Homology
BLAST of Carg13153 vs. NCBI nr
Match:
KAG7031076.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1578.5 bits (4086), Expect = 0.0e+00
Identity = 780/780 (100.00%), Postives = 780/780 (100.00%), Query Frame = 0
Query: 1 MHLTRFKINKTVPVLFPFSRRLACVLSTQPHKEHHQEPPWQLQDQLLYSVSSILSNSSLD 60
MHLTRFKINKTVPVLFPFSRRLACVLSTQPHKEHHQEPPWQLQDQLLYSVSSILSNSSLD
Sbjct: 1 MHLTRFKINKTVPVLFPFSRRLACVLSTQPHKEHHQEPPWQLQDQLLYSVSSILSNSSLD 60
Query: 61 SSKCRALFPHLSPLEFDLMFFSVGLKANPKTCLNFFYFASDSFKFRFTIRSYCILILLLI 120
SSKCRALFPHLSPLEFDLMFFSVGLKANPKTCLNFFYFASDSFKFRFTIRSYCILILLLI
Sbjct: 61 SSKCRALFPHLSPLEFDLMFFSVGLKANPKTCLNFFYFASDSFKFRFTIRSYCILILLLI 120
Query: 121 NSKFLPPARLLLIRLIDGKLPVLNFDLNKLHIEIANALLGLTSVVGRFEWTQAFDLLIHV 180
NSKFLPPARLLLIRLIDGKLPVLNFDLNKLHIEIANALLGLTSVVGRFEWTQAFDLLIHV
Sbjct: 121 NSKFLPPARLLLIRLIDGKLPVLNFDLNKLHIEIANALLGLTSVVGRFEWTQAFDLLIHV 180
Query: 181 YSTQFMNLGFGCAVDAFYLFAQKGIFPSLKTCNFLLSSLVKANELEKCCEVFEVMSRGVR 240
YSTQFMNLGFGCAVDAFYLFAQKGIFPSLKTCNFLLSSLVKANELEKCCEVFEVMSRGVR
Sbjct: 181 YSTQFMNLGFGCAVDAFYLFAQKGIFPSLKTCNFLLSSLVKANELEKCCEVFEVMSRGVR 240
Query: 241 PDVFLFTNNGRLDDAFKLKEKMIIEGVKPSLITYSVLINGLTKLEKFDEANHVLNEMVDT 300
PDVFLFTNNGRLDDAFKLKEKMIIEGVKPSLITYSVLINGLTKLEKFDEANHVLNEMVDT
Sbjct: 241 PDVFLFTNNGRLDDAFKLKEKMIIEGVKPSLITYSVLINGLTKLEKFDEANHVLNEMVDT 300
Query: 301 GFVPNAVVYNTLIDGYCKMGNINEALKIRDVMISKNITHTSVTLYSLMLGFCKSNQIERA 360
GFVPNAVVYNTLIDGYCKMGNINEALKIRDVMISKNITHTSVTLYSLMLGFCKSNQIERA
Sbjct: 301 GFVPNAVVYNTLIDGYCKMGNINEALKIRDVMISKNITHTSVTLYSLMLGFCKSNQIERA 360
Query: 361 ENSLEEILSQGLSINRVTCYSVIHWLCTKSRFDSALRFTMVMLSKNFRPSDQLLTILVCG 420
ENSLEEILSQGLSINRVTCYSVIHWLCTKSRFDSALRFTMVMLSKNFRPSDQLLTILVCG
Sbjct: 361 ENSLEEILSQGLSINRVTCYSVIHWLCTKSRFDSALRFTMVMLSKNFRPSDQLLTILVCG 420
Query: 421 LCKDGKHLDATELWFRLFEKGSPASTATSNALIHGLCGAGNLQEAVRILKEMLERGFPLD 480
LCKDGKHLDATELWFRLFEKGSPASTATSNALIHGLCGAGNLQEAVRILKEMLERGFPLD
Sbjct: 421 LCKDGKHLDATELWFRLFEKGSPASTATSNALIHGLCGAGNLQEAVRILKEMLERGFPLD 480
Query: 481 RITYNTLILGYCKAGKVEECFRLIDEMTKLGIEPDIYTCNLLLHGLCNAGNLDGAIKLWD 540
RITYNTLILGYCKAGKVEECFRLIDEMTKLGIEPDIYTCNLLLHGLCNAGNLDGAIKLWD
Sbjct: 481 RITYNTLILGYCKAGKVEECFRLIDEMTKLGIEPDIYTCNLLLHGLCNAGNLDGAIKLWD 540
Query: 541 EFKANGLVSNVYTYGVMMDGYCKANRMEDVEELFNEMVTKKMELSTIVYNILIRANCHSG 600
EFKANGLVSNVYTYGVMMDGYCKANRMEDVEELFNEMVTKKMELSTIVYNILIRANCHSG
Sbjct: 541 EFKANGLVSNVYTYGVMMDGYCKANRMEDVEELFNEMVTKKMELSTIVYNILIRANCHSG 600
Query: 601 NVVAALQVRDDMKSKGMFPTCSTYSSLIHGMCNVGRVEEAKQLIDEMRGEGLLTNVVCYT 660
NVVAALQVRDDMKSKGMFPTCSTYSSLIHGMCNVGRVEEAKQLIDEMRGEGLLTNVVCYT
Sbjct: 601 NVVAALQVRDDMKSKGMFPTCSTYSSLIHGMCNVGRVEEAKQLIDEMRGEGLLTNVVCYT 660
Query: 661 ALIGGYCKLGRMDIAEATLLEMISFNIRPNKFTYTVMIDGYCKLGNMEEANKLLSKMKES 720
ALIGGYCKLGRMDIAEATLLEMISFNIRPNKFTYTVMIDGYCKLGNMEEANKLLSKMKES
Sbjct: 661 ALIGGYCKLGRMDIAEATLLEMISFNIRPNKFTYTVMIDGYCKLGNMEEANKLLSKMKES 720
Query: 721 GIVPDVVTYNTLSNGLYKGKDMDKAYKICDQMSTAGLSLDEITYTTLVHGWNRPTIASQN 780
GIVPDVVTYNTLSNGLYKGKDMDKAYKICDQMSTAGLSLDEITYTTLVHGWNRPTIASQN
Sbjct: 721 GIVPDVVTYNTLSNGLYKGKDMDKAYKICDQMSTAGLSLDEITYTTLVHGWNRPTIASQN 780
BLAST of Carg13153 vs. NCBI nr
Match:
KAG6600423.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1549.6 bits (4011), Expect = 0.0e+00
Identity = 776/822 (94.40%), Postives = 777/822 (94.53%), Query Frame = 0
Query: 1 MHLTRFKINKTVPVLFPFSRRLACVLSTQPHKEHHQEPPWQLQDQLLYSVSSILSNSSLD 60
MHLTRFKINKTVPVLFPFSRRLACVLSTQPHKEHHQEPPWQLQDQLLYSVSSILSNSSLD
Sbjct: 1 MHLTRFKINKTVPVLFPFSRRLACVLSTQPHKEHHQEPPWQLQDQLLYSVSSILSNSSLD 60
Query: 61 SSKCRALFPHLSPLEFDLMFFSVGLKANPKTCLNFFYFASDSFKFRFTIRSYCILILLLI 120
SSKCRALFPHLSPLEFD MFFSVGLKANPKTCLNFFYFASDSFKFRFTIRSYCILILLLI
Sbjct: 61 SSKCRALFPHLSPLEFDRMFFSVGLKANPKTCLNFFYFASDSFKFRFTIRSYCILILLLI 120
Query: 121 NSKFLPPARLLLIRLIDGKLPVLNFDLNKLHIEIANALLGLTSVVGRFEWTQAFDLLIHV 180
NSKFLPPARLLLIRLIDGKLPVLNFDLNKLHIEIANALLGLTSVVGRFEWTQAFDLLIHV
Sbjct: 121 NSKFLPPARLLLIRLIDGKLPVLNFDLNKLHIEIANALLGLTSVVGRFEWTQAFDLLIHV 180
Query: 181 YSTQFMNLGFGCAVDAFYLFAQKGIFPSLKTCNFLLSSLVKANELEKCCEVFEVMSRGVR 240
YSTQFMNLGFGCAVDAFYLFAQKGIFPSLKTCNFLLSSLVKANELEKCCEVFEVMSRGVR
Sbjct: 181 YSTQFMNLGFGCAVDAFYLFAQKGIFPSLKTCNFLLSSLVKANELEKCCEVFEVMSRGVR 240
Query: 241 PDVFLFTN------------------------------------------NGRLDDAFKL 300
PDVFLFTN NGRLDDAFKL
Sbjct: 241 PDVFLFTNVINALCKGGKMENAIELFLKMEKSGISSNVVTYNSIIHGFCQNGRLDDAFKL 300
Query: 301 KEKMIIEGVKPSLITYSVLINGLTKLEKFDEANHVLNEMVDTGFVPNAVVYNTLIDGYCK 360
KEKMIIEGVKPSLITYSVLINGLTKLEKFDEANHVLNEMVDTGFVPNAVVYNTLIDGYCK
Sbjct: 301 KEKMIIEGVKPSLITYSVLINGLTKLEKFDEANHVLNEMVDTGFVPNAVVYNTLIDGYCK 360
Query: 361 MGNINEALKIRDVMISKNITHTSVTLYSLMLGFCKSNQIERAENSLEEILSQGLSINRVT 420
MGNINEALKIRDVMISKNITHTSVTLYSLMLGFCKSNQIERAENSLEEILSQGLSINRVT
Sbjct: 361 MGNINEALKIRDVMISKNITHTSVTLYSLMLGFCKSNQIERAENSLEEILSQGLSINRVT 420
Query: 421 CYSVIHWLCTKSRFDSALRFTMVMLSKNFRPSDQLLTILVCGLCKDGKHLDATELWFRLF 480
CYSVIHWLCTKSRFDSALRFTM+MLSKNFRPSDQLLTILVCGLCKD KHLDATELWFRLF
Sbjct: 421 CYSVIHWLCTKSRFDSALRFTMMMLSKNFRPSDQLLTILVCGLCKDDKHLDATELWFRLF 480
Query: 481 EKGSPASTATSNALIHGLCGAGNLQEAVRILKEMLERGFPLDRITYNTLILGYCKAGKVE 540
EKGSPASTATSNALIHGLCGAGNLQEAVRILKEMLERGFPLDRITYNTLILGYCKAGKVE
Sbjct: 481 EKGSPASTATSNALIHGLCGAGNLQEAVRILKEMLERGFPLDRITYNTLILGYCKAGKVE 540
Query: 541 ECFRLIDEMTKLGIEPDIYTCNLLLHGLCNAGNLDGAIKLWDEFKANGLVSNVYTYGVMM 600
ECFRLIDEMTKL IEPDIYTCNLLLHGLCNAGNLDGAIKLWDEFKANGLVSNVYTYGVMM
Sbjct: 541 ECFRLIDEMTKLSIEPDIYTCNLLLHGLCNAGNLDGAIKLWDEFKANGLVSNVYTYGVMM 600
Query: 601 DGYCKANRMEDVEELFNEMVTKKMELSTIVYNILIRANCHSGNVVAALQVRDDMKSKGMF 660
DGYCKANRMEDVEELFNEMVTKKMELSTIVYNILIRANCHSGNVVAALQVRDDMKSKGMF
Sbjct: 601 DGYCKANRMEDVEELFNEMVTKKMELSTIVYNILIRANCHSGNVVAALQVRDDMKSKGMF 660
Query: 661 PTCSTYSSLIHGMCNVGRVEEAKQLIDEMRGEGLLTNVVCYTALIGGYCKLGRMDIAEAT 720
PTCSTYSSLIHGMCNVGRVEEAKQLIDEMRGEGLLTNVVCYTALIGGYCKLGRMDIAEAT
Sbjct: 661 PTCSTYSSLIHGMCNVGRVEEAKQLIDEMRGEGLLTNVVCYTALIGGYCKLGRMDIAEAT 720
Query: 721 LLEMISFNIRPNKFTYTVMIDGYCKLGNMEEANKLLSKMKESGIVPDVVTYNTLSNGLYK 780
LLEMISFNIRPNKFTYTVMIDGYCKLGNMEEANKLLSKMKESGIVPDVVTYNTLSNGLYK
Sbjct: 721 LLEMISFNIRPNKFTYTVMIDGYCKLGNMEEANKLLSKMKESGIVPDVVTYNTLSNGLYK 780
BLAST of Carg13153 vs. NCBI nr
Match:
XP_022942543.1 (pentatricopeptide repeat-containing protein At4g19440, chloroplastic-like [Cucurbita moschata] >XP_022942544.1 pentatricopeptide repeat-containing protein At4g19440, chloroplastic-like [Cucurbita moschata] >XP_022942545.1 pentatricopeptide repeat-containing protein At4g19440, chloroplastic-like [Cucurbita moschata])
HSP 1 Score: 1535.8 bits (3975), Expect = 0.0e+00
Identity = 768/822 (93.43%), Postives = 771/822 (93.80%), Query Frame = 0
Query: 1 MHLTRFKINKTVPVLFPFSRRLACVLSTQPHKEHHQEPPWQLQDQLLYSVSSILSNSSLD 60
MHLTRFKINKT+PVLFPFSRRLACVLSTQPHKEHHQEPPWQLQDQLLYSVSSILSNSSLD
Sbjct: 1 MHLTRFKINKTIPVLFPFSRRLACVLSTQPHKEHHQEPPWQLQDQLLYSVSSILSNSSLD 60
Query: 61 SSKCRALFPHLSPLEFDLMFFSVGLKANPKTCLNFFYFASDSFKFRFTIRSYCILILLLI 120
SSKCRALFPHLSPLEFD MFFSVGLKANPKTCLNFFYFASDSFKFRFTIRSYCILILLLI
Sbjct: 61 SSKCRALFPHLSPLEFDRMFFSVGLKANPKTCLNFFYFASDSFKFRFTIRSYCILILLLI 120
Query: 121 NSKFLPPARLLLIRLIDGKLPVLNFDLNKLHIEIANALLGLTSVVGRFEWTQAFDLLIHV 180
NSKFLPPARLLLIRLIDGKLP+LNFDLNKLHIEIAN LLGLTSVVGRFEWTQAFDLLIHV
Sbjct: 121 NSKFLPPARLLLIRLIDGKLPLLNFDLNKLHIEIANTLLGLTSVVGRFEWTQAFDLLIHV 180
Query: 181 YSTQFMNLGFGCAVDAFYLFAQKGIFPSLKTCNFLLSSLVKANELEKCCEVFEVMSRGVR 240
YSTQF NLGFGCA DAFYLFAQKGIFPSLKTCNFLLSSLVKANELEKCCEVFEVMSRGVR
Sbjct: 181 YSTQFRNLGFGCAFDAFYLFAQKGIFPSLKTCNFLLSSLVKANELEKCCEVFEVMSRGVR 240
Query: 241 PDVFLFTN------------------------------------------NGRLDDAFKL 300
PDVFLFTN NGRLDDAFKL
Sbjct: 241 PDVFLFTNVINALCKGGKMENAIELFLKMEKSGISPNVVTYNSIIHGFCQNGRLDDAFKL 300
Query: 301 KEKMIIEGVKPSLITYSVLINGLTKLEKFDEANHVLNEMVDTGFVPNAVVYNTLIDGYCK 360
KEKMIIEGVKPSLITYSVLINGLTKLE FD+ANHVLNEMVDTGFVPNAVVYNTLIDGYCK
Sbjct: 301 KEKMIIEGVKPSLITYSVLINGLTKLENFDKANHVLNEMVDTGFVPNAVVYNTLIDGYCK 360
Query: 361 MGNINEALKIRDVMISKNITHTSVTLYSLMLGFCKSNQIERAENSLEEILSQGLSINRVT 420
MGNINEALKIRDVMISKNITHTSVTLYSLMLGFCKSNQIERAENSLEEILSQGLSINRVT
Sbjct: 361 MGNINEALKIRDVMISKNITHTSVTLYSLMLGFCKSNQIERAENSLEEILSQGLSINRVT 420
Query: 421 CYSVIHWLCTKSRFDSALRFTMVMLSKNFRPSDQLLTILVCGLCKDGKHLDATELWFRLF 480
CYSVIHWLCTKSRFDSALRFTMVMLSKNFRPSDQLLTILVCGLCKDGKHLDATELWFRL
Sbjct: 421 CYSVIHWLCTKSRFDSALRFTMVMLSKNFRPSDQLLTILVCGLCKDGKHLDATELWFRLL 480
Query: 481 EKGSPASTATSNALIHGLCGAGNLQEAVRILKEMLERGFPLDRITYNTLILGYCKAGKVE 540
EKGSPASTATSNALIHGLCGAGNLQEAVRILKEMLERGFP DRITYNTLILGYCKAGKVE
Sbjct: 481 EKGSPASTATSNALIHGLCGAGNLQEAVRILKEMLERGFPSDRITYNTLILGYCKAGKVE 540
Query: 541 ECFRLIDEMTKLGIEPDIYTCNLLLHGLCNAGNLDGAIKLWDEFKANGLVSNVYTYGVMM 600
ECF LIDEM KLGIEPDIYTCNLLLHGLCNAGNLDGAIKLWDEFKANGLVSNVYTYGVMM
Sbjct: 541 ECFTLIDEMIKLGIEPDIYTCNLLLHGLCNAGNLDGAIKLWDEFKANGLVSNVYTYGVMM 600
Query: 601 DGYCKANRMEDVEELFNEMVTKKMELSTIVYNILIRANCHSGNVVAALQVRDDMKSKGMF 660
DGYCKANRMEDVEELFNEMVTKKMELSTIVYNILIRANCHSGNVVAALQVRDDMKSKGMF
Sbjct: 601 DGYCKANRMEDVEELFNEMVTKKMELSTIVYNILIRANCHSGNVVAALQVRDDMKSKGMF 660
Query: 661 PTCSTYSSLIHGMCNVGRVEEAKQLIDEMRGEGLLTNVVCYTALIGGYCKLGRMDIAEAT 720
PTCSTYSSLIHGMCNVGRVEEAKQLIDEMRGEGLLTNVVCYTALIGGYCKLGRMDIAEAT
Sbjct: 661 PTCSTYSSLIHGMCNVGRVEEAKQLIDEMRGEGLLTNVVCYTALIGGYCKLGRMDIAEAT 720
Query: 721 LLEMISFNIRPNKFTYTVMIDGYCKLGNMEEANKLLSKMKESGIVPDVVTYNTLSNGLYK 780
LLEMISFNIRPNKFTYTVMIDGYCKLGNMEEANKLLSKMKESGIVPDVVTYNTLSNGLYK
Sbjct: 721 LLEMISFNIRPNKFTYTVMIDGYCKLGNMEEANKLLSKMKESGIVPDVVTYNTLSNGLYK 780
BLAST of Carg13153 vs. NCBI nr
Match:
XP_023542002.1 (pentatricopeptide repeat-containing protein At4g19440, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023542009.1 pentatricopeptide repeat-containing protein At4g19440, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023542017.1 pentatricopeptide repeat-containing protein At4g19440, chloroplastic-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1526.9 bits (3952), Expect = 0.0e+00
Identity = 763/822 (92.82%), Postives = 771/822 (93.80%), Query Frame = 0
Query: 1 MHLTRFKINKTVPVLFPFSRRLACVLSTQPHKEHHQEPPWQLQDQLLYSVSSILSNSSLD 60
MHLTRFKINKTVPVLFPFSRRLACVLSTQPHKEHHQEPPWQLQDQLLYSVSSILSNSSLD
Sbjct: 1 MHLTRFKINKTVPVLFPFSRRLACVLSTQPHKEHHQEPPWQLQDQLLYSVSSILSNSSLD 60
Query: 61 SSKCRALFPHLSPLEFDLMFFSVGLKANPKTCLNFFYFASDSFKFRFTIRSYCILILLLI 120
SSKCRAL PHLSPLEFD MFFSVGLKANPKTCLNFFYFASDSFKFRFTIRSYCIL+LLLI
Sbjct: 61 SSKCRALLPHLSPLEFDRMFFSVGLKANPKTCLNFFYFASDSFKFRFTIRSYCILVLLLI 120
Query: 121 NSKFLPPARLLLIRLIDGKLPVLNFDLNKLHIEIANALLGLTSVVGRFEWTQAFDLLIHV 180
NSKFLPPARLLLIRLIDGKLPVLNFDLNKLHIEIANALLGLTSVVGRFEWTQAFDLLIHV
Sbjct: 121 NSKFLPPARLLLIRLIDGKLPVLNFDLNKLHIEIANALLGLTSVVGRFEWTQAFDLLIHV 180
Query: 181 YSTQFMNLGFGCAVDAFYLFAQKGIFPSLKTCNFLLSSLVKANELEKCCEVFEVMSRGVR 240
YSTQF NLGFGCAVDAFYLFAQKGIFPSLKTCNFLLSSLVK NELEKCCEVFEVMSRGVR
Sbjct: 181 YSTQFRNLGFGCAVDAFYLFAQKGIFPSLKTCNFLLSSLVKDNELEKCCEVFEVMSRGVR 240
Query: 241 PDVFLFTN------------------------------------------NGRLDDAFKL 300
PDVFLFTN NGRLDDAFKL
Sbjct: 241 PDVFLFTNVINALCKGGKMENAIELFLKMEKSGISPNVVTYNSIIHGFCQNGRLDDAFKL 300
Query: 301 KEKMIIEGVKPSLITYSVLINGLTKLEKFDEANHVLNEMVDTGFVPNAVVYNTLIDGYCK 360
KEKMIIEGVKPSLITYSVLINGLTKLEKFDEANHVLNEMVDTGFVPNAVVYNTLIDGYCK
Sbjct: 301 KEKMIIEGVKPSLITYSVLINGLTKLEKFDEANHVLNEMVDTGFVPNAVVYNTLIDGYCK 360
Query: 361 MGNINEALKIRDVMISKNITHTSVTLYSLMLGFCKSNQIERAENSLEEILSQGLSINRVT 420
MGNINEALKIRDVMISKNITHTSVTLYSLM+GFCKSNQIERAENSLEEILSQGLSINRVT
Sbjct: 361 MGNINEALKIRDVMISKNITHTSVTLYSLMIGFCKSNQIERAENSLEEILSQGLSINRVT 420
Query: 421 CYSVIHWLCTKSRFDSALRFTMVMLSKNFRPSDQLLTILVCGLCKDGKHLDATELWFRLF 480
CYSVIHWLCT+SRFDSALRFTMVMLSKNFRPSD LLTILVCGLCKDGKHLDATELWFRL
Sbjct: 421 CYSVIHWLCTESRFDSALRFTMVMLSKNFRPSDHLLTILVCGLCKDGKHLDATELWFRLL 480
Query: 481 EKGSPASTATSNALIHGLCGAGNLQEAVRILKEMLERGFPLDRITYNTLILGYCKAGKVE 540
EKGSPA+TATSNALIHGLCGAGNLQEAVRILKEMLERGFPLDRITYNTLILGYCKAGKVE
Sbjct: 481 EKGSPANTATSNALIHGLCGAGNLQEAVRILKEMLERGFPLDRITYNTLILGYCKAGKVE 540
Query: 541 ECFRLIDEMTKLGIEPDIYTCNLLLHGLCNAGNLDGAIKLWDEFKANGLVSNVYTYGVMM 600
ECFRL DEMTKLGIEPDIYTCNLLLHGLCNAG LDGAIKLWDEFKANGLVSNVYTYGVMM
Sbjct: 541 ECFRLKDEMTKLGIEPDIYTCNLLLHGLCNAGKLDGAIKLWDEFKANGLVSNVYTYGVMM 600
Query: 601 DGYCKANRMEDVEELFNEMVTKKMELSTIVYNILIRANCHSGNVVAALQVRDDMKSKGMF 660
DGYCKANRMEDVEELFNEMVTKKMELSTIVYNILIRANCHSGNVVAALQVRDDMKSKGMF
Sbjct: 601 DGYCKANRMEDVEELFNEMVTKKMELSTIVYNILIRANCHSGNVVAALQVRDDMKSKGMF 660
Query: 661 PTCSTYSSLIHGMCNVGRVEEAKQLIDEMRGEGLLTNVVCYTALIGGYCKLGRMDIAEAT 720
PTCSTYSSLIHGMCNVGRVEEAKQLIDEMRGEGLLTNVVCYTALIGGYCKLGRMDIAE+T
Sbjct: 661 PTCSTYSSLIHGMCNVGRVEEAKQLIDEMRGEGLLTNVVCYTALIGGYCKLGRMDIAEST 720
Query: 721 LLEMISFNIRPNKFTYTVMIDGYCKLGNMEEANKLLSKMKESGIVPDVVTYNTLSNGLYK 780
LLEMISFNIRPNKFTYTVMIDGYCKLGNMEEANKLLSKMKESGIVPDVVTYNTL+NGLYK
Sbjct: 721 LLEMISFNIRPNKFTYTVMIDGYCKLGNMEEANKLLSKMKESGIVPDVVTYNTLTNGLYK 780
BLAST of Carg13153 vs. NCBI nr
Match:
XP_022979125.1 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g19440, chloroplastic-like [Cucurbita maxima])
HSP 1 Score: 1493.0 bits (3864), Expect = 0.0e+00
Identity = 751/822 (91.36%), Postives = 760/822 (92.46%), Query Frame = 0
Query: 1 MHLTRFKINKTVPVLFPFSRRLACVLSTQPHKEHHQEPPWQLQDQLLYSVSSILSNSSLD 60
MHLTRFKINKTVPVLFPFSRRLA VLSTQPHKEHHQEPPWQLQD LLYSVSSILSNSSLD
Sbjct: 1 MHLTRFKINKTVPVLFPFSRRLASVLSTQPHKEHHQEPPWQLQDXLLYSVSSILSNSSLD 60
Query: 61 SSKCRALFPHLSPLEFDLMFFSVGLKANPKTCLNFFYFASDSFKFRFTIRSYCILILLLI 120
SSKCRALFPHL PLEFD MFFSVGLKANPKTCLNFFYFASDSFKFRFTIRSYCILILLLI
Sbjct: 61 SSKCRALFPHLFPLEFDRMFFSVGLKANPKTCLNFFYFASDSFKFRFTIRSYCILILLLI 120
Query: 121 NSKFLPPARLLLIRLIDGKLPVLNFDLNKLHIEIANALLGLTSVVGRFEWTQAFDLLIHV 180
NSKFLPPARLLLIRLIDGKLPVLNFDL+KL+I IANALLGLTSVVGRFEWTQA DLLIHV
Sbjct: 121 NSKFLPPARLLLIRLIDGKLPVLNFDLSKLYISIANALLGLTSVVGRFEWTQALDLLIHV 180
Query: 181 YSTQFMNLGFGCAVDAFYLFAQKGIFPSLKTCNFLLSSLVKANELEKCCEVFEVMSRGVR 240
YSTQF NLGFGCAVDAFYLFA+KGIFPSLKTCNFLLSSLVKANELEKCCEVFEVMSRGVR
Sbjct: 181 YSTQFRNLGFGCAVDAFYLFARKGIFPSLKTCNFLLSSLVKANELEKCCEVFEVMSRGVR 240
Query: 241 PDVFLFTN------------------------------------------NGRLDDAFKL 300
PDVFLFTN NGRLDDAFKL
Sbjct: 241 PDVFLFTNVINALCKGGKMENAIELFLKMEKSGISPNVVTYNSIIHGFCQNGRLDDAFKL 300
Query: 301 KEKMIIEGVKPSLITYSVLINGLTKLEKFDEANHVLNEMVDTGFVPNAVVYNTLIDGYCK 360
KEKMIIEGVKPSLITYSVLINGLTKLEKFDEANHVLNEMVDTGFVPNAVVYNTLIDGYCK
Sbjct: 301 KEKMIIEGVKPSLITYSVLINGLTKLEKFDEANHVLNEMVDTGFVPNAVVYNTLIDGYCK 360
Query: 361 MGNINEALKIRDVMISKNITHTSVTLYSLMLGFCKSNQIERAENSLEEILSQGLSINRVT 420
MGNINEALKIRDVMISKNITHTSVTLYSLM+GFCKSNQI+ AENSLEEILSQGLSINRVT
Sbjct: 361 MGNINEALKIRDVMISKNITHTSVTLYSLMIGFCKSNQIKLAENSLEEILSQGLSINRVT 420
Query: 421 CYSVIHWLCTKSRFDSALRFTMVMLSKNFRPSDQLLTILVCGLCKDGKHLDATELWFRLF 480
CYSVIHWLCTKSRFDSALRFTMVMLSKNFR SDQLLTILVCGLCKDGKHLDATELWFRL
Sbjct: 421 CYSVIHWLCTKSRFDSALRFTMVMLSKNFRLSDQLLTILVCGLCKDGKHLDATELWFRLL 480
Query: 481 EKGSPASTATSNALIHGLCGAGNLQEAVRILKEMLERGFPLDRITYNTLILGYCKAGKVE 540
EKGSPASTATSNALIHGLCGAGNLQEAVRILKEMLERGFPLDRITYNTLILGYCKAGKVE
Sbjct: 481 EKGSPASTATSNALIHGLCGAGNLQEAVRILKEMLERGFPLDRITYNTLILGYCKAGKVE 540
Query: 541 ECFRLIDEMTKLGIEPDIYTCNLLLHGLCNAGNLDGAIKLWDEFKANGLVSNVYTYGVMM 600
ECFRL D+MTKLGIE DIYTCN LLHGLCNAG LDGAIKLWDEFKANGLVSNVYTYGVMM
Sbjct: 541 ECFRLKDKMTKLGIETDIYTCNFLLHGLCNAGKLDGAIKLWDEFKANGLVSNVYTYGVMM 600
Query: 601 DGYCKANRMEDVEELFNEMVTKKMELSTIVYNILIRANCHSGNVVAALQVRDDMKSKGMF 660
DGYCKA RMEDVEELFNEMVTKKMELSTIVYNILIRANCHSGNVVAAL+ DDMKSKGMF
Sbjct: 601 DGYCKAKRMEDVEELFNEMVTKKMELSTIVYNILIRANCHSGNVVAALRFCDDMKSKGMF 660
Query: 661 PTCSTYSSLIHGMCNVGRVEEAKQLIDEMRGEGLLTNVVCYTALIGGYCKLGRMDIAEAT 720
PTCSTYSSLIHGMCNVGRVEEAKQLIDEMR EGLLTNVVCYTALIGGYCKLGRMDIAEAT
Sbjct: 661 PTCSTYSSLIHGMCNVGRVEEAKQLIDEMREEGLLTNVVCYTALIGGYCKLGRMDIAEAT 720
Query: 721 LLEMISFNIRPNKFTYTVMIDGYCKLGNMEEANKLLSKMKESGIVPDVVTYNTLSNGLYK 780
L EMISFNIRPNKFTYTVMIDGYCKLGNMEEANKLLSKMKESGIVPDVVTYNTL+NGLYK
Sbjct: 721 LHEMISFNIRPNKFTYTVMIDGYCKLGNMEEANKLLSKMKESGIVPDVVTYNTLTNGLYK 780
BLAST of Carg13153 vs. ExPASy Swiss-Prot
Match:
Q940A6 (Pentatricopeptide repeat-containing protein At4g19440, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g19440 PE=2 SV=2)
HSP 1 Score: 680.2 bits (1754), Expect = 2.7e-194
Identity = 365/787 (46.38%), Postives = 492/787 (62.52%), Query Frame = 0
Query: 29 QPHKEHHQEPPWQLQDQLLYSVSSILSNSSLDSSKCRALFPHLSPLEFDLMFFSVGLKAN 88
+P K L ++L SS+LS SLD +C+ L LSPLEFD +F K N
Sbjct: 63 RPDKSEETSSDRHLHERL----SSVLSKRSLDYEQCKQLITVLSPLEFDRLFPEFRSKVN 122
Query: 89 PKTCLNFFYFASDSFKFRFTIRSYCILILLLINSKFLPPARLLLIRLIDGKLPVLNFDLN 148
PKT L+FF ASDSF F F++RSYC+LI LL+++ L AR++LIRLI+G +PVL L
Sbjct: 123 PKTALDFFRLASDSFSFSFSLRSYCLLIGLLLDANLLSAARVVLIRLINGNVPVLPCGLR 182
Query: 149 KLHIEIANALLGLTSVVGRFEWTQAFDLLIHVYSTQFMNLGFGCAVDAFYLFAQKGIFPS 208
+ IA+A+ L+ + DLLI VY TQF G A+D F + A KG+FPS
Sbjct: 183 DSRVAIADAMASLSLCFDEEIRRKMSDLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPS 242
Query: 209 LKTCNFLLSSLVKANELEKCCEVFEVMSRGVRPDVFLFTNN------------------- 268
TCN LL+SLV+ANE +KCCE F+V+ +GV PDV+LFT
Sbjct: 243 KTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSK 302
Query: 269 -----------------------GRLDDAFKLKEKMIIEGVKPSLITYSVLINGLTKLEK 328
GR D+AF KEKM+ G++P+LITYS+L+ GLT+ ++
Sbjct: 303 MEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKR 362
Query: 329 FDEANHVLNEMVDTGFVPNAVVYNTLIDGYCKMGNINEALKIRDVMISKNITHTSVTLYS 388
+A VL EM GF PN +VYN LID + + G++N+A++I+D+M+SK ++ TS T +
Sbjct: 363 IGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNT 422
Query: 389 LMLGFCKSNQIERAENSLEEILSQGLSINRVTCYSVIHWLCTKSRFDSALRFTMVMLSKN 448
L+ G+CK+ Q + AE L+E+LS G ++N+ + SVI LC+ FDSALRF ML +N
Sbjct: 423 LIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 482
Query: 449 FRPSDQLLTILVCGLCKDGKHLDATELWFRLFEKGSPASTATSNALIHGLCGAGNLQEAV 508
P LLT L+ GLCK GKH A ELWF+ KG T TSNAL+HGLC AG L EA
Sbjct: 483 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAF 542
Query: 509 RILKEMLERGFPLDRITYNTLILGYCKAGKVEECFRLIDEMTKLGIEPDIYTCNLLLHGL 568
RI KE+L RG +DR++YNTLI G C K++E F +DEM K G++PD YT ++L+ GL
Sbjct: 543 RIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGL 602
Query: 569 CNAGNLDGAIKLWDEFKANGLVSNVYTYGVMMDGYCKANRMEDVEELFNEMVTKKMELST 628
N ++ AI+ WD+ K NG++ +VYTY VM+DG CKA R E+ +E F+EM++K ++ +T
Sbjct: 603 FNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNT 662
Query: 629 IVYNILIRANCHSGNVVAALQVRDDMKSKGMFPTCSTYSSLIHGMCNVGRVEEAKQLIDE 688
+VYN LIRA C SG + AL++R+DMK KG+ P +TY+SLI GM + RVEEAK L +E
Sbjct: 663 VVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEE 722
Query: 689 MRGEGLLTNVVCYTALIGGYCKLGRMDIAEATLLEMISFNIRPNKFTYTVMIDGYCKLGN 748
MR EGL NV YTALI GY KLG+M E L EM S N+ PNK TYTVMI GY + GN
Sbjct: 723 MRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGN 782
Query: 749 MEEANKLLSKMKESGIVPDVVTYNTLSNGLYKGKDMDKAYKICDQMSTAGLSLDEITYTT 774
+ EA++LL++M+E GIVPD +TY G K + +A+K DE Y
Sbjct: 783 VTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK----------GSDEENYAA 835
BLAST of Carg13153 vs. ExPASy Swiss-Prot
Match:
Q9FJE6 (Putative pentatricopeptide repeat-containing protein At5g59900 OS=Arabidopsis thaliana OX=3702 GN=At5g59900 PE=3 SV=1)
HSP 1 Score: 289.7 bits (740), Expect = 1.0e-76
Identity = 177/579 (30.57%), Postives = 284/579 (49.05%), Query Frame = 0
Query: 201 AQKGIFPSLKTCNFLLSSLVKANEL--------EKCCEVFEVMSRGVRPDVFLFTNNGRL 260
A K + P + T L+ L K E E C F V V G++
Sbjct: 289 AGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKI 348
Query: 261 DDAFKLKEKMIIEGVKPSLITYSVLINGLTKLEKFDEANHVLNEMVDTGFVPNAVVYNTL 320
++A L ++++ GV P+L Y+ LI+ L K KF EA + + M G PN V Y+ L
Sbjct: 349 EEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSIL 408
Query: 321 IDGYCKMGNINEALKIRDVMISKNITHTSVTLYSLMLGFCKSNQIERAENSLEEILSQGL 380
ID +C+ G ++ AL M+ + + SL+ G CK I AE + E++++ L
Sbjct: 409 IDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKL 468
Query: 381 SINRVTCYSVIHWLCTKSRFDSALRFTMVMLSKNFRPSDQLLTILVCGLCKDGKHLDATE 440
VT S++ C+K + + ALR M K PS T L+ GL + G DA +
Sbjct: 469 EPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVK 528
Query: 441 LWFRLFEKGSPASTATSNALIHGLCGAGNLQEAVRILKEMLERGFPLDRITYNTLILGYC 500
L+ + E + T N +I G C G++ +A LKEM E+G D +Y LI G C
Sbjct: 529 LFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLC 588
Query: 501 KAGKVEECFRLIDEMTKLGIEPDIYTCNLLLHGLCNAGNLDGAIKLWDEFKANGLVSNVY 560
G+ E +D + K E + LLHG C G L+ A+ + E G+ ++
Sbjct: 589 LTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLV 648
Query: 561 TYGVMMDGYCKANRMEDVEELFNEMVTKKMELSTIVYNILIRANCHSGNVVAALQVRDDM 620
YGV++DG K + L EM + ++ ++Y +I A +G+ A + D M
Sbjct: 649 CYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLM 708
Query: 621 KSKGMFPTCSTYSSLIHGMCNVGRVEEAKQLIDEMRGEGLLTNVVCYTALIGGYCKLGRM 680
++G P TY+++I+G+C G V EA+ L +M+ + N V Y + K G +
Sbjct: 709 INEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK-GEV 768
Query: 681 DIAEAT-LLEMISFNIRPNKFTYTVMIDGYCKLGNMEEANKLLSKMKESGIVPDVVTYNT 740
D+ +A L I + N TY ++I G+C+ G +EEA++L+++M G+ PD +TY T
Sbjct: 769 DMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTT 828
Query: 741 LSNGLYKGKDMDKAYKICDQMSTAGLSLDEITYTTLVHG 771
+ N L + D+ KA ++ + M+ G+ D + Y TL+HG
Sbjct: 829 MINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHG 866
BLAST of Carg13153 vs. ExPASy Swiss-Prot
Match:
Q6NQ83 (Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22470 PE=1 SV=1)
HSP 1 Score: 288.1 bits (736), Expect = 3.0e-76
Identity = 154/507 (30.37%), Postives = 264/507 (52.07%), Query Frame = 0
Query: 262 MIIEGVKPSLITYSVLINGLTKLEKFDEANHVLNEMVDTGFVPNAVVYNTLIDGYCKMGN 321
M + G++ + T +++IN + +K A VL G+ P+ + ++TL++G+C G
Sbjct: 96 MELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGR 155
Query: 322 INEALKIRDVMISKNITHTSVTLYSLMLGFCKSNQIERAENSLEEILSQGLSINRVTCYS 381
++EA+ + D M+ VT+ +L+ G C ++ A ++ ++ G + VT
Sbjct: 156 VSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGP 215
Query: 382 VIHWLCTKSRFDSALRFTMVMLSKNFRPSDQLLTILVCGLCKDGKHLDATELWFRLFEKG 441
V++ LC AL M +N + S +I++ LCKDG DA L+ + KG
Sbjct: 216 VLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG 275
Query: 442 SPASTATSNALIHGLCGAGNLQEAVRILKEMLERGFPLDRITYNTLILGYCKAGKVEECF 501
A T ++LI GLC G + ++L+EM+ R D +T++ LI + K GK+ E
Sbjct: 276 IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAK 335
Query: 502 RLIDEMTKLGIEPDIYTCNLLLHGLCNAGNLDGAIKLWDEFKANGLVSNVYTYGVMMDGY 561
L +EM GI PD T N L+ G C L A +++D + G ++ TY ++++ Y
Sbjct: 336 ELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSY 395
Query: 562 CKANRMEDVEELFNEMVTKKMELSTIVYNILIRANCHSGNVVAALQVRDDMKSKGMFPTC 621
CKA R++D LF E+ +K + +TI YN L+ C SG + AA ++ +M S+G+ P+
Sbjct: 396 CKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSV 455
Query: 622 STYSSLIHGMCNVGRVEEAKQLIDEMRGEGLLTNVVCYTALIGGYCKLGRMDIAEATLLE 681
TY L+ G+C+ G + +A ++ ++M+ + + Y +I G C ++D A +
Sbjct: 456 VTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCS 515
Query: 682 MISFNIRPNKFTYTVMIDGYCKLGNMEEANKLLSKMKESGIVPDVVTYNTLSNGLYKGKD 741
+ ++P+ TY VMI G CK G++ EA+ L KMKE G PD TYN L G
Sbjct: 516 LSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSG 575
Query: 742 MDKAYKICDQMSTAGLSLDEITYTTLV 769
+ + ++ ++M G S D T ++
Sbjct: 576 LISSVELIEEMKVCGFSADSSTIKMVI 602
BLAST of Carg13153 vs. ExPASy Swiss-Prot
Match:
Q9LFC5 (Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana OX=3702 GN=At5g01110 PE=2 SV=1)
HSP 1 Score: 287.3 bits (734), Expect = 5.0e-76
Identity = 192/660 (29.09%), Postives = 321/660 (48.64%), Query Frame = 0
Query: 105 FRFTIRSYCILILLLINSKFLPPARLLLIRLIDGKLPVLNFDLNKLHIEIANALLGLTSV 164
F+ T S +I +L+ S L A+ L+R+I +EI N+L S
Sbjct: 109 FKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRS--------GVSRLEIVNSLDSTFSN 168
Query: 165 VGRFEWTQAFDLLIHVYSTQFMNLGFGCAVDAFYLFAQKGIFPSLKTCNFLLSSLVKANE 224
G + FDLLI Y Q L A +AF L KG S+ CN L+ SLV+
Sbjct: 169 CGSND--SVFDLLIRTY-VQARKLRE--AHEAFTLLRSKGFTVSIDACNALIGSLVRIGW 228
Query: 225 LEKCCEVFEVMSRGVRPDVFLFTNNGRLDDAFKLKEKMIIEGVKPSLITYSVLINGLTKL 284
+E V++ +SR GV ++ T ++++N L K
Sbjct: 229 VELAWGVYQEISR---------------------------SGVGINVYTLNIMVNALCKD 288
Query: 285 EKFDEANHVLNEMVDTGFVPNAVVYNTLIDGYCKMGNINEALKIRDVMISKNITHTSVTL 344
K ++ L+++ + G P+ V YNTLI Y G + EA ++ + M K + T
Sbjct: 289 GKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTY 348
Query: 345 YSLMLGFCKSNQIERAENSLEEILSQGLSINRVTCYSVIHWLCTKSRFDSALRFTMVMLS 404
+++ G CK + ERA+ E+L GLS + T S++ C K + M S
Sbjct: 349 NTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRS 408
Query: 405 KNFRPSDQLLTILVCGLCKDGKHLDATELWFR-LFEKGSPASTATSNALIHGLCGAGNLQ 464
++ P + ++ + G +LD ++F + E G LI G C G +
Sbjct: 409 RDVVPDLVCFSSMMSLFTRSG-NLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMIS 468
Query: 465 EAVRILKEMLERGFPLDRITYNTLILGYCKAGKVEECFRLIDEMTKLGIEPDIYTCNLLL 524
A+ + EML++G +D +TYNT++ G CK + E +L +EMT+ + PD YT +L+
Sbjct: 469 VAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILI 528
Query: 525 HGLCNAGNLDGAIKLWDEFKANGLVSNVYTYGVMMDGYCKANRMEDVEELFNEMVTKKME 584
G C GNL A++L+ + K + +V TY ++DG+ K ++ +E++ +MV+K++
Sbjct: 529 DGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEIL 588
Query: 585 LSTIVYNILIRANCHSGNVVAALQVRDDMKSKGMFPTCSTYSSLIHGMCNVGRVEEAKQL 644
+ I Y+IL+ A C G++ A +V D+M SK + PT +S+I G C G + +
Sbjct: 589 PTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESF 648
Query: 645 IDEMRGEGLLTNVVCYTALIGGYCKLGRMDIAEATL--LEMISFNIRPNKFTYTVMIDGY 704
+++M EG + + + Y LI G+ + M A + +E + P+ FTY ++ G+
Sbjct: 649 LEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGF 708
Query: 705 CKLGNMEEANKLLSKMKESGIVPDVVTYNTLSNGLYKGKDMDKAYKICDQMSTAGLSLDE 762
C+ M+EA +L KM E G+ PD TY + NG ++ +A++I D+M G S D+
Sbjct: 709 CRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727
BLAST of Carg13153 vs. ExPASy Swiss-Prot
Match:
Q9LVQ5 (Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX=3702 GN=At5g55840 PE=3 SV=2)
HSP 1 Score: 287.3 bits (734), Expect = 5.0e-76
Identity = 174/578 (30.10%), Postives = 279/578 (48.27%), Query Frame = 0
Query: 202 QKGIFPSLKTCNFLLSSLVKANELEKCCEVFEVM-SRGVRPDVFLFT-------NNGRLD 261
+ G P++ T N +L K + E+ + M S+GV DV + + R+
Sbjct: 221 KSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIA 280
Query: 262 DAFKLKEKMIIEGVKPSLITYSVLINGLTKLEKFDEANHVLNEMVDTGFVPNAVVYNTLI 321
+ L M + P+ +TY+ LING + K A+ +LNEM+ G PN V +N LI
Sbjct: 281 KGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALI 340
Query: 322 DGYCKMGNINEALKIRDVMISKNITHTSVTLYSLMLGFCKSNQIERAENSLEEILSQGLS 381
DG+ GN EALK+ +M +K +T + V+ L+ G CK+ + + A + G+
Sbjct: 341 DGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVC 400
Query: 382 INRVTCYSVIHWLCTKSRFDSALRFTMVMLSKNFRPSDQLLTILVCGLCKDGKHLDATEL 441
+ R+T +I LC D A+ M P + L+ G CK G+ A E+
Sbjct: 401 VGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEI 460
Query: 442 WFRLFEKGSPASTATSNALIHGLCGAGNLQEAVRILKEMLERGFPLDRITYNTLILGYCK 501
R++ G + + LI+ C G L+EA+RI + M+ G D T+N L+ CK
Sbjct: 461 VCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCK 520
Query: 502 AGKVEECFRLIDEMTKLGIEPDIYTCNLLLHGLCNAGNLDGAIKLWDEFKANGLVSNVYT 561
AGKV E + MT GI P+ + + L++G N+G A ++DE G +T
Sbjct: 521 AGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFT 580
Query: 562 YGVMMDGYCKANRMEDVEELFNEMVTKKMELSTIVYNILIRANCHSGNVVAALQVRDDMK 621
YG ++ G CK + + E+ + + T++YN L+ A C SGN+ A+ + +M
Sbjct: 581 YGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMV 640
Query: 622 SKGMFPTCSTYSSLIHGMCNVGRVEEAKQLIDEMRGEG-LLTNVVCYTALIGGYCKLGRM 681
+ + P TY+SLI G+C G+ A E G +L N V YT + G K G+
Sbjct: 641 QRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQW 700
Query: 682 DIAEATLLEMISFNIRPNKFTYTVMIDGYCKLGNMEEANKLLSKMKESGIVPDVVTYNTL 741
+M + P+ T MIDGY ++G +E+ N LL +M P++ TYN L
Sbjct: 701 KAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNIL 760
Query: 742 SNGLYKGKDMDKAYKICDQMSTAGLSLDEITYTTLVHG 771
+G K KD+ ++ + + G+ D++T +LV G
Sbjct: 761 LHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLG 798
BLAST of Carg13153 vs. ExPASy TrEMBL
Match:
A0A6J1FWH7 (pentatricopeptide repeat-containing protein At4g19440, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111447546 PE=4 SV=1)
HSP 1 Score: 1535.8 bits (3975), Expect = 0.0e+00
Identity = 768/822 (93.43%), Postives = 771/822 (93.80%), Query Frame = 0
Query: 1 MHLTRFKINKTVPVLFPFSRRLACVLSTQPHKEHHQEPPWQLQDQLLYSVSSILSNSSLD 60
MHLTRFKINKT+PVLFPFSRRLACVLSTQPHKEHHQEPPWQLQDQLLYSVSSILSNSSLD
Sbjct: 1 MHLTRFKINKTIPVLFPFSRRLACVLSTQPHKEHHQEPPWQLQDQLLYSVSSILSNSSLD 60
Query: 61 SSKCRALFPHLSPLEFDLMFFSVGLKANPKTCLNFFYFASDSFKFRFTIRSYCILILLLI 120
SSKCRALFPHLSPLEFD MFFSVGLKANPKTCLNFFYFASDSFKFRFTIRSYCILILLLI
Sbjct: 61 SSKCRALFPHLSPLEFDRMFFSVGLKANPKTCLNFFYFASDSFKFRFTIRSYCILILLLI 120
Query: 121 NSKFLPPARLLLIRLIDGKLPVLNFDLNKLHIEIANALLGLTSVVGRFEWTQAFDLLIHV 180
NSKFLPPARLLLIRLIDGKLP+LNFDLNKLHIEIAN LLGLTSVVGRFEWTQAFDLLIHV
Sbjct: 121 NSKFLPPARLLLIRLIDGKLPLLNFDLNKLHIEIANTLLGLTSVVGRFEWTQAFDLLIHV 180
Query: 181 YSTQFMNLGFGCAVDAFYLFAQKGIFPSLKTCNFLLSSLVKANELEKCCEVFEVMSRGVR 240
YSTQF NLGFGCA DAFYLFAQKGIFPSLKTCNFLLSSLVKANELEKCCEVFEVMSRGVR
Sbjct: 181 YSTQFRNLGFGCAFDAFYLFAQKGIFPSLKTCNFLLSSLVKANELEKCCEVFEVMSRGVR 240
Query: 241 PDVFLFTN------------------------------------------NGRLDDAFKL 300
PDVFLFTN NGRLDDAFKL
Sbjct: 241 PDVFLFTNVINALCKGGKMENAIELFLKMEKSGISPNVVTYNSIIHGFCQNGRLDDAFKL 300
Query: 301 KEKMIIEGVKPSLITYSVLINGLTKLEKFDEANHVLNEMVDTGFVPNAVVYNTLIDGYCK 360
KEKMIIEGVKPSLITYSVLINGLTKLE FD+ANHVLNEMVDTGFVPNAVVYNTLIDGYCK
Sbjct: 301 KEKMIIEGVKPSLITYSVLINGLTKLENFDKANHVLNEMVDTGFVPNAVVYNTLIDGYCK 360
Query: 361 MGNINEALKIRDVMISKNITHTSVTLYSLMLGFCKSNQIERAENSLEEILSQGLSINRVT 420
MGNINEALKIRDVMISKNITHTSVTLYSLMLGFCKSNQIERAENSLEEILSQGLSINRVT
Sbjct: 361 MGNINEALKIRDVMISKNITHTSVTLYSLMLGFCKSNQIERAENSLEEILSQGLSINRVT 420
Query: 421 CYSVIHWLCTKSRFDSALRFTMVMLSKNFRPSDQLLTILVCGLCKDGKHLDATELWFRLF 480
CYSVIHWLCTKSRFDSALRFTMVMLSKNFRPSDQLLTILVCGLCKDGKHLDATELWFRL
Sbjct: 421 CYSVIHWLCTKSRFDSALRFTMVMLSKNFRPSDQLLTILVCGLCKDGKHLDATELWFRLL 480
Query: 481 EKGSPASTATSNALIHGLCGAGNLQEAVRILKEMLERGFPLDRITYNTLILGYCKAGKVE 540
EKGSPASTATSNALIHGLCGAGNLQEAVRILKEMLERGFP DRITYNTLILGYCKAGKVE
Sbjct: 481 EKGSPASTATSNALIHGLCGAGNLQEAVRILKEMLERGFPSDRITYNTLILGYCKAGKVE 540
Query: 541 ECFRLIDEMTKLGIEPDIYTCNLLLHGLCNAGNLDGAIKLWDEFKANGLVSNVYTYGVMM 600
ECF LIDEM KLGIEPDIYTCNLLLHGLCNAGNLDGAIKLWDEFKANGLVSNVYTYGVMM
Sbjct: 541 ECFTLIDEMIKLGIEPDIYTCNLLLHGLCNAGNLDGAIKLWDEFKANGLVSNVYTYGVMM 600
Query: 601 DGYCKANRMEDVEELFNEMVTKKMELSTIVYNILIRANCHSGNVVAALQVRDDMKSKGMF 660
DGYCKANRMEDVEELFNEMVTKKMELSTIVYNILIRANCHSGNVVAALQVRDDMKSKGMF
Sbjct: 601 DGYCKANRMEDVEELFNEMVTKKMELSTIVYNILIRANCHSGNVVAALQVRDDMKSKGMF 660
Query: 661 PTCSTYSSLIHGMCNVGRVEEAKQLIDEMRGEGLLTNVVCYTALIGGYCKLGRMDIAEAT 720
PTCSTYSSLIHGMCNVGRVEEAKQLIDEMRGEGLLTNVVCYTALIGGYCKLGRMDIAEAT
Sbjct: 661 PTCSTYSSLIHGMCNVGRVEEAKQLIDEMRGEGLLTNVVCYTALIGGYCKLGRMDIAEAT 720
Query: 721 LLEMISFNIRPNKFTYTVMIDGYCKLGNMEEANKLLSKMKESGIVPDVVTYNTLSNGLYK 780
LLEMISFNIRPNKFTYTVMIDGYCKLGNMEEANKLLSKMKESGIVPDVVTYNTLSNGLYK
Sbjct: 721 LLEMISFNIRPNKFTYTVMIDGYCKLGNMEEANKLLSKMKESGIVPDVVTYNTLSNGLYK 780
BLAST of Carg13153 vs. ExPASy TrEMBL
Match:
A0A6J1ISC0 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g19440, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111478853 PE=4 SV=1)
HSP 1 Score: 1493.0 bits (3864), Expect = 0.0e+00
Identity = 751/822 (91.36%), Postives = 760/822 (92.46%), Query Frame = 0
Query: 1 MHLTRFKINKTVPVLFPFSRRLACVLSTQPHKEHHQEPPWQLQDQLLYSVSSILSNSSLD 60
MHLTRFKINKTVPVLFPFSRRLA VLSTQPHKEHHQEPPWQLQD LLYSVSSILSNSSLD
Sbjct: 1 MHLTRFKINKTVPVLFPFSRRLASVLSTQPHKEHHQEPPWQLQDXLLYSVSSILSNSSLD 60
Query: 61 SSKCRALFPHLSPLEFDLMFFSVGLKANPKTCLNFFYFASDSFKFRFTIRSYCILILLLI 120
SSKCRALFPHL PLEFD MFFSVGLKANPKTCLNFFYFASDSFKFRFTIRSYCILILLLI
Sbjct: 61 SSKCRALFPHLFPLEFDRMFFSVGLKANPKTCLNFFYFASDSFKFRFTIRSYCILILLLI 120
Query: 121 NSKFLPPARLLLIRLIDGKLPVLNFDLNKLHIEIANALLGLTSVVGRFEWTQAFDLLIHV 180
NSKFLPPARLLLIRLIDGKLPVLNFDL+KL+I IANALLGLTSVVGRFEWTQA DLLIHV
Sbjct: 121 NSKFLPPARLLLIRLIDGKLPVLNFDLSKLYISIANALLGLTSVVGRFEWTQALDLLIHV 180
Query: 181 YSTQFMNLGFGCAVDAFYLFAQKGIFPSLKTCNFLLSSLVKANELEKCCEVFEVMSRGVR 240
YSTQF NLGFGCAVDAFYLFA+KGIFPSLKTCNFLLSSLVKANELEKCCEVFEVMSRGVR
Sbjct: 181 YSTQFRNLGFGCAVDAFYLFARKGIFPSLKTCNFLLSSLVKANELEKCCEVFEVMSRGVR 240
Query: 241 PDVFLFTN------------------------------------------NGRLDDAFKL 300
PDVFLFTN NGRLDDAFKL
Sbjct: 241 PDVFLFTNVINALCKGGKMENAIELFLKMEKSGISPNVVTYNSIIHGFCQNGRLDDAFKL 300
Query: 301 KEKMIIEGVKPSLITYSVLINGLTKLEKFDEANHVLNEMVDTGFVPNAVVYNTLIDGYCK 360
KEKMIIEGVKPSLITYSVLINGLTKLEKFDEANHVLNEMVDTGFVPNAVVYNTLIDGYCK
Sbjct: 301 KEKMIIEGVKPSLITYSVLINGLTKLEKFDEANHVLNEMVDTGFVPNAVVYNTLIDGYCK 360
Query: 361 MGNINEALKIRDVMISKNITHTSVTLYSLMLGFCKSNQIERAENSLEEILSQGLSINRVT 420
MGNINEALKIRDVMISKNITHTSVTLYSLM+GFCKSNQI+ AENSLEEILSQGLSINRVT
Sbjct: 361 MGNINEALKIRDVMISKNITHTSVTLYSLMIGFCKSNQIKLAENSLEEILSQGLSINRVT 420
Query: 421 CYSVIHWLCTKSRFDSALRFTMVMLSKNFRPSDQLLTILVCGLCKDGKHLDATELWFRLF 480
CYSVIHWLCTKSRFDSALRFTMVMLSKNFR SDQLLTILVCGLCKDGKHLDATELWFRL
Sbjct: 421 CYSVIHWLCTKSRFDSALRFTMVMLSKNFRLSDQLLTILVCGLCKDGKHLDATELWFRLL 480
Query: 481 EKGSPASTATSNALIHGLCGAGNLQEAVRILKEMLERGFPLDRITYNTLILGYCKAGKVE 540
EKGSPASTATSNALIHGLCGAGNLQEAVRILKEMLERGFPLDRITYNTLILGYCKAGKVE
Sbjct: 481 EKGSPASTATSNALIHGLCGAGNLQEAVRILKEMLERGFPLDRITYNTLILGYCKAGKVE 540
Query: 541 ECFRLIDEMTKLGIEPDIYTCNLLLHGLCNAGNLDGAIKLWDEFKANGLVSNVYTYGVMM 600
ECFRL D+MTKLGIE DIYTCN LLHGLCNAG LDGAIKLWDEFKANGLVSNVYTYGVMM
Sbjct: 541 ECFRLKDKMTKLGIETDIYTCNFLLHGLCNAGKLDGAIKLWDEFKANGLVSNVYTYGVMM 600
Query: 601 DGYCKANRMEDVEELFNEMVTKKMELSTIVYNILIRANCHSGNVVAALQVRDDMKSKGMF 660
DGYCKA RMEDVEELFNEMVTKKMELSTIVYNILIRANCHSGNVVAAL+ DDMKSKGMF
Sbjct: 601 DGYCKAKRMEDVEELFNEMVTKKMELSTIVYNILIRANCHSGNVVAALRFCDDMKSKGMF 660
Query: 661 PTCSTYSSLIHGMCNVGRVEEAKQLIDEMRGEGLLTNVVCYTALIGGYCKLGRMDIAEAT 720
PTCSTYSSLIHGMCNVGRVEEAKQLIDEMR EGLLTNVVCYTALIGGYCKLGRMDIAEAT
Sbjct: 661 PTCSTYSSLIHGMCNVGRVEEAKQLIDEMREEGLLTNVVCYTALIGGYCKLGRMDIAEAT 720
Query: 721 LLEMISFNIRPNKFTYTVMIDGYCKLGNMEEANKLLSKMKESGIVPDVVTYNTLSNGLYK 780
L EMISFNIRPNKFTYTVMIDGYCKLGNMEEANKLLSKMKESGIVPDVVTYNTL+NGLYK
Sbjct: 721 LHEMISFNIRPNKFTYTVMIDGYCKLGNMEEANKLLSKMKESGIVPDVVTYNTLTNGLYK 780
BLAST of Carg13153 vs. ExPASy TrEMBL
Match:
A0A6J1ETG9 (pentatricopeptide repeat-containing protein At4g19440, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111437580 PE=4 SV=1)
HSP 1 Score: 1362.1 bits (3524), Expect = 0.0e+00
Identity = 677/822 (82.36%), Postives = 723/822 (87.96%), Query Frame = 0
Query: 1 MHLTRFKINKTVPVLFPFSRRLACVLSTQPHKEHHQEPPWQLQDQLLYSVSSILSNSSLD 60
MHLTRFKINKTVPV+FPFSR++ACVLST+PHKEHHQ+PPWQLQDQLLYSVSSILSNSSLD
Sbjct: 1 MHLTRFKINKTVPVVFPFSRQVACVLSTEPHKEHHQDPPWQLQDQLLYSVSSILSNSSLD 60
Query: 61 SSKCRALFPHLSPLEFDLMFFSVGLKANPKTCLNFFYFASDSFKFRFTIRSYCILILLLI 120
SSKCRAL PHLSP +FD +FFSVGLKANPKTCLNFFYFASDSFKFRFTIRSYC+LILLL+
Sbjct: 61 SSKCRALLPHLSPFQFDHLFFSVGLKANPKTCLNFFYFASDSFKFRFTIRSYCLLILLLV 120
Query: 121 NSKFLPPARLLLIRLIDGKLPVLNFDLNKLHIEIANALLGLTSVVGRFEWTQAFDLLIHV 180
+SKFLPPARLLLIRLIDGKLPVLN D NKLHIEIAN L GLTSVVGRFE T AFDLLIHV
Sbjct: 121 HSKFLPPARLLLIRLIDGKLPVLNSDSNKLHIEIANELFGLTSVVGRFECTHAFDLLIHV 180
Query: 181 YSTQFMNLGFGCAVDAFYLFAQKGIFPSLKTCNFLLSSLVKANELEKCCEVFEVMSRGVR 240
YSTQF NLGF AVD FYLFA+ GIFPSLKTCNFLLSSLVKANELEKCCEVFEVMS+GVR
Sbjct: 181 YSTQFRNLGFSYAVDVFYLFARNGIFPSLKTCNFLLSSLVKANELEKCCEVFEVMSQGVR 240
Query: 241 PDVFLFTN------------------------------------------NGRLDDAFKL 300
PDVFLFTN NGRL DAF+L
Sbjct: 241 PDVFLFTNVINALCKGGKMENAMELLMNMEKLGISPNVVTYNSIIHGLCQNGRLGDAFEL 300
Query: 301 KEKMIIEGVKPSLITYSVLINGLTKLEKFDEANHVLNEMVDTGFVPNAVVYNTLIDGYCK 360
KEKM IEGVKPSLITYSVLINGLTKLEKFD+AN VLNEMV GFVPNAVVYNTLIDGYCK
Sbjct: 301 KEKMTIEGVKPSLITYSVLINGLTKLEKFDKANDVLNEMVGAGFVPNAVVYNTLIDGYCK 360
Query: 361 MGNINEALKIRDVMISKNITHTSVTLYSLMLGFCKSNQIERAENSLEEILSQGLSINRVT 420
MG INEALKIRDVM+SKNIT TSVTLY+L+ GFCKSNQIE+AEN+LEEILSQG IN VT
Sbjct: 361 MGKINEALKIRDVMVSKNITPTSVTLYTLLQGFCKSNQIEQAENTLEEILSQGFPINPVT 420
Query: 421 CYSVIHWLCTKSRFDSALRFTMVMLSKNFRPSDQLLTILVCGLCKDGKHLDATELWFRLF 480
CYSVIHWLCTKSRF ALRFTMVMLSKNFRPSDQLLTILVCGLCKDGKHL+ATELWFRLF
Sbjct: 421 CYSVIHWLCTKSRFHYALRFTMVMLSKNFRPSDQLLTILVCGLCKDGKHLEATELWFRLF 480
Query: 481 EKGSPASTATSNALIHGLCGAGNLQEAVRILKEMLERGFPLDRITYNTLILGYCKAGKVE 540
EKGSPASTATSNALIHGLCGAG + EAVRILKEMLERGF LDRITYNT ILG CK GKVE
Sbjct: 481 EKGSPASTATSNALIHGLCGAGKMAEAVRILKEMLERGFSLDRITYNTFILGCCKEGKVE 540
Query: 541 ECFRLIDEMTKLGIEPDIYTCNLLLHGLCNAGNLDGAIKLWDEFKANGLVSNVYTYGVMM 600
ECFRL +EMT GI+PDIYTCNLLL+GLCNAG LD AIKLW EFKA+GL+SNV+TYGVMM
Sbjct: 541 ECFRLKEEMTNQGIQPDIYTCNLLLYGLCNAGKLDDAIKLWGEFKASGLISNVHTYGVMM 600
Query: 601 DGYCKANRMEDVEELFNEMVTKKMELSTIVYNILIRANCHSGNVVAALQVRDDMKSKGMF 660
D YCKANRMEDVE+LFNE+VTKKMEL++IVYNI IRA+C +GNV AALQ+RDDMKSKG+F
Sbjct: 601 DVYCKANRMEDVEKLFNELVTKKMELNSIVYNIFIRAHCRNGNVAAALQLRDDMKSKGIF 660
Query: 661 PTCSTYSSLIHGMCNVGRVEEAKQLIDEMRGEGLLTNVVCYTALIGGYCKLGRMDIAEAT 720
PTC+TYSSLIHGMCN+G VE+AK+LIDEMR EGLL NVVCYTALIGGYCKLG+MDIAEAT
Sbjct: 661 PTCATYSSLIHGMCNIGLVEDAKRLIDEMREEGLLPNVVCYTALIGGYCKLGQMDIAEAT 720
Query: 721 LLEMISFNIRPNKFTYTVMIDGYCKLGNMEEANKLLSKMKESGIVPDVVTYNTLSNGLYK 780
LEM S NIRPNK TYTVMIDGYCKLGNMEEAN LLSKMKESGIVPDVVTYN L+NG K
Sbjct: 721 FLEMTSLNIRPNKITYTVMIDGYCKLGNMEEANNLLSKMKESGIVPDVVTYNALTNGFCK 780
BLAST of Carg13153 vs. ExPASy TrEMBL
Match:
A0A6J1C854 (pentatricopeptide repeat-containing protein At4g19440, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111008305 PE=4 SV=1)
HSP 1 Score: 1358.6 bits (3515), Expect = 0.0e+00
Identity = 670/818 (81.91%), Postives = 725/818 (88.63%), Query Frame = 0
Query: 7 KINKTVPVLFPFSRRLACVLSTQPHKEHHQEPPWQLQDQLLYSVSSILSNSSLDSSKCRA 66
KINKTVPVL P SRRLACVLSTQPHKEHHQ+PPWQ QDQLLY VSS+LSNS+LDSSKCRA
Sbjct: 1 KINKTVPVLLPLSRRLACVLSTQPHKEHHQDPPWQFQDQLLYWVSSVLSNSTLDSSKCRA 60
Query: 67 LFPHLSPLEFDLMFFSVGLKANPKTCLNFFYFASDSFKFRFTIRSYCILILLLINSKFLP 126
L PHLSPLEFD +FFSVGL+ANPKTCLNFFYFAS SFKFRFTIRSYCILILLL++SKFLP
Sbjct: 61 LLPHLSPLEFDQLFFSVGLRANPKTCLNFFYFASGSFKFRFTIRSYCILILLLVHSKFLP 120
Query: 127 PARLLLIRLIDGKLPVLNFDLNK--LHIEIANALLGLTSVVGRFEWTQAFDLLIHVYSTQ 186
PARLLLIRLIDGKLPV N +LN LHIEIANA+ GLTSVVGRFEWTQAFDLLIHVYSTQ
Sbjct: 121 PARLLLIRLIDGKLPVSNSNLNSDTLHIEIANAMSGLTSVVGRFEWTQAFDLLIHVYSTQ 180
Query: 187 FMNLGFGCAVDAFYLFAQKGIFPSLKTCNFLLSSLVKANELEKCCEVFEVMSRGVRPDVF 246
F NLGFGCAVD FYLFA+KGIFPSLKTCNFLLSSLVK NELEKCCEVFEVMS+GV PDVF
Sbjct: 181 FRNLGFGCAVDVFYLFARKGIFPSLKTCNFLLSSLVKGNELEKCCEVFEVMSQGVCPDVF 240
Query: 247 LFTN------------------------------------------NGRLDDAFKLKEKM 306
LFTN NGRLDDAF+ KEKM
Sbjct: 241 LFTNAINALCKGGKMENAIELFMKMEKLDISPNVVTYNSIIHGLCQNGRLDDAFEFKEKM 300
Query: 307 IIEGVKPSLITYSVLINGLTKLEKFDEANHVLNEMVDTGFVPNAVVYNTLIDGYCKMGNI 366
IEGVKPSLITYSVLINGLTKLEKFD+A HVLN+M+D GFVPNAVVYNTLIDGYCKMGNI
Sbjct: 301 TIEGVKPSLITYSVLINGLTKLEKFDKAMHVLNKMIDAGFVPNAVVYNTLIDGYCKMGNI 360
Query: 367 NEALKIRDVMISKNITHTSVTLYSLMLGFCKSNQIERAENSLEEILSQGLSINRVTCYSV 426
NEAL+IRDVMISKNIT TSVTLY+LM GFCKS+QI++AEN+L+EILSQGLSIN VTC+SV
Sbjct: 361 NEALRIRDVMISKNITPTSVTLYTLMQGFCKSDQIKQAENALDEILSQGLSINPVTCFSV 420
Query: 427 IHWLCTKSRFDSALRFTMVMLSKNFRPSDQLLTILVCGLCKDGKHLDATELWFRLFEKGS 486
IHWLCTKSRF SAL+FTM MLS+NFRPSDQLLTILVCGLCKDGKH +ATELWFRL EKGS
Sbjct: 421 IHWLCTKSRFHSALQFTMKMLSRNFRPSDQLLTILVCGLCKDGKHSEATELWFRLLEKGS 480
Query: 487 PASTATSNALIHGLCGAGNLQEAVRILKEMLERGFPLDRITYNTLILGYCKAGKVEECFR 546
PASTATSNAL+HGLCG GN+Q AVRILKEML+RGFPLD+ITYNTLILG CK GKVEECFR
Sbjct: 481 PASTATSNALMHGLCGEGNMQGAVRILKEMLDRGFPLDQITYNTLILGCCKEGKVEECFR 540
Query: 547 LIDEMTKLGIEPDIYTCNLLLHGLCNAGNLDGAIKLWDEFKANGLVSNVYTYGVMMDGYC 606
DEMTK GIEPDIYTCN LLHGLCNAG LD AIKLWDEFKA+GLVSNV+TYGV+MDG+C
Sbjct: 541 FKDEMTKQGIEPDIYTCNFLLHGLCNAGKLDDAIKLWDEFKASGLVSNVHTYGVLMDGHC 600
Query: 607 KANRMEDVEELFNEMVTKKMELSTIVYNILIRANCHSGNVVAALQVRDDMKSKGMFPTCS 666
KANRMEDV++LFNE+VTKKME +TIVYNILIRA CH+GN+VAA Q+RD+MK KG+FPTC+
Sbjct: 601 KANRMEDVKKLFNELVTKKMEPNTIVYNILIRAYCHNGNIVAAFQLRDEMKGKGIFPTCA 660
Query: 667 TYSSLIHGMCNVGRVEEAKQLIDEMRGEGLLTNVVCYTALIGGYCKLGRMDIAEATLLEM 726
TYSSLIHGMCN+GRVE+AK L+DEMRGEGLL NVVCYTALIGGYCKLG+MDIAEATLLEM
Sbjct: 661 TYSSLIHGMCNIGRVEDAKHLMDEMRGEGLLPNVVCYTALIGGYCKLGQMDIAEATLLEM 720
Query: 727 ISFNIRPNKFTYTVMIDGYCKLGNMEEANKLLSKMKESGIVPDVVTYNTLSNGLYKGKDM 781
SF I+PNKFTYTVMIDGYCKLGNMEEANKLLSKMKESGI+PDVVTYN L+NG KGKDM
Sbjct: 721 TSFKIKPNKFTYTVMIDGYCKLGNMEEANKLLSKMKESGIIPDVVTYNALTNGFCKGKDM 780
BLAST of Carg13153 vs. ExPASy TrEMBL
Match:
A0A6J1J2L6 (pentatricopeptide repeat-containing protein At4g19440, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111482844 PE=4 SV=1)
HSP 1 Score: 1353.6 bits (3502), Expect = 0.0e+00
Identity = 672/822 (81.75%), Postives = 719/822 (87.47%), Query Frame = 0
Query: 1 MHLTRFKINKTVPVLFPFSRRLACVLSTQPHKEHHQEPPWQLQDQLLYSVSSILSNSSLD 60
MHLTRFKINKT+PV+FPFSR++ACVLST+PHKEHHQ+PPWQLQDQLLYSVSSILSNSSLD
Sbjct: 1 MHLTRFKINKTLPVVFPFSRQVACVLSTEPHKEHHQDPPWQLQDQLLYSVSSILSNSSLD 60
Query: 61 SSKCRALFPHLSPLEFDLMFFSVGLKANPKTCLNFFYFASDSFKFRFTIRSYCILILLLI 120
SSKCRAL PHLSP +FD +FFSVGLKANPKTCLNFFYFASDSFKFRFTIRSYC+LILLL+
Sbjct: 61 SSKCRALLPHLSPFQFDQLFFSVGLKANPKTCLNFFYFASDSFKFRFTIRSYCLLILLLV 120
Query: 121 NSKFLPPARLLLIRLIDGKLPVLNFDLNKLHIEIANALLGLTSVVGRFEWTQAFDLLIHV 180
+SKFLPPARLLLIRLIDGKLPVLN D NKLHIEIAN L GLTSVVGRFE T AFDLLIHV
Sbjct: 121 HSKFLPPARLLLIRLIDGKLPVLNSDSNKLHIEIANELFGLTSVVGRFECTHAFDLLIHV 180
Query: 181 YSTQFMNLGFGCAVDAFYLFAQKGIFPSLKTCNFLLSSLVKANELEKCCEVFEVMSRGVR 240
YSTQF NL F AVD FYLFA+KGIFPSLKTCNFLLSSLVKANELEKCCEVFEVMS+GVR
Sbjct: 181 YSTQFRNLCFSYAVDVFYLFARKGIFPSLKTCNFLLSSLVKANELEKCCEVFEVMSQGVR 240
Query: 241 PDVFLFTN------------------------------------------NGRLDDAFKL 300
PDVFLFTN NGRL DAF+L
Sbjct: 241 PDVFLFTNVINALCKGGKMENAMELLMNMEKLGISPNVVTYNSVIHGLCQNGRLGDAFEL 300
Query: 301 KEKMIIEGVKPSLITYSVLINGLTKLEKFDEANHVLNEMVDTGFVPNAVVYNTLIDGYCK 360
KEKM IEGVKPSLITYSVLINGLTKLEKFD+AN VLNEMVD GFVPNAVVYNTLIDGYCK
Sbjct: 301 KEKMTIEGVKPSLITYSVLINGLTKLEKFDKANDVLNEMVDAGFVPNAVVYNTLIDGYCK 360
Query: 361 MGNINEALKIRDVMISKNITHTSVTLYSLMLGFCKSNQIERAENSLEEILSQGLSINRVT 420
MG INEALKIRDVM+SKNIT TSVT Y+L+ GFCKSNQIE+A+N+LEEILSQG IN VT
Sbjct: 361 MGKINEALKIRDVMVSKNITPTSVTFYTLLQGFCKSNQIEQAQNTLEEILSQGFPINPVT 420
Query: 421 CYSVIHWLCTKSRFDSALRFTMVMLSKNFRPSDQLLTILVCGLCKDGKHLDATELWFRLF 480
CYSVIHWLCTK RF ALRFT VML KNFRPSDQLLTILVCGLCKDGKHL+ATELWFRL
Sbjct: 421 CYSVIHWLCTKFRFHYALRFTTVMLLKNFRPSDQLLTILVCGLCKDGKHLEATELWFRLL 480
Query: 481 EKGSPASTATSNALIHGLCGAGNLQEAVRILKEMLERGFPLDRITYNTLILGYCKAGKVE 540
EKGSPASTATSNALIHGLCGAG + EAVRILKEMLERGF LDRITYNTLILG CK GKVE
Sbjct: 481 EKGSPASTATSNALIHGLCGAGKMAEAVRILKEMLERGFSLDRITYNTLILGCCKEGKVE 540
Query: 541 ECFRLIDEMTKLGIEPDIYTCNLLLHGLCNAGNLDGAIKLWDEFKANGLVSNVYTYGVMM 600
ECFRL +EMT GI+PDIYTCN LL+GLCNAG LD AIKLWDEFKA+GL+SNV+TYGVMM
Sbjct: 541 ECFRLKEEMTNQGIQPDIYTCNFLLYGLCNAGKLDDAIKLWDEFKASGLISNVHTYGVMM 600
Query: 601 DGYCKANRMEDVEELFNEMVTKKMELSTIVYNILIRANCHSGNVVAALQVRDDMKSKGMF 660
D YCKANRMEDVE+LFNE+VTKKMEL++IVYNI IRA+C +GNV AALQ+RDDMKSKG+F
Sbjct: 601 DAYCKANRMEDVEKLFNELVTKKMELNSIVYNIFIRAHCRNGNVAAALQLRDDMKSKGIF 660
Query: 661 PTCSTYSSLIHGMCNVGRVEEAKQLIDEMRGEGLLTNVVCYTALIGGYCKLGRMDIAEAT 720
PTC+TYSSLIHGMCN+GRVE+AK LIDEMR EGLL NVVCYTALIGGYCKLG+MDIAEAT
Sbjct: 661 PTCATYSSLIHGMCNIGRVEDAKHLIDEMREEGLLPNVVCYTALIGGYCKLGQMDIAEAT 720
Query: 721 LLEMISFNIRPNKFTYTVMIDGYCKLGNMEEANKLLSKMKESGIVPDVVTYNTLSNGLYK 780
LEM S NI PNK TYTVMIDGYCKLGNMEEAN LLSKMKESGIVPDVVTYN L+NG K
Sbjct: 721 WLEMTSLNISPNKITYTVMIDGYCKLGNMEEANNLLSKMKESGIVPDVVTYNALTNGFCK 780
BLAST of Carg13153 vs. TAIR 10
Match:
AT4G19440.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 680.2 bits (1754), Expect = 1.9e-195
Identity = 365/787 (46.38%), Postives = 492/787 (62.52%), Query Frame = 0
Query: 29 QPHKEHHQEPPWQLQDQLLYSVSSILSNSSLDSSKCRALFPHLSPLEFDLMFFSVGLKAN 88
+P K L ++L SS+LS SLD +C+ L LSPLEFD +F K N
Sbjct: 50 RPDKSEETSSDRHLHERL----SSVLSKRSLDYEQCKQLITVLSPLEFDRLFPEFRSKVN 109
Query: 89 PKTCLNFFYFASDSFKFRFTIRSYCILILLLINSKFLPPARLLLIRLIDGKLPVLNFDLN 148
PKT L+FF ASDSF F F++RSYC+LI LL+++ L AR++LIRLI+G +PVL L
Sbjct: 110 PKTALDFFRLASDSFSFSFSLRSYCLLIGLLLDANLLSAARVVLIRLINGNVPVLPCGLR 169
Query: 149 KLHIEIANALLGLTSVVGRFEWTQAFDLLIHVYSTQFMNLGFGCAVDAFYLFAQKGIFPS 208
+ IA+A+ L+ + DLLI VY TQF G A+D F + A KG+FPS
Sbjct: 170 DSRVAIADAMASLSLCFDEEIRRKMSDLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPS 229
Query: 209 LKTCNFLLSSLVKANELEKCCEVFEVMSRGVRPDVFLFTNN------------------- 268
TCN LL+SLV+ANE +KCCE F+V+ +GV PDV+LFT
Sbjct: 230 KTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSK 289
Query: 269 -----------------------GRLDDAFKLKEKMIIEGVKPSLITYSVLINGLTKLEK 328
GR D+AF KEKM+ G++P+LITYS+L+ GLT+ ++
Sbjct: 290 MEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKR 349
Query: 329 FDEANHVLNEMVDTGFVPNAVVYNTLIDGYCKMGNINEALKIRDVMISKNITHTSVTLYS 388
+A VL EM GF PN +VYN LID + + G++N+A++I+D+M+SK ++ TS T +
Sbjct: 350 IGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNT 409
Query: 389 LMLGFCKSNQIERAENSLEEILSQGLSINRVTCYSVIHWLCTKSRFDSALRFTMVMLSKN 448
L+ G+CK+ Q + AE L+E+LS G ++N+ + SVI LC+ FDSALRF ML +N
Sbjct: 410 LIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 469
Query: 449 FRPSDQLLTILVCGLCKDGKHLDATELWFRLFEKGSPASTATSNALIHGLCGAGNLQEAV 508
P LLT L+ GLCK GKH A ELWF+ KG T TSNAL+HGLC AG L EA
Sbjct: 470 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAF 529
Query: 509 RILKEMLERGFPLDRITYNTLILGYCKAGKVEECFRLIDEMTKLGIEPDIYTCNLLLHGL 568
RI KE+L RG +DR++YNTLI G C K++E F +DEM K G++PD YT ++L+ GL
Sbjct: 530 RIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGL 589
Query: 569 CNAGNLDGAIKLWDEFKANGLVSNVYTYGVMMDGYCKANRMEDVEELFNEMVTKKMELST 628
N ++ AI+ WD+ K NG++ +VYTY VM+DG CKA R E+ +E F+EM++K ++ +T
Sbjct: 590 FNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNT 649
Query: 629 IVYNILIRANCHSGNVVAALQVRDDMKSKGMFPTCSTYSSLIHGMCNVGRVEEAKQLIDE 688
+VYN LIRA C SG + AL++R+DMK KG+ P +TY+SLI GM + RVEEAK L +E
Sbjct: 650 VVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEE 709
Query: 689 MRGEGLLTNVVCYTALIGGYCKLGRMDIAEATLLEMISFNIRPNKFTYTVMIDGYCKLGN 748
MR EGL NV YTALI GY KLG+M E L EM S N+ PNK TYTVMI GY + GN
Sbjct: 710 MRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGN 769
Query: 749 MEEANKLLSKMKESGIVPDVVTYNTLSNGLYKGKDMDKAYKICDQMSTAGLSLDEITYTT 774
+ EA++LL++M+E GIVPD +TY G K + +A+K DE Y
Sbjct: 770 VTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK----------GSDEENYAA 822
BLAST of Carg13153 vs. TAIR 10
Match:
AT4G19440.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 680.2 bits (1754), Expect = 1.9e-195
Identity = 365/787 (46.38%), Postives = 492/787 (62.52%), Query Frame = 0
Query: 29 QPHKEHHQEPPWQLQDQLLYSVSSILSNSSLDSSKCRALFPHLSPLEFDLMFFSVGLKAN 88
+P K L ++L SS+LS SLD +C+ L LSPLEFD +F K N
Sbjct: 50 RPDKSEETSSDRHLHERL----SSVLSKRSLDYEQCKQLITVLSPLEFDRLFPEFRSKVN 109
Query: 89 PKTCLNFFYFASDSFKFRFTIRSYCILILLLINSKFLPPARLLLIRLIDGKLPVLNFDLN 148
PKT L+FF ASDSF F F++RSYC+LI LL+++ L AR++LIRLI+G +PVL L
Sbjct: 110 PKTALDFFRLASDSFSFSFSLRSYCLLIGLLLDANLLSAARVVLIRLINGNVPVLPCGLR 169
Query: 149 KLHIEIANALLGLTSVVGRFEWTQAFDLLIHVYSTQFMNLGFGCAVDAFYLFAQKGIFPS 208
+ IA+A+ L+ + DLLI VY TQF G A+D F + A KG+FPS
Sbjct: 170 DSRVAIADAMASLSLCFDEEIRRKMSDLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPS 229
Query: 209 LKTCNFLLSSLVKANELEKCCEVFEVMSRGVRPDVFLFTNN------------------- 268
TCN LL+SLV+ANE +KCCE F+V+ +GV PDV+LFT
Sbjct: 230 KTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSK 289
Query: 269 -----------------------GRLDDAFKLKEKMIIEGVKPSLITYSVLINGLTKLEK 328
GR D+AF KEKM+ G++P+LITYS+L+ GLT+ ++
Sbjct: 290 MEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKR 349
Query: 329 FDEANHVLNEMVDTGFVPNAVVYNTLIDGYCKMGNINEALKIRDVMISKNITHTSVTLYS 388
+A VL EM GF PN +VYN LID + + G++N+A++I+D+M+SK ++ TS T +
Sbjct: 350 IGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNT 409
Query: 389 LMLGFCKSNQIERAENSLEEILSQGLSINRVTCYSVIHWLCTKSRFDSALRFTMVMLSKN 448
L+ G+CK+ Q + AE L+E+LS G ++N+ + SVI LC+ FDSALRF ML +N
Sbjct: 410 LIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 469
Query: 449 FRPSDQLLTILVCGLCKDGKHLDATELWFRLFEKGSPASTATSNALIHGLCGAGNLQEAV 508
P LLT L+ GLCK GKH A ELWF+ KG T TSNAL+HGLC AG L EA
Sbjct: 470 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAF 529
Query: 509 RILKEMLERGFPLDRITYNTLILGYCKAGKVEECFRLIDEMTKLGIEPDIYTCNLLLHGL 568
RI KE+L RG +DR++YNTLI G C K++E F +DEM K G++PD YT ++L+ GL
Sbjct: 530 RIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGL 589
Query: 569 CNAGNLDGAIKLWDEFKANGLVSNVYTYGVMMDGYCKANRMEDVEELFNEMVTKKMELST 628
N ++ AI+ WD+ K NG++ +VYTY VM+DG CKA R E+ +E F+EM++K ++ +T
Sbjct: 590 FNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNT 649
Query: 629 IVYNILIRANCHSGNVVAALQVRDDMKSKGMFPTCSTYSSLIHGMCNVGRVEEAKQLIDE 688
+VYN LIRA C SG + AL++R+DMK KG+ P +TY+SLI GM + RVEEAK L +E
Sbjct: 650 VVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEE 709
Query: 689 MRGEGLLTNVVCYTALIGGYCKLGRMDIAEATLLEMISFNIRPNKFTYTVMIDGYCKLGN 748
MR EGL NV YTALI GY KLG+M E L EM S N+ PNK TYTVMI GY + GN
Sbjct: 710 MRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGN 769
Query: 749 MEEANKLLSKMKESGIVPDVVTYNTLSNGLYKGKDMDKAYKICDQMSTAGLSLDEITYTT 774
+ EA++LL++M+E GIVPD +TY G K + +A+K DE Y
Sbjct: 770 VTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK----------GSDEENYAA 822
BLAST of Carg13153 vs. TAIR 10
Match:
AT5G59900.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 289.7 bits (740), Expect = 7.2e-78
Identity = 177/579 (30.57%), Postives = 284/579 (49.05%), Query Frame = 0
Query: 201 AQKGIFPSLKTCNFLLSSLVKANEL--------EKCCEVFEVMSRGVRPDVFLFTNNGRL 260
A K + P + T L+ L K E E C F V V G++
Sbjct: 289 AGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKI 348
Query: 261 DDAFKLKEKMIIEGVKPSLITYSVLINGLTKLEKFDEANHVLNEMVDTGFVPNAVVYNTL 320
++A L ++++ GV P+L Y+ LI+ L K KF EA + + M G PN V Y+ L
Sbjct: 349 EEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSIL 408
Query: 321 IDGYCKMGNINEALKIRDVMISKNITHTSVTLYSLMLGFCKSNQIERAENSLEEILSQGL 380
ID +C+ G ++ AL M+ + + SL+ G CK I AE + E++++ L
Sbjct: 409 IDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKL 468
Query: 381 SINRVTCYSVIHWLCTKSRFDSALRFTMVMLSKNFRPSDQLLTILVCGLCKDGKHLDATE 440
VT S++ C+K + + ALR M K PS T L+ GL + G DA +
Sbjct: 469 EPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVK 528
Query: 441 LWFRLFEKGSPASTATSNALIHGLCGAGNLQEAVRILKEMLERGFPLDRITYNTLILGYC 500
L+ + E + T N +I G C G++ +A LKEM E+G D +Y LI G C
Sbjct: 529 LFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLC 588
Query: 501 KAGKVEECFRLIDEMTKLGIEPDIYTCNLLLHGLCNAGNLDGAIKLWDEFKANGLVSNVY 560
G+ E +D + K E + LLHG C G L+ A+ + E G+ ++
Sbjct: 589 LTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLV 648
Query: 561 TYGVMMDGYCKANRMEDVEELFNEMVTKKMELSTIVYNILIRANCHSGNVVAALQVRDDM 620
YGV++DG K + L EM + ++ ++Y +I A +G+ A + D M
Sbjct: 649 CYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLM 708
Query: 621 KSKGMFPTCSTYSSLIHGMCNVGRVEEAKQLIDEMRGEGLLTNVVCYTALIGGYCKLGRM 680
++G P TY+++I+G+C G V EA+ L +M+ + N V Y + K G +
Sbjct: 709 INEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK-GEV 768
Query: 681 DIAEAT-LLEMISFNIRPNKFTYTVMIDGYCKLGNMEEANKLLSKMKESGIVPDVVTYNT 740
D+ +A L I + N TY ++I G+C+ G +EEA++L+++M G+ PD +TY T
Sbjct: 769 DMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTT 828
Query: 741 LSNGLYKGKDMDKAYKICDQMSTAGLSLDEITYTTLVHG 771
+ N L + D+ KA ++ + M+ G+ D + Y TL+HG
Sbjct: 829 MINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHG 866
BLAST of Carg13153 vs. TAIR 10
Match:
AT3G22470.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 288.1 bits (736), Expect = 2.1e-77
Identity = 154/507 (30.37%), Postives = 264/507 (52.07%), Query Frame = 0
Query: 262 MIIEGVKPSLITYSVLINGLTKLEKFDEANHVLNEMVDTGFVPNAVVYNTLIDGYCKMGN 321
M + G++ + T +++IN + +K A VL G+ P+ + ++TL++G+C G
Sbjct: 96 MELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGR 155
Query: 322 INEALKIRDVMISKNITHTSVTLYSLMLGFCKSNQIERAENSLEEILSQGLSINRVTCYS 381
++EA+ + D M+ VT+ +L+ G C ++ A ++ ++ G + VT
Sbjct: 156 VSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGP 215
Query: 382 VIHWLCTKSRFDSALRFTMVMLSKNFRPSDQLLTILVCGLCKDGKHLDATELWFRLFEKG 441
V++ LC AL M +N + S +I++ LCKDG DA L+ + KG
Sbjct: 216 VLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG 275
Query: 442 SPASTATSNALIHGLCGAGNLQEAVRILKEMLERGFPLDRITYNTLILGYCKAGKVEECF 501
A T ++LI GLC G + ++L+EM+ R D +T++ LI + K GK+ E
Sbjct: 276 IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAK 335
Query: 502 RLIDEMTKLGIEPDIYTCNLLLHGLCNAGNLDGAIKLWDEFKANGLVSNVYTYGVMMDGY 561
L +EM GI PD T N L+ G C L A +++D + G ++ TY ++++ Y
Sbjct: 336 ELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSY 395
Query: 562 CKANRMEDVEELFNEMVTKKMELSTIVYNILIRANCHSGNVVAALQVRDDMKSKGMFPTC 621
CKA R++D LF E+ +K + +TI YN L+ C SG + AA ++ +M S+G+ P+
Sbjct: 396 CKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSV 455
Query: 622 STYSSLIHGMCNVGRVEEAKQLIDEMRGEGLLTNVVCYTALIGGYCKLGRMDIAEATLLE 681
TY L+ G+C+ G + +A ++ ++M+ + + Y +I G C ++D A +
Sbjct: 456 VTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCS 515
Query: 682 MISFNIRPNKFTYTVMIDGYCKLGNMEEANKLLSKMKESGIVPDVVTYNTLSNGLYKGKD 741
+ ++P+ TY VMI G CK G++ EA+ L KMKE G PD TYN L G
Sbjct: 516 LSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSG 575
Query: 742 MDKAYKICDQMSTAGLSLDEITYTTLV 769
+ + ++ ++M G S D T ++
Sbjct: 576 LISSVELIEEMKVCGFSADSSTIKMVI 602
BLAST of Carg13153 vs. TAIR 10
Match:
AT5G65560.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 287.3 bits (734), Expect = 3.6e-77
Identity = 211/768 (27.47%), Postives = 359/768 (46.74%), Query Frame = 0
Query: 5 RFKINKTVPVLFPFSRRLACVLSTQPHKEHHQEPPWQLQDQLLYSVSSILSNSSLDSS-K 64
+F + TVP P +RR C +S +E + + + SILS + S
Sbjct: 26 KFSTDVTVP--SPVTRRQFCSVSPLLRNLPEEESD---SMSVPHRLLSILSKPNWHKSPS 85
Query: 65 CRALFPHLSPLEFDLMFFSVGLKANPKTCLNFFYFASDSFKFRFTIRSYCILILLLINSK 124
+++ +SP +F L +PKT LNF ++ S + +++ ++ SY L+ LLIN+
Sbjct: 86 LKSMVSAISPSHVSSLF---SLDLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNG 145
Query: 125 FLP---PARLLLIRLIDGKLPVLNFDLNKLHIEIANALLGLTSVVGRFEWTQAFDLLIHV 184
++ RLL+I+ D + +AL L + + + F+L
Sbjct: 146 YVGVVFKIRLLMIKSCD---------------SVGDALYVL-DLCRKMNKDERFELK--- 205
Query: 185 YSTQFMNLGFGCAVDAFYLFAQKGIFPSLKTCNFLLSSLVKANELEKCCEVFEVMSRGVR 244
L GC N LL+SL +
Sbjct: 206 -----YKLIIGC-------------------YNTLLNSLARF------------------ 265
Query: 245 PDVFLFTNNGRLDDAFKLKEKMIIEGVKPSLITYSVLINGLTKLEKFDEANHVLNEMVDT 304
G +D+ ++ +M+ + V P++ TY+ ++NG KL +EAN ++++V+
Sbjct: 266 ---------GLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEA 325
Query: 305 GFVPNAVVYNTLIDGYCKMGNINEALKIRDVMISKNITHTSVTLYSLMLGFCKSNQIERA 364
G P+ Y +LI GYC+ +++ A K+ + M K V L+ G C + +I+ A
Sbjct: 326 GLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEA 385
Query: 365 ENSLEEILSQGLSINRVTCYSVIHWLCTKSRFDSALRFTMVMLSKNFRPSDQLLTILVCG 424
+ ++ T +I LC R AL M +P+ T+L+
Sbjct: 386 MDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDS 445
Query: 425 LCKDGKHLDATELWFRLFEKGSPASTATSNALIHGLCGAGNLQEAVRILKEMLERGFPLD 484
LC K A EL ++ EKG + T NALI+G C G +++AV +++ M R +
Sbjct: 446 LCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPN 505
Query: 485 RITYNTLILGYCKAGKVEECFRLIDEMTKLGIEPDIYTCNLLLHGLCNAGNLDGAIKLWD 544
TYN LI GYCK+ V + ++++M + + PD+ T N L+ G C +GN D A +L
Sbjct: 506 TRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLS 565
Query: 545 EFKANGLVSNVYTYGVMMDGYCKANRMEDVEELFNEMVTKKMELSTIVYNILIRANCHSG 604
GLV + +TY M+D CK+ R+E+ +LF+ + K + + ++Y LI C +G
Sbjct: 566 LMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAG 625
Query: 605 NVVAALQVRDDMKSKGMFPTCSTYSSLIHGMCNVGRVEEAKQLIDEMRGEGLLTNVVCYT 664
V A + + M SK P T+++LIHG+C G+++EA L ++M GL V T
Sbjct: 626 KVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDT 685
Query: 665 ALIGGYCKLGRMDIAEATLLEMISFNIRPNKFTYTVMIDGYCKLGNMEEANKLLSKMKES 724
LI K G D A + +M+S +P+ TYT I YC+ G + +A +++KM+E+
Sbjct: 686 ILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMREN 714
Query: 725 GIVPDVVTYNTLSNGLYKGKDMDKAYKICDQMSTAGLSLDEITYTTLV 769
G+ PD+ TY++L G + A+ + +M G + T+ +L+
Sbjct: 746 GVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLI 714
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7031076.1 | 0.0e+00 | 100.00 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
KAG6600423.1 | 0.0e+00 | 94.40 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
XP_022942543.1 | 0.0e+00 | 93.43 | pentatricopeptide repeat-containing protein At4g19440, chloroplastic-like [Cucur... | [more] |
XP_023542002.1 | 0.0e+00 | 92.82 | pentatricopeptide repeat-containing protein At4g19440, chloroplastic-like [Cucur... | [more] |
XP_022979125.1 | 0.0e+00 | 91.36 | LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g19440, chlo... | [more] |
Match Name | E-value | Identity | Description | |
Q940A6 | 2.7e-194 | 46.38 | Pentatricopeptide repeat-containing protein At4g19440, chloroplastic OS=Arabidop... | [more] |
Q9FJE6 | 1.0e-76 | 30.57 | Putative pentatricopeptide repeat-containing protein At5g59900 OS=Arabidopsis th... | [more] |
Q6NQ83 | 3.0e-76 | 30.37 | Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidop... | [more] |
Q9LFC5 | 5.0e-76 | 29.09 | Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana OX... | [more] |
Q9LVQ5 | 5.0e-76 | 30.10 | Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1FWH7 | 0.0e+00 | 93.43 | pentatricopeptide repeat-containing protein At4g19440, chloroplastic-like OS=Cuc... | [more] |
A0A6J1ISC0 | 0.0e+00 | 91.36 | LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g19440, chlo... | [more] |
A0A6J1ETG9 | 0.0e+00 | 82.36 | pentatricopeptide repeat-containing protein At4g19440, chloroplastic-like OS=Cuc... | [more] |
A0A6J1C854 | 0.0e+00 | 81.91 | pentatricopeptide repeat-containing protein At4g19440, chloroplastic OS=Momordic... | [more] |
A0A6J1J2L6 | 0.0e+00 | 81.75 | pentatricopeptide repeat-containing protein At4g19440, chloroplastic-like OS=Cuc... | [more] |
Match Name | E-value | Identity | Description | |
AT4G19440.1 | 1.9e-195 | 46.38 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G19440.2 | 1.9e-195 | 46.38 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT5G59900.1 | 7.2e-78 | 30.57 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G22470.1 | 2.1e-77 | 30.37 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G65560.1 | 3.6e-77 | 27.47 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |