Carg13147 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg13147
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein MODIFYING WALL LIGNIN-2-like
Location	Carg_Chr04: 3166940 .. 3168006 (+)
RNA-Seq Expression	Carg13147
Synteny	Carg13147

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAAACGCCGTTTCGTCTACGCCTTAAGCCTCTCGATCGTCGTCTCTTTCGCACTCGTTGCCATTGTGTCGTGTATAGCTGCAGAATTACACAGAACAAAGGTATAGAATTCATCGCACAAGTGTGTGTTTGTTCATTAAGAACTTGGTTTTTGGCTAACTTTTCCCTCTTTTTTTTGTAGACCAAAGATCTCAGATTGGATGGGAAACTGTGTTATTTGCCAGAAAGTCAAGCATTTAGATATGGAGTTGCAGCATTGGCGTGTTTGGTTATTGCTCAAGTTATTGGAAATGTCTTGTTCTGCACAAGTTGCAGTTTGAACTCAAGAGGGAAGAAAAGCAATGATCAACAACCTCCTAGAAGATCAAATTTGGCCATAATTCTTCTTGTTATTTCTTGGTAGGTTTGGTTCATTTCTCTTGTTTTAACTGTTTGATCAGCCTTCCAAAAGTCATTCAAATCACCAATCAATAGTCATAAATCTTCAATTTCAAGAACTCATCATCTAGTCTCATTCATGTTTATGTTCAATTTCTTGAGAATTTGCTAATAATTCATTCTTCTGATTCAGAATCTTCAAAGAAATTTGTAAGAATTTGCTAATAGTTGATTATTCATGAAACGGAAAAATCAATTCAAATCGAAAATGTAATTCAAGAGGAGATTTGATGTTCTAGGGCAAGCTTTACCGTGGTGATATTGCTACTGAGCGCGGCGACGAGTATGAGTAGACAGCAACAATACGGTGCGGGCTGGTTGAGCGGCGAGTGCTATTTGGTGAAGAGCGGCGTATACATCGCCGCAGCAATTCTGATCCTCGTTTCGACATGTTCAATCGTCTGCTCCGCCGTAGCAGTCTTGAGGAAGAGCCTTCAGATCGACGAATCCAGAAAAACTAGTACACTTCCAAAATAAAAAAAAAGGAAATAAAAGCGTCGCAACGGGAACGGCAACGGCGGCGATTGGAAGAAGGCGGCGAAGCGCCATTGACGAGAGCTCCACGGATGCCATGTGTCCTGTGGATGGCGCCTTCACTGGAACGGTCTCTTGGATCTCCAGCTAA

mRNA sequence

ATGGAAAAACGCCGTTTCGTCTACGCCTTAAGCCTCTCGATCGTCGTCTCTTTCGCACTCGTTGCCATTGTGTCGTGTATAGCTGCAGAATTACACAGAACAAAGACCAAAGATCTCAGATTGGATGGGAAACTGTGTTATTTGCCAGAAAGTCAAGCATTTAGATATGGAGTTGCAGCATTGGCGTGTTTGGTTATTGCTCAAGTTATTGGAAATGTCTTGTTCTGCACAAGTTGCAGTTTGAACTCAAGAGGGAAGAAAAGCAATGATCAACAACCTCCTAGAAGATCAAATTTGGCCATAATTCTTCTTGTTATTTCTTGGGCAAGCTTTACCGTGGTGATATTGCTACTGAGCGCGGCGACGAGTATGAGTAGACAGCAACAATACGGTGCGGGCTGGTTGAGCGGCGAGTGCTATTTGGTGAAGAGCGGCGTATACATCGCCGCAGCAATTCTGATCCTCGTTTCGACATGTTCAATCGTCTGCTCCGCCGTAGCAGTCTTGAGGAAGAGCCTTCAGATCGACGAATCCAGAAAAACTAGAAATAAAAGCGTCGCAACGGGAACGGCAACGGCGGCGATTGGAAGAAGGCGGCGAAGCGCCATTGACGAGAGCTCCACGGATGCCATGTGTCCTGTGGATGGCGCCTTCACTGGAACGGTCTCTTGGATCTCCAGCTAA

Coding sequence (CDS)

ATGGAAAAACGCCGTTTCGTCTACGCCTTAAGCCTCTCGATCGTCGTCTCTTTCGCACTCGTTGCCATTGTGTCGTGTATAGCTGCAGAATTACACAGAACAAAGACCAAAGATCTCAGATTGGATGGGAAACTGTGTTATTTGCCAGAAAGTCAAGCATTTAGATATGGAGTTGCAGCATTGGCGTGTTTGGTTATTGCTCAAGTTATTGGAAATGTCTTGTTCTGCACAAGTTGCAGTTTGAACTCAAGAGGGAAGAAAAGCAATGATCAACAACCTCCTAGAAGATCAAATTTGGCCATAATTCTTCTTGTTATTTCTTGGGCAAGCTTTACCGTGGTGATATTGCTACTGAGCGCGGCGACGAGTATGAGTAGACAGCAACAATACGGTGCGGGCTGGTTGAGCGGCGAGTGCTATTTGGTGAAGAGCGGCGTATACATCGCCGCAGCAATTCTGATCCTCGTTTCGACATGTTCAATCGTCTGCTCCGCCGTAGCAGTCTTGAGGAAGAGCCTTCAGATCGACGAATCCAGAAAAACTAGAAATAAAAGCGTCGCAACGGGAACGGCAACGGCGGCGATTGGAAGAAGGCGGCGAAGCGCCATTGACGAGAGCTCCACGGATGCCATGTGTCCTGTGGATGGCGCCTTCACTGGAACGGTCTCTTGGATCTCCAGCTAA

Protein sequence

MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAALACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQPPRRSNLAIILLVISWASFTVVILLLSAATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRKTRNKSVATGTATAAIGRRRRSAIDESSTDAMCPVDGAFTGTVSWISS

Homology

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BLAST of Carg13147 vs. NCBI nr
Match: KAG7031081.1 (hypothetical protein SDJN02_05120, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 422.2 bits (1084), Expect = 2.9e-114
Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0


Query: 1   MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA 60
           MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA
Sbjct: 1   MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA 60

Query: 61  LACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQPPRRSNLAIILLVISWASFTVVILLLSA 120
           LACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQPPRRSNLAIILLVISWASFTVVILLLSA
Sbjct: 61  LACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQPPRRSNLAIILLVISWASFTVVILLLSA 120

Query: 121 ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRK 180
           ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRK
Sbjct: 121 ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRK 180

Query: 181 TRNKSVATGTATAAIGRRRRSAIDESSTDAMCPVDGAFTGTVSWISS 228
           TRNKSVATGTATAAIGRRRRSAIDESSTDAMCPVDGAFTGTVSWISS
Sbjct: 181 TRNKSVATGTATAAIGRRRRSAIDESSTDAMCPVDGAFTGTVSWISS 227

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BLAST of Carg13147 vs. NCBI nr
Match: KAG6600430.1 (Protein MODIFYING WALL LIGNIN-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 337.4 bits (864), Expect = 9.4e-89
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA 60
           MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA
Sbjct: 1   MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA 60

Query: 61  LACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQPPRRSNLAIILLVISWASFTVVILLLSA 120
           LACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQPPRRSNLAIILLVISWASFTVVILLLSA
Sbjct: 61  LACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQPPRRSNLAIILLVISWASFTVVILLLSA 120

Query: 121 ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRK 180
           ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRK
Sbjct: 121 ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRK 180

Query: 181 T 182
           T
Sbjct: 181 T 181

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BLAST of Carg13147 vs. NCBI nr
Match: XP_023543619.1 (uncharacterized protein LOC111803449 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 334.0 bits (855), Expect = 1.0e-87
Identity = 180/181 (99.45%), Postives = 180/181 (99.45%), Query Frame = 0


Query: 1   MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA 60
           MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA
Sbjct: 1   MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA 60

Query: 61  LACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQPPRRSNLAIILLVISWASFTVVILLLSA 120
           LACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQPPRRS LAIILLVISWASFTVVILLLSA
Sbjct: 61  LACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQPPRRSILAIILLVISWASFTVVILLLSA 120

Query: 121 ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRK 180
           ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRK
Sbjct: 121 ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRK 180

Query: 181 T 182
           T
Sbjct: 181 T 181

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BLAST of Carg13147 vs. NCBI nr
Match: XP_022941598.1 (uncharacterized protein LOC111446907 [Cucurbita moschata])

HSP 1 Score: 330.5 bits (846), Expect = 1.2e-86
Identity = 179/181 (98.90%), Postives = 179/181 (98.90%), Query Frame = 0


Query: 1   MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA 60
           MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA
Sbjct: 1   MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA 60

Query: 61  LACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQPPRRSNLAIILLVISWASFTVVILLLSA 120
           LACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQ PRRS LAIILLVISWASFTVVILLLSA
Sbjct: 61  LACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQRPRRSILAIILLVISWASFTVVILLLSA 120

Query: 121 ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRK 180
           ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRK
Sbjct: 121 ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRK 180

Query: 181 T 182
           T
Sbjct: 181 T 181

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BLAST of Carg13147 vs. NCBI nr
Match: XP_022982923.1 (uncharacterized protein LOC111481621 [Cucurbita maxima])

HSP 1 Score: 325.5 bits (833), Expect = 3.7e-85
Identity = 176/181 (97.24%), Postives = 178/181 (98.34%), Query Frame = 0


Query: 1   MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA 60
           MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA
Sbjct: 1   MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA 60

Query: 61  LACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQPPRRSNLAIILLVISWASFTVVILLLSA 120
           LAC VIAQVIGNVLFCT+CSLNSRGKK+NDQQPPRRS LAIILLVISWASFTVVILLLSA
Sbjct: 61  LACFVIAQVIGNVLFCTNCSLNSRGKKNNDQQPPRRSILAIILLVISWASFTVVILLLSA 120

Query: 121 ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRK 180
           ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVST SIVCSAVAVLRKSLQIDESRK
Sbjct: 121 ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTGSIVCSAVAVLRKSLQIDESRK 180

Query: 181 T 182
           T
Sbjct: 181 T 181

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BLAST of Carg13147 vs. ExPASy Swiss-Prot
Match: A2RVU1 (Protein MODIFYING WALL LIGNIN-1 OS=Arabidopsis thaliana OX=3702 GN=MWL1 PE=1 SV=2)

HSP 1 Score: 120.6 bits (301), Expect = 2.4e-26
Identity = 69/179 (38.55%), Postives = 104/179 (58.10%), Query Frame = 0


Query: 18  FALVAIVSCIAAELHRTKT----------KDLRLDGKLCYLPESQAFRYGVAALACLVIA 77
           F L A   C++AE  + K           KDL+ DG+ CYLPE++AF  G+AAL C+ +A
Sbjct: 6   FGLAAFFLCLSAEFQKAKALLRAQVFLKGKDLKWDGESCYLPENRAFGLGIAALVCVSVA 65

Query: 78  QVIGNVLFCTSCSLNSRGKKSNDQQPPRRSNLAIILLVISWASFTVVILLLSAATSMSRQ 137
           Q++GNV+ C       RG    D+   R +   IILL+ SW +F V + L+S   SM+R+
Sbjct: 66  QIVGNVVIC-------RGFTKTDK--TRTTIFCIILLLFSWVNFAVAVTLISVGASMNRE 125

Query: 138 QQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRKTRNKSV 187
           Q YG GWL+ ECYLVK GV+ A+  L + +  +I+ +    ++ SLQ++   K   ++V
Sbjct: 126 QIYGKGWLNRECYLVKDGVFAASGFLSVTTMAAILGAFAFKVKPSLQVENHDKRHTQNV 175

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BLAST of Carg13147 vs. ExPASy Swiss-Prot
Match: O65708 (Protein MODIFYING WALL LIGNIN-2 OS=Arabidopsis thaliana OX=3702 GN=MWL2 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 3.8e-24
Identity = 65/163 (39.88%), Postives = 97/163 (59.51%), Query Frame = 0


Query: 13  SIVVSFALVAIVSCIAAELHRTKTKDLRLD-GKLCYLPESQAFRYGVAALACLVIAQVIG 72
           S+V S  LV+ ++C AAE  RT+ +D+R D  + CY+P S AF  G AA+ C  +AQ++G
Sbjct: 8   SVVFSLGLVSFITCFAAEFKRTQKEDIRWDTERNCYVPGSHAFGLGSAAVLCFCLAQIVG 67

Query: 73  NVLFCTSCSLNSRGKKSNDQQPPRRSNLAIILLVISWASFTVVILLLSAATSMSRQQQYG 132
           N++   +   +    K  D        L  +LL++SW++F VV+L+LS A SMSR Q YG
Sbjct: 68  NIVVFRN---HRTRTKREDGYKITDLTLPTVLLLLSWSNFVVVVLILSTAISMSRAQAYG 127

Query: 133 AGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQ 175
            GWL  +CYLVK GV+ A+  L ++   ++  SA  +  K  Q
Sbjct: 128 EGWLDEDCYLVKDGVFAASGCLAILGLGALTISATRIKVKKQQ 167

[Close]

BLAST of Carg13147 vs. ExPASy TrEMBL
Match: A0A6J1FSJ4 (uncharacterized protein LOC111446907 OS=Cucurbita moschata OX=3662 GN=LOC111446907 PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 5.6e-87
Identity = 179/181 (98.90%), Postives = 179/181 (98.90%), Query Frame = 0


Query: 1   MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA 60
           MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA
Sbjct: 1   MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA 60

Query: 61  LACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQPPRRSNLAIILLVISWASFTVVILLLSA 120
           LACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQ PRRS LAIILLVISWASFTVVILLLSA
Sbjct: 61  LACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQRPRRSILAIILLVISWASFTVVILLLSA 120

Query: 121 ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRK 180
           ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRK
Sbjct: 121 ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRK 180

Query: 181 T 182
           T
Sbjct: 181 T 181

[Close]

BLAST of Carg13147 vs. ExPASy TrEMBL
Match: A0A6J1J6B1 (uncharacterized protein LOC111481621 OS=Cucurbita maxima OX=3661 GN=LOC111481621 PE=4 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 1.8e-85
Identity = 176/181 (97.24%), Postives = 178/181 (98.34%), Query Frame = 0


Query: 1   MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA 60
           MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA
Sbjct: 1   MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA 60

Query: 61  LACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQPPRRSNLAIILLVISWASFTVVILLLSA 120
           LAC VIAQVIGNVLFCT+CSLNSRGKK+NDQQPPRRS LAIILLVISWASFTVVILLLSA
Sbjct: 61  LACFVIAQVIGNVLFCTNCSLNSRGKKNNDQQPPRRSILAIILLVISWASFTVVILLLSA 120

Query: 121 ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRK 180
           ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVST SIVCSAVAVLRKSLQIDESRK
Sbjct: 121 ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTGSIVCSAVAVLRKSLQIDESRK 180

Query: 181 T 182
           T
Sbjct: 181 T 181

[Close]

BLAST of Carg13147 vs. ExPASy TrEMBL
Match: A0A0A0KYL9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G056580 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 2.5e-63
Identity = 137/181 (75.69%), Postives = 152/181 (83.98%), Query Frame = 0


Query: 1   MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA 60
           M K RF YALSLSIVVS AL+A VSC+AAELHRTKTKDL+LDGKLCYLPESQAF YGVAA
Sbjct: 1   MGKHRFGYALSLSIVVSLALIAFVSCVAAELHRTKTKDLKLDGKLCYLPESQAFGYGVAA 60

Query: 61  LACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQPPRRSNLAIILLVISWASFTVVILLLSA 120
           LACLV+AQVIGN+L CTSCS+NSR KK   +QPP+R NLA   LV+SWASFTVVILLLS 
Sbjct: 61  LACLVMAQVIGNILLCTSCSINSREKK-RSEQPPKRPNLATFFLVVSWASFTVVILLLST 120

Query: 121 ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRK 180
           A+SMSRQQ Y  GWL GECYLVKSGVY+AAAILIL+S CS V SAV V     +I+ESRK
Sbjct: 121 ASSMSRQQPYATGWLGGECYLVKSGVYVAAAILILISICSTVGSAVTV-----RINESRK 175

Query: 181 T 182
           +
Sbjct: 181 S 175

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BLAST of Carg13147 vs. ExPASy TrEMBL
Match: A0A5A7T9R1 (DUF1218 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold118G00180 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.8e-61
Identity = 134/181 (74.03%), Postives = 151/181 (83.43%), Query Frame = 0


Query: 1   MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA 60
           M K  F YALSLSIVVS AL+A VSC+AAELHRTKTKDL+LDGKLCYLPESQAF YGVAA
Sbjct: 1   MGKHCFGYALSLSIVVSLALIAFVSCVAAELHRTKTKDLKLDGKLCYLPESQAFGYGVAA 60

Query: 61  LACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQPPRRSNLAIILLVISWASFTVVILLLSA 120
           LACLV+AQVIGN+L CTSCS+NSR KK   +QPP+R NLA   LV+SWASFTVVILLL A
Sbjct: 61  LACLVMAQVIGNILLCTSCSINSREKK-RSEQPPKRPNLATFFLVVSWASFTVVILLLIA 120

Query: 121 ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRK 180
           A+SMSRQQ Y  GWL GECYLVKSGVY+AAAILIL+S C+ V SAV V     +++ESRK
Sbjct: 121 ASSMSRQQPYATGWLGGECYLVKSGVYVAAAILILISICTTVGSAVTV-----RMNESRK 175

Query: 181 T 182
           +
Sbjct: 181 S 175

[Close]

BLAST of Carg13147 vs. ExPASy TrEMBL
Match: A0A1S3BTM2 (uncharacterized protein LOC103493027 OS=Cucumis melo OX=3656 GN=LOC103493027 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.8e-61
Identity = 134/181 (74.03%), Postives = 151/181 (83.43%), Query Frame = 0


Query: 1   MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA 60
           M K  F YALSLSIVVS AL+A VSC+AAELHRTKTKDL+LDGKLCYLPESQAF YGVAA
Sbjct: 1   MGKHCFGYALSLSIVVSLALIAFVSCVAAELHRTKTKDLKLDGKLCYLPESQAFGYGVAA 60

Query: 61  LACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQPPRRSNLAIILLVISWASFTVVILLLSA 120
           LACLV+AQVIGN+L CTSCS+NSR KK   +QPP+R NLA   LV+SWASFTVVILLL A
Sbjct: 61  LACLVMAQVIGNILLCTSCSINSREKK-RSEQPPKRPNLATFFLVVSWASFTVVILLLIA 120

Query: 121 ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRK 180
           A+SMSRQQ Y  GWL GECYLVKSGVY+AAAILIL+S C+ V SAV V     +++ESRK
Sbjct: 121 ASSMSRQQPYATGWLGGECYLVKSGVYVAAAILILISICTTVGSAVTV-----RMNESRK 175

Query: 181 T 182
           +
Sbjct: 181 S 175

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BLAST of Carg13147 vs. TAIR 10
Match: AT1G31720.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 119.4 bits (298), Expect = 3.8e-27
Identity = 70/187 (37.43%), Postives = 106/187 (56.68%), Query Frame = 0


Query: 10  LSLSIVVSFALVAIVSCIAAELHRTKT----------KDLRLDGKLCYLPESQAFRYGVA 69
           L    +  F L A   C++AE  + K           KDL+ DG+ CYLPE++AF  G+A
Sbjct: 17  LFFMFIFLFGLAAFFLCLSAEFQKAKALLRAQVFLKGKDLKWDGESCYLPENRAFGLGIA 76

Query: 70  ALACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQPPRRSNLAIILLVISWASFTVVILLLS 129
           AL C+ +AQ++GNV+ C       RG    D+   R +   IILL+ SW +F V + L+S
Sbjct: 77  ALVCVSVAQIVGNVVIC-------RGFTKTDK--TRTTIFCIILLLFSWVNFAVAVTLIS 136

Query: 130 AATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESR 187
              SM+R+Q YG GWL+ ECYLVK GV+ A+  L + +  +I+ +    ++ SLQ++   
Sbjct: 137 VGASMNREQIYGKGWLNRECYLVKDGVFAASGFLSVTTMAAILGAFAFKVKPSLQVENHD 194

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BLAST of Carg13147 vs. TAIR 10
Match: AT4G19370.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 113.2 bits (282), Expect = 2.7e-25
Identity = 65/163 (39.88%), Postives = 97/163 (59.51%), Query Frame = 0


Query: 13  SIVVSFALVAIVSCIAAELHRTKTKDLRLD-GKLCYLPESQAFRYGVAALACLVIAQVIG 72
           S+V S  LV+ ++C AAE  RT+ +D+R D  + CY+P S AF  G AA+ C  +AQ++G
Sbjct: 8   SVVFSLGLVSFITCFAAEFKRTQKEDIRWDTERNCYVPGSHAFGLGSAAVLCFCLAQIVG 67

Query: 73  NVLFCTSCSLNSRGKKSNDQQPPRRSNLAIILLVISWASFTVVILLLSAATSMSRQQQYG 132
           N++   +   +    K  D        L  +LL++SW++F VV+L+LS A SMSR Q YG
Sbjct: 68  NIVVFRN---HRTRTKREDGYKITDLTLPTVLLLLSWSNFVVVVLILSTAISMSRAQAYG 127

Query: 133 AGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQ 175
            GWL  +CYLVK GV+ A+  L ++   ++  SA  +  K  Q
Sbjct: 128 EGWLDEDCYLVKDGVFAASGCLAILGLGALTISATRIKVKKQQ 167

The following BLAST results are available for this feature:

BLAST of Carg13147 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7031081.1	2.9e-114	100.00	hypothetical protein SDJN02_05120, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6600430.1	9.4e-89	100.00	Protein MODIFYING WALL LIGNIN-1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023543619.1	1.0e-87	99.45	uncharacterized protein LOC111803449 [Cucurbita pepo subsp. pepo]	[more]
XP_022941598.1	1.2e-86	98.90	uncharacterized protein LOC111446907 [Cucurbita moschata]	[more]
XP_022982923.1	3.7e-85	97.24	uncharacterized protein LOC111481621 [Cucurbita maxima]	[more]

BLAST of Carg13147 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A2RVU1	2.4e-26	38.55	Protein MODIFYING WALL LIGNIN-1 OS=Arabidopsis thaliana OX=3702 GN=MWL1 PE=1 SV=...	[more]
O65708	3.8e-24	39.88	Protein MODIFYING WALL LIGNIN-2 OS=Arabidopsis thaliana OX=3702 GN=MWL2 PE=2 SV=...	[more]

BLAST of Carg13147 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FSJ4	5.6e-87	98.90	uncharacterized protein LOC111446907 OS=Cucurbita moschata OX=3662 GN=LOC1114469...	[more]
A0A6J1J6B1	1.8e-85	97.24	uncharacterized protein LOC111481621 OS=Cucurbita maxima OX=3661 GN=LOC111481621...	[more]
A0A0A0KYL9	2.5e-63	75.69	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G056580 PE=4 SV=1	[more]
A0A5A7T9R1	1.8e-61	74.03	DUF1218 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A1S3BTM2	1.8e-61	74.03	uncharacterized protein LOC103493027 OS=Cucumis melo OX=3656 GN=LOC103493027 PE=...	[more]

BLAST of Carg13147 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G31720.1	3.8e-27	37.43	Protein of unknown function (DUF1218)	[more]
AT4G19370.1	2.7e-25	39.88	Protein of unknown function (DUF1218)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009606	Modifying wall lignin-1/2	PFAM	PF06749	DUF1218	coord: 60..158 e-value: 1.9E-16 score: 60.3
None	No IPR available	PANTHER	PTHR31769:SF6	PROTEIN MODIFYING WALL LIGNIN-1	coord: 2..197
None	No IPR available	PANTHER	PTHR31769	OS07G0462200 PROTEIN-RELATED	coord: 2..197
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..26 score: 7.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg13147-RA	Carg13147-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane