTCTCTCTCTCTGCGATTTTCCTTCTCATCTTCTGCCCTGTGTTTTCTCTCTCTAAGATCTGTCATCTTTCTCTCTCTCTTCTTTCACCATGTGAGTCTGAGCCCTAAAAACCAGCGGCCATGTCTCTTCGCAGATCGTTTCTCTCTCGGAGGTTTTCCTCAAAGTCGTTGTATAGAGTTCCAAATGGTGTAGGAGATGGAATTCTTCGAGTTGCTTCGTCGGAGGTCGAAGATGGCTCTGGTCAGCCCAGCGGTGGCCGGATGCAACCTGAATCTGCTTGGTCCTCCATGCTACCGGAGCTTCTTCGGGAGATCATTCAGCGGGTTGAGGCTTCTGAGGATAGTTGGCCTAACCGCCAGAACGTTGTTTCGTGTGCTTGTGTCTGTAAGCGTTGGCGGGATATTACTAAGGAGGTCGCCAGGGCCGCCCCTCTTTCCGGGAAAATTACTTTCCCTTCCTGCCTCAAACAGCCTGGACCATGCGATCCTCCGCATCAGTGTCTTATAAAAAGGAACAAGAAGACTTCAACATTTTACCTTTATCTTGCCCTTGCACCATCATTTACAGATAAGGGAAAATTCCTCTTAGCTGCTCGAAGATATAGGCATGGATCTCATACTGAGTATATAATATCTCTTGATGGTGAAGACCTATCCCAAGGAAGCAATGCTTATGTGGGGAAGTTAAGCTCCGATTTTCTTGGTACCAATTTTACAATTTATGATAGCCAGCCACCACATAACGGTGCAAAGCCATCGAGCAGTAAATCAAGCCGCCGCTTCGCAAGCAAGCAAATTAGCCCACAAGTTTCTGCGGGGAACTTTGAAGTTGGGCAAGTCTCTTACAAATTTAATCTTTTGAAATCAAGAGGCCCAAGGAGAATGATATGCTCTCTGAAGTGCCCAGTATCAGAAGACACTGGCACCAGCAAACCTTATGAGGACTCGAAGATGAAGAAATCCGAGTCCTTTTCTCCTTCATCTGGGTCGACAATCTTAAGAAACAAGGCCCCTAGATGGCATGAGCACCTGCAATGCTGGTGCTTGAATTTTCACGGTCGGGTGACGGTAGCATCCGTTAAAAACTTTCAACTTGTCGCTGCTGTTGACCATAGCCAGCCAGGAGTTAAAGGGGACGAAGAAACAGTCCTCCTACAGTTCGGAAAGGTAGGCGACGACACCTTTACTATGGATTATAGGCAGCCATTATCAGCTTTCCAGGCTTTCGCCATTTGCCTTACGAGCTTCGGCACGAAGTTGGCATGCGAGTAGTAGTATATTTTACCATTTTTTAAATTAAGAAACCAGGGCTTGATTGAGAAAAAAAAAATGGATTTTCTTGTACATGGTGCTATGATTGTGTAATTGGGACCAACTGAAAATGAAGTTGAGAGCAACAAAAACAATATTGTGGTGCTAGCAAGCACTGTGGCTTCTTTAACTCTATATGTATATGTAATATATAATTCAAAGGATGAGAATTGTTTATTC

Coding sequence (CDS)

ATGTCTCTTCGCAGATCGTTTCTCTCTCGGAGGTTTTCCTCAAAGTCGTTGTATAGAGTTCCAAATGGTGTAGGAGATGGAATTCTTCGAGTTGCTTCGTCGGAGGTCGAAGATGGCTCTGGTCAGCCCAGCGGTGGCCGGATGCAACCTGAATCTGCTTGGTCCTCCATGCTACCGGAGCTTCTTCGGGAGATCATTCAGCGGGTTGAGGCTTCTGAGGATAGTTGGCCTAACCGCCAGAACGTTGTTTCGTGTGCTTGTGTCTGTAAGCGTTGGCGGGATATTACTAAGGAGGTCGCCAGGGCCGCCCCTCTTTCCGGGAAAATTACTTTCCCTTCCTGCCTCAAACAGCCTGGACCATGCGATCCTCCGCATCAGTGTCTTATAAAAAGGAACAAGAAGACTTCAACATTTTACCTTTATCTTGCCCTTGCACCATCATTTACAGATAAGGGAAAATTCCTCTTAGCTGCTCGAAGATATAGGCATGGATCTCATACTGAGTATATAATATCTCTTGATGGTGAAGACCTATCCCAAGGAAGCAATGCTTATGTGGGGAAGTTAAGCTCCGATTTTCTTGGTACCAATTTTACAATTTATGATAGCCAGCCACCACATAACGGTGCAAAGCCATCGAGCAGTAAATCAAGCCGCCGCTTCGCAAGCAAGCAAATTAGCCCACAAGTTTCTGCGGGGAACTTTGAAGTTGGGCAAGTCTCTTACAAATTTAATCTTTTGAAATCAAGAGGCCCAAGGAGAATGATATGCTCTCTGAAGTGCCCAGTATCAGAAGACACTGGCACCAGCAAACCTTATGAGGACTCGAAGATGAAGAAATCCGAGTCCTTTTCTCCTTCATCTGGGTCGACAATCTTAAGAAACAAGGCCCCTAGATGGCATGAGCACCTGCAATGCTGGTGCTTGAATTTTCACGGTCGGGTGACGGTAGCATCCGTTAAAAACTTTCAACTTGTCGCTGCTGTTGACCATAGCCAGCCAGGAGTTAAAGGGGACGAAGAAACAGTCCTCCTACAGTTCGGAAAGGTAGGCGACGACACCTTTACTATGGATTATAGGCAGCCATTATCAGCTTTCCAGGCTTTCGCCATTTGCCTTACGAGCTTCGGCACGAAGTTGGCATGCGAGTAG

Protein sequence

MSLRRSFLSRRFSSKSLYRVPNGVGDGILRVASSEVEDGSGQPSGGRMQPESAWSSMLPELLREIIQRVEASEDSWPNRQNVVSCACVCKRWRDITKEVARAAPLSGKITFPSCLKQPGPCDPPHQCLIKRNKKTSTFYLYLALAPSFTDKGKFLLAARRYRHGSHTEYIISLDGEDLSQGSNAYVGKLSSDFLGTNFTIYDSQPPHNGAKPSSSKSSRRFASKQISPQVSAGNFEVGQVSYKFNLLKSRGPRRMICSLKCPVSEDTGTSKPYEDSKMKKSESFSPSSGSTILRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVAAVDHSQPGVKGDEETVLLQFGKVGDDTFTMDYRQPLSAFQAFAICLTSFGTKLACE

Homology

[Close]

BLAST of Carg13163 vs. NCBI nr
Match: KAG7031066.1 (Tubby-like F-box protein 7 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 779.6 bits (2012), Expect = 1.2e-221
Identity = 383/383 (100.00%), Postives = 383/383 (100.00%), Query Frame = 0


Query: 1   MSLRRSFLSRRFSSKSLYRVPNGVGDGILRVASSEVEDGSGQPSGGRMQPESAWSSMLPE 60
           MSLRRSFLSRRFSSKSLYRVPNGVGDGILRVASSEVEDGSGQPSGGRMQPESAWSSMLPE
Sbjct: 1   MSLRRSFLSRRFSSKSLYRVPNGVGDGILRVASSEVEDGSGQPSGGRMQPESAWSSMLPE 60

Query: 61  LLREIIQRVEASEDSWPNRQNVVSCACVCKRWRDITKEVARAAPLSGKITFPSCLKQPGP 120
           LLREIIQRVEASEDSWPNRQNVVSCACVCKRWRDITKEVARAAPLSGKITFPSCLKQPGP
Sbjct: 61  LLREIIQRVEASEDSWPNRQNVVSCACVCKRWRDITKEVARAAPLSGKITFPSCLKQPGP 120

Query: 121 CDPPHQCLIKRNKKTSTFYLYLALAPSFTDKGKFLLAARRYRHGSHTEYIISLDGEDLSQ 180
           CDPPHQCLIKRNKKTSTFYLYLALAPSFTDKGKFLLAARRYRHGSHTEYIISLDGEDLSQ
Sbjct: 121 CDPPHQCLIKRNKKTSTFYLYLALAPSFTDKGKFLLAARRYRHGSHTEYIISLDGEDLSQ 180

Query: 181 GSNAYVGKLSSDFLGTNFTIYDSQPPHNGAKPSSSKSSRRFASKQISPQVSAGNFEVGQV 240
           GSNAYVGKLSSDFLGTNFTIYDSQPPHNGAKPSSSKSSRRFASKQISPQVSAGNFEVGQV
Sbjct: 181 GSNAYVGKLSSDFLGTNFTIYDSQPPHNGAKPSSSKSSRRFASKQISPQVSAGNFEVGQV 240

Query: 241 SYKFNLLKSRGPRRMICSLKCPVSEDTGTSKPYEDSKMKKSESFSPSSGSTILRNKAPRW 300
           SYKFNLLKSRGPRRMICSLKCPVSEDTGTSKPYEDSKMKKSESFSPSSGSTILRNKAPRW
Sbjct: 241 SYKFNLLKSRGPRRMICSLKCPVSEDTGTSKPYEDSKMKKSESFSPSSGSTILRNKAPRW 300

Query: 301 HEHLQCWCLNFHGRVTVASVKNFQLVAAVDHSQPGVKGDEETVLLQFGKVGDDTFTMDYR 360
           HEHLQCWCLNFHGRVTVASVKNFQLVAAVDHSQPGVKGDEETVLLQFGKVGDDTFTMDYR
Sbjct: 301 HEHLQCWCLNFHGRVTVASVKNFQLVAAVDHSQPGVKGDEETVLLQFGKVGDDTFTMDYR 360

Query: 361 QPLSAFQAFAICLTSFGTKLACE 384
           QPLSAFQAFAICLTSFGTKLACE
Sbjct: 361 QPLSAFQAFAICLTSFGTKLACE 383

[Close]

BLAST of Carg13163 vs. NCBI nr
Match: XP_022942880.1 (tubby-like F-box protein 7 [Cucurbita moschata] >XP_022942881.1 tubby-like F-box protein 7 [Cucurbita moschata])

HSP 1 Score: 779.2 bits (2011), Expect = 1.6e-221
Identity = 382/383 (99.74%), Postives = 383/383 (100.00%), Query Frame = 0


Query: 1   MSLRRSFLSRRFSSKSLYRVPNGVGDGILRVASSEVEDGSGQPSGGRMQPESAWSSMLPE 60
           MSLRRSFLSRRFSSKSLYRVPNGVGDGILRVASSEVEDGSGQPSGGRMQPESAWSSMLPE
Sbjct: 1   MSLRRSFLSRRFSSKSLYRVPNGVGDGILRVASSEVEDGSGQPSGGRMQPESAWSSMLPE 60

Query: 61  LLREIIQRVEASEDSWPNRQNVVSCACVCKRWRDITKEVARAAPLSGKITFPSCLKQPGP 120
           LLREIIQRVEASEDSWPNRQNVVSCACVCKRWRDITKEVARAAPLSGKITFPSCLKQPGP
Sbjct: 61  LLREIIQRVEASEDSWPNRQNVVSCACVCKRWRDITKEVARAAPLSGKITFPSCLKQPGP 120

Query: 121 CDPPHQCLIKRNKKTSTFYLYLALAPSFTDKGKFLLAARRYRHGSHTEYIISLDGEDLSQ 180
           CDPPHQCLIKRNKKTSTFYLYLALAPSFTDKGKFLLAARRYRHGSHTEYIISLDGEDLSQ
Sbjct: 121 CDPPHQCLIKRNKKTSTFYLYLALAPSFTDKGKFLLAARRYRHGSHTEYIISLDGEDLSQ 180

Query: 181 GSNAYVGKLSSDFLGTNFTIYDSQPPHNGAKPSSSKSSRRFASKQISPQVSAGNFEVGQV 240
           GSNAYVGKLSSDFLGTNFTIYDSQPPHNGAKPSSSKSSRRFASKQISPQVSAGNFE+GQV
Sbjct: 181 GSNAYVGKLSSDFLGTNFTIYDSQPPHNGAKPSSSKSSRRFASKQISPQVSAGNFEIGQV 240

Query: 241 SYKFNLLKSRGPRRMICSLKCPVSEDTGTSKPYEDSKMKKSESFSPSSGSTILRNKAPRW 300
           SYKFNLLKSRGPRRMICSLKCPVSEDTGTSKPYEDSKMKKSESFSPSSGSTILRNKAPRW
Sbjct: 241 SYKFNLLKSRGPRRMICSLKCPVSEDTGTSKPYEDSKMKKSESFSPSSGSTILRNKAPRW 300

Query: 301 HEHLQCWCLNFHGRVTVASVKNFQLVAAVDHSQPGVKGDEETVLLQFGKVGDDTFTMDYR 360
           HEHLQCWCLNFHGRVTVASVKNFQLVAAVDHSQPGVKGDEETVLLQFGKVGDDTFTMDYR
Sbjct: 301 HEHLQCWCLNFHGRVTVASVKNFQLVAAVDHSQPGVKGDEETVLLQFGKVGDDTFTMDYR 360

Query: 361 QPLSAFQAFAICLTSFGTKLACE 384
           QPLSAFQAFAICLTSFGTKLACE
Sbjct: 361 QPLSAFQAFAICLTSFGTKLACE 383

[Close]

BLAST of Carg13163 vs. NCBI nr
Match: KAG6600404.1 (Tubby-like F-box protein 7, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 777.7 bits (2007), Expect = 4.6e-221
Identity = 382/383 (99.74%), Postives = 382/383 (99.74%), Query Frame = 0


Query: 1   MSLRRSFLSRRFSSKSLYRVPNGVGDGILRVASSEVEDGSGQPSGGRMQPESAWSSMLPE 60
           MSLRRSFLSRRFSSKSLYRVPNGVGDGILRVASSEVEDGSGQPSGGRMQPESAWSSMLPE
Sbjct: 1   MSLRRSFLSRRFSSKSLYRVPNGVGDGILRVASSEVEDGSGQPSGGRMQPESAWSSMLPE 60

Query: 61  LLREIIQRVEASEDSWPNRQNVVSCACVCKRWRDITKEVARAAPLSGKITFPSCLKQPGP 120
           LLREIIQRVEASEDSWPNRQNVVSCACVCKRWRDITKEVARAAPLSGKITFPSCLKQPGP
Sbjct: 61  LLREIIQRVEASEDSWPNRQNVVSCACVCKRWRDITKEVARAAPLSGKITFPSCLKQPGP 120

Query: 121 CDPPHQCLIKRNKKTSTFYLYLALAPSFTDKGKFLLAARRYRHGSHTEYIISLDGEDLSQ 180
           CDPPHQCLIKRNKKTSTFYLYLALAPSFTDKGKFLLAARRYRHGSHTEYIISLDGEDLSQ
Sbjct: 121 CDPPHQCLIKRNKKTSTFYLYLALAPSFTDKGKFLLAARRYRHGSHTEYIISLDGEDLSQ 180

Query: 181 GSNAYVGKLSSDFLGTNFTIYDSQPPHNGAKPSSSKSSRRFASKQISPQVSAGNFEVGQV 240
           GSNAYVGKLSSDFLGTNFTIYDSQPPHNGAKPSSSKSSRRFASKQISPQVSAGNFEVGQV
Sbjct: 181 GSNAYVGKLSSDFLGTNFTIYDSQPPHNGAKPSSSKSSRRFASKQISPQVSAGNFEVGQV 240

Query: 241 SYKFNLLKSRGPRRMICSLKCPVSEDTGTSKPYEDSKMKKSESFSPSSGSTILRNKAPRW 300
           SYKFNLLKSRGPRRMICSLKCPVSEDTGTSKPYEDSKMKKSESFSPSSGSTILRNKAPRW
Sbjct: 241 SYKFNLLKSRGPRRMICSLKCPVSEDTGTSKPYEDSKMKKSESFSPSSGSTILRNKAPRW 300

Query: 301 HEHLQCWCLNFHGRVTVASVKNFQLVAAVDHSQPGVKGDEETVLLQFGKVGDDTFTMDYR 360
           HEHLQCWCLNFHGRVTVASVKNFQLVAA DHSQPGVKGDEETVLLQFGKVGDDTFTMDYR
Sbjct: 301 HEHLQCWCLNFHGRVTVASVKNFQLVAAFDHSQPGVKGDEETVLLQFGKVGDDTFTMDYR 360

Query: 361 QPLSAFQAFAICLTSFGTKLACE 384
           QPLSAFQAFAICLTSFGTKLACE
Sbjct: 361 QPLSAFQAFAICLTSFGTKLACE 383

[Close]

BLAST of Carg13163 vs. NCBI nr
Match: XP_023554773.1 (tubby-like F-box protein 7 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 775.4 bits (2001), Expect = 2.3e-220
Identity = 381/383 (99.48%), Postives = 382/383 (99.74%), Query Frame = 0


Query: 1   MSLRRSFLSRRFSSKSLYRVPNGVGDGILRVASSEVEDGSGQPSGGRMQPESAWSSMLPE 60
           MSLRRSFLSRRFSSKSLYRVPNGVGDGILRVASSEVEDGSGQPSGGRMQ ESAWSSMLPE
Sbjct: 1   MSLRRSFLSRRFSSKSLYRVPNGVGDGILRVASSEVEDGSGQPSGGRMQSESAWSSMLPE 60

Query: 61  LLREIIQRVEASEDSWPNRQNVVSCACVCKRWRDITKEVARAAPLSGKITFPSCLKQPGP 120
           LLREIIQRVEASEDSWPNRQNVVSCACVCKRWRDITKEVARAAPLSGKITFPSCLKQPGP
Sbjct: 61  LLREIIQRVEASEDSWPNRQNVVSCACVCKRWRDITKEVARAAPLSGKITFPSCLKQPGP 120

Query: 121 CDPPHQCLIKRNKKTSTFYLYLALAPSFTDKGKFLLAARRYRHGSHTEYIISLDGEDLSQ 180
           CDPPHQCLIKRNKKTSTFYLYLALAPSFTDKGKFLLAARRYRHGSHTEYIISLDGEDLSQ
Sbjct: 121 CDPPHQCLIKRNKKTSTFYLYLALAPSFTDKGKFLLAARRYRHGSHTEYIISLDGEDLSQ 180

Query: 181 GSNAYVGKLSSDFLGTNFTIYDSQPPHNGAKPSSSKSSRRFASKQISPQVSAGNFEVGQV 240
           GSNAY+GKLSSDFLGTNFTIYDSQPPHNGAKPSSSKSSRRFASKQISPQVSAGNFEVGQV
Sbjct: 181 GSNAYLGKLSSDFLGTNFTIYDSQPPHNGAKPSSSKSSRRFASKQISPQVSAGNFEVGQV 240

Query: 241 SYKFNLLKSRGPRRMICSLKCPVSEDTGTSKPYEDSKMKKSESFSPSSGSTILRNKAPRW 300
           SYKFNLLKSRGPRRMICSLKCPVSEDTGTSKPYEDSKMKKSESFSPSSGSTILRNKAPRW
Sbjct: 241 SYKFNLLKSRGPRRMICSLKCPVSEDTGTSKPYEDSKMKKSESFSPSSGSTILRNKAPRW 300

Query: 301 HEHLQCWCLNFHGRVTVASVKNFQLVAAVDHSQPGVKGDEETVLLQFGKVGDDTFTMDYR 360
           HEHLQCWCLNFHGRVTVASVKNFQLVAAVDHSQPGVKGDEETVLLQFGKVGDDTFTMDYR
Sbjct: 301 HEHLQCWCLNFHGRVTVASVKNFQLVAAVDHSQPGVKGDEETVLLQFGKVGDDTFTMDYR 360

Query: 361 QPLSAFQAFAICLTSFGTKLACE 384
           QPLSAFQAFAICLTSFGTKLACE
Sbjct: 361 QPLSAFQAFAICLTSFGTKLACE 383

[Close]

BLAST of Carg13163 vs. NCBI nr
Match: XP_022981364.1 (tubby-like F-box protein 7 [Cucurbita maxima] >XP_022981373.1 tubby-like F-box protein 7 [Cucurbita maxima] >XP_022981381.1 tubby-like F-box protein 7 [Cucurbita maxima])

HSP 1 Score: 770.0 bits (1987), Expect = 9.6e-219
Identity = 381/384 (99.22%), Postives = 382/384 (99.48%), Query Frame = 0


Query: 1   MSLRRSFLSRRFSSKSLYRVPNGVGDGILRVASSEVEDGSGQPSGGRMQPESAWSSMLPE 60
           MSLRRSFLSRRFSSKSLYRVPNGVGDGILRVASSEVEDGSGQ SGGRMQPESAWSSMLPE
Sbjct: 1   MSLRRSFLSRRFSSKSLYRVPNGVGDGILRVASSEVEDGSGQLSGGRMQPESAWSSMLPE 60

Query: 61  LLREIIQRVEASEDSWPNRQNVVSCACVCKRWRDITKEVARAAPLSGKITFPSCLKQPGP 120
           LLREIIQRVEASEDSWPNRQNVVSCACVCKRWRDITKEVARAAPLSGKITFPSCLKQPGP
Sbjct: 61  LLREIIQRVEASEDSWPNRQNVVSCACVCKRWRDITKEVARAAPLSGKITFPSCLKQPGP 120

Query: 121 CDPPHQCLIKRNKKTSTFYLYLALAPSFTDKGKFLLAARRYRHGSHTEYIISLDGEDLSQ 180
           CDPPHQCLIKRNKKTSTFYLYLALAPSFTDKGKFLLAARRYRHGSHTEYIISLDGEDLSQ
Sbjct: 121 CDPPHQCLIKRNKKTSTFYLYLALAPSFTDKGKFLLAARRYRHGSHTEYIISLDGEDLSQ 180

Query: 181 GSNAYVGKLSSDFLGTNFTIYDSQPPHNGAKPSSSKSSRRFASKQISPQVSAGNFEVGQV 240
           GSNAYVGKLSSDFLGTNFTIYDSQPPHNGAKPSSSKSSRRFASKQISPQVSAGNFEVGQV
Sbjct: 181 GSNAYVGKLSSDFLGTNFTIYDSQPPHNGAKPSSSKSSRRFASKQISPQVSAGNFEVGQV 240

Query: 241 SYKFNLLKSRGPRRMICSLKCPVSEDTGTSKPYEDSKMKKSESFSPSSGSTILRNKAPRW 300
           SYKFNLLKSRGPRRMICSLKCPVSEDTGTSKPY+DSKMKKSESFSPSSGSTILRNKAPRW
Sbjct: 241 SYKFNLLKSRGPRRMICSLKCPVSEDTGTSKPYDDSKMKKSESFSPSSGSTILRNKAPRW 300

Query: 301 HEHLQCWCLNFHGRVTVASVKNFQLVAAVDHSQP-GVKGDEETVLLQFGKVGDDTFTMDY 360
           HEHLQCWCLNFHGRVTVASVKNFQLVAAVDHSQP GVKGDEETVLLQFGKVGDDTFTMDY
Sbjct: 301 HEHLQCWCLNFHGRVTVASVKNFQLVAAVDHSQPGGVKGDEETVLLQFGKVGDDTFTMDY 360

Query: 361 RQPLSAFQAFAICLTSFGTKLACE 384
           RQPLSAFQAFAICLTSFGTKLACE
Sbjct: 361 RQPLSAFQAFAICLTSFGTKLACE 384

[Close]

BLAST of Carg13163 vs. ExPASy Swiss-Prot
Match: Q93VI8 (Tubby-like F-box protein 7 OS=Arabidopsis thaliana OX=3702 GN=TULP7 PE=2 SV=1)

HSP 1 Score: 533.1 bits (1372), Expect = 2.6e-150
Identity = 273/390 (70.00%), Postives = 308/390 (78.97%), Query Frame = 0


Query: 1   MSLRRSFLSRRFSSKSLYRVPNGVGDGILRVASSEVEDGSGQPSGGRMQPESAWSSMLPE 60
           M L RS LSRR S+   +R   G         ++   +    P    M   S+WS+MLPE
Sbjct: 1   MPLSRSLLSRRISNS--FRFHQG--------ETTTAPESESIPPPSNMAGSSSWSAMLPE 60

Query: 61  LLREIIQRVEASEDSWPNRQNVVSCACVCKRWRDITKEVARAAPLSGKITFPSCLKQPGP 120
           LL EII+RVE +ED WP R++VV+CACV K+WR+IT + AR++  SGKITFPSCLK PGP
Sbjct: 61  LLGEIIRRVEETEDRWPQRRDVVTCACVSKKWREITHDFARSSLNSGKITFPSCLKLPGP 120

Query: 121 CDPPHQCLIKRNKKTSTFYLYLALAPSFTDKGKFLLAARRYRHGSHTEYIISLDGEDLSQ 180
            D  +QCLIKRNKKTSTFYLYLAL PSFTDKGKFLLAARR+R G++TEYIISLD +D SQ
Sbjct: 121 RDFSNQCLIKRNKKTSTFYLYLALTPSFTDKGKFLLAARRFRTGAYTEYIISLDADDFSQ 180

Query: 181 GSNAYVGKLSSDFLGTNFTIYDSQPPHNGAKPSSSKSSRRFASKQISPQVSAGNFEVGQV 240
           GSNAYVGKL SDFLGTNFT+YDSQPPHNGAKPS+ K+SRRFASKQISPQV AGNFEVG V
Sbjct: 181 GSNAYVGKLRSDFLGTNFTVYDSQPPHNGAKPSNGKASRRFASKQISPQVPAGNFEVGHV 240

Query: 241 SYKFNLLKSRGPRRMICSLKCPVSEDTGTS-------KPYEDSKMKKSESFSPSSGSTIL 300
           SYKFNLLKSRGPRRM+ +L+CP    + +S       KP + +K+ K  +    S  TIL
Sbjct: 241 SYKFNLLKSRGPRRMVSTLRCPSPSPSSSSAGLSSDQKPCDVTKIMKKPN-KDGSSLTIL 300

Query: 301 RNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVAAVDHSQPGVKGDEETVLLQFGKVGDD 360
           +NKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVA VD SQP  KGDEETVLLQFGKVGDD
Sbjct: 301 KNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVATVDQSQPSGKGDEETVLLQFGKVGDD 360

Query: 361 TFTMDYRQPLSAFQAFAICLTSFGTKLACE 384
           TFTMDYRQPLSAFQAFAICLTSFGTKLACE
Sbjct: 361 TFTMDYRQPLSAFQAFAICLTSFGTKLACE 379

[Close]

BLAST of Carg13163 vs. ExPASy Swiss-Prot
Match: Q5QM27 (Tubby-like F-box protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=TULP1 PE=2 SV=1)

HSP 1 Score: 474.6 bits (1220), Expect = 1.1e-132
Identity = 237/350 (67.71%), Postives = 276/350 (78.86%), Query Frame = 0


Query: 35  EVEDGSGQPSGGRMQPESAWSSMLPELLREIIQRVEAS-EDSWPNRQNVVSCACVCKRWR 94
           E EDG  +        E  W+ +LPEL+ E+++RVEAS  + WP R++VVSCACVC+RWR
Sbjct: 21  EGEDGQAE------DQEERWARLLPELMSEVVRRVEASGGERWPARKDVVSCACVCRRWR 80

Query: 95  DITKEVARAAPLSGKITFPSCLKQPGPCDPPHQCLIKRNKKTSTFYLYLALAPSFTDKGK 154
           D    V R    SGKITFPS LKQPGP + P QC IKRNKK STFYLYL L  +  DKGK
Sbjct: 81  DAAVAVVRPPAESGKITFPSSLKQPGPREFPMQCFIKRNKKNSTFYLYLGLTNATVDKGK 140

Query: 155 FLLAARRYRHGSHTEYIISLDGEDLSQGSNAYVGKLSSDFLGTNFTIYDSQPPHNGAKPS 214
           FL+AARR+R G HTEYI+SLD +DLSQGSNAY+GKL SDF GTNF IYDS+PP++GAK S
Sbjct: 141 FLMAARRFRRGPHTEYIVSLDADDLSQGSNAYMGKLRSDFWGTNFKIYDSKPPYDGAKAS 200

Query: 215 SSKSSRRFASKQISPQVSAGNFEVGQVSYKFNLLKSRGPRRMICSLKCPVSEDTGTSKPY 274
           SS+SSRRF S++ISPQVSAGN+EVGQVSYK+NLLKSRGPRRM C+L+CP +++T     +
Sbjct: 201 SSRSSRRFGSRRISPQVSAGNYEVGQVSYKYNLLKSRGPRRMYCALECPSTQET-----W 260

Query: 275 EDSKMKKSESFSPSSGSTILRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVAAVDHSQ 334
           E+    K   F   +G+T+LRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVAA D + 
Sbjct: 261 ENCLKTK---FRKPTGNTVLRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVAAADPND 320

Query: 335 PGVKGDEETVLLQFGKVGDDTFTMDYRQPLSAFQAFAICLTSFGTKLACE 384
           P    DEETVLLQFGKV D+ FTMDYRQPLSAFQAFAI L+SFGTKLACE
Sbjct: 321 PASSKDEETVLLQFGKVDDNIFTMDYRQPLSAFQAFAISLSSFGTKLACE 356

[Close]

BLAST of Carg13163 vs. ExPASy Swiss-Prot
Match: Q68Y48 (Tubby-like F-box protein 9 OS=Oryza sativa subsp. japonica OX=39947 GN=TULP9 PE=2 SV=1)

HSP 1 Score: 473.0 bits (1216), Expect = 3.2e-132
Identity = 242/370 (65.41%), Postives = 278/370 (75.14%), Query Frame = 0


Query: 16  SLYRVPNGVGDGILRVASSEVEDGSGQPSGGRMQ--PESAWSSMLPELLREIIQRVEASE 75
           S+ R   GVG G  +V S E+   SG    G  +   E  WS +LPELL EI++RV+A  
Sbjct: 13  SVSRSSGGVGGGESKV-SPEIAPVSGGEGEGEEEEGEEERWSRLLPELLTEIMRRVDAGA 72

Query: 76  DSWPNRQNVVSCACVCKRWRDITKEVARAAPLSGKITFPSCLKQPGPCDPPHQCLIKRNK 135
           + WP R++VV+CACVC+RWRD    V R     G+ITFPS LKQPGP D P  C I+RNK
Sbjct: 73  ERWPPRRDVVACACVCRRWRDAAVSVVRPPLECGRITFPSSLKQPGPRDAPMHCFIRRNK 132

Query: 136 KTSTFYLYLALAPSFTDKGKFLLAARRYRHGSHTEYIISLDGEDLSQGSNAYVGKLSSDF 195
           K STFYLYL+L  + TDKGKFLLAARR+R+G+HTEYIIS D +DL  GSN+YVGKL SDF
Sbjct: 133 KNSTFYLYLSLTQALTDKGKFLLAARRFRNGAHTEYIISYDCDDLFPGSNSYVGKLRSDF 192

Query: 196 LGTNFTIYDSQPPHNGAKPSSSKSSRRFASKQISPQVSAGNFEVGQVSYKFNLLKSRGPR 255
           LGT F IYDSQPP++GAKPS S+SSRRFASKQI+P VS GN+EVGQVSYKFN LKSRGPR
Sbjct: 193 LGTKFIIYDSQPPYDGAKPSRSQSSRRFASKQINPNVSGGNYEVGQVSYKFNFLKSRGPR 252

Query: 256 RMICSLKCPVSEDTGTSKPYEDSKMKKSESFSPSSGSTILRNKAPRWHEHLQCWCLNFHG 315
           RM C+++CPV + T +        +KK  S   +S    LRNKAPRWHEHLQCWCLNFHG
Sbjct: 253 RMQCNIQCPVGQSTAS------DPLKKLIS---TSSPLALRNKAPRWHEHLQCWCLNFHG 312

Query: 316 RVTVASVKNFQLVAAVDHSQPGVKGDEETVLLQFGKVGDDTFTMDYRQPLSAFQAFAICL 375
           RVTVASVKNFQLVA    S P    DEETV+LQFGK+ DD FTMDYRQPLSAFQAFAICL
Sbjct: 313 RVTVASVKNFQLVAPAGTSDPWGIADEETVILQFGKIEDDAFTMDYRQPLSAFQAFAICL 372

Query: 376 TSFGTKLACE 384
           TSFGTKLACE
Sbjct: 373 TSFGTKLACE 372

[Close]

BLAST of Carg13163 vs. ExPASy Swiss-Prot
Match: Q688Y7 (Tubby-like F-box protein 10 OS=Oryza sativa subsp. japonica OX=39947 GN=TULP10 PE=2 SV=1)

HSP 1 Score: 459.9 bits (1182), Expect = 2.8e-128
Identity = 226/345 (65.51%), Postives = 269/345 (77.97%), Query Frame = 0


Query: 46  GRMQPESAWSSMLPELLREIIQRVEAS-EDSWPNRQNVVSCACVCKRWRDITKEVARAAP 105
           G  + E  W  +LPEL+ E+++RVEAS  + WP R+++VSCACVC+RWR+    V R  P
Sbjct: 16  GEGEEEGRWGGLLPELVEEVVRRVEASGGERWPARKDLVSCACVCRRWREAAAAVVRPLP 75

Query: 106 LSGKITFPSCLKQPGPCDPPHQCLIKRNKKTSTFYLYLALAPSFTDKGKFLLAARRYRHG 165
            SG+ITFPS LKQPGP D P QC +KRNKK S FYLYL L     DKGKFL+AARR+R G
Sbjct: 76  ESGRITFPSSLKQPGPKDFPIQCFVKRNKKKSMFYLYLGLLNGTMDKGKFLMAARRFRRG 135

Query: 166 SHTEYIISLDGEDLSQGSNAYVGKLSSDFLGTNFTIYDSQPPHNGAKPSSSKSSR----- 225
            HTEY+ISLD +DLSQGSNAYVGKL SDF GTNF IYD+QPP++ AK SS++SS+     
Sbjct: 136 PHTEYVISLDADDLSQGSNAYVGKLRSDFWGTNFKIYDNQPPYDDAKTSSTRSSQRFGST 195

Query: 226 -RFASKQISPQVSAGNFEVGQVSYKFNLLKSRGPRRMICSLKCPVSEDTGTSKPYEDSKM 285
            RF S++I PQ+SAGNF VGQ+SYK+NLLKSRGPRRM C+++CP +++T     +E+S  
Sbjct: 196 HRFGSRRICPQISAGNFNVGQISYKYNLLKSRGPRRMFCTMECPSTQET-----WENSLK 255

Query: 286 KKSESFSPSSGSTILRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVAAVDHSQPGVKG 345
            KS      +G+T+LRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVA  D S P   G
Sbjct: 256 TKS---LRCTGTTVLRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVATADPSHPDSVG 315

Query: 346 DEETVLLQFGKVGDDTFTMDYRQPLSAFQAFAICLTSFGTKLACE 384
           DEETV+LQFGKV  + FTMDYRQPLSAFQAFAICL+SFGTKLACE
Sbjct: 316 DEETVILQFGKVDSNIFTMDYRQPLSAFQAFAICLSSFGTKLACE 352

[Close]

BLAST of Carg13163 vs. ExPASy Swiss-Prot
Match: Q94DT9 (Tubby-like F-box protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=TULP2 PE=2 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 2.3e-106
Identity = 204/378 (53.97%), Postives = 254/378 (67.20%), Query Frame = 0


Query: 4   RRSFLSRRFSSKSLYRVPNGVGDGILRVASSEVEDGSGQPSGGRMQPESAWSSMLPELLR 63
           RRS  S    S    R P      +    SSE+   +G+   G    E  WS+++P+LL 
Sbjct: 5   RRSSSSSSAPSSRPARRPARTNARVSPDVSSELSPLAGEEGAG----EERWSALVPDLLA 64

Query: 64  EIIQRVEASEDSWPNRQNVVSCACVCKRWRDITKEVARAAPLSGKITFPSCLKQPGPCDP 123
           +I++ VEA  + WP R++VV+CA VC+RWRD+   V +    SGKITFPS LKQPGP D 
Sbjct: 65  DILRCVEAGSERWPPRRDVVACASVCRRWRDVAVAVVQPPLESGKITFPSSLKQPGPRDA 124

Query: 124 PHQCLIKRNKKTSTFYLYLALAPSFTDKGKFLLAARRYRHGSHTEYIISLDGEDLSQGSN 183
           P QC IKRNKK STF+LYL L    TD  KFLLAARR R G H EY I+++ + L  GS 
Sbjct: 125 PMQCFIKRNKKNSTFFLYLGLTQELTDDEKFLLAARRCRRGLHKEYAITINSDGLFHGSQ 184

Query: 184 AYVGKLSSDFLGTNFTIYDSQPPHNGAKPSSSKSSRRFASKQISPQVSAGNFEVGQVSYK 243
           + VG L S+F GT FTI D QPP+ GAK  SS+S R F +K   P VS G+ EVG+VSYK
Sbjct: 185 SCVGNLKSNFTGTKFTIRDWQPPYEGAKAFSSRSGRWFGNKHRCPLVSTGDVEVGEVSYK 244

Query: 244 FNLLKSRGPRRMICSLKCPVSEDTGTSKPYEDSKMKKSESFSPSSGSTILRNKAPRWHEH 303
           ++LL+ RGPRRM CS++CPV + T    P +  ++  S    PS  S +L +K P WHEH
Sbjct: 245 YSLLRPRGPRRMSCSVQCPVLKGTAVD-PQDGKRLSNS---IPS--SLVLNSKVPSWHEH 304

Query: 304 LQCWCLNFHGRVTVASVKNFQLVAAVDHSQPGVKGDEETVLLQFGKVGDDTFTMDYRQPL 363
           LQCWCLNFHGRV VASVKNFQL+A V+  +P     ++TV+LQFGK+ DD FTMDYRQPL
Sbjct: 305 LQCWCLNFHGRVMVASVKNFQLIAPVEPGEP----SDKTVVLQFGKIDDDVFTMDYRQPL 364

Query: 364 SAFQAFAICLTSFGTKLA 382
           SAFQAFAICL++FGTKLA
Sbjct: 365 SAFQAFAICLSNFGTKLA 368

[Close]

BLAST of Carg13163 vs. ExPASy TrEMBL
Match: A0A6J1FQ64 (Tubby-like F-box protein OS=Cucurbita moschata OX=3662 GN=LOC111447778 PE=3 SV=1)

HSP 1 Score: 779.2 bits (2011), Expect = 7.7e-222
Identity = 382/383 (99.74%), Postives = 383/383 (100.00%), Query Frame = 0


Query: 1   MSLRRSFLSRRFSSKSLYRVPNGVGDGILRVASSEVEDGSGQPSGGRMQPESAWSSMLPE 60
           MSLRRSFLSRRFSSKSLYRVPNGVGDGILRVASSEVEDGSGQPSGGRMQPESAWSSMLPE
Sbjct: 1   MSLRRSFLSRRFSSKSLYRVPNGVGDGILRVASSEVEDGSGQPSGGRMQPESAWSSMLPE 60

Query: 61  LLREIIQRVEASEDSWPNRQNVVSCACVCKRWRDITKEVARAAPLSGKITFPSCLKQPGP 120
           LLREIIQRVEASEDSWPNRQNVVSCACVCKRWRDITKEVARAAPLSGKITFPSCLKQPGP
Sbjct: 61  LLREIIQRVEASEDSWPNRQNVVSCACVCKRWRDITKEVARAAPLSGKITFPSCLKQPGP 120

Query: 121 CDPPHQCLIKRNKKTSTFYLYLALAPSFTDKGKFLLAARRYRHGSHTEYIISLDGEDLSQ 180
           CDPPHQCLIKRNKKTSTFYLYLALAPSFTDKGKFLLAARRYRHGSHTEYIISLDGEDLSQ
Sbjct: 121 CDPPHQCLIKRNKKTSTFYLYLALAPSFTDKGKFLLAARRYRHGSHTEYIISLDGEDLSQ 180

Query: 181 GSNAYVGKLSSDFLGTNFTIYDSQPPHNGAKPSSSKSSRRFASKQISPQVSAGNFEVGQV 240
           GSNAYVGKLSSDFLGTNFTIYDSQPPHNGAKPSSSKSSRRFASKQISPQVSAGNFE+GQV
Sbjct: 181 GSNAYVGKLSSDFLGTNFTIYDSQPPHNGAKPSSSKSSRRFASKQISPQVSAGNFEIGQV 240

Query: 241 SYKFNLLKSRGPRRMICSLKCPVSEDTGTSKPYEDSKMKKSESFSPSSGSTILRNKAPRW 300
           SYKFNLLKSRGPRRMICSLKCPVSEDTGTSKPYEDSKMKKSESFSPSSGSTILRNKAPRW
Sbjct: 241 SYKFNLLKSRGPRRMICSLKCPVSEDTGTSKPYEDSKMKKSESFSPSSGSTILRNKAPRW 300

Query: 301 HEHLQCWCLNFHGRVTVASVKNFQLVAAVDHSQPGVKGDEETVLLQFGKVGDDTFTMDYR 360
           HEHLQCWCLNFHGRVTVASVKNFQLVAAVDHSQPGVKGDEETVLLQFGKVGDDTFTMDYR
Sbjct: 301 HEHLQCWCLNFHGRVTVASVKNFQLVAAVDHSQPGVKGDEETVLLQFGKVGDDTFTMDYR 360

Query: 361 QPLSAFQAFAICLTSFGTKLACE 384
           QPLSAFQAFAICLTSFGTKLACE
Sbjct: 361 QPLSAFQAFAICLTSFGTKLACE 383

[Close]

BLAST of Carg13163 vs. ExPASy TrEMBL
Match: A0A6J1J1X1 (Tubby-like F-box protein OS=Cucurbita maxima OX=3661 GN=LOC111480509 PE=3 SV=1)

HSP 1 Score: 770.0 bits (1987), Expect = 4.6e-219
Identity = 381/384 (99.22%), Postives = 382/384 (99.48%), Query Frame = 0


Query: 1   MSLRRSFLSRRFSSKSLYRVPNGVGDGILRVASSEVEDGSGQPSGGRMQPESAWSSMLPE 60
           MSLRRSFLSRRFSSKSLYRVPNGVGDGILRVASSEVEDGSGQ SGGRMQPESAWSSMLPE
Sbjct: 1   MSLRRSFLSRRFSSKSLYRVPNGVGDGILRVASSEVEDGSGQLSGGRMQPESAWSSMLPE 60

Query: 61  LLREIIQRVEASEDSWPNRQNVVSCACVCKRWRDITKEVARAAPLSGKITFPSCLKQPGP 120
           LLREIIQRVEASEDSWPNRQNVVSCACVCKRWRDITKEVARAAPLSGKITFPSCLKQPGP
Sbjct: 61  LLREIIQRVEASEDSWPNRQNVVSCACVCKRWRDITKEVARAAPLSGKITFPSCLKQPGP 120

Query: 121 CDPPHQCLIKRNKKTSTFYLYLALAPSFTDKGKFLLAARRYRHGSHTEYIISLDGEDLSQ 180
           CDPPHQCLIKRNKKTSTFYLYLALAPSFTDKGKFLLAARRYRHGSHTEYIISLDGEDLSQ
Sbjct: 121 CDPPHQCLIKRNKKTSTFYLYLALAPSFTDKGKFLLAARRYRHGSHTEYIISLDGEDLSQ 180

Query: 181 GSNAYVGKLSSDFLGTNFTIYDSQPPHNGAKPSSSKSSRRFASKQISPQVSAGNFEVGQV 240
           GSNAYVGKLSSDFLGTNFTIYDSQPPHNGAKPSSSKSSRRFASKQISPQVSAGNFEVGQV
Sbjct: 181 GSNAYVGKLSSDFLGTNFTIYDSQPPHNGAKPSSSKSSRRFASKQISPQVSAGNFEVGQV 240

Query: 241 SYKFNLLKSRGPRRMICSLKCPVSEDTGTSKPYEDSKMKKSESFSPSSGSTILRNKAPRW 300
           SYKFNLLKSRGPRRMICSLKCPVSEDTGTSKPY+DSKMKKSESFSPSSGSTILRNKAPRW
Sbjct: 241 SYKFNLLKSRGPRRMICSLKCPVSEDTGTSKPYDDSKMKKSESFSPSSGSTILRNKAPRW 300

Query: 301 HEHLQCWCLNFHGRVTVASVKNFQLVAAVDHSQP-GVKGDEETVLLQFGKVGDDTFTMDY 360
           HEHLQCWCLNFHGRVTVASVKNFQLVAAVDHSQP GVKGDEETVLLQFGKVGDDTFTMDY
Sbjct: 301 HEHLQCWCLNFHGRVTVASVKNFQLVAAVDHSQPGGVKGDEETVLLQFGKVGDDTFTMDY 360

Query: 361 RQPLSAFQAFAICLTSFGTKLACE 384
           RQPLSAFQAFAICLTSFGTKLACE
Sbjct: 361 RQPLSAFQAFAICLTSFGTKLACE 384

[Close]

BLAST of Carg13163 vs. ExPASy TrEMBL
Match: A0A6J1JA76 (Tubby-like F-box protein OS=Cucurbita maxima OX=3661 GN=LOC111482667 PE=3 SV=1)

HSP 1 Score: 686.0 bits (1769), Expect = 8.8e-194
Identity = 344/387 (88.89%), Postives = 359/387 (92.76%), Query Frame = 0


Query: 1   MSLRRSFLSRRFSSKSLYRVPNGVGDGILRVASSEVEDGSGQP---SGGRMQPESAWSSM 60
           MSLRRSFLSR+FSSKS +R PNGV +GI+RVA SEVE  SGQP    G  MQ ES+WSSM
Sbjct: 1   MSLRRSFLSRKFSSKSSFRDPNGV-EGIVRVAVSEVEGASGQPGGTDGDLMQGESSWSSM 60

Query: 61  LPELLREIIQRVEASEDSWPNRQNVVSCACVCKRWRDITKEVARAAPLSGKITFPSCLKQ 120
           LPELLREIIQRVEASED WPNRQNVVSCACVCKRWRDITKE+AR  P SGKITFPSCLKQ
Sbjct: 61  LPELLREIIQRVEASEDGWPNRQNVVSCACVCKRWRDITKEIARGTPHSGKITFPSCLKQ 120

Query: 121 PGPCDPPHQCLIKRNKKTSTFYLYLALAPSFTDKGKFLLAARRYRHGSHTEYIISLDGED 180
           PGP D PHQCLIKRNKKTSTFYLYLAL PSFTDKGKFLLAARRYRHG+HTEYIISLD E+
Sbjct: 121 PGPSDLPHQCLIKRNKKTSTFYLYLALTPSFTDKGKFLLAARRYRHGAHTEYIISLDAEE 180

Query: 181 LSQGSNAYVGKLSSDFLGTNFTIYDSQPPHNGAKPSSSKSSRRFASKQISPQVSAGNFEV 240
           LSQG+NAYVGKLSSDFLGTNFTIYDSQPPHNGAKPSSSKSSRRFASKQISPQVSAGNFEV
Sbjct: 181 LSQGNNAYVGKLSSDFLGTNFTIYDSQPPHNGAKPSSSKSSRRFASKQISPQVSAGNFEV 240

Query: 241 GQVSYKFNLLKSRGPRRMICSLKCPVSEDTGTSKPYEDSKMKKSESFSPSSGSTILRNKA 300
           GQVSYKFNLLKSRGPRRM+CSLKCPVSE++ TSKP E+  MKKS SFSPSSGSTILRNKA
Sbjct: 241 GQVSYKFNLLKSRGPRRMMCSLKCPVSEESVTSKPCENLMMKKSASFSPSSGSTILRNKA 300

Query: 301 PRWHEHLQCWCLNFHGRVTVASVKNFQLVAAVDHSQP-GVKGDEETVLLQFGKVGDDTFT 360
           PRWHEHLQCWCLNFHGRVTVASVKNFQLVA++DHSQP G KGDEETVLLQFGKVGDDTFT
Sbjct: 301 PRWHEHLQCWCLNFHGRVTVASVKNFQLVASIDHSQPGGGKGDEETVLLQFGKVGDDTFT 360

Query: 361 MDYRQPLSAFQAFAICLTSFGTKLACE 384
           MDYRQPLSAFQAFAICLTSFGTKLACE
Sbjct: 361 MDYRQPLSAFQAFAICLTSFGTKLACE 386

[Close]

BLAST of Carg13163 vs. ExPASy TrEMBL
Match: A0A6J1EZF6 (Tubby-like F-box protein OS=Cucurbita moschata OX=3662 GN=LOC111437624 PE=3 SV=1)

HSP 1 Score: 682.6 bits (1760), Expect = 9.7e-193
Identity = 343/387 (88.63%), Postives = 358/387 (92.51%), Query Frame = 0


Query: 1   MSLRRSFLSRRFSSKSLYRVPNGVGDGILRVASSEVEDGSGQP---SGGRMQPESAWSSM 60
           MSLRRSFLSR+FSSKS +R PNGV +GI+RVA SEVE  SG P    G  MQ ES+WSSM
Sbjct: 1   MSLRRSFLSRKFSSKSSFRDPNGV-EGIVRVAVSEVEGASGLPGGTDGDLMQGESSWSSM 60

Query: 61  LPELLREIIQRVEASEDSWPNRQNVVSCACVCKRWRDITKEVARAAPLSGKITFPSCLKQ 120
           LPELLREIIQRVEASED WPNRQNVVSCACVCKRWRDITKE+AR  P SGKITFPSCLKQ
Sbjct: 61  LPELLREIIQRVEASEDGWPNRQNVVSCACVCKRWRDITKEIARGTPHSGKITFPSCLKQ 120

Query: 121 PGPCDPPHQCLIKRNKKTSTFYLYLALAPSFTDKGKFLLAARRYRHGSHTEYIISLDGED 180
           PGP D PHQCLIKRNKKTSTFYLYLAL PSFTDKGKFLLAARRYRHG+HTEYIISLD E+
Sbjct: 121 PGPSDLPHQCLIKRNKKTSTFYLYLALTPSFTDKGKFLLAARRYRHGAHTEYIISLDAEE 180

Query: 181 LSQGSNAYVGKLSSDFLGTNFTIYDSQPPHNGAKPSSSKSSRRFASKQISPQVSAGNFEV 240
           LSQG+NAYVGKLSSDFLGTNFTIYDSQPPHNGAKPSSSKSSRRFASKQISPQVSAGNFEV
Sbjct: 181 LSQGNNAYVGKLSSDFLGTNFTIYDSQPPHNGAKPSSSKSSRRFASKQISPQVSAGNFEV 240

Query: 241 GQVSYKFNLLKSRGPRRMICSLKCPVSEDTGTSKPYEDSKMKKSESFSPSSGSTILRNKA 300
           GQVSYKFNLLKSRGPRRM+CSLKCP SE++ TSKP E+S MKKSESFS SSGSTILRNKA
Sbjct: 241 GQVSYKFNLLKSRGPRRMMCSLKCPESEESVTSKPCENSMMKKSESFSSSSGSTILRNKA 300

Query: 301 PRWHEHLQCWCLNFHGRVTVASVKNFQLVAAVDHSQP-GVKGDEETVLLQFGKVGDDTFT 360
           PRWHEHLQCWCLNFHGRVTVASVKNFQLVA++DHSQP G KGDEETVLLQFGKVGDDTFT
Sbjct: 301 PRWHEHLQCWCLNFHGRVTVASVKNFQLVASIDHSQPGGGKGDEETVLLQFGKVGDDTFT 360

Query: 361 MDYRQPLSAFQAFAICLTSFGTKLACE 384
           MDYRQPLSAFQAFAICLTSFGTKLACE
Sbjct: 361 MDYRQPLSAFQAFAICLTSFGTKLACE 386

[Close]

BLAST of Carg13163 vs. ExPASy TrEMBL
Match: A0A6J1J1X0 (Tubby-like F-box protein OS=Cucurbita maxima OX=3661 GN=LOC111482667 PE=3 SV=1)

HSP 1 Score: 677.9 bits (1748), Expect = 2.4e-191
Identity = 344/397 (86.65%), Postives = 359/397 (90.43%), Query Frame = 0


Query: 1   MSLRRSFLSRRFSSKSLYRVPNGVGDGILRVASSEVEDGSGQP---SGGRMQPESAWSSM 60
           MSLRRSFLSR+FSSKS +R PNGV +GI+RVA SEVE  SGQP    G  MQ ES+WSSM
Sbjct: 1   MSLRRSFLSRKFSSKSSFRDPNGV-EGIVRVAVSEVEGASGQPGGTDGDLMQGESSWSSM 60

Query: 61  LPELLREIIQRVEASEDSWPNRQNVVSCACVCKRWRDITKEVARAAPLSGKITFPSCLKQ 120
           LPELLREIIQRVEASED WPNRQNVVSCACVCKRWRDITKE+AR  P SGKITFPSCLKQ
Sbjct: 61  LPELLREIIQRVEASEDGWPNRQNVVSCACVCKRWRDITKEIARGTPHSGKITFPSCLKQ 120

Query: 121 PGPCDPPHQCLIKRNKKTSTFYLYLALAPS----------FTDKGKFLLAARRYRHGSHT 180
           PGP D PHQCLIKRNKKTSTFYLYLAL PS          FTDKGKFLLAARRYRHG+HT
Sbjct: 121 PGPSDLPHQCLIKRNKKTSTFYLYLALTPSHLRVISPTPAFTDKGKFLLAARRYRHGAHT 180

Query: 181 EYIISLDGEDLSQGSNAYVGKLSSDFLGTNFTIYDSQPPHNGAKPSSSKSSRRFASKQIS 240
           EYIISLD E+LSQG+NAYVGKLSSDFLGTNFTIYDSQPPHNGAKPSSSKSSRRFASKQIS
Sbjct: 181 EYIISLDAEELSQGNNAYVGKLSSDFLGTNFTIYDSQPPHNGAKPSSSKSSRRFASKQIS 240

Query: 241 PQVSAGNFEVGQVSYKFNLLKSRGPRRMICSLKCPVSEDTGTSKPYEDSKMKKSESFSPS 300
           PQVSAGNFEVGQVSYKFNLLKSRGPRRM+CSLKCPVSE++ TSKP E+  MKKS SFSPS
Sbjct: 241 PQVSAGNFEVGQVSYKFNLLKSRGPRRMMCSLKCPVSEESVTSKPCENLMMKKSASFSPS 300

Query: 301 SGSTILRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVAAVDHSQP-GVKGDEETVLLQ 360
           SGSTILRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVA++DHSQP G KGDEETVLLQ
Sbjct: 301 SGSTILRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVASIDHSQPGGGKGDEETVLLQ 360

Query: 361 FGKVGDDTFTMDYRQPLSAFQAFAICLTSFGTKLACE 384
           FGKVGDDTFTMDYRQPLSAFQAFAICLTSFGTKLACE
Sbjct: 361 FGKVGDDTFTMDYRQPLSAFQAFAICLTSFGTKLACE 396

[Close]

BLAST of Carg13163 vs. TAIR 10
Match: AT1G53320.1 (tubby like protein 7 )

HSP 1 Score: 533.1 bits (1372), Expect = 1.8e-151
Identity = 273/390 (70.00%), Postives = 308/390 (78.97%), Query Frame = 0


Query: 1   MSLRRSFLSRRFSSKSLYRVPNGVGDGILRVASSEVEDGSGQPSGGRMQPESAWSSMLPE 60
           M L RS LSRR S+   +R   G         ++   +    P    M   S+WS+MLPE
Sbjct: 1   MPLSRSLLSRRISNS--FRFHQG--------ETTTAPESESIPPPSNMAGSSSWSAMLPE 60

Query: 61  LLREIIQRVEASEDSWPNRQNVVSCACVCKRWRDITKEVARAAPLSGKITFPSCLKQPGP 120
           LL EII+RVE +ED WP R++VV+CACV K+WR+IT + AR++  SGKITFPSCLK PGP
Sbjct: 61  LLGEIIRRVEETEDRWPQRRDVVTCACVSKKWREITHDFARSSLNSGKITFPSCLKLPGP 120

Query: 121 CDPPHQCLIKRNKKTSTFYLYLALAPSFTDKGKFLLAARRYRHGSHTEYIISLDGEDLSQ 180
            D  +QCLIKRNKKTSTFYLYLAL PSFTDKGKFLLAARR+R G++TEYIISLD +D SQ
Sbjct: 121 RDFSNQCLIKRNKKTSTFYLYLALTPSFTDKGKFLLAARRFRTGAYTEYIISLDADDFSQ 180

Query: 181 GSNAYVGKLSSDFLGTNFTIYDSQPPHNGAKPSSSKSSRRFASKQISPQVSAGNFEVGQV 240
           GSNAYVGKL SDFLGTNFT+YDSQPPHNGAKPS+ K+SRRFASKQISPQV AGNFEVG V
Sbjct: 181 GSNAYVGKLRSDFLGTNFTVYDSQPPHNGAKPSNGKASRRFASKQISPQVPAGNFEVGHV 240

Query: 241 SYKFNLLKSRGPRRMICSLKCPVSEDTGTS-------KPYEDSKMKKSESFSPSSGSTIL 300
           SYKFNLLKSRGPRRM+ +L+CP    + +S       KP + +K+ K  +    S  TIL
Sbjct: 241 SYKFNLLKSRGPRRMVSTLRCPSPSPSSSSAGLSSDQKPCDVTKIMKKPN-KDGSSLTIL 300

Query: 301 RNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVAAVDHSQPGVKGDEETVLLQFGKVGDD 360
           +NKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVA VD SQP  KGDEETVLLQFGKVGDD
Sbjct: 301 KNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVATVDQSQPSGKGDEETVLLQFGKVGDD 360

Query: 361 TFTMDYRQPLSAFQAFAICLTSFGTKLACE 384
           TFTMDYRQPLSAFQAFAICLTSFGTKLACE
Sbjct: 361 TFTMDYRQPLSAFQAFAICLTSFGTKLACE 379

[Close]

BLAST of Carg13163 vs. TAIR 10
Match: AT2G47900.3 (tubby like protein 3 )

HSP 1 Score: 372.1 bits (954), Expect = 5.4e-103
Identity = 191/361 (52.91%), Postives = 250/361 (69.25%), Query Frame = 0


Query: 51  ESAWSSMLPELLREIIQRVEASEDSWPNRQNVVSCACVCKRWRDITKEVARAAPLSGKIT 110
           +S W+SM PELLR+++ R+E SED+WP+R+NVVSCA VC+ WR+I KE+ R   LS K+T
Sbjct: 49  QSCWASMPPELLRDVLMRIEQSEDTWPSRKNVVSCAGVCRNWREIVKEIVRVPELSSKLT 108

Query: 111 FPSCLKQPGPCDPPHQCLIKRNKKTSTFYLYLAL--APSFTDKGKFLLAARRYRHGSHTE 170
           FP  LKQPGP     QC I RN+   T+YLYL L  A +  D GKFLLAA+R+R  + T+
Sbjct: 109 FPISLKQPGPRGSLVQCYIMRNRSNQTYYLYLGLNQAAASNDDGKFLLAAKRFRRPTCTD 168

Query: 171 YIISLDGEDLSQGSNAYVGKLSSDFLGTNFTIYDSQPPHNGAKPSSSKSSRRFASKQISP 230
           YIISL+ +D+S+GSN Y+GKL S+FLGT FT+YD+QP + G + + ++SSR  + KQ+SP
Sbjct: 169 YIISLNCDDVSRGSNTYIGKLRSNFLGTKFTVYDAQPTNPGTQVTRTRSSRLLSLKQVSP 228

Query: 231 QVSAGNFEVGQVSYKFNLLKSRGPRRMIC---SLKCPVSEDTGTSKPYED---------- 290
           ++ +GN+ V  +SY+ N+L SRGPRRM C   ++     E  GT+    +          
Sbjct: 229 RIPSGNYPVAHISYELNVLGSRGPRRMQCVMDAIPASAVEPGGTAPTQTELVHSNLDSFP 288

Query: 291 ------SKMKKSESF--SPSS-----GSTILRNKAPRWHEHLQCWCLNFHGRVTVASVKN 350
                 SK  ++ES    PSS     G  +L+NKAPRWHE LQCWCLNF+GRVTVASVKN
Sbjct: 289 SFSFFRSKSIRAESLPSGPSSAAQKEGLLVLKNKAPRWHEQLQCWCLNFNGRVTVASVKN 348

Query: 351 FQLVAAVDHSQPGVKGDEETVLLQFGKVGDDTFTMDYRQPLSAFQAFAICLTSFGTKLAC 384
           FQLVAA ++   G   + E V+LQFGKVG D FTMDY+ P+SAFQAF ICL+SF TK+AC
Sbjct: 349 FQLVAAPENGPAG--PEHENVILQFGKVGKDVFTMDYQYPISAFQAFTICLSSFDTKIAC 407

[Close]

BLAST of Carg13163 vs. TAIR 10
Match: AT2G47900.1 (tubby like protein 3 )

HSP 1 Score: 370.5 bits (950), Expect = 1.6e-102
Identity = 190/360 (52.78%), Postives = 249/360 (69.17%), Query Frame = 0


Query: 51  ESAWSSMLPELLREIIQRVEASEDSWPNRQNVVSCACVCKRWRDITKEVARAAPLSGKIT 110
           +S W+SM PELLR+++ R+E SED+WP+R+NVVSCA VC+ WR+I KE+ R   LS K+T
Sbjct: 49  QSCWASMPPELLRDVLMRIEQSEDTWPSRKNVVSCAGVCRNWREIVKEIVRVPELSSKLT 108

Query: 111 FPSCLKQPGPCDPPHQCLIKRNKKTSTFYLYLAL-APSFTDKGKFLLAARRYRHGSHTEY 170
           FP  LKQPGP     QC I RN+   T+YLYL L   +  D GKFLLAA+R+R  + T+Y
Sbjct: 109 FPISLKQPGPRGSLVQCYIMRNRSNQTYYLYLGLNQAASNDDGKFLLAAKRFRRPTCTDY 168

Query: 171 IISLDGEDLSQGSNAYVGKLSSDFLGTNFTIYDSQPPHNGAKPSSSKSSRRFASKQISPQ 230
           IISL+ +D+S+GSN Y+GKL S+FLGT FT+YD+QP + G + + ++SSR  + KQ+SP+
Sbjct: 169 IISLNCDDVSRGSNTYIGKLRSNFLGTKFTVYDAQPTNPGTQVTRTRSSRLLSLKQVSPR 228

Query: 231 VSAGNFEVGQVSYKFNLLKSRGPRRMIC---SLKCPVSEDTGTSKPYED----------- 290
           + +GN+ V  +SY+ N+L SRGPRRM C   ++     E  GT+    +           
Sbjct: 229 IPSGNYPVAHISYELNVLGSRGPRRMQCVMDAIPASAVEPGGTAPTQTELVHSNLDSFPS 288

Query: 291 -----SKMKKSESF--SPSS-----GSTILRNKAPRWHEHLQCWCLNFHGRVTVASVKNF 350
                SK  ++ES    PSS     G  +L+NKAPRWHE LQCWCLNF+GRVTVASVKNF
Sbjct: 289 FSFFRSKSIRAESLPSGPSSAAQKEGLLVLKNKAPRWHEQLQCWCLNFNGRVTVASVKNF 348

Query: 351 QLVAAVDHSQPGVKGDEETVLLQFGKVGDDTFTMDYRQPLSAFQAFAICLTSFGTKLACE 384
           QLVAA ++   G   + E V+LQFGKVG D FTMDY+ P+SAFQAF ICL+SF TK+ACE
Sbjct: 349 QLVAAPENGPAG--PEHENVILQFGKVGKDVFTMDYQYPISAFQAFTICLSSFDTKIACE 406

[Close]

BLAST of Carg13163 vs. TAIR 10
Match: AT2G47900.2 (tubby like protein 3 )

HSP 1 Score: 370.5 bits (950), Expect = 1.6e-102
Identity = 190/360 (52.78%), Postives = 249/360 (69.17%), Query Frame = 0


Query: 51  ESAWSSMLPELLREIIQRVEASEDSWPNRQNVVSCACVCKRWRDITKEVARAAPLSGKIT 110
           +S W+SM PELLR+++ R+E SED+WP+R+NVVSCA VC+ WR+I KE+ R   LS K+T
Sbjct: 49  QSCWASMPPELLRDVLMRIEQSEDTWPSRKNVVSCAGVCRNWREIVKEIVRVPELSSKLT 108

Query: 111 FPSCLKQPGPCDPPHQCLIKRNKKTSTFYLYLAL-APSFTDKGKFLLAARRYRHGSHTEY 170
           FP  LKQPGP     QC I RN+   T+YLYL L   +  D GKFLLAA+R+R  + T+Y
Sbjct: 109 FPISLKQPGPRGSLVQCYIMRNRSNQTYYLYLGLNQAASNDDGKFLLAAKRFRRPTCTDY 168

Query: 171 IISLDGEDLSQGSNAYVGKLSSDFLGTNFTIYDSQPPHNGAKPSSSKSSRRFASKQISPQ 230
           IISL+ +D+S+GSN Y+GKL S+FLGT FT+YD+QP + G + + ++SSR  + KQ+SP+
Sbjct: 169 IISLNCDDVSRGSNTYIGKLRSNFLGTKFTVYDAQPTNPGTQVTRTRSSRLLSLKQVSPR 228

Query: 231 VSAGNFEVGQVSYKFNLLKSRGPRRMIC---SLKCPVSEDTGTSKPYED----------- 290
           + +GN+ V  +SY+ N+L SRGPRRM C   ++     E  GT+    +           
Sbjct: 229 IPSGNYPVAHISYELNVLGSRGPRRMQCVMDAIPASAVEPGGTAPTQTELVHSNLDSFPS 288

Query: 291 -----SKMKKSESF--SPSS-----GSTILRNKAPRWHEHLQCWCLNFHGRVTVASVKNF 350
                SK  ++ES    PSS     G  +L+NKAPRWHE LQCWCLNF+GRVTVASVKNF
Sbjct: 289 FSFFRSKSIRAESLPSGPSSAAQKEGLLVLKNKAPRWHEQLQCWCLNFNGRVTVASVKNF 348

Query: 351 QLVAAVDHSQPGVKGDEETVLLQFGKVGDDTFTMDYRQPLSAFQAFAICLTSFGTKLACE 384
           QLVAA ++   G   + E V+LQFGKVG D FTMDY+ P+SAFQAF ICL+SF TK+ACE
Sbjct: 349 QLVAAPENGPAG--PEHENVILQFGKVGKDVFTMDYQYPISAFQAFTICLSSFDTKIACE 406

[Close]

BLAST of Carg13163 vs. TAIR 10
Match: AT2G18280.1 (tubby like protein 2 )

HSP 1 Score: 344.7 bits (883), Expect = 9.3e-95
Identity = 192/396 (48.48%), Postives = 247/396 (62.37%), Query Frame = 0


Query: 13  SSKSLYRVPNGVGDGILRVA------SSEVEDGSGQPSGGRMQPESAWSSMLPELLREII 72
           S KS+ R    V DG+  ++      SS +      P    + P+S W+S+ PELL +II
Sbjct: 2   SLKSILRDLKEVRDGLGGISKRSWSKSSHIAPDQTTPPLDNI-PQSPWASLPPELLHDII 61

Query: 73  QRVEASEDSWPNRQNVVSCACVCKRWRDITKEVARAAPLSGKITFPSCLKQPGPCDPPHQ 132
            RVE SE +WP R  VVSCA VCK WR IT E+ R     GK+TFP  LKQPGP D P Q
Sbjct: 62  WRVEESETAWPARAAVVSCASVCKSWRGITMEIVRIPEQCGKLTFPISLKQPGPRDSPIQ 121

Query: 133 CLIKRNKKTSTFYLYLALAPSFTDKGKFLLAARRYRHGSHTEYIISLDGEDLSQGSNAYV 192
           C IKRN+ T+T+ LY  L PS T+  K LLAARR R  + T++IISL  ++ S+ S+ YV
Sbjct: 122 CFIKRNRATATYILYYGLMPSETENDKLLLAARRIRRATCTDFIISLSAKNFSRSSSTYV 181

Query: 193 GKLSSDFLGTNFTIYDSQPPHNGAKPSSSKSSRRFASKQISPQVSAGNFEVGQVSYKFNL 252
           GKL S FLGT FTIYD+Q     +  + ++ +RR   KQ +P++   +  VG ++Y+ N+
Sbjct: 182 GKLRSGFLGTKFTIYDNQ---TASSTAQAQPNRRLHPKQAAPKLPTNSSTVGNITYELNV 241

Query: 253 LKSRGPRRMICS-----LKCPVSEDT---GTSKPYEDSKMKKSESF---------SPS-- 312
           L++RGPRRM C+     L   ++E +   G  +    S   K E+          SPS  
Sbjct: 242 LRTRGPRRMHCAMDSIPLSSVIAEPSVVQGIEEEVSSSPSPKGETITTDKEIPDNSPSLR 301

Query: 313 SGSTILRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVAAVDHSQPGVKGDEETVLLQF 372
               +L+NK+PRWHE LQCWCLNF GRVTVASVKNFQLVA +D S      + E V+LQF
Sbjct: 302 DQPLVLKNKSPRWHEQLQCWCLNFKGRVTVASVKNFQLVAEIDASLDAPPEEHERVILQF 361

Query: 373 GKVGDDTFTMDYRQPLSAFQAFAICLTSFGTKLACE 384
           GK+G D FTMDYR PLSAFQAFAIC++SF TK ACE
Sbjct: 362 GKIGKDIFTMDYRYPLSAFQAFAICISSFDTKPACE 393

The following BLAST results are available for this feature:

BLAST of Carg13163 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7031066.1	1.2e-221	100.00	Tubby-like F-box protein 7 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022942880.1	1.6e-221	99.74	tubby-like F-box protein 7 [Cucurbita moschata] >XP_022942881.1 tubby-like F-box...	[more]
KAG6600404.1	4.6e-221	99.74	Tubby-like F-box protein 7, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023554773.1	2.3e-220	99.48	tubby-like F-box protein 7 [Cucurbita pepo subsp. pepo]	[more]
XP_022981364.1	9.6e-219	99.22	tubby-like F-box protein 7 [Cucurbita maxima] >XP_022981373.1 tubby-like F-box p...	[more]

BLAST of Carg13163 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93VI8	2.6e-150	70.00	Tubby-like F-box protein 7 OS=Arabidopsis thaliana OX=3702 GN=TULP7 PE=2 SV=1	[more]
Q5QM27	1.1e-132	67.71	Tubby-like F-box protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=TULP1 PE=...	[more]
Q68Y48	3.2e-132	65.41	Tubby-like F-box protein 9 OS=Oryza sativa subsp. japonica OX=39947 GN=TULP9 PE=...	[more]
Q688Y7	2.8e-128	65.51	Tubby-like F-box protein 10 OS=Oryza sativa subsp. japonica OX=39947 GN=TULP10 P...	[more]
Q94DT9	2.3e-106	53.97	Tubby-like F-box protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=TULP2 PE=...	[more]

BLAST of Carg13163 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FQ64	7.7e-222	99.74	Tubby-like F-box protein OS=Cucurbita moschata OX=3662 GN=LOC111447778 PE=3 SV=1	[more]
A0A6J1J1X1	4.6e-219	99.22	Tubby-like F-box protein OS=Cucurbita maxima OX=3661 GN=LOC111480509 PE=3 SV=1	[more]
A0A6J1JA76	8.8e-194	88.89	Tubby-like F-box protein OS=Cucurbita maxima OX=3661 GN=LOC111482667 PE=3 SV=1	[more]
A0A6J1EZF6	9.7e-193	88.63	Tubby-like F-box protein OS=Cucurbita moschata OX=3662 GN=LOC111437624 PE=3 SV=1	[more]
A0A6J1J1X0	2.4e-191	86.65	Tubby-like F-box protein OS=Cucurbita maxima OX=3661 GN=LOC111482667 PE=3 SV=1	[more]

BLAST of Carg13163 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G53320.1	1.8e-151	70.00	tubby like protein 7	[more]
AT2G47900.3	5.4e-103	52.91	tubby like protein 3	[more]
AT2G47900.1	1.6e-102	52.78	tubby like protein 3	[more]
AT2G47900.2	1.6e-102	52.78	tubby like protein 3	[more]
AT2G18280.1	9.3e-95	48.48	tubby like protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000007	Tubby, C-terminal	PRINTS	PR01573	SUPERTUBBY	coord: 185..209 score: 50.73 coord: 293..310 score: 63.38 coord: 169..185 score: 47.06 coord: 311..327 score: 85.03 coord: 234..261 score: 39.94 coord: 340..359 score: 59.32 coord: 361..383 score: 75.89
IPR000007	Tubby, C-terminal	PFAM	PF01167	Tub	coord: 117..378 e-value: 1.5E-101 score: 339.4
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 54..98 e-value: 4.8E-8 score: 32.7
IPR025659	Tubby-like, C-terminal	GENE3D	3.20.90.10	Tubby Protein; Chain A	coord: 110..383 e-value: 1.9E-89 score: 301.5
IPR025659	Tubby-like, C-terminal	SUPERFAMILY	54518	Tubby C-terminal domain-like	coord: 104..383
None	No IPR available	GENE3D	1.20.1280.50		coord: 48..100 e-value: 2.5E-5 score: 26.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 203..223
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 264..290
None	No IPR available	PANTHER	PTHR16517:SF50	TUBBY-LIKE F-BOX PROTEIN 7	coord: 1..383
None	No IPR available	PANTHER	PTHR16517	TUBBY-RELATED	coord: 1..383
IPR018066	Tubby, C-terminal, conserved site	PROSITE	PS01201	TUB_2	coord: 368..383
IPR018066	Tubby, C-terminal, conserved site	PROSITE	PS01200	TUB_1	coord: 311..324
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 48..97

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg13163-RA	Carg13163-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0005515	protein binding