Homology
BLAST of Carg13121 vs. NCBI nr
Match:
KAG7031106.1 (DExH-box ATP-dependent RNA helicase DExH6 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 2520.3 bits (6531), Expect = 0.0e+00
Identity = 1286/1286 (100.00%), Postives = 1286/1286 (100.00%), Query Frame = 0
Query: 1 MAKKKQKKGEQKPKPKAFADADSEITQALERFCLSNDEVFTFEADLSKRERALVHEECRK 60
MAKKKQKKGEQKPKPKAFADADSEITQALERFCLSNDEVFTFEADLSKRERALVHEECRK
Sbjct: 1 MAKKKQKKGEQKPKPKAFADADSEITQALERFCLSNDEVFTFEADLSKRERALVHEECRK 60
Query: 61 MGLTSKSYGRGDQRRVSIYKSKPQKDTMKFSEKTKSVLDDLFSSYPPDDGELGRETIGKC 120
MGLTSKSYGRGDQRRVSIYKSKPQKDTMKFSEKTKSVLDDLFSSYPPDDGELGRETIGKC
Sbjct: 61 MGLTSKSYGRGDQRRVSIYKSKPQKDTMKFSEKTKSVLDDLFSSYPPDDGELGRETIGKC 120
Query: 121 KKKTHKQSRKKDDIFWRPLMNKEEIMKKVESYTTRVKSVANLKKISGDRSKLPIASFQDV 180
KKKTHKQSRKKDDIFWRPLMNKEEIMKKVESYTTRVKSVANLKKISGDRSKLPIASFQDV
Sbjct: 121 KKKTHKQSRKKDDIFWRPLMNKEEIMKKVESYTTRVKSVANLKKISGDRSKLPIASFQDV 180
Query: 181 ITSTVESHQVVLISGETGCGKTTQVPQFLLDYMWGKGEACKIICTQPRRISATSVSERIS 240
ITSTVESHQVVLISGETGCGKTTQVPQFLLDYMWGKGEACKIICTQPRRISATSVSERIS
Sbjct: 181 ITSTVESHQVVLISGETGCGKTTQVPQFLLDYMWGKGEACKIICTQPRRISATSVSERIS 240
Query: 241 YERGENVGSDVGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLTTEASEKSRKNVV 300
YERGENVGSDVGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLTTEASEKSRKNVV
Sbjct: 241 YERGENVGSDVGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLTTEASEKSRKNVV 300
Query: 301 SDLTHIIVDEVHERDRYSDFILAILRDLLPTYPHLRLILMSATIDAERFSKYFGGCPIIS 360
SDLTHIIVDEVHERDRYSDFILAILRDLLPTYPHLRLILMSATIDAERFSKYFGGCPIIS
Sbjct: 301 SDLTHIIVDEVHERDRYSDFILAILRDLLPTYPHLRLILMSATIDAERFSKYFGGCPIIS 360
Query: 361 VPGFTFPVKNFYLEDVLSIVKSSEENHLDDSTVGASDEETELTEEDKLSLDEAIQLAWLN 420
VPGFTFPVKNFYLEDVLSIVKSSEENHLDDSTVGASDEETELTEEDKLSLDEAIQLAWLN
Sbjct: 361 VPGFTFPVKNFYLEDVLSIVKSSEENHLDDSTVGASDEETELTEEDKLSLDEAIQLAWLN 420
Query: 421 DEFDPLLELVASEGSSQIFNYQHSVTGLSPLMVLAGKGRVSDVCMLLSFGAMCELQAKDG 480
DEFDPLLELVASEGSSQIFNYQHSVTGLSPLMVLAGKGRVSDVCMLLSFGAMCELQAKDG
Sbjct: 421 DEFDPLLELVASEGSSQIFNYQHSVTGLSPLMVLAGKGRVSDVCMLLSFGAMCELQAKDG 480
Query: 481 MTALEMAERGEHKETAEAIRKHLESSMSNSKEEQRLIGKYLARNSNSVDVALIDLLLGKI 540
MTALEMAERGEHKETAEAIRKHLESSMSNSKEEQRLIGKYLARNSNSVDVALIDLLLGKI
Sbjct: 481 MTALEMAERGEHKETAEAIRKHLESSMSNSKEEQRLIGKYLARNSNSVDVALIDLLLGKI 540
Query: 541 CLDSKEGAILVFLPGWDDISKTRERLSINPIFKDASKFLIISLHSMVPSKEQKKVFKRPP 600
CLDSKEGAILVFLPGWDDISKTRERLSINPIFKDASKFLIISLHSMVPSKEQKKVFKRPP
Sbjct: 541 CLDSKEGAILVFLPGWDDISKTRERLSINPIFKDASKFLIISLHSMVPSKEQKKVFKRPP 600
Query: 601 PGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVSTFQSSWISKASAKQREG 660
PGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVSTFQSSWISKASAKQREG
Sbjct: 601 PGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVSTFQSSWISKASAKQREG 660
Query: 661 RAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDPNCRIEDFLQKTLD 720
RAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDPNCRIEDFLQKTLD
Sbjct: 661 RAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDPNCRIEDFLQKTLD 720
Query: 721 PPVFDTIRNAILVLQDIGALSLDEKLTELGEKLGSLPVHPVTSKMLIFAILMNCLEPALT 780
PPVFDTIRNAILVLQDIGALSLDEKLTELGEKLGSLPVHPVTSKMLIFAILMNCLEPALT
Sbjct: 721 PPVFDTIRNAILVLQDIGALSLDEKLTELGEKLGSLPVHPVTSKMLIFAILMNCLEPALT 780
Query: 781 LACASDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKNAKRRGQEA 840
LACASDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKNAKRRGQEA
Sbjct: 781 LACASDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKNAKRRGQEA 840
Query: 841 RFCSKYHISPSTMSMLFGMRRQLEMELVQNGFIPEDISTCSLNARDPGILHAVLVAGLYP 900
RFCSKYHISPSTMSMLFGMRRQLEMELVQNGFIPEDISTCSLNARDPGILHAVLVAGLYP
Sbjct: 841 RFCSKYHISPSTMSMLFGMRRQLEMELVQNGFIPEDISTCSLNARDPGILHAVLVAGLYP 900
Query: 901 MVGRLLPPQKKGKRAVVETGSGGRVLLHRQSLNFELSHKLTDNCPLIVYDEITRGDGGTH 960
MVGRLLPPQKKGKRAVVETGSGGRVLLHRQSLNFELSHKLTDNCPLIVYDEITRGDGGTH
Sbjct: 901 MVGRLLPPQKKGKRAVVETGSGGRVLLHRQSLNFELSHKLTDNCPLIVYDEITRGDGGTH 960
Query: 961 IRNCTVVGPLPLLMVAKEIAVAPAKENDNGKGDIVNDTYGNDEAGVVETVEDKMDIENKS 1020
IRNCTVVGPLPLLMVAKEIAVAPAKENDNGKGDIVNDTYGNDEAGVVETVEDKMDIENKS
Sbjct: 961 IRNCTVVGPLPLLMVAKEIAVAPAKENDNGKGDIVNDTYGNDEAGVVETVEDKMDIENKS 1020
Query: 1021 NEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVKHPNKILPP 1080
NEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVKHPNKILPP
Sbjct: 1021 NEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVKHPNKILPP 1080
Query: 1081 VLGASMHALACILSYDGLTGISLESVEMLTTMVDATEISNFVPGRSNETHKKVSSFHRSL 1140
VLGASMHALACILSYDGLTGISLESVEMLTTMVDATEISNFVPGRSNETHKKVSSFHRSL
Sbjct: 1081 VLGASMHALACILSYDGLTGISLESVEMLTTMVDATEISNFVPGRSNETHKKVSSFHRSL 1140
Query: 1141 SNYNDFTVPESSGTSNLNHPFSQNFLPPPDFRAANPSDPSSPNFRAFPNSVYARSTLQPH 1200
SNYNDFTVPESSGTSNLNHPFSQNFLPPPDFRAANPSDPSSPNFRAFPNSVYARSTLQPH
Sbjct: 1141 SNYNDFTVPESSGTSNLNHPFSQNFLPPPDFRAANPSDPSSPNFRAFPNSVYARSTLQPH 1200
Query: 1201 REQEHPQPAKPFQDQNATQQQHAPEHKTRKQRKSRRERKAAQQQKHPQLQKPPSGEPSLN 1260
REQEHPQPAKPFQDQNATQQQHAPEHKTRKQRKSRRERKAAQQQKHPQLQKPPSGEPSLN
Sbjct: 1201 REQEHPQPAKPFQDQNATQQQHAPEHKTRKQRKSRRERKAAQQQKHPQLQKPPSGEPSLN 1260
Query: 1261 GYGLSTYGPYGLRGISLKRPRGNGAG 1287
GYGLSTYGPYGLRGISLKRPRGNGAG
Sbjct: 1261 GYGLSTYGPYGLRGISLKRPRGNGAG 1286
BLAST of Carg13121 vs. NCBI nr
Match:
KAG6600457.1 (DExH-box ATP-dependent RNA helicase DExH6, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 2507.2 bits (6497), Expect = 0.0e+00
Identity = 1279/1281 (99.84%), Postives = 1280/1281 (99.92%), Query Frame = 0
Query: 1 MAKKKQKKGEQKPKPKAFADADSEITQALERFCLSNDEVFTFEADLSKRERALVHEECRK 60
MAKKKQKKGEQKPKPKAFADADSEITQALERFCLSNDEVFTFEADLSKRERALVHEECRK
Sbjct: 1 MAKKKQKKGEQKPKPKAFADADSEITQALERFCLSNDEVFTFEADLSKRERALVHEECRK 60
Query: 61 MGLTSKSYGRGDQRRVSIYKSKPQKDTMKFSEKTKSVLDDLFSSYPPDDGELGRETIGKC 120
MGLTSKSYGRGDQRRVSIYKSKPQKDTMKFSEKTKSVLDDLFSSYPPDDGELGRETIGKC
Sbjct: 61 MGLTSKSYGRGDQRRVSIYKSKPQKDTMKFSEKTKSVLDDLFSSYPPDDGELGRETIGKC 120
Query: 121 KKKTHKQSRKKDDIFWRPLMNKEEIMKKVESYTTRVKSVANLKKISGDRSKLPIASFQDV 180
KKKTHKQSRKKDDIFWRP MNKEEIMKKVESYTTRVKSVANLKKISGDRSKLPIASFQDV
Sbjct: 121 KKKTHKQSRKKDDIFWRPSMNKEEIMKKVESYTTRVKSVANLKKISGDRSKLPIASFQDV 180
Query: 181 ITSTVESHQVVLISGETGCGKTTQVPQFLLDYMWGKGEACKIICTQPRRISATSVSERIS 240
ITSTVESHQVVLISGETGCGKTTQVPQFLLDYMWGKGEACKIICTQPRRISATSVSERIS
Sbjct: 181 ITSTVESHQVVLISGETGCGKTTQVPQFLLDYMWGKGEACKIICTQPRRISATSVSERIS 240
Query: 241 YERGENVGSDVGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLTTEASEKSRKNVV 300
YERGENVGSDVGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLTTEASEKSRKNVV
Sbjct: 241 YERGENVGSDVGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLTTEASEKSRKNVV 300
Query: 301 SDLTHIIVDEVHERDRYSDFILAILRDLLPTYPHLRLILMSATIDAERFSKYFGGCPIIS 360
SDLTHIIVDEVHERDRYSDFILAILRDLLPTYPHLRLILMSATIDAERFSKYFGGCPIIS
Sbjct: 301 SDLTHIIVDEVHERDRYSDFILAILRDLLPTYPHLRLILMSATIDAERFSKYFGGCPIIS 360
Query: 361 VPGFTFPVKNFYLEDVLSIVKSSEENHLDDSTVGASDEETELTEEDKLSLDEAIQLAWLN 420
VPGFTFPVKNFYLEDVLSIVKSSEENHLDDSTVGASDEETELTEEDKLSLDEAIQLAWLN
Sbjct: 361 VPGFTFPVKNFYLEDVLSIVKSSEENHLDDSTVGASDEETELTEEDKLSLDEAIQLAWLN 420
Query: 421 DEFDPLLELVASEGSSQIFNYQHSVTGLSPLMVLAGKGRVSDVCMLLSFGAMCELQAKDG 480
DEFDPLLELVASEGSSQIFNYQHSVTGLSPLMVLAGKGRVSDVCMLLSFGAMCELQAKDG
Sbjct: 421 DEFDPLLELVASEGSSQIFNYQHSVTGLSPLMVLAGKGRVSDVCMLLSFGAMCELQAKDG 480
Query: 481 MTALEMAERGEHKETAEAIRKHLESSMSNSKEEQRLIGKYLARNSNSVDVALIDLLLGKI 540
MTALEMAERGEHKETAEAIRKHLESSMSNSKEEQ+LIGKYLARNSNSVDVALIDLLLGKI
Sbjct: 481 MTALEMAERGEHKETAEAIRKHLESSMSNSKEEQQLIGKYLARNSNSVDVALIDLLLGKI 540
Query: 541 CLDSKEGAILVFLPGWDDISKTRERLSINPIFKDASKFLIISLHSMVPSKEQKKVFKRPP 600
CLDSKEGAILVFLPGWDDISKTRERLSINPIFKDASKFLIISLHSMVPSKEQKKVFKRPP
Sbjct: 541 CLDSKEGAILVFLPGWDDISKTRERLSINPIFKDASKFLIISLHSMVPSKEQKKVFKRPP 600
Query: 601 PGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVSTFQSSWISKASAKQREG 660
PGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVSTFQSSWISKASAKQREG
Sbjct: 601 PGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVSTFQSSWISKASAKQREG 660
Query: 661 RAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDPNCRIEDFLQKTLD 720
RAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDPNCRIEDFLQKTLD
Sbjct: 661 RAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDPNCRIEDFLQKTLD 720
Query: 721 PPVFDTIRNAILVLQDIGALSLDEKLTELGEKLGSLPVHPVTSKMLIFAILMNCLEPALT 780
PPVFDTIRNAILVLQDIGALSLDEKLTELGEKLGSLPVHPVTSKMLIFAILMNCLEPALT
Sbjct: 721 PPVFDTIRNAILVLQDIGALSLDEKLTELGEKLGSLPVHPVTSKMLIFAILMNCLEPALT 780
Query: 781 LACASDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKNAKRRGQEA 840
LACASDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKNAKRRGQEA
Sbjct: 781 LACASDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKNAKRRGQEA 840
Query: 841 RFCSKYHISPSTMSMLFGMRRQLEMELVQNGFIPEDISTCSLNARDPGILHAVLVAGLYP 900
RFCSKYHISPSTMSMLFGMRRQLEMELVQNGFIPEDISTCSLNARDPGILHAVLVAGLYP
Sbjct: 841 RFCSKYHISPSTMSMLFGMRRQLEMELVQNGFIPEDISTCSLNARDPGILHAVLVAGLYP 900
Query: 901 MVGRLLPPQKKGKRAVVETGSGGRVLLHRQSLNFELSHKLTDNCPLIVYDEITRGDGGTH 960
MVGRLLPPQKKGKRAVVETGSGGRVLLHRQSLNFELSHKLTDNCPLIVYDEITRGDGGTH
Sbjct: 901 MVGRLLPPQKKGKRAVVETGSGGRVLLHRQSLNFELSHKLTDNCPLIVYDEITRGDGGTH 960
Query: 961 IRNCTVVGPLPLLMVAKEIAVAPAKENDNGKGDIVNDTYGNDEAGVVETVEDKMDIENKS 1020
IRNCTVVGPLPLLMVAKEIAVAPAKENDNGKGDIVNDTYGNDEAGVVETVEDKMDIENKS
Sbjct: 961 IRNCTVVGPLPLLMVAKEIAVAPAKENDNGKGDIVNDTYGNDEAGVVETVEDKMDIENKS 1020
Query: 1021 NEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVKHPNKILPP 1080
NEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVKHPNKILPP
Sbjct: 1021 NEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVKHPNKILPP 1080
Query: 1081 VLGASMHALACILSYDGLTGISLESVEMLTTMVDATEISNFVPGRSNETHKKVSSFHRSL 1140
VLGASMHALACILSYDGLTGISLESVEMLTTMVDATEISNFVPGRSNETHKKVSSFHRSL
Sbjct: 1081 VLGASMHALACILSYDGLTGISLESVEMLTTMVDATEISNFVPGRSNETHKKVSSFHRSL 1140
Query: 1141 SNYNDFTVPESSGTSNLNHPFSQNFLPPPDFRAANPSDPSSPNFRAFPNSVYARSTLQPH 1200
SNYNDFTVPESSGTSNLNHPFSQNFLPPPDFRAANPSDPSSPNFRAFPNSVYARSTLQPH
Sbjct: 1141 SNYNDFTVPESSGTSNLNHPFSQNFLPPPDFRAANPSDPSSPNFRAFPNSVYARSTLQPH 1200
Query: 1201 REQEHPQPAKPFQDQNATQQQHAPEHKTRKQRKSRRERKAAQQQKHPQLQKPPSGEPSLN 1260
REQEHPQPAKPFQDQNATQQQHAPEHKTRKQRKSRRERKAAQQQKHPQLQKPPSGEPSLN
Sbjct: 1201 REQEHPQPAKPFQDQNATQQQHAPEHKTRKQRKSRRERKAAQQQKHPQLQKPPSGEPSLN 1260
Query: 1261 GYGLSTYGPYGLRGISLKRPR 1282
GYGLSTYGPYGLRGISLKRPR
Sbjct: 1261 GYGLSTYGPYGLRGISLKRPR 1281
BLAST of Carg13121 vs. NCBI nr
Match:
XP_022941757.1 (DExH-box ATP-dependent RNA helicase DExH6 isoform X1 [Cucurbita moschata] >XP_022941758.1 DExH-box ATP-dependent RNA helicase DExH6 isoform X1 [Cucurbita moschata])
HSP 1 Score: 2506.9 bits (6496), Expect = 0.0e+00
Identity = 1280/1286 (99.53%), Postives = 1282/1286 (99.69%), Query Frame = 0
Query: 1 MAKKKQKKGEQKPKPKAFADADSEITQALERFCLSNDEVFTFEADLSKRERALVHEECRK 60
MAKKKQKKGEQKPKPKAFA ADSEIT+ALERFCLSNDEVFTFEADLSKRERALVHEECRK
Sbjct: 1 MAKKKQKKGEQKPKPKAFAVADSEITRALERFCLSNDEVFTFEADLSKRERALVHEECRK 60
Query: 61 MGLTSKSYGRGDQRRVSIYKSKPQKDTMKFSEKTKSVLDDLFSSYPPDDGELGRETIGKC 120
MGLTSKSYGRGDQRRVSIYKSKPQKDTMKFSEKTKSVLDDLFSSYPPDDGELGRETIGKC
Sbjct: 61 MGLTSKSYGRGDQRRVSIYKSKPQKDTMKFSEKTKSVLDDLFSSYPPDDGELGRETIGKC 120
Query: 121 KKKTHKQSRKKDDIFWRPLMNKEEIMKKVESYTTRVKSVANLKKISGDRSKLPIASFQDV 180
KKKTHKQSRKKDDIFWRP MNKEEIMKKVESYTTRVKSVANLKKISGDRSKLPIASFQDV
Sbjct: 121 KKKTHKQSRKKDDIFWRPSMNKEEIMKKVESYTTRVKSVANLKKISGDRSKLPIASFQDV 180
Query: 181 ITSTVESHQVVLISGETGCGKTTQVPQFLLDYMWGKGEACKIICTQPRRISATSVSERIS 240
ITSTVESHQVVLISGETGCGKTTQVPQFLLDYMWGKGEACKIICTQPRRISATSVSERIS
Sbjct: 181 ITSTVESHQVVLISGETGCGKTTQVPQFLLDYMWGKGEACKIICTQPRRISATSVSERIS 240
Query: 241 YERGENVGSDVGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLTTEASEKSRKNVV 300
YERGENVGSDVGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLTTEASEKSRKNVV
Sbjct: 241 YERGENVGSDVGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLTTEASEKSRKNVV 300
Query: 301 SDLTHIIVDEVHERDRYSDFILAILRDLLPTYPHLRLILMSATIDAERFSKYFGGCPIIS 360
SDLTHIIVDEVHERDRYSDFILAILRDLLPTYPHLRLILMSATIDAERFSKYFGGCPIIS
Sbjct: 301 SDLTHIIVDEVHERDRYSDFILAILRDLLPTYPHLRLILMSATIDAERFSKYFGGCPIIS 360
Query: 361 VPGFTFPVKNFYLEDVLSIVKSSEENHLDDSTVGASDEETELTEEDKLSLDEAIQLAWLN 420
VPGFTFPVKNFYLEDVLSIVKSSEENHLDDSTVGASDEETELTEEDKLSLDEAI LAWLN
Sbjct: 361 VPGFTFPVKNFYLEDVLSIVKSSEENHLDDSTVGASDEETELTEEDKLSLDEAIHLAWLN 420
Query: 421 DEFDPLLELVASEGSSQIFNYQHSVTGLSPLMVLAGKGRVSDVCMLLSFGAMCELQAKDG 480
DEFDPLLELVASEGSSQIFNYQHSVTGLSPLMVLAGKGRVSDVCMLLSFGAMCELQAKDG
Sbjct: 421 DEFDPLLELVASEGSSQIFNYQHSVTGLSPLMVLAGKGRVSDVCMLLSFGAMCELQAKDG 480
Query: 481 MTALEMAERGEHKETAEAIRKHLESSMSNSKEEQRLIGKYLARNSNSVDVALIDLLLGKI 540
MTALEMAERGEHKETAEAIRKHLESSMSNSKEEQRLIGKYLARNSNSVDVALIDLLLGKI
Sbjct: 481 MTALEMAERGEHKETAEAIRKHLESSMSNSKEEQRLIGKYLARNSNSVDVALIDLLLGKI 540
Query: 541 CLDSKEGAILVFLPGWDDISKTRERLSINPIFKDASKFLIISLHSMVPSKEQKKVFKRPP 600
CLDSKEGAILVFLPGWDDISKTRERLSINPIFKDASKFLIISLHSMVPSKEQKKVFKRPP
Sbjct: 541 CLDSKEGAILVFLPGWDDISKTRERLSINPIFKDASKFLIISLHSMVPSKEQKKVFKRPP 600
Query: 601 PGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVSTFQSSWISKASAKQREG 660
PGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVSTFQSSWISKASAKQREG
Sbjct: 601 PGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVSTFQSSWISKASAKQREG 660
Query: 661 RAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDPNCRIEDFLQKTLD 720
RAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDPNCRIEDFLQKTLD
Sbjct: 661 RAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDPNCRIEDFLQKTLD 720
Query: 721 PPVFDTIRNAILVLQDIGALSLDEKLTELGEKLGSLPVHPVTSKMLIFAILMNCLEPALT 780
PPVFDTIRNAILVLQDIGALSLDEKLTELGEKLGSLPVHPVTSKMLIFAILMNCLEPALT
Sbjct: 721 PPVFDTIRNAILVLQDIGALSLDEKLTELGEKLGSLPVHPVTSKMLIFAILMNCLEPALT 780
Query: 781 LACASDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKNAKRRGQEA 840
LACASDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKNAKRRGQEA
Sbjct: 781 LACASDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKNAKRRGQEA 840
Query: 841 RFCSKYHISPSTMSMLFGMRRQLEMELVQNGFIPEDISTCSLNARDPGILHAVLVAGLYP 900
RFCSKYHISPSTMSMLFGMRRQLEMELVQNGFIPEDISTCSLNARDPGILHAVLVAGLYP
Sbjct: 841 RFCSKYHISPSTMSMLFGMRRQLEMELVQNGFIPEDISTCSLNARDPGILHAVLVAGLYP 900
Query: 901 MVGRLLPPQKKGKRAVVETGSGGRVLLHRQSLNFELSHKLTDNCPLIVYDEITRGDGGTH 960
MVGRLLPPQKKGKRAVVETGSGGRVLLHRQSLNFELSHKLTDNCPLIVYDEITRGDGGTH
Sbjct: 901 MVGRLLPPQKKGKRAVVETGSGGRVLLHRQSLNFELSHKLTDNCPLIVYDEITRGDGGTH 960
Query: 961 IRNCTVVGPLPLLMVAKEIAVAPAKENDNGKGDIVNDTYGNDEAGVVETVEDKMDIENKS 1020
IRNCTVVGPLPLLMVAKEIAVAPAKENDNGKGDIVNDTYGNDEAGVVETVEDKMDIENKS
Sbjct: 961 IRNCTVVGPLPLLMVAKEIAVAPAKENDNGKGDIVNDTYGNDEAGVVETVEDKMDIENKS 1020
Query: 1021 NEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVKHPNKILPP 1080
NEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVKHPNKILPP
Sbjct: 1021 NEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVKHPNKILPP 1080
Query: 1081 VLGASMHALACILSYDGLTGISLESVEMLTTMVDATEISNFVPGRSNETHKKVSSFHRSL 1140
VLGASMHALACILSYDGLTGISLESVEMLTTMVDATEISNFVPGRSNETHKKVSSFHRSL
Sbjct: 1081 VLGASMHALACILSYDGLTGISLESVEMLTTMVDATEISNFVPGRSNETHKKVSSFHRSL 1140
Query: 1141 SNYNDFTVPESSGTSNLNHPFSQNFLPPPDFRAANPSDPSSPNFRAFPNSVYARSTLQPH 1200
SNYNDFTVPESSGTSNLNHPFSQNFLPPPDFRAANPSDPSSPNFRAFPNSVYARSTLQPH
Sbjct: 1141 SNYNDFTVPESSGTSNLNHPFSQNFLPPPDFRAANPSDPSSPNFRAFPNSVYARSTLQPH 1200
Query: 1201 REQEHPQPAKPFQDQNATQQQHAPEHKTRKQRKSRRERKAAQQQKHPQLQKPPSGEPSLN 1260
R Q+HPQPAKPFQDQNATQQQHAPEHKTRKQRKSRRERKAAQQQKHPQLQKPPSGEPSLN
Sbjct: 1201 RGQKHPQPAKPFQDQNATQQQHAPEHKTRKQRKSRRERKAAQQQKHPQLQKPPSGEPSLN 1260
Query: 1261 GYGLSTYGPYGLRGISLKRPRGNGAG 1287
GYGLSTYGPYGLRGISLKRPRGNGAG
Sbjct: 1261 GYGLSTYGPYGLRGISLKRPRGNGAG 1286
BLAST of Carg13121 vs. NCBI nr
Match:
XP_023512682.1 (DExH-box ATP-dependent RNA helicase DExH6 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023512690.1 DExH-box ATP-dependent RNA helicase DExH6 isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 2493.8 bits (6462), Expect = 0.0e+00
Identity = 1275/1286 (99.14%), Postives = 1277/1286 (99.30%), Query Frame = 0
Query: 1 MAKKKQKKGEQKPKPKAFADADSEITQALERFCLSNDEVFTFEADLSKRERALVHEECRK 60
MAKKKQKKGEQKPKPKAFADADSEITQALERFCLSNDEVFTFEADLSKRERALVHEECRK
Sbjct: 1 MAKKKQKKGEQKPKPKAFADADSEITQALERFCLSNDEVFTFEADLSKRERALVHEECRK 60
Query: 61 MGLTSKSYGRGDQRRVSIYKSKPQKDTMKFSEKTKSVLDDLFSSYPPDDGELGRETIGKC 120
MGLTSKSYGRGDQRRVSIYKSKPQKDTMKFSEKTKSVLDDLFSSYPPDDGELG+ETIGK
Sbjct: 61 MGLTSKSYGRGDQRRVSIYKSKPQKDTMKFSEKTKSVLDDLFSSYPPDDGELGKETIGKS 120
Query: 121 KKKTHKQSRKKDDIFWRPLMNKEEIMKKVESYTTRVKSVANLKKISGDRSKLPIASFQDV 180
KKK HK SRKKDDIFWRP MNKEEIMKKVESYTTRVKSVANLKKISGDRSKLPIASFQDV
Sbjct: 121 KKKAHKPSRKKDDIFWRPSMNKEEIMKKVESYTTRVKSVANLKKISGDRSKLPIASFQDV 180
Query: 181 ITSTVESHQVVLISGETGCGKTTQVPQFLLDYMWGKGEACKIICTQPRRISATSVSERIS 240
ITSTVESHQVVLISGETGCGKTTQVPQFLLDYMWGKGEACKIICTQPRRISATSVSERIS
Sbjct: 181 ITSTVESHQVVLISGETGCGKTTQVPQFLLDYMWGKGEACKIICTQPRRISATSVSERIS 240
Query: 241 YERGENVGSDVGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLTTEASEKSRKNVV 300
YERGENVGSDVGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLTTEASEKSRKNVV
Sbjct: 241 YERGENVGSDVGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLTTEASEKSRKNVV 300
Query: 301 SDLTHIIVDEVHERDRYSDFILAILRDLLPTYPHLRLILMSATIDAERFSKYFGGCPIIS 360
SDLTHIIVDEVHERDRYSDFILAILRDLLPTYPHLRLILMSATIDAERFSKYFGGCPIIS
Sbjct: 301 SDLTHIIVDEVHERDRYSDFILAILRDLLPTYPHLRLILMSATIDAERFSKYFGGCPIIS 360
Query: 361 VPGFTFPVKNFYLEDVLSIVKSSEENHLDDSTVGASDEETELTEEDKLSLDEAIQLAWLN 420
VPGFTFPVKNFYLEDVLSIVKSSEENHLDDSTVGASDEETELTEEDKLSLDEAI LAWLN
Sbjct: 361 VPGFTFPVKNFYLEDVLSIVKSSEENHLDDSTVGASDEETELTEEDKLSLDEAIHLAWLN 420
Query: 421 DEFDPLLELVASEGSSQIFNYQHSVTGLSPLMVLAGKGRVSDVCMLLSFGAMCELQAKDG 480
DEFDPLLELVASEGSSQIFNYQHSVTGLSPLMVLAGKGRVSDVCMLLSFGAMCELQAKDG
Sbjct: 421 DEFDPLLELVASEGSSQIFNYQHSVTGLSPLMVLAGKGRVSDVCMLLSFGAMCELQAKDG 480
Query: 481 MTALEMAERGEHKETAEAIRKHLESSMSNSKEEQRLIGKYLARNSNSVDVALIDLLLGKI 540
MTALEMAERGEHKETAEAIRKHLESSMSNSKEEQRLIGKYLARNSNSVDVALIDLLLGKI
Sbjct: 481 MTALEMAERGEHKETAEAIRKHLESSMSNSKEEQRLIGKYLARNSNSVDVALIDLLLGKI 540
Query: 541 CLDSKEGAILVFLPGWDDISKTRERLSINPIFKDASKFLIISLHSMVPSKEQKKVFKRPP 600
CLDSKEGAILVFLPGWDDISKTRERLSINPIFKDASKFLIISLHSMVPSKEQKKVFKRPP
Sbjct: 541 CLDSKEGAILVFLPGWDDISKTRERLSINPIFKDASKFLIISLHSMVPSKEQKKVFKRPP 600
Query: 601 PGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVSTFQSSWISKASAKQREG 660
PGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVSTFQSSWISKASAKQREG
Sbjct: 601 PGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVSTFQSSWISKASAKQREG 660
Query: 661 RAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDPNCRIEDFLQKTLD 720
RAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDPNCRIEDFLQKTLD
Sbjct: 661 RAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDPNCRIEDFLQKTLD 720
Query: 721 PPVFDTIRNAILVLQDIGALSLDEKLTELGEKLGSLPVHPVTSKMLIFAILMNCLEPALT 780
PPVFDTIRNAILVLQDIGALS DEKLTELGEKLGSLPVHPVTSKMLIFAILMNCLEPALT
Sbjct: 721 PPVFDTIRNAILVLQDIGALSHDEKLTELGEKLGSLPVHPVTSKMLIFAILMNCLEPALT 780
Query: 781 LACASDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKNAKRRGQEA 840
LACASDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKNAKRRGQEA
Sbjct: 781 LACASDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKNAKRRGQEA 840
Query: 841 RFCSKYHISPSTMSMLFGMRRQLEMELVQNGFIPEDISTCSLNARDPGILHAVLVAGLYP 900
RFCSKYHISPSTMSMLFGMRRQLEMELVQNGFIPEDISTCSLNARDPGILHAVLVAGLYP
Sbjct: 841 RFCSKYHISPSTMSMLFGMRRQLEMELVQNGFIPEDISTCSLNARDPGILHAVLVAGLYP 900
Query: 901 MVGRLLPPQKKGKRAVVETGSGGRVLLHRQSLNFELSHKLTDNCPLIVYDEITRGDGGTH 960
MVGRLLPPQKKGKRAVVETGSGGRVLLHRQSLNFELSHKLTD CPLIVYDEITRGDGGTH
Sbjct: 901 MVGRLLPPQKKGKRAVVETGSGGRVLLHRQSLNFELSHKLTDYCPLIVYDEITRGDGGTH 960
Query: 961 IRNCTVVGPLPLLMVAKEIAVAPAKENDNGKGDIVNDTYGNDEAGVVETVEDKMDIENKS 1020
IRNCTVVGPLPLLMVAKEIAVAPAKENDNGKGDIVNDT GNDEAGVVETVEDKMDIENK
Sbjct: 961 IRNCTVVGPLPLLMVAKEIAVAPAKENDNGKGDIVNDTDGNDEAGVVETVEDKMDIENKP 1020
Query: 1021 NEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVKHPNKILPP 1080
NEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVKHPNKILPP
Sbjct: 1021 NEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVKHPNKILPP 1080
Query: 1081 VLGASMHALACILSYDGLTGISLESVEMLTTMVDATEISNFVPGRSNETHKKVSSFHRSL 1140
VLGASMHALACILSYDGLTGISLESVEMLT+MVDATEISNFVPGRSNETHKKVSSFHRSL
Sbjct: 1081 VLGASMHALACILSYDGLTGISLESVEMLTSMVDATEISNFVPGRSNETHKKVSSFHRSL 1140
Query: 1141 SNYNDFTVPESSGTSNLNHPFSQNFLPPPDFRAANPSDPSSPNFRAFPNSVYARSTLQPH 1200
SNYNDFTVPESSGTSNLNHPFSQNFLPPPDFRAANPSDPSSPNFRAFPNSVYARSTLQPH
Sbjct: 1141 SNYNDFTVPESSGTSNLNHPFSQNFLPPPDFRAANPSDPSSPNFRAFPNSVYARSTLQPH 1200
Query: 1201 REQEHPQPAKPFQDQNATQQQHAPEHKTRKQRKSRRERKAAQQQKHPQLQKPPSGEPSLN 1260
REQEHPQPAKPFQDQNATQQQHAPEHKTRKQRKSRRERKAAQQQKHPQLQKPPSGEPSLN
Sbjct: 1201 REQEHPQPAKPFQDQNATQQQHAPEHKTRKQRKSRRERKAAQQQKHPQLQKPPSGEPSLN 1260
Query: 1261 GYGLSTYGPYGLRGISLKRPRGNGAG 1287
GYGLSTYGPYGLRGISLKRPRGNGAG
Sbjct: 1261 GYGLSTYGPYGLRGISLKRPRGNGAG 1286
BLAST of Carg13121 vs. NCBI nr
Match:
XP_022978754.1 (DExH-box ATP-dependent RNA helicase DExH6 isoform X1 [Cucurbita maxima] >XP_022978761.1 DExH-box ATP-dependent RNA helicase DExH6 isoform X1 [Cucurbita maxima])
HSP 1 Score: 2473.7 bits (6410), Expect = 0.0e+00
Identity = 1259/1286 (97.90%), Postives = 1274/1286 (99.07%), Query Frame = 0
Query: 1 MAKKKQKKGEQKPKPKAFADADSEITQALERFCLSNDEVFTFEADLSKRERALVHEECRK 60
MAKKKQKKGEQKPKPKAFADADSEI QALERFCLSNDEVFTFEADLSKRERALVHEECRK
Sbjct: 1 MAKKKQKKGEQKPKPKAFADADSEIIQALERFCLSNDEVFTFEADLSKRERALVHEECRK 60
Query: 61 MGLTSKSYGRGDQRRVSIYKSKPQKDTMKFSEKTKSVLDDLFSSYPPDDGELGRETIGKC 120
MGLTSKSYGRGDQRRVSIYKSKPQKDTMKFSEKTKSVLDDLFSSYPPDDGELG+ETIGKC
Sbjct: 61 MGLTSKSYGRGDQRRVSIYKSKPQKDTMKFSEKTKSVLDDLFSSYPPDDGELGKETIGKC 120
Query: 121 KKKTHKQSRKKDDIFWRPLMNKEEIMKKVESYTTRVKSVANLKKISGDRSKLPIASFQDV 180
KKK HKQSR+KDDIFWRP MNKEEIMKKVESYTTRVKS+AN+KKISGDRSKLPIASFQDV
Sbjct: 121 KKKAHKQSRRKDDIFWRPSMNKEEIMKKVESYTTRVKSIANMKKISGDRSKLPIASFQDV 180
Query: 181 ITSTVESHQVVLISGETGCGKTTQVPQFLLDYMWGKGEACKIICTQPRRISATSVSERIS 240
ITSTVESHQVVLISGETGCGKTTQVPQFLLDYMWGKGEACKIICTQPRRISATSVSERIS
Sbjct: 181 ITSTVESHQVVLISGETGCGKTTQVPQFLLDYMWGKGEACKIICTQPRRISATSVSERIS 240
Query: 241 YERGENVGSDVGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLTTEASEKSRKNVV 300
YERGENVGSDVGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLT +ASEKSRKNVV
Sbjct: 241 YERGENVGSDVGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLTMDASEKSRKNVV 300
Query: 301 SDLTHIIVDEVHERDRYSDFILAILRDLLPTYPHLRLILMSATIDAERFSKYFGGCPIIS 360
SDLTHIIVDEVHERDR+SDFILAILRDLLPTYPHLRLILMSATIDAERFSKYFGGCPIIS
Sbjct: 301 SDLTHIIVDEVHERDRFSDFILAILRDLLPTYPHLRLILMSATIDAERFSKYFGGCPIIS 360
Query: 361 VPGFTFPVKNFYLEDVLSIVKSSEENHLDDSTVGASDEETELTEEDKLSLDEAIQLAWLN 420
VPGFTFPVKN YLEDVLSIVKSSEENHLDDSTVGASDEETELTEEDKLSLDEAI LAWLN
Sbjct: 361 VPGFTFPVKNLYLEDVLSIVKSSEENHLDDSTVGASDEETELTEEDKLSLDEAIHLAWLN 420
Query: 421 DEFDPLLELVASEGSSQIFNYQHSVTGLSPLMVLAGKGRVSDVCMLLSFGAMCELQAKDG 480
+EFDPLLELVASEGSSQI+NYQHS+TGLSPLMVLAGKGRVSDVCMLLSFGAMCELQAKDG
Sbjct: 421 EEFDPLLELVASEGSSQIYNYQHSLTGLSPLMVLAGKGRVSDVCMLLSFGAMCELQAKDG 480
Query: 481 MTALEMAERGEHKETAEAIRKHLESSMSNSKEEQRLIGKYLARNSNSVDVALIDLLLGKI 540
MTALEMAERGEHKETAEAIRKHLESSMSNSKEEQRLIGKYLA+NSNSVDVALIDLLLGKI
Sbjct: 481 MTALEMAERGEHKETAEAIRKHLESSMSNSKEEQRLIGKYLAKNSNSVDVALIDLLLGKI 540
Query: 541 CLDSKEGAILVFLPGWDDISKTRERLSINPIFKDASKFLIISLHSMVPSKEQKKVFKRPP 600
CLDSKEGAILVFLPGWDDISKTRERLSINPIFKDASKFLIISLHSMVPSKEQKKVFKRPP
Sbjct: 541 CLDSKEGAILVFLPGWDDISKTRERLSINPIFKDASKFLIISLHSMVPSKEQKKVFKRPP 600
Query: 601 PGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVSTFQSSWISKASAKQREG 660
GCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPY NVSTFQSSWISKASAKQREG
Sbjct: 601 SGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYRNVSTFQSSWISKASAKQREG 660
Query: 661 RAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDPNCRIEDFLQKTLD 720
RAGRCQPGICYHLYSK RASSLPDFQVPEIKRMPIEELCLQVKLLDPNCRIEDFLQKTLD
Sbjct: 661 RAGRCQPGICYHLYSKVRASSLPDFQVPEIKRMPIEELCLQVKLLDPNCRIEDFLQKTLD 720
Query: 721 PPVFDTIRNAILVLQDIGALSLDEKLTELGEKLGSLPVHPVTSKMLIFAILMNCLEPALT 780
PPVFDTIRNAILVLQDIGALSLDEKLTELGEKLGSLPVHPVTSKMLIFAILMNCL+PALT
Sbjct: 721 PPVFDTIRNAILVLQDIGALSLDEKLTELGEKLGSLPVHPVTSKMLIFAILMNCLDPALT 780
Query: 781 LACASDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKNAKRRGQEA 840
LACASDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAF+CWKNAKRRGQEA
Sbjct: 781 LACASDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFNCWKNAKRRGQEA 840
Query: 841 RFCSKYHISPSTMSMLFGMRRQLEMELVQNGFIPEDISTCSLNARDPGILHAVLVAGLYP 900
RFCS YHISPSTMSMLFGMRRQLEMELVQNGFIPEDISTCSLNARDPGILHAVLVAGLYP
Sbjct: 841 RFCSNYHISPSTMSMLFGMRRQLEMELVQNGFIPEDISTCSLNARDPGILHAVLVAGLYP 900
Query: 901 MVGRLLPPQKKGKRAVVETGSGGRVLLHRQSLNFELSHKLTDNCPLIVYDEITRGDGGTH 960
MVGRLLPPQKKGKRAVVETGSGGRVLLHRQSLNFELSHKLTDNCPLIVYDEITRGDGGTH
Sbjct: 901 MVGRLLPPQKKGKRAVVETGSGGRVLLHRQSLNFELSHKLTDNCPLIVYDEITRGDGGTH 960
Query: 961 IRNCTVVGPLPLLMVAKEIAVAPAKENDNGKGDIVNDTYGNDEAGVVETVEDKMDIENKS 1020
IRNCTVVGPLPLLMVAKEIAVAPAKENDNGKGDIVNDT GNDEAGVVETVEDKMDIEN+S
Sbjct: 961 IRNCTVVGPLPLLMVAKEIAVAPAKENDNGKGDIVNDTDGNDEAGVVETVEDKMDIENRS 1020
Query: 1021 NEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVKHPNKILPP 1080
NEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVKHPNK+LPP
Sbjct: 1021 NEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVKHPNKVLPP 1080
Query: 1081 VLGASMHALACILSYDGLTGISLESVEMLTTMVDATEISNFVPGRSNETHKKVSSFHRSL 1140
VLGASMHALACILSYDGLTGISLESVEMLTTMVDATEISNFVPGRSNETHKKVSSFHRSL
Sbjct: 1081 VLGASMHALACILSYDGLTGISLESVEMLTTMVDATEISNFVPGRSNETHKKVSSFHRSL 1140
Query: 1141 SNYNDFTVPESSGTSNLNHPFSQNFLPPPDFRAANPSDPSSPNFRAFPNSVYARSTLQPH 1200
SNYNDFTVPESSGTSNLNHPFSQNFLPP DFRAANPSDPSSPNFRAFPNSVYARSTLQPH
Sbjct: 1141 SNYNDFTVPESSGTSNLNHPFSQNFLPPADFRAANPSDPSSPNFRAFPNSVYARSTLQPH 1200
Query: 1201 REQEHPQPAKPFQDQNATQQQHAPEHKTRKQRKSRRERKAAQQQKHPQLQKPPSGEPSLN 1260
REQEHPQPAKPFQDQNATQQQHAPEHKTRKQRKSRRERKAAQQQKHPQLQKPPSG+PSLN
Sbjct: 1201 REQEHPQPAKPFQDQNATQQQHAPEHKTRKQRKSRRERKAAQQQKHPQLQKPPSGDPSLN 1260
Query: 1261 GYGLSTYGPYGLRGISLKRPRGNGAG 1287
GYGLSTYGPYGLRGISLKRPRGNGAG
Sbjct: 1261 GYGLSTYGPYGLRGISLKRPRGNGAG 1286
BLAST of Carg13121 vs. ExPASy Swiss-Prot
Match:
F4INY4 (DExH-box ATP-dependent RNA helicase DExH6 OS=Arabidopsis thaliana OX=3702 GN=HVT1 PE=2 SV=1)
HSP 1 Score: 1308.5 bits (3385), Expect = 0.0e+00
Identity = 715/1261 (56.70%), Postives = 894/1261 (70.90%), Query Frame = 0
Query: 1 MAKKKQKKGEQKPKPKAFADADSEITQALERFCLSNDEVFTFEADLSKRERALVHEECRK 60
M K+ + KP + T+ +E F S +EV+TFE +LS ER ++H+ CRK
Sbjct: 1 MGNKRFRSDNNAGKPTSVEATRIWATKVIEDFRASGNEVYTFEHNLSNNERGVIHQMCRK 60
Query: 61 MGLTSKSYGRGDQRRVSIYKS------------KPQKDTMK---FSEKTKSVLDDLFSSY 120
MG+ SKS GRG+QRR+SI+KS K K+ +K F +L +LF+ Y
Sbjct: 61 MGIQSKSSGRGEQRRLSIFKSRHKNGNKNEANEKSNKEKLKCVSFPPGADVILQELFTHY 120
Query: 121 PPDDGELGRETIGKCKKKTHKQSRKKDDIFWRPLMNKEEIMKKVESYTTRVKSVANLKKI 180
PP DG+ + K KQ + KDD F +P ++ EEI++KV S ++R+K LK+I
Sbjct: 121 PPCDGDTAATSFTKYSGNKGKQGQWKDDFFRKPQISSEEILEKVASLSSRLKKDKALKEI 180
Query: 181 SGDRSKLPIASFQDVITSTVESHQVVLISGETGCGKTTQVPQFLLDYMW-GKGEACKIIC 240
+ RSKLPI SF+D ITS VES+QV+LISGETGCGKTTQVPQ+LLD+MW K E CKI+C
Sbjct: 181 TKLRSKLPITSFKDAITSAVESNQVILISGETGCGKTTQVPQYLLDHMWSSKRETCKIVC 240
Query: 241 TQPRRISATSVSERISYERGENVGSDVGYKIRLESKGGRHSSIVLCTNGILLRVLISEGL 300
TQPRRISA SVSERIS ERGE++G ++GYK+RL+SKGGRHSS+V CTNGILLRVL+ +G
Sbjct: 241 TQPRRISAMSVSERISCERGESIGENIGYKVRLQSKGGRHSSVVFCTNGILLRVLVGKG- 300
Query: 301 GKLTTEASEKSRKNVVSDLTHIIVDEVHERDRYSDFILAILRDLLPTYPHLRLILMSATI 360
+ VSD+THIIVDE+HERD YSDF+LAI+RDLLP+ PHLRLILMSAT+
Sbjct: 301 -----------SVSSVSDITHIIVDEIHERDCYSDFMLAIIRDLLPSNPHLRLILMSATL 360
Query: 361 DAERFSKYFGGCPIISVPGFTFPVKNFYLEDVLSIVKSSEENHLDDSTVGASDEETELTE 420
DAERFS YFGGCP++ VPGFT+PV+ YLEDVLSI+KS +NHL + + SD + +LT+
Sbjct: 361 DAERFSGYFGGCPVVRVPGFTYPVRTLYLEDVLSILKSGGDNHLSSTNLSISDHKLDLTD 420
Query: 421 EDKLSLDEAIQLAWLNDEFDPLLELVASEGSSQIFNYQHSVTGLSPLMVLAGKGRVSDVC 480
EDKL+LDEAI LAW NDEFD LL+LV+S GS +I+NYQH T L+PLMV AGKGR+SDVC
Sbjct: 421 EDKLALDEAIILAWTNDEFDALLDLVSSRGSHEIYNYQHQSTWLTPLMVFAGKGRISDVC 480
Query: 481 MLLSFGAMCELQAKDGMTALEMAERGEHKETAEAIRKHLESSMSNSKEEQRLIGKYLAR- 540
MLLSFGA L++KDGMTALE+AE E A+ IR+H ++S SNS++ Q+L+ KY+A
Sbjct: 481 MLLSFGADWSLKSKDGMTALELAEAENQLEAAQIIREHADNSQSNSQQGQQLLDKYMATI 540
Query: 541 NSNSVDVALIDLLLGKICLDSKEGAILVFLPGWDDISKTRERLSINPIFKDASKFLIISL 600
N VDV+LI L+ KIC DS++GAILVFLPGWDDI+KTR+RL NP F D++KF II L
Sbjct: 541 NPEQVDVSLIQQLMRKICGDSEDGAILVFLPGWDDINKTRQRLLENPFFADSAKFDIICL 600
Query: 601 HSMVPSKEQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVS 660
HSMVP+ EQKKVF RPPPGCRKI+L+TNIAE+A+TIDDVVYVIDSG MKEKSYDPY+NVS
Sbjct: 601 HSMVPAGEQKKVFNRPPPGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNNVS 660
Query: 661 TFQSSWISKASAKQREGRAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVK 720
T QSSW+SKA+AKQR+GRAGRCQPGICYHLYS+ RA+S+PDF+VPEIKRMP+EELCLQVK
Sbjct: 661 TLQSSWVSKANAKQRQGRAGRCQPGICYHLYSRLRAASMPDFKVPEIKRMPVEELCLQVK 720
Query: 721 LLDPNCRIEDFLQKTLDPPVFDTIRNAILVLQDIGALSLDEKLTELGEKLGSLPVHPVTS 780
+LDPNC+ DFLQK LDPPV +I NA+ +LQDIGAL+ E+LTELGEK G LPVHP+ S
Sbjct: 721 ILDPNCKTNDFLQKLLDPPVDQSIANALSILQDIGALTPQEELTELGEKFGHLPVHPLIS 780
Query: 781 KMLIFAILMNCLEPALTLACASDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAV 840
KML FA+L+NCL+PALTLACA+DYK+PFT+PM P ER+KAAAAK ELASL GG SD LAV
Sbjct: 781 KMLFFAVLVNCLDPALTLACAADYKEPFTMPMSPVERQKAAAAKLELASLCGGDSDHLAV 840
Query: 841 VAAFDCWKNAKRRGQEARFCSKYHISPSTMSMLFGMRRQLEMELVQNGFIPEDISTCSLN 900
VAAF+CWKNAK RG A FCS+Y +SPS M ML MR QLE EL ++G IP DIS+CS N
Sbjct: 841 VAAFECWKNAKGRGLSAEFCSQYFVSPSAMKMLDQMRSQLESELKRHGIIPNDISSCSQN 900
Query: 901 ARDPGILHAVLVAGLYPMVGRLLPPQKKGKRAVVETGSGGRVLLHRQSLNFELSHKLTDN 960
+RDPGIL AVL GLYPMVGRL P +R +VET SG +V +H S NF LS K D
Sbjct: 901 SRDPGILRAVLAVGLYPMVGRLCPAFGNNRRTIVETASGAKVRVHSLSNNFNLSSKKYDE 960
Query: 961 CPLIVYDEITRGDGGTHIRNCTVVGPLPLLMVAKEIAVAPAKENDNG-----KGDIVNDT 1020
L+V+DEITRGDGG HIRNCTV LPLL+++ EIAVAP +D+ + D
Sbjct: 961 -SLLVFDEITRGDGGMHIRNCTVARDLPLLLISTEIAVAPTGSSDSDDSNEEEEDDEEVA 1020
Query: 1021 YGNDEAGVVETVEDKMDIENKSNEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYC 1080
+E T E+ MDI + + + +M MSSP+NSV +VVDRWL F + AL++AQ+Y
Sbjct: 1021 ANTNEEVAANTNEEGMDIHKEESRRGAKM-MSSPENSVKLVVDRWLPFRTTALEVAQMYI 1080
Query: 1081 LRERLSAAILFKVKHPNKILPPVLGASMHALACILSYDGLTGISLESVEMLTTMVDATEI 1140
LRERL A+ILFKV HP + LPP LGASMHA+A ILSYDG G+S E + TE+
Sbjct: 1081 LRERLMASILFKVTHPREHLPPHLGASMHAIAGILSYDGHAGLSCPP-ESMVPKHSRTEM 1140
Query: 1141 SNFVPGRSNETHKKVSSFHRSLSNYNDFTVPESSGTSNLNHPFSQNFLPPPDFRAANPSD 1200
+ + +K +SF SL + ++ E+ S+ N N+ P A S
Sbjct: 1141 YD-----TGGWEEKPNSFLNSL--FWSLSLKENKHPSHTNRNQQHNYNMAPTEAA---SI 1200
Query: 1201 PSSPNFRAFPNSVYARSTLQPHREQEHPQPAKPFQDQNATQQQHAPEHKTRKQRKSRRER 1240
P N++ + +E+ P A +HK+ S ++
Sbjct: 1201 PRQQNYKQRNPKATNNTDSGKKKEKMFVNPTNRINQPEAASTGKPSKHKSANSSGSSNKK 1236
BLAST of Carg13121 vs. ExPASy Swiss-Prot
Match:
F4IDQ6 (DExH-box ATP-dependent RNA helicase DExH2 OS=Arabidopsis thaliana OX=3702 GN=NIH PE=1 SV=1)
HSP 1 Score: 1200.7 bits (3105), Expect = 0.0e+00
Identity = 643/1152 (55.82%), Postives = 819/1152 (71.09%), Query Frame = 0
Query: 26 TQALERFCLSNDEVFTFEADLSKRERALVHEECRKMGLTSKSYGRGDQRRVSIYK----S 85
T+ LE F S ++ + FE L+ ER ++H+ CR MGL SKS G G++RR+S++K S
Sbjct: 22 TKVLEDFRASGNDSYVFEQQLTNSERGIIHQMCRTMGLRSKSNGSGEERRLSLFKGDGIS 81
Query: 86 KPQKDTM----------------------------------------------KFSEKTK 145
K K M F + K
Sbjct: 82 KSDKRRMYEARNQKEKEGDGISKSYSKHRYETRFQKAGGIRKTRISPKKLKCVSFPPEAK 141
Query: 146 SVLDDLFSSYPPDDGELGRETIGKCKKKTHKQSRKKDDIFWRPLMNKEEIMKKVESYTTR 205
+VL DLF+ YPP DG+ ++G + S KDD F +P M K +I V S ++R
Sbjct: 142 AVLHDLFTRYPPCDGDTTGTSLG-IYTTGNVNSNWKDDFFKKPHMTKHDIENNVVSLSSR 201
Query: 206 VKSVANLKKISGDRSKLPIASFQDVITSTVESHQVVLISGETGCGKTTQVPQFLLDYMW- 265
+K + ++I RSKLPIASF+D I S VES+QVVLI+GETGCGKTTQVPQ+LLD+MW
Sbjct: 202 LKKERHFREIFEARSKLPIASFRDAIISAVESNQVVLIAGETGCGKTTQVPQYLLDHMWH 261
Query: 266 GKGEACKIICTQPRRISATSVSERISYERGENVGSDVGYKIRLESKGGRHSSIVLCTNGI 325
K EACKIICTQPRRISA SVS+RIS+ERGE +G VGYK+RL+S+GGR SS+V CTNGI
Sbjct: 262 SKKEACKIICTQPRRISAISVSDRISWERGETIGRTVGYKVRLQSEGGRESSVVFCTNGI 321
Query: 326 LLRVLISEGLGKLTTEASEKSRKNVVSDLTHIIVDEVHERDRYSDFILAILRDLLPTYPH 385
LLRVLI +G+ + V D+THIIVDE+HERD YSDF+L ILRDLLP+ PH
Sbjct: 322 LLRVLIGKGV------------NSSVPDITHIIVDEIHERDSYSDFMLMILRDLLPSNPH 381
Query: 386 LRLILMSATIDAERFSKYFGGCPIISVPGFTFPVKNFYLEDVLSIVKSSEENHLDDSTVG 445
LRLILMSAT+DAERFS+YFGGCP++ VPGFT+PV+ F+L+D LS++ S + +HL
Sbjct: 382 LRLILMSATLDAERFSEYFGGCPVVRVPGFTYPVRTFFLDDALSVLNSDKNSHL------ 441
Query: 446 ASDEETELTEEDKLSLDEAIQLAWLNDEFDPLLELVASEGSSQIFNYQHSVTGLSPLMVL 505
S + + +EDK+SLDEAI LAW NDEFD L++LV+SEGS + +NYQ+S TGL+PLMV
Sbjct: 442 LSAVKRDFKDEDKVSLDEAIDLAWTNDEFDCLVDLVSSEGSHEAYNYQNSTTGLTPLMVF 501
Query: 506 AGKGRVSDVCMLLSFGAMCELQAKDGMTALEMAERGEHKETAEAIRKHLESSMSNSKEEQ 565
AGKGRVSDVC LLS GA C L++K+G+TALE+AE+ ETA+ IR+H + SNS++ Q
Sbjct: 502 AGKGRVSDVCKLLSVGADCTLKSKEGITALELAEKENQFETAQIIREHAGNIQSNSQQAQ 561
Query: 566 RLIGKYLAR-NSNSVDVALIDLLLGKICLDSKEGAILVFLPGWDDISKTRERLSINPIFK 625
L+ KY+A VDV LI L+ KIC DSK+GAILVFLPGW++ISKT+E+L + F
Sbjct: 562 DLLDKYMATIKPEEVDVGLIVKLMKKICSDSKDGAILVFLPGWEEISKTKEKLLDDRFFA 621
Query: 626 DASKFLIISLHSMVPSKEQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGWMKE 685
++KF+I+ LHS VP++EQKKVF RPP GCRKI+L+TNIAE+A+TIDDVVYVIDSG MKE
Sbjct: 622 HSAKFIILCLHSRVPAEEQKKVFNRPPRGCRKIVLATNIAESAVTIDDVVYVIDSGRMKE 681
Query: 686 KSYDPYSNVSTFQSSWISKASAKQREGRAGRCQPGICYHLYSKFRASSLPDFQVPEIKRM 745
KSYDPY++VST QSSW+SKA+AKQR GRAGRCQ GICYHLYSK RA+SLP+++VPE+ RM
Sbjct: 682 KSYDPYNDVSTLQSSWVSKANAKQRAGRAGRCQAGICYHLYSKLRAASLPEYRVPEVMRM 741
Query: 746 PIEELCLQVKLLDPNCRIEDFLQKTLDPPVFDTIRNAILVLQDIGALSLDEKLTELGEKL 805
P++ELCLQVK+LDPNC + DFLQK +DPPV +I NA+++L+DIGAL+ +E+LTELG+K
Sbjct: 742 PVDELCLQVKMLDPNCNVNDFLQKLMDPPVAQSIENALIILKDIGALTPEEELTELGQKF 801
Query: 806 GSLPVHPVTSKMLIFAILMNCLEPALTLACASDYKDPFTLPMLPSERKKAAAAKAELASL 865
G LPVHP SKM+ FAIL+NCL+PAL LACA+D KDPFT+P+ P +RKKAAAAK ELASL
Sbjct: 802 GQLPVHPRISKMIYFAILVNCLDPALILACAADEKDPFTMPLSPGDRKKAAAAKHELASL 861
Query: 866 YGGHSDQLAVVAAFDCWKNAKRRGQEARFCSKYHISPSTMSMLFGMRRQLEMELVQNGFI 925
YG HSD LA VAAF CWKNAK GQ FCSKY IS M L + R+L+ EL ++G I
Sbjct: 862 YGDHSDHLATVAAFQCWKNAKASGQAKEFCSKYFISQVVMKRLDDLCRKLQGELNRHGVI 921
Query: 926 PEDISTCSLNARDPGILHAVLVAGLYPMVGRLLPPQKKGKRAVVETGSGGRVLLHRQSLN 985
P S CSLNA DPGIL AV+ GLYPM+GR+ P K R+V+ET +G +V + S N
Sbjct: 922 PSSSSNCSLNAHDPGILRAVIAVGLYPMLGRMCPLSKNRTRSVIETIAGAKVRVPSLSNN 981
Query: 986 FELSHKLTDNCPLIVYDEITRGDGGTHIRNCTVVGPLPLLMVAKEIAVAPAKENDNGKGD 1045
++S D LIV+DEITRGD G IR+CTV+ +P+L+ ++EIAV+ + D K D
Sbjct: 982 VDMSSTKFDEA-LIVFDEITRGDWGVVIRSCTVLPTIPVLLFSREIAVSTTESYDAVKSD 1041
Query: 1046 IVNDTYGNDEAGVVETVEDKMDIENKSNEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDI 1105
++E V V D MDI+ K +P E IM P+NSV VVVDRWL F A +I
Sbjct: 1042 -------DEEDHKVGNVGDAMDID-KEVGRPGEKIMLGPENSVKVVVDRWLPFKVTAFEI 1101
Query: 1106 AQLYCLRERLSAAILFKVKHPNKILPPVLGASMHALACILSYDGLTGISLE--SVEMLTT 1124
AQ+Y LRERL A+ILFKVKHP + LPP LGASM+A+A +LSYD L S++ +V+ +T+
Sbjct: 1102 AQMYILRERLMASILFKVKHPKENLPPHLGASMYAIASVLSYDSLAQSSVQTVAVQPITS 1145
BLAST of Carg13121 vs. ExPASy Swiss-Prot
Match:
Q9H6S0 (3'-5' RNA helicase YTHDC2 OS=Homo sapiens OX=9606 GN=YTHDC2 PE=1 SV=2)
HSP 1 Score: 576.2 bits (1484), Expect = 8.9e-163
Identity = 398/1166 (34.13%), Postives = 604/1166 (51.80%), Query Frame = 0
Query: 28 ALERFCLSNDEVFTFEADLSKRERALVHEECRKMGLTSKSYGRGDQRRVSIYKSKPQKD- 87
ALERF + F + L+ ERA +H + +GL SKS G+G R +++ K +
Sbjct: 52 ALERFRYGDQREMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYLTVKKKDGSETA 111
Query: 88 ----TMKFSEKTKSVLDDLFSSYPPDDGELGRETIGKCKKKTHKQSRKKDDIFWRPLMNK 147
T + TK + L +P + E E + K ++ ++F N+
Sbjct: 112 HAMMTCNLTHNTKHAVRSLIQRFPVTNKE-RTELLPK---------TERGNVFAVEAENR 171
Query: 148 E--EIMKKVESYTTRVKSVANLKKISGDRSKLPIASFQDVITSTVESHQVVLISGETGCG 207
E + ++ + ++ + R LP+ Q+ I ++ ++VVLI GETG G
Sbjct: 172 EMSKTSGRLNNGIPQIPVKRGESEFDSFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSG 231
Query: 208 KTTQVPQFLLDYMWGKGEACKIICTQPRRISATSVSERISYERGENVGSDVGYKIRLESK 267
KTTQ+PQFLLD + G C+I CTQPRR++A +V+ER++ ER E +G +GY+IRLES+
Sbjct: 232 KTTQIPQFLLDDCFKNGIPCRIFCTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESR 291
Query: 268 GGRHSSIVLCTNGILLRVLISEGLGKLTTEASEKSRKNVVSDLTHIIVDEVHERDRYSDF 327
+ + CTNG+LLR L+ + + +S +TH+IVDEVHERDR+SDF
Sbjct: 292 VSPKTLLTFCTNGVLLRTLM--------------AGDSTLSTVTHVIVDEVHERDRFSDF 351
Query: 328 ILAILRDLLPTYPHLRLILMSATIDAERFSKYFGGCPIISVPGFTFPVKNFYLEDVLSIV 387
+L LRDLL +P L+LIL SA +D F +YFG CP+I + G F VK +LED+L
Sbjct: 352 LLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEMFLEDILRTT 411
Query: 388 -------------KSSEENHLDDSTVGASDEE---------------------------- 447
K EE T S +E
Sbjct: 412 GYTNKEMLKYKKEKQQEEKQQTTLTEWYSAQENSFKPESQRQRTVLNVTDEYDLLDDGGD 471
Query: 448 ---TELTEEDK--------LSLDEAIQLAWLN---DEFDPLLELVASEGSSQIFNYQHSV 507
++LTE+D +D + WL+ D F + L+ +E S +Y+HS
Sbjct: 472 AVFSQLTEKDVNCLEPWLIKEMDACLSDIWLHKDIDAFAQVFHLILTENVS--VDYRHSE 531
Query: 508 TGLSPLMVLAGKGRVSDVCMLLSFGAMCELQAKDGMTALEMAERGEHKETAEAIRKHL-- 567
T + LMV AG+G S V L+S GA +A +G AL+ A+ E + + +
Sbjct: 532 TSATALMVAAGRGFASQVEQLISMGANVHSKASNGWMALDWAKHFGQTEIVDLLESYSAT 591
Query: 568 -------ESSMSN------SKEEQRLIGKY-LARNSNSVDVALIDLLLGKICLDSKEGAI 627
ESS+ S E++ L+ Y + + VD+ LI LL IC GA+
Sbjct: 592 LEFGNLDESSLVQTNGSDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLYNICHSCDAGAV 651
Query: 628 LVFLPGWDDISKTRERLSI-NPIFKDAS-KFLIISLHSMVPSKEQKKVFKRPPPGCRKII 687
L+FLPG+D+I R+R+ + F D++ ++ + LHS + + +QKKV K PP G RKII
Sbjct: 652 LIFLPGYDEIVGLRDRILFDDKRFADSTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKII 711
Query: 688 LSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVSTFQSSWISKASAKQREGRAGRCQP 747
LSTNIAET+IT++DVV+VIDSG +KEKS+D + V+ + WISKASA QR+GRAGRC+P
Sbjct: 712 LSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGRCRP 771
Query: 748 GICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDP-NCRIEDFLQKTLDPPVFDT 807
GIC+ L+S+ R ++ +FQ PE+ RMP++ELCL KLL P NC I DFL K +PP
Sbjct: 772 GICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCPIADFLMKAPEPPPALI 831
Query: 808 IRNAILVLQDIGALSLDEKLTELGEKLGSLPVHPVTSKMLIFAILMNCLEPALTLACASD 867
+RNA+ +L+ I A+ E LTELG L LPV P KM++ A+++ CL+P LT+AC
Sbjct: 832 VRNAVQMLKTIDAMDTWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLA 891
Query: 868 YKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKNAKRRGQEARFCSKY 927
Y+DPF LP S+++ A + + G SD +A++ AF W+ A+ G E FC K
Sbjct: 892 YRDPFVLPTQASQKRAAMLCRKRFTA--GAFSDHMALLRAFQAWQKARSDGWERAFCEKN 951
Query: 928 HISPSTMSMLFGMRRQLEMELVQNGFIPE----DISTCSLNARDPGILHAVLVAGLYPMV 987
+S +TM ++ GMR QL +L +GF+ DI + N+ + ++ A LVAG+YP +
Sbjct: 952 FLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVKAALVAGMYPNL 1011
Query: 988 GRLLPPQKKGKRAVVETG-SGGRVLLHRQSLNFELSHKLTDNC------------PLIVY 1047
+ + +V TG +V H S+ + +K ++Y
Sbjct: 1012 VHV------DRENLVLTGPKEKKVRFHPASVLSQPQYKKIPPANGQAAAIKALPTDWLIY 1071
Query: 1048 DEITRGDGGTHIRNCTVVGPLPLLMVAKEIAVAPAKENDNGKGDIVNDTYGNDEAGVVET 1095
DE+TR +IR C+ V P+ +L + PA+ N + E
Sbjct: 1072 DEMTRAHRIANIRCCSAVTPVTIL-----VFCGPARLASN---------------ALQEP 1131
BLAST of Carg13121 vs. ExPASy Swiss-Prot
Match:
Q5R746 (3'-5' RNA helicase YTHDC2 OS=Pongo abelii OX=9601 GN=YTHDC2 PE=2 SV=2)
HSP 1 Score: 574.7 bits (1480), Expect = 2.6e-162
Identity = 395/1166 (33.88%), Postives = 601/1166 (51.54%), Query Frame = 0
Query: 28 ALERFCLSNDEVFTFEADLSKRERALVHEECRKMGLTSKSYGRGDQRRVSIYKSKPQKD- 87
ALERF + F + L+ ERA +H + +GL SKS G+G R +++ K +
Sbjct: 52 ALERFRYGDQREMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYLTVKKKDGSETA 111
Query: 88 ----TMKFSEKTKSVLDDLFSSYPPDDGELGRETIGKCKKKTHKQSRKKDDIFWRPLMNK 147
T + TK + L +P + E E + K ++ ++F N+
Sbjct: 112 HAMMTCNLTHNTKHAVRSLIQRFPVTNKE-RTELLPK---------TERGNVFAVEAENR 171
Query: 148 E--EIMKKVESYTTRVKSVANLKKISGDRSKLPIASFQDVITSTVESHQVVLISGETGCG 207
E + ++ + ++ + R LP+ Q+ I ++ ++VVLI GETG G
Sbjct: 172 EMSKTSGRLNNGIPQIPVKRGESEFDSFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSG 231
Query: 208 KTTQVPQFLLDYMWGKGEACKIICTQPRRISATSVSERISYERGENVGSDVGYKIRLESK 267
KTTQ+PQFLLD + G C+I CTQPRR++A +V+ER++ ER E +G +GY+IRLES+
Sbjct: 232 KTTQIPQFLLDDCFKNGIPCRIFCTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESR 291
Query: 268 GGRHSSIVLCTNGILLRVLISEGLGKLTTEASEKSRKNVVSDLTHIIVDEVHERDRYSDF 327
+ + CTNG+LLR L+ + + +S +TH+IVDEVHERDR+SDF
Sbjct: 292 VSPKTLLTFCTNGVLLRTLM--------------AGDSTLSTVTHVIVDEVHERDRFSDF 351
Query: 328 ILAILRDLLPTYPHLRLILMSATIDAERFSKYFGGCPIISVPGFTFPVKNFYLEDVLSIV 387
+L LRDLL +P L+LIL SA +D F +YFG CP+I + G F VK +LED+L
Sbjct: 352 LLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEMFLEDILRTT 411
Query: 388 -------------KSSEENHLDDSTVGASDEE---------------------------- 447
K EE T S +E
Sbjct: 412 GYTNKEMLKYKKEKQQEEKQQTTLTEWYSAQENSFKPGSQRQRTVLNVTDEYDLLDDGGD 471
Query: 448 ---TELTEED--------KLSLDEAIQLAWLN---DEFDPLLELVASEGSSQIFNYQHSV 507
++LTE+D +D + WL+ D F + L+ +E S +Y+HS
Sbjct: 472 AVFSQLTEKDVNCLEPWLVKEMDACLSDIWLHKDIDAFAQVFHLILTENVS--VDYRHSE 531
Query: 508 TGLSPLMVLAGKGRVSDVCMLLSFGAMCELQAKDGMTALEMAERGEHKETAEAIRKHL-- 567
T + LMV AG+G S V L+S GA +A +G AL+ A+ E + + +
Sbjct: 532 TSATALMVAAGRGFASQVEQLISMGANVHSKASNGWMALDWAKHFGQTEIVDLLESYSAS 591
Query: 568 -------ESSMSN------SKEEQRLIGKY-LARNSNSVDVALIDLLLGKICLDSKEGAI 627
ESS+ S E++ L+ Y + + VD+ LI LL IC GA+
Sbjct: 592 LEFGNLDESSLVQTNGSDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLYNICHSCDAGAV 651
Query: 628 LVFLPGWDDISKTRERLSINP--IFKDASKFLIISLHSMVPSKEQKKVFKRPPPGCRKII 687
L+FLPG+D+I R+R+ + + ++ + LHS + + +QKKV K PP G RKII
Sbjct: 652 LIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKII 711
Query: 688 LSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVSTFQSSWISKASAKQREGRAGRCQP 747
LSTNIAET+IT++DVV+VIDSG +KEKS+D + V+ + WISKASA QR+GRAGRC+P
Sbjct: 712 LSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGRCRP 771
Query: 748 GICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDP-NCRIEDFLQKTLDPPVFDT 807
GIC+ L+S+ R ++ +FQ PE+ RMP++ELCL KLL P NC + DFL K +PP
Sbjct: 772 GICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCPVADFLMKAPEPPPALI 831
Query: 808 IRNAILVLQDIGALSLDEKLTELGEKLGSLPVHPVTSKMLIFAILMNCLEPALTLACASD 867
+RNA+ +L+ I A+ E LTELG L LPV P KM++ A+++ CL+P LT+AC
Sbjct: 832 VRNAVQMLKTIDAMDTWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLA 891
Query: 868 YKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKNAKRRGQEARFCSKY 927
Y+DPF LP S+++ A + + G SD +A++ AF W+ A+ G E FC K
Sbjct: 892 YRDPFVLPTQASQKRAAMLCRKRFTA--GAFSDHMALLRAFQAWQKARSDGWERAFCEKN 951
Query: 928 HISPSTMSMLFGMRRQLEMELVQNGFIPE----DISTCSLNARDPGILHAVLVAGLYPMV 987
+S +TM ++ GMR QL +L +GF+ DI + N+ + ++ A LVAG+YP +
Sbjct: 952 FLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVKAALVAGMYPNL 1011
Query: 988 GRLLPPQKKGKRAVVETG-SGGRVLLHRQSLNFELSHKLTDNC------------PLIVY 1047
+ + +V TG +V H S+ + +K ++Y
Sbjct: 1012 VHV------DRENLVLTGPKEKKVRFHPASVLSQPQYKKIPPANGQAAAIKALPTDWLIY 1071
Query: 1048 DEITRGDGGTHIRNCTVVGPLPLLMVAKEIAVAPAKENDNGKGDIVNDTYGNDEAGVVET 1095
DE+TR +IR C+ V P+ +L + PA+ N + E
Sbjct: 1072 DEMTRAHRIANIRCCSAVTPVTIL-----VFCGPARLASN---------------ALQEP 1131
BLAST of Carg13121 vs. ExPASy Swiss-Prot
Match:
B2RR83 (3'-5' RNA helicase YTHDC2 OS=Mus musculus OX=10090 GN=Ythdc2 PE=1 SV=1)
HSP 1 Score: 573.2 bits (1476), Expect = 7.6e-162
Identity = 397/1166 (34.05%), Postives = 603/1166 (51.72%), Query Frame = 0
Query: 28 ALERFCLSNDEVFTFEADLSKRERALVHEECRKMGLTSKSYGRGDQRRVSIYKSKPQKD- 87
ALERF + F + L+ ERA +H + +GL SKS G+G R +++ K +
Sbjct: 67 ALERFRYGDQREMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYLTVKKKDGSETA 126
Query: 88 ----TMKFSEKTKSVLDDLFSSYPPDDGELGRETIGKCKKKTHKQSRKKDDIFWRPLMNK 147
T + TK + L +P + E E + K ++ ++F N+
Sbjct: 127 HAMMTCNLTHNTKHAVRSLIQRFPVTNKE-RTELLPK---------TERGNVFAVEAENR 186
Query: 148 E--EIMKKVESYTTRVKSVANLKKISGDRSKLPIASFQDVITSTVESHQVVLISGETGCG 207
E + ++ + +V + R LP+ Q+ I ++ ++VVLI GETG G
Sbjct: 187 EMSKTSGRLNNGIPQVPVKRGESEFDSFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSG 246
Query: 208 KTTQVPQFLLDYMWGKGEACKIICTQPRRISATSVSERISYERGENVGSDVGYKIRLESK 267
KTTQ+PQFLLD + G C+I CTQPRR++A +V+ER++ ER E +G +GY+IRLES+
Sbjct: 247 KTTQIPQFLLDDCFKNGIPCRIFCTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESR 306
Query: 268 GGRHSSIVLCTNGILLRVLISEGLGKLTTEASEKSRKNVVSDLTHIIVDEVHERDRYSDF 327
+ + CTNG+LLR L+ + + +S +TH+IVDEVHERDR+SDF
Sbjct: 307 VSPKTLLTFCTNGVLLRTLM--------------AGDSTLSTVTHVIVDEVHERDRFSDF 366
Query: 328 ILAILRDLLPTYPHLRLILMSATIDAERFSKYFGGCPIISVPGFTFPVKNFYLEDVL--- 387
+L LRDLL +P L+LIL SA +D F +YFG CP+I + G F VK +LED+L
Sbjct: 367 LLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEMFLEDILRTT 426
Query: 388 -----SIVKSSEENHLDDS------------------------TVGASDEE--------- 447
++K +E ++ V + EE
Sbjct: 427 GYTNKEMLKYKKEKQREEKQQTTLTEWYSAQENTFKPESQRQRAVASVSEEYDLLDDGGD 486
Query: 448 ---TELTEEDK--------LSLDEAIQLAWLN---DEFDPLLELVASEGSSQIFNYQHSV 507
++LTE+D +D + WL+ D F + L+ +E S +Y+HS
Sbjct: 487 AVFSQLTEKDVNCLEPWLIKEMDACLSDIWLHKDVDAFAQVFHLILTENVS--VDYRHSE 546
Query: 508 TGLSPLMVLAGKGRVSDVCMLLSFGAMCELQAKDGMTALEMAERGEHKETAEAIRKHL-- 567
T + LMV AG+G S V L+S GA +A +G AL+ A+ E + + +
Sbjct: 547 TSATALMVAAGRGFTSQVEQLISMGANVHSKASNGWMALDWAKHFGQTEIVDLLESYSAS 606
Query: 568 -------ESSMSN------SKEEQRLIGKY-LARNSNSVDVALIDLLLGKICLDSKEGAI 627
ESS+ S E++ L+ Y + + VD+ LI LL IC GAI
Sbjct: 607 LEFGNLDESSLVQTNGNDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLYNICHSCDAGAI 666
Query: 628 LVFLPGWDDISKTRERLSINP--IFKDASKFLIISLHSMVPSKEQKKVFKRPPPGCRKII 687
L+FLPG+D+I R+R+ + + ++ + LHS + + +QKKV K PP G RKII
Sbjct: 667 LIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKII 726
Query: 688 LSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVSTFQSSWISKASAKQREGRAGRCQP 747
LSTNIAET+IT++DVV+VIDSG +KEKS+D + V+ + WISKASA QR+GRAGRC+P
Sbjct: 727 LSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGRCRP 786
Query: 748 GICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDP-NCRIEDFLQKTLDPPVFDT 807
GIC+ L+S+ R ++ +FQ PE+ RMP++ELCL KLL P NC I DFL K +PP
Sbjct: 787 GICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCTIADFLMKAPEPPPALI 846
Query: 808 IRNAILVLQDIGALSLDEKLTELGEKLGSLPVHPVTSKMLIFAILMNCLEPALTLACASD 867
+RNA+ +L+ I A+ E LTELG L LPV P KM++ A+++ CL+P LT+AC
Sbjct: 847 VRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLA 906
Query: 868 YKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKNAKRRGQEARFCSKY 927
Y+DPF LP S+++ A + + G SD +A++ AF W+ A+ G E FC K
Sbjct: 907 YRDPFVLPTQASQKRAAMLCRKRFTA--GTFSDHMALLRAFQAWQKARSDGWERAFCEKN 966
Query: 928 HISPSTMSMLFGMRRQLEMELVQNGFIPE----DISTCSLNARDPGILHAVLVAGLYPMV 987
+S +TM ++ GMR QL +L +GF+ DI + N+ + ++ A LVAG+YP +
Sbjct: 967 FLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVKAALVAGMYPNL 1026
Query: 988 GRLLPPQKKGKRAVVETG-SGGRVLLHRQSLNFELSHKLTDNC------------PLIVY 1047
+ + V+ TG +V H S+ + +K ++Y
Sbjct: 1027 VHV------DRENVILTGPKEKKVRFHPTSVLSQPQYKKIPPANGQAAAIQALPTDWLIY 1086
Query: 1048 DEITRGDGGTHIRNCTVVGPLPLLMVAKEIAVAPAKENDNGKGDIVNDTYGNDEAGVVET 1095
DE+TR +IR C+ V P+ +L + PA+ N + E
Sbjct: 1087 DEMTRAHRIANIRCCSAVTPVTVL-----VFCGPARLASN---------------ALQEP 1146
BLAST of Carg13121 vs. ExPASy TrEMBL
Match:
A0A6J1FT07 (DExH-box ATP-dependent RNA helicase DExH6 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447032 PE=4 SV=1)
HSP 1 Score: 2506.9 bits (6496), Expect = 0.0e+00
Identity = 1280/1286 (99.53%), Postives = 1282/1286 (99.69%), Query Frame = 0
Query: 1 MAKKKQKKGEQKPKPKAFADADSEITQALERFCLSNDEVFTFEADLSKRERALVHEECRK 60
MAKKKQKKGEQKPKPKAFA ADSEIT+ALERFCLSNDEVFTFEADLSKRERALVHEECRK
Sbjct: 1 MAKKKQKKGEQKPKPKAFAVADSEITRALERFCLSNDEVFTFEADLSKRERALVHEECRK 60
Query: 61 MGLTSKSYGRGDQRRVSIYKSKPQKDTMKFSEKTKSVLDDLFSSYPPDDGELGRETIGKC 120
MGLTSKSYGRGDQRRVSIYKSKPQKDTMKFSEKTKSVLDDLFSSYPPDDGELGRETIGKC
Sbjct: 61 MGLTSKSYGRGDQRRVSIYKSKPQKDTMKFSEKTKSVLDDLFSSYPPDDGELGRETIGKC 120
Query: 121 KKKTHKQSRKKDDIFWRPLMNKEEIMKKVESYTTRVKSVANLKKISGDRSKLPIASFQDV 180
KKKTHKQSRKKDDIFWRP MNKEEIMKKVESYTTRVKSVANLKKISGDRSKLPIASFQDV
Sbjct: 121 KKKTHKQSRKKDDIFWRPSMNKEEIMKKVESYTTRVKSVANLKKISGDRSKLPIASFQDV 180
Query: 181 ITSTVESHQVVLISGETGCGKTTQVPQFLLDYMWGKGEACKIICTQPRRISATSVSERIS 240
ITSTVESHQVVLISGETGCGKTTQVPQFLLDYMWGKGEACKIICTQPRRISATSVSERIS
Sbjct: 181 ITSTVESHQVVLISGETGCGKTTQVPQFLLDYMWGKGEACKIICTQPRRISATSVSERIS 240
Query: 241 YERGENVGSDVGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLTTEASEKSRKNVV 300
YERGENVGSDVGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLTTEASEKSRKNVV
Sbjct: 241 YERGENVGSDVGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLTTEASEKSRKNVV 300
Query: 301 SDLTHIIVDEVHERDRYSDFILAILRDLLPTYPHLRLILMSATIDAERFSKYFGGCPIIS 360
SDLTHIIVDEVHERDRYSDFILAILRDLLPTYPHLRLILMSATIDAERFSKYFGGCPIIS
Sbjct: 301 SDLTHIIVDEVHERDRYSDFILAILRDLLPTYPHLRLILMSATIDAERFSKYFGGCPIIS 360
Query: 361 VPGFTFPVKNFYLEDVLSIVKSSEENHLDDSTVGASDEETELTEEDKLSLDEAIQLAWLN 420
VPGFTFPVKNFYLEDVLSIVKSSEENHLDDSTVGASDEETELTEEDKLSLDEAI LAWLN
Sbjct: 361 VPGFTFPVKNFYLEDVLSIVKSSEENHLDDSTVGASDEETELTEEDKLSLDEAIHLAWLN 420
Query: 421 DEFDPLLELVASEGSSQIFNYQHSVTGLSPLMVLAGKGRVSDVCMLLSFGAMCELQAKDG 480
DEFDPLLELVASEGSSQIFNYQHSVTGLSPLMVLAGKGRVSDVCMLLSFGAMCELQAKDG
Sbjct: 421 DEFDPLLELVASEGSSQIFNYQHSVTGLSPLMVLAGKGRVSDVCMLLSFGAMCELQAKDG 480
Query: 481 MTALEMAERGEHKETAEAIRKHLESSMSNSKEEQRLIGKYLARNSNSVDVALIDLLLGKI 540
MTALEMAERGEHKETAEAIRKHLESSMSNSKEEQRLIGKYLARNSNSVDVALIDLLLGKI
Sbjct: 481 MTALEMAERGEHKETAEAIRKHLESSMSNSKEEQRLIGKYLARNSNSVDVALIDLLLGKI 540
Query: 541 CLDSKEGAILVFLPGWDDISKTRERLSINPIFKDASKFLIISLHSMVPSKEQKKVFKRPP 600
CLDSKEGAILVFLPGWDDISKTRERLSINPIFKDASKFLIISLHSMVPSKEQKKVFKRPP
Sbjct: 541 CLDSKEGAILVFLPGWDDISKTRERLSINPIFKDASKFLIISLHSMVPSKEQKKVFKRPP 600
Query: 601 PGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVSTFQSSWISKASAKQREG 660
PGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVSTFQSSWISKASAKQREG
Sbjct: 601 PGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVSTFQSSWISKASAKQREG 660
Query: 661 RAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDPNCRIEDFLQKTLD 720
RAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDPNCRIEDFLQKTLD
Sbjct: 661 RAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDPNCRIEDFLQKTLD 720
Query: 721 PPVFDTIRNAILVLQDIGALSLDEKLTELGEKLGSLPVHPVTSKMLIFAILMNCLEPALT 780
PPVFDTIRNAILVLQDIGALSLDEKLTELGEKLGSLPVHPVTSKMLIFAILMNCLEPALT
Sbjct: 721 PPVFDTIRNAILVLQDIGALSLDEKLTELGEKLGSLPVHPVTSKMLIFAILMNCLEPALT 780
Query: 781 LACASDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKNAKRRGQEA 840
LACASDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKNAKRRGQEA
Sbjct: 781 LACASDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKNAKRRGQEA 840
Query: 841 RFCSKYHISPSTMSMLFGMRRQLEMELVQNGFIPEDISTCSLNARDPGILHAVLVAGLYP 900
RFCSKYHISPSTMSMLFGMRRQLEMELVQNGFIPEDISTCSLNARDPGILHAVLVAGLYP
Sbjct: 841 RFCSKYHISPSTMSMLFGMRRQLEMELVQNGFIPEDISTCSLNARDPGILHAVLVAGLYP 900
Query: 901 MVGRLLPPQKKGKRAVVETGSGGRVLLHRQSLNFELSHKLTDNCPLIVYDEITRGDGGTH 960
MVGRLLPPQKKGKRAVVETGSGGRVLLHRQSLNFELSHKLTDNCPLIVYDEITRGDGGTH
Sbjct: 901 MVGRLLPPQKKGKRAVVETGSGGRVLLHRQSLNFELSHKLTDNCPLIVYDEITRGDGGTH 960
Query: 961 IRNCTVVGPLPLLMVAKEIAVAPAKENDNGKGDIVNDTYGNDEAGVVETVEDKMDIENKS 1020
IRNCTVVGPLPLLMVAKEIAVAPAKENDNGKGDIVNDTYGNDEAGVVETVEDKMDIENKS
Sbjct: 961 IRNCTVVGPLPLLMVAKEIAVAPAKENDNGKGDIVNDTYGNDEAGVVETVEDKMDIENKS 1020
Query: 1021 NEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVKHPNKILPP 1080
NEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVKHPNKILPP
Sbjct: 1021 NEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVKHPNKILPP 1080
Query: 1081 VLGASMHALACILSYDGLTGISLESVEMLTTMVDATEISNFVPGRSNETHKKVSSFHRSL 1140
VLGASMHALACILSYDGLTGISLESVEMLTTMVDATEISNFVPGRSNETHKKVSSFHRSL
Sbjct: 1081 VLGASMHALACILSYDGLTGISLESVEMLTTMVDATEISNFVPGRSNETHKKVSSFHRSL 1140
Query: 1141 SNYNDFTVPESSGTSNLNHPFSQNFLPPPDFRAANPSDPSSPNFRAFPNSVYARSTLQPH 1200
SNYNDFTVPESSGTSNLNHPFSQNFLPPPDFRAANPSDPSSPNFRAFPNSVYARSTLQPH
Sbjct: 1141 SNYNDFTVPESSGTSNLNHPFSQNFLPPPDFRAANPSDPSSPNFRAFPNSVYARSTLQPH 1200
Query: 1201 REQEHPQPAKPFQDQNATQQQHAPEHKTRKQRKSRRERKAAQQQKHPQLQKPPSGEPSLN 1260
R Q+HPQPAKPFQDQNATQQQHAPEHKTRKQRKSRRERKAAQQQKHPQLQKPPSGEPSLN
Sbjct: 1201 RGQKHPQPAKPFQDQNATQQQHAPEHKTRKQRKSRRERKAAQQQKHPQLQKPPSGEPSLN 1260
Query: 1261 GYGLSTYGPYGLRGISLKRPRGNGAG 1287
GYGLSTYGPYGLRGISLKRPRGNGAG
Sbjct: 1261 GYGLSTYGPYGLRGISLKRPRGNGAG 1286
BLAST of Carg13121 vs. ExPASy TrEMBL
Match:
A0A6J1INX6 (DExH-box ATP-dependent RNA helicase DExH6 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478616 PE=4 SV=1)
HSP 1 Score: 2473.7 bits (6410), Expect = 0.0e+00
Identity = 1259/1286 (97.90%), Postives = 1274/1286 (99.07%), Query Frame = 0
Query: 1 MAKKKQKKGEQKPKPKAFADADSEITQALERFCLSNDEVFTFEADLSKRERALVHEECRK 60
MAKKKQKKGEQKPKPKAFADADSEI QALERFCLSNDEVFTFEADLSKRERALVHEECRK
Sbjct: 1 MAKKKQKKGEQKPKPKAFADADSEIIQALERFCLSNDEVFTFEADLSKRERALVHEECRK 60
Query: 61 MGLTSKSYGRGDQRRVSIYKSKPQKDTMKFSEKTKSVLDDLFSSYPPDDGELGRETIGKC 120
MGLTSKSYGRGDQRRVSIYKSKPQKDTMKFSEKTKSVLDDLFSSYPPDDGELG+ETIGKC
Sbjct: 61 MGLTSKSYGRGDQRRVSIYKSKPQKDTMKFSEKTKSVLDDLFSSYPPDDGELGKETIGKC 120
Query: 121 KKKTHKQSRKKDDIFWRPLMNKEEIMKKVESYTTRVKSVANLKKISGDRSKLPIASFQDV 180
KKK HKQSR+KDDIFWRP MNKEEIMKKVESYTTRVKS+AN+KKISGDRSKLPIASFQDV
Sbjct: 121 KKKAHKQSRRKDDIFWRPSMNKEEIMKKVESYTTRVKSIANMKKISGDRSKLPIASFQDV 180
Query: 181 ITSTVESHQVVLISGETGCGKTTQVPQFLLDYMWGKGEACKIICTQPRRISATSVSERIS 240
ITSTVESHQVVLISGETGCGKTTQVPQFLLDYMWGKGEACKIICTQPRRISATSVSERIS
Sbjct: 181 ITSTVESHQVVLISGETGCGKTTQVPQFLLDYMWGKGEACKIICTQPRRISATSVSERIS 240
Query: 241 YERGENVGSDVGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLTTEASEKSRKNVV 300
YERGENVGSDVGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLT +ASEKSRKNVV
Sbjct: 241 YERGENVGSDVGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLTMDASEKSRKNVV 300
Query: 301 SDLTHIIVDEVHERDRYSDFILAILRDLLPTYPHLRLILMSATIDAERFSKYFGGCPIIS 360
SDLTHIIVDEVHERDR+SDFILAILRDLLPTYPHLRLILMSATIDAERFSKYFGGCPIIS
Sbjct: 301 SDLTHIIVDEVHERDRFSDFILAILRDLLPTYPHLRLILMSATIDAERFSKYFGGCPIIS 360
Query: 361 VPGFTFPVKNFYLEDVLSIVKSSEENHLDDSTVGASDEETELTEEDKLSLDEAIQLAWLN 420
VPGFTFPVKN YLEDVLSIVKSSEENHLDDSTVGASDEETELTEEDKLSLDEAI LAWLN
Sbjct: 361 VPGFTFPVKNLYLEDVLSIVKSSEENHLDDSTVGASDEETELTEEDKLSLDEAIHLAWLN 420
Query: 421 DEFDPLLELVASEGSSQIFNYQHSVTGLSPLMVLAGKGRVSDVCMLLSFGAMCELQAKDG 480
+EFDPLLELVASEGSSQI+NYQHS+TGLSPLMVLAGKGRVSDVCMLLSFGAMCELQAKDG
Sbjct: 421 EEFDPLLELVASEGSSQIYNYQHSLTGLSPLMVLAGKGRVSDVCMLLSFGAMCELQAKDG 480
Query: 481 MTALEMAERGEHKETAEAIRKHLESSMSNSKEEQRLIGKYLARNSNSVDVALIDLLLGKI 540
MTALEMAERGEHKETAEAIRKHLESSMSNSKEEQRLIGKYLA+NSNSVDVALIDLLLGKI
Sbjct: 481 MTALEMAERGEHKETAEAIRKHLESSMSNSKEEQRLIGKYLAKNSNSVDVALIDLLLGKI 540
Query: 541 CLDSKEGAILVFLPGWDDISKTRERLSINPIFKDASKFLIISLHSMVPSKEQKKVFKRPP 600
CLDSKEGAILVFLPGWDDISKTRERLSINPIFKDASKFLIISLHSMVPSKEQKKVFKRPP
Sbjct: 541 CLDSKEGAILVFLPGWDDISKTRERLSINPIFKDASKFLIISLHSMVPSKEQKKVFKRPP 600
Query: 601 PGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVSTFQSSWISKASAKQREG 660
GCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPY NVSTFQSSWISKASAKQREG
Sbjct: 601 SGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYRNVSTFQSSWISKASAKQREG 660
Query: 661 RAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDPNCRIEDFLQKTLD 720
RAGRCQPGICYHLYSK RASSLPDFQVPEIKRMPIEELCLQVKLLDPNCRIEDFLQKTLD
Sbjct: 661 RAGRCQPGICYHLYSKVRASSLPDFQVPEIKRMPIEELCLQVKLLDPNCRIEDFLQKTLD 720
Query: 721 PPVFDTIRNAILVLQDIGALSLDEKLTELGEKLGSLPVHPVTSKMLIFAILMNCLEPALT 780
PPVFDTIRNAILVLQDIGALSLDEKLTELGEKLGSLPVHPVTSKMLIFAILMNCL+PALT
Sbjct: 721 PPVFDTIRNAILVLQDIGALSLDEKLTELGEKLGSLPVHPVTSKMLIFAILMNCLDPALT 780
Query: 781 LACASDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKNAKRRGQEA 840
LACASDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAF+CWKNAKRRGQEA
Sbjct: 781 LACASDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFNCWKNAKRRGQEA 840
Query: 841 RFCSKYHISPSTMSMLFGMRRQLEMELVQNGFIPEDISTCSLNARDPGILHAVLVAGLYP 900
RFCS YHISPSTMSMLFGMRRQLEMELVQNGFIPEDISTCSLNARDPGILHAVLVAGLYP
Sbjct: 841 RFCSNYHISPSTMSMLFGMRRQLEMELVQNGFIPEDISTCSLNARDPGILHAVLVAGLYP 900
Query: 901 MVGRLLPPQKKGKRAVVETGSGGRVLLHRQSLNFELSHKLTDNCPLIVYDEITRGDGGTH 960
MVGRLLPPQKKGKRAVVETGSGGRVLLHRQSLNFELSHKLTDNCPLIVYDEITRGDGGTH
Sbjct: 901 MVGRLLPPQKKGKRAVVETGSGGRVLLHRQSLNFELSHKLTDNCPLIVYDEITRGDGGTH 960
Query: 961 IRNCTVVGPLPLLMVAKEIAVAPAKENDNGKGDIVNDTYGNDEAGVVETVEDKMDIENKS 1020
IRNCTVVGPLPLLMVAKEIAVAPAKENDNGKGDIVNDT GNDEAGVVETVEDKMDIEN+S
Sbjct: 961 IRNCTVVGPLPLLMVAKEIAVAPAKENDNGKGDIVNDTDGNDEAGVVETVEDKMDIENRS 1020
Query: 1021 NEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVKHPNKILPP 1080
NEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVKHPNK+LPP
Sbjct: 1021 NEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVKHPNKVLPP 1080
Query: 1081 VLGASMHALACILSYDGLTGISLESVEMLTTMVDATEISNFVPGRSNETHKKVSSFHRSL 1140
VLGASMHALACILSYDGLTGISLESVEMLTTMVDATEISNFVPGRSNETHKKVSSFHRSL
Sbjct: 1081 VLGASMHALACILSYDGLTGISLESVEMLTTMVDATEISNFVPGRSNETHKKVSSFHRSL 1140
Query: 1141 SNYNDFTVPESSGTSNLNHPFSQNFLPPPDFRAANPSDPSSPNFRAFPNSVYARSTLQPH 1200
SNYNDFTVPESSGTSNLNHPFSQNFLPP DFRAANPSDPSSPNFRAFPNSVYARSTLQPH
Sbjct: 1141 SNYNDFTVPESSGTSNLNHPFSQNFLPPADFRAANPSDPSSPNFRAFPNSVYARSTLQPH 1200
Query: 1201 REQEHPQPAKPFQDQNATQQQHAPEHKTRKQRKSRRERKAAQQQKHPQLQKPPSGEPSLN 1260
REQEHPQPAKPFQDQNATQQQHAPEHKTRKQRKSRRERKAAQQQKHPQLQKPPSG+PSLN
Sbjct: 1201 REQEHPQPAKPFQDQNATQQQHAPEHKTRKQRKSRRERKAAQQQKHPQLQKPPSGDPSLN 1260
Query: 1261 GYGLSTYGPYGLRGISLKRPRGNGAG 1287
GYGLSTYGPYGLRGISLKRPRGNGAG
Sbjct: 1261 GYGLSTYGPYGLRGISLKRPRGNGAG 1286
BLAST of Carg13121 vs. ExPASy TrEMBL
Match:
A0A6J1FLZ8 (DExH-box ATP-dependent RNA helicase DExH6 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111447032 PE=4 SV=1)
HSP 1 Score: 2214.1 bits (5736), Expect = 0.0e+00
Identity = 1128/1132 (99.65%), Postives = 1129/1132 (99.73%), Query Frame = 0
Query: 1 MAKKKQKKGEQKPKPKAFADADSEITQALERFCLSNDEVFTFEADLSKRERALVHEECRK 60
MAKKKQKKGEQKPKPKAFA ADSEIT+ALERFCLSNDEVFTFEADLSKRERALVHEECRK
Sbjct: 1 MAKKKQKKGEQKPKPKAFAVADSEITRALERFCLSNDEVFTFEADLSKRERALVHEECRK 60
Query: 61 MGLTSKSYGRGDQRRVSIYKSKPQKDTMKFSEKTKSVLDDLFSSYPPDDGELGRETIGKC 120
MGLTSKSYGRGDQRRVSIYKSKPQKDTMKFSEKTKSVLDDLFSSYPPDDGELGRETIGKC
Sbjct: 61 MGLTSKSYGRGDQRRVSIYKSKPQKDTMKFSEKTKSVLDDLFSSYPPDDGELGRETIGKC 120
Query: 121 KKKTHKQSRKKDDIFWRPLMNKEEIMKKVESYTTRVKSVANLKKISGDRSKLPIASFQDV 180
KKKTHKQSRKKDDIFWRP MNKEEIMKKVESYTTRVKSVANLKKISGDRSKLPIASFQDV
Sbjct: 121 KKKTHKQSRKKDDIFWRPSMNKEEIMKKVESYTTRVKSVANLKKISGDRSKLPIASFQDV 180
Query: 181 ITSTVESHQVVLISGETGCGKTTQVPQFLLDYMWGKGEACKIICTQPRRISATSVSERIS 240
ITSTVESHQVVLISGETGCGKTTQVPQFLLDYMWGKGEACKIICTQPRRISATSVSERIS
Sbjct: 181 ITSTVESHQVVLISGETGCGKTTQVPQFLLDYMWGKGEACKIICTQPRRISATSVSERIS 240
Query: 241 YERGENVGSDVGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLTTEASEKSRKNVV 300
YERGENVGSDVGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLTTEASEKSRKNVV
Sbjct: 241 YERGENVGSDVGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLTTEASEKSRKNVV 300
Query: 301 SDLTHIIVDEVHERDRYSDFILAILRDLLPTYPHLRLILMSATIDAERFSKYFGGCPIIS 360
SDLTHIIVDEVHERDRYSDFILAILRDLLPTYPHLRLILMSATIDAERFSKYFGGCPIIS
Sbjct: 301 SDLTHIIVDEVHERDRYSDFILAILRDLLPTYPHLRLILMSATIDAERFSKYFGGCPIIS 360
Query: 361 VPGFTFPVKNFYLEDVLSIVKSSEENHLDDSTVGASDEETELTEEDKLSLDEAIQLAWLN 420
VPGFTFPVKNFYLEDVLSIVKSSEENHLDDSTVGASDEETELTEEDKLSLDEAI LAWLN
Sbjct: 361 VPGFTFPVKNFYLEDVLSIVKSSEENHLDDSTVGASDEETELTEEDKLSLDEAIHLAWLN 420
Query: 421 DEFDPLLELVASEGSSQIFNYQHSVTGLSPLMVLAGKGRVSDVCMLLSFGAMCELQAKDG 480
DEFDPLLELVASEGSSQIFNYQHSVTGLSPLMVLAGKGRVSDVCMLLSFGAMCELQAKDG
Sbjct: 421 DEFDPLLELVASEGSSQIFNYQHSVTGLSPLMVLAGKGRVSDVCMLLSFGAMCELQAKDG 480
Query: 481 MTALEMAERGEHKETAEAIRKHLESSMSNSKEEQRLIGKYLARNSNSVDVALIDLLLGKI 540
MTALEMAERGEHKETAEAIRKHLESSMSNSKEEQRLIGKYLARNSNSVDVALIDLLLGKI
Sbjct: 481 MTALEMAERGEHKETAEAIRKHLESSMSNSKEEQRLIGKYLARNSNSVDVALIDLLLGKI 540
Query: 541 CLDSKEGAILVFLPGWDDISKTRERLSINPIFKDASKFLIISLHSMVPSKEQKKVFKRPP 600
CLDSKEGAILVFLPGWDDISKTRERLSINPIFKDASKFLIISLHSMVPSKEQKKVFKRPP
Sbjct: 541 CLDSKEGAILVFLPGWDDISKTRERLSINPIFKDASKFLIISLHSMVPSKEQKKVFKRPP 600
Query: 601 PGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVSTFQSSWISKASAKQREG 660
PGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVSTFQSSWISKASAKQREG
Sbjct: 601 PGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVSTFQSSWISKASAKQREG 660
Query: 661 RAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDPNCRIEDFLQKTLD 720
RAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDPNCRIEDFLQKTLD
Sbjct: 661 RAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDPNCRIEDFLQKTLD 720
Query: 721 PPVFDTIRNAILVLQDIGALSLDEKLTELGEKLGSLPVHPVTSKMLIFAILMNCLEPALT 780
PPVFDTIRNAILVLQDIGALSLDEKLTELGEKLGSLPVHPVTSKMLIFAILMNCLEPALT
Sbjct: 721 PPVFDTIRNAILVLQDIGALSLDEKLTELGEKLGSLPVHPVTSKMLIFAILMNCLEPALT 780
Query: 781 LACASDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKNAKRRGQEA 840
LACASDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKNAKRRGQEA
Sbjct: 781 LACASDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKNAKRRGQEA 840
Query: 841 RFCSKYHISPSTMSMLFGMRRQLEMELVQNGFIPEDISTCSLNARDPGILHAVLVAGLYP 900
RFCSKYHISPSTMSMLFGMRRQLEMELVQNGFIPEDISTCSLNARDPGILHAVLVAGLYP
Sbjct: 841 RFCSKYHISPSTMSMLFGMRRQLEMELVQNGFIPEDISTCSLNARDPGILHAVLVAGLYP 900
Query: 901 MVGRLLPPQKKGKRAVVETGSGGRVLLHRQSLNFELSHKLTDNCPLIVYDEITRGDGGTH 960
MVGRLLPPQKKGKRAVVETGSGGRVLLHRQSLNFELSHKLTDNCPLIVYDEITRGDGGTH
Sbjct: 901 MVGRLLPPQKKGKRAVVETGSGGRVLLHRQSLNFELSHKLTDNCPLIVYDEITRGDGGTH 960
Query: 961 IRNCTVVGPLPLLMVAKEIAVAPAKENDNGKGDIVNDTYGNDEAGVVETVEDKMDIENKS 1020
IRNCTVVGPLPLLMVAKEIAVAPAKENDNGKGDIVNDTYGNDEAGVVETVEDKMDIENKS
Sbjct: 961 IRNCTVVGPLPLLMVAKEIAVAPAKENDNGKGDIVNDTYGNDEAGVVETVEDKMDIENKS 1020
Query: 1021 NEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVKHPNKILPP 1080
NEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVKHPNKILPP
Sbjct: 1021 NEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVKHPNKILPP 1080
Query: 1081 VLGASMHALACILSYDGLTGISLESVEMLTTMVDATEISNFVPGRSNETHKK 1133
VLGASMHALACILSYDGLTGISLESVEMLTTMVDATEISNFVPGRSNETHKK
Sbjct: 1081 VLGASMHALACILSYDGLTGISLESVEMLTTMVDATEISNFVPGRSNETHKK 1132
BLAST of Carg13121 vs. ExPASy TrEMBL
Match:
A0A6J1FPD2 (DExH-box ATP-dependent RNA helicase DExH6 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111447032 PE=4 SV=1)
HSP 1 Score: 2211.8 bits (5730), Expect = 0.0e+00
Identity = 1135/1167 (97.26%), Postives = 1141/1167 (97.77%), Query Frame = 0
Query: 1 MAKKKQKKGEQKPKPKAFADADSEITQALERFCLSNDEVFTFEADLSKRERALVHEECRK 60
MAKKKQKKGEQKPKPKAFA ADSEIT+ALERFCLSNDEVFTFEADLSKRERALVHEECRK
Sbjct: 1 MAKKKQKKGEQKPKPKAFAVADSEITRALERFCLSNDEVFTFEADLSKRERALVHEECRK 60
Query: 61 MGLTSKSYGRGDQRRVSIYKSKPQKDTMKFSEKTKSVLDDLFSSYPPDDGELGRETIGKC 120
MGLTSKSYGRGDQRRVSIYKSKPQKDTMKFSEKTKSVLDDLFSSYPPDDGELGRETIGKC
Sbjct: 61 MGLTSKSYGRGDQRRVSIYKSKPQKDTMKFSEKTKSVLDDLFSSYPPDDGELGRETIGKC 120
Query: 121 KKKTHKQSRKKDDIFWRPLMNKEEIMKKVESYTTRVKSVANLKKISGDRSKLPIASFQDV 180
KKKTHKQSRKKDDIFWRP MNKEEIMKKVESYTTRVKSVANLKKISGDRSKLPIASFQDV
Sbjct: 121 KKKTHKQSRKKDDIFWRPSMNKEEIMKKVESYTTRVKSVANLKKISGDRSKLPIASFQDV 180
Query: 181 ITSTVESHQVVLISGETGCGKTTQVPQFLLDYMWGKGEACKIICTQPRRISATSVSERIS 240
ITSTVESHQVVLISGETGCGKTTQVPQFLLDYMWGKGEACKIICTQPRRISATSVSERIS
Sbjct: 181 ITSTVESHQVVLISGETGCGKTTQVPQFLLDYMWGKGEACKIICTQPRRISATSVSERIS 240
Query: 241 YERGENVGSDVGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLTTEASEKSRKNVV 300
YERGENVGSDVGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLTTEASEKSRKNVV
Sbjct: 241 YERGENVGSDVGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLTTEASEKSRKNVV 300
Query: 301 SDLTHIIVDEVHERDRYSDFILAILRDLLPTYPHLRLILMSATIDAERFSKYFGGCPIIS 360
SDLTHIIVDEVHERDRYSDFILAILRDLLPTYPHLRLILMSATIDAERFSKYFGGCPIIS
Sbjct: 301 SDLTHIIVDEVHERDRYSDFILAILRDLLPTYPHLRLILMSATIDAERFSKYFGGCPIIS 360
Query: 361 VPGFTFPVKNFYLEDVLSIVKSSEENHLDDSTVGASDEETELTEEDKLSLDEAIQLAWLN 420
VPGFTFPVKNFYLEDVLSIVKSSEENHLDDSTVGASDEETELTEEDKLSLDEAI LAWLN
Sbjct: 361 VPGFTFPVKNFYLEDVLSIVKSSEENHLDDSTVGASDEETELTEEDKLSLDEAIHLAWLN 420
Query: 421 DEFDPLLELVASEGSSQIFNYQHSVTGLSPLMVLAGKGRVSDVCMLLSFGAMCELQAKDG 480
DEFDPLLELVASEGSSQIFNYQHSVTGLSPLMVLAGKGRVSDVCMLLSFGAMCELQAKDG
Sbjct: 421 DEFDPLLELVASEGSSQIFNYQHSVTGLSPLMVLAGKGRVSDVCMLLSFGAMCELQAKDG 480
Query: 481 MTALEMAERGEHKETAEAIRKHLESSMSNSKEEQRLIGKYLARNSNSVDVALIDLLLGKI 540
MTALEMAERGEHKETAEAIRKHLESSMSNSKEEQRLIGKYLARNSNSVDVALIDLLLGKI
Sbjct: 481 MTALEMAERGEHKETAEAIRKHLESSMSNSKEEQRLIGKYLARNSNSVDVALIDLLLGKI 540
Query: 541 CLDSKEGAILVFLPGWDDISKTRERLSINPIFKDASKFLIISLHSMVPSKEQKKVFKRPP 600
CLDSKEGAILVFLPGWDDISKTRERLSINPIFKDASKFLIISLHSMVPSKEQKKVFKRPP
Sbjct: 541 CLDSKEGAILVFLPGWDDISKTRERLSINPIFKDASKFLIISLHSMVPSKEQKKVFKRPP 600
Query: 601 PGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVSTFQSSWISKASAKQREG 660
PGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVSTFQSSWISKASAKQREG
Sbjct: 601 PGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVSTFQSSWISKASAKQREG 660
Query: 661 RAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDPNCRIEDFLQKTLD 720
RAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDPNCRIEDFLQKTLD
Sbjct: 661 RAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDPNCRIEDFLQKTLD 720
Query: 721 PPVFDTIRNAILVLQDIGALSLDEKLTELGEKLGSLPVHPVTSKMLIFAILMNCLEPALT 780
PPVFDTIRNAILVLQDIGALSLDEKLTELGEKLGSLPVHPVTSKMLIFAILMNCLEPALT
Sbjct: 721 PPVFDTIRNAILVLQDIGALSLDEKLTELGEKLGSLPVHPVTSKMLIFAILMNCLEPALT 780
Query: 781 LACASDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKNAKRRGQEA 840
LACASDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKNAKRRGQEA
Sbjct: 781 LACASDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKNAKRRGQEA 840
Query: 841 RFCSKYHISPSTMSMLFGMRRQLEMELVQNGFIPEDISTCSLNARDPGILHAVLVAGLYP 900
RFCSKYHISPSTMSMLFGMRRQLEMELVQNGFIPEDISTCSLNARDPGILHAVLVAGLYP
Sbjct: 841 RFCSKYHISPSTMSMLFGMRRQLEMELVQNGFIPEDISTCSLNARDPGILHAVLVAGLYP 900
Query: 901 MVGRLLPPQKKGKRAVVETGSGGRVLLHRQSLNFELSHKLTDNCPLIVYDEITRGDGGTH 960
MVGRLLPPQKKGKRAVVETGSGGRVLLHRQSLNFELSHKLTDNCPLIVYDEITRGDGGTH
Sbjct: 901 MVGRLLPPQKKGKRAVVETGSGGRVLLHRQSLNFELSHKLTDNCPLIVYDEITRGDGGTH 960
Query: 961 IRNCTVVGPLPLLMVAKEIAVAPAKENDNGKGDIVNDTYGNDEAGVVETVEDKMDIENKS 1020
IRNCTVVGPLPLLMVAKEIAVAPAKENDNGKGDIVNDTYGNDEAGVVETVEDKMDIENKS
Sbjct: 961 IRNCTVVGPLPLLMVAKEIAVAPAKENDNGKGDIVNDTYGNDEAGVVETVEDKMDIENKS 1020
Query: 1021 NEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVKHPNKILPP 1080
NEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVKHPNKILPP
Sbjct: 1021 NEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVKHPNKILPP 1080
Query: 1081 VLGASMHALACILSYDGLTGISLESVEMLTTMVDATEISNFVPGRSNETHKKVSSFHRSL 1140
VLGASMHALACILSYDGLTGISLESVEMLTTMVDATEISNFVPGRSNETHKK S +
Sbjct: 1081 VLGASMHALACILSYDGLTGISLESVEMLTTMVDATEISNFVPGRSNETHKK-SMQGQHC 1140
Query: 1141 SNYNDFTVPESSGTSNLNHPFSQNFLP 1168
S+ ++P +PF LP
Sbjct: 1141 SHIEGRSIPSRP------NPFKTKMLP 1160
BLAST of Carg13121 vs. ExPASy TrEMBL
Match:
A0A6J1FT12 (DExH-box ATP-dependent RNA helicase DExH6 isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111447032 PE=4 SV=1)
HSP 1 Score: 2198.3 bits (5695), Expect = 0.0e+00
Identity = 1119/1122 (99.73%), Postives = 1120/1122 (99.82%), Query Frame = 0
Query: 165 ISGDRSKLPIASFQDVITSTVESHQVVLISGETGCGKTTQVPQFLLDYMWGKGEACKIIC 224
ISGDRSKLPIASFQDVITSTVESHQVVLISGETGCGKTTQVPQFLLDYMWGKGEACKIIC
Sbjct: 13 ISGDRSKLPIASFQDVITSTVESHQVVLISGETGCGKTTQVPQFLLDYMWGKGEACKIIC 72
Query: 225 TQPRRISATSVSERISYERGENVGSDVGYKIRLESKGGRHSSIVLCTNGILLRVLISEGL 284
TQPRRISATSVSERISYERGENVGSDVGYKIRLESKGGRHSSIVLCTNGILLRVLISEGL
Sbjct: 73 TQPRRISATSVSERISYERGENVGSDVGYKIRLESKGGRHSSIVLCTNGILLRVLISEGL 132
Query: 285 GKLTTEASEKSRKNVVSDLTHIIVDEVHERDRYSDFILAILRDLLPTYPHLRLILMSATI 344
GKLTTEASEKSRKNVVSDLTHIIVDEVHERDRYSDFILAILRDLLPTYPHLRLILMSATI
Sbjct: 133 GKLTTEASEKSRKNVVSDLTHIIVDEVHERDRYSDFILAILRDLLPTYPHLRLILMSATI 192
Query: 345 DAERFSKYFGGCPIISVPGFTFPVKNFYLEDVLSIVKSSEENHLDDSTVGASDEETELTE 404
DAERFSKYFGGCPIISVPGFTFPVKNFYLEDVLSIVKSSEENHLDDSTVGASDEETELTE
Sbjct: 193 DAERFSKYFGGCPIISVPGFTFPVKNFYLEDVLSIVKSSEENHLDDSTVGASDEETELTE 252
Query: 405 EDKLSLDEAIQLAWLNDEFDPLLELVASEGSSQIFNYQHSVTGLSPLMVLAGKGRVSDVC 464
EDKLSLDEAI LAWLNDEFDPLLELVASEGSSQIFNYQHSVTGLSPLMVLAGKGRVSDVC
Sbjct: 253 EDKLSLDEAIHLAWLNDEFDPLLELVASEGSSQIFNYQHSVTGLSPLMVLAGKGRVSDVC 312
Query: 465 MLLSFGAMCELQAKDGMTALEMAERGEHKETAEAIRKHLESSMSNSKEEQRLIGKYLARN 524
MLLSFGAMCELQAKDGMTALEMAERGEHKETAEAIRKHLESSMSNSKEEQRLIGKYLARN
Sbjct: 313 MLLSFGAMCELQAKDGMTALEMAERGEHKETAEAIRKHLESSMSNSKEEQRLIGKYLARN 372
Query: 525 SNSVDVALIDLLLGKICLDSKEGAILVFLPGWDDISKTRERLSINPIFKDASKFLIISLH 584
SNSVDVALIDLLLGKICLDSKEGAILVFLPGWDDISKTRERLSINPIFKDASKFLIISLH
Sbjct: 373 SNSVDVALIDLLLGKICLDSKEGAILVFLPGWDDISKTRERLSINPIFKDASKFLIISLH 432
Query: 585 SMVPSKEQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVST 644
SMVPSKEQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVST
Sbjct: 433 SMVPSKEQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVST 492
Query: 645 FQSSWISKASAKQREGRAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKL 704
FQSSWISKASAKQREGRAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKL
Sbjct: 493 FQSSWISKASAKQREGRAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKL 552
Query: 705 LDPNCRIEDFLQKTLDPPVFDTIRNAILVLQDIGALSLDEKLTELGEKLGSLPVHPVTSK 764
LDPNCRIEDFLQKTLDPPVFDTIRNAILVLQDIGALSLDEKLTELGEKLGSLPVHPVTSK
Sbjct: 553 LDPNCRIEDFLQKTLDPPVFDTIRNAILVLQDIGALSLDEKLTELGEKLGSLPVHPVTSK 612
Query: 765 MLIFAILMNCLEPALTLACASDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVV 824
MLIFAILMNCLEPALTLACASDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVV
Sbjct: 613 MLIFAILMNCLEPALTLACASDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVV 672
Query: 825 AAFDCWKNAKRRGQEARFCSKYHISPSTMSMLFGMRRQLEMELVQNGFIPEDISTCSLNA 884
AAFDCWKNAKRRGQEARFCSKYHISPSTMSMLFGMRRQLEMELVQNGFIPEDISTCSLNA
Sbjct: 673 AAFDCWKNAKRRGQEARFCSKYHISPSTMSMLFGMRRQLEMELVQNGFIPEDISTCSLNA 732
Query: 885 RDPGILHAVLVAGLYPMVGRLLPPQKKGKRAVVETGSGGRVLLHRQSLNFELSHKLTDNC 944
RDPGILHAVLVAGLYPMVGRLLPPQKKGKRAVVETGSGGRVLLHRQSLNFELSHKLTDNC
Sbjct: 733 RDPGILHAVLVAGLYPMVGRLLPPQKKGKRAVVETGSGGRVLLHRQSLNFELSHKLTDNC 792
Query: 945 PLIVYDEITRGDGGTHIRNCTVVGPLPLLMVAKEIAVAPAKENDNGKGDIVNDTYGNDEA 1004
PLIVYDEITRGDGGTHIRNCTVVGPLPLLMVAKEIAVAPAKENDNGKGDIVNDTYGNDEA
Sbjct: 793 PLIVYDEITRGDGGTHIRNCTVVGPLPLLMVAKEIAVAPAKENDNGKGDIVNDTYGNDEA 852
Query: 1005 GVVETVEDKMDIENKSNEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLS 1064
GVVETVEDKMDIENKSNEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLS
Sbjct: 853 GVVETVEDKMDIENKSNEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLS 912
Query: 1065 AAILFKVKHPNKILPPVLGASMHALACILSYDGLTGISLESVEMLTTMVDATEISNFVPG 1124
AAILFKVKHPNKILPPVLGASMHALACILSYDGLTGISLESVEMLTTMVDATEISNFVPG
Sbjct: 913 AAILFKVKHPNKILPPVLGASMHALACILSYDGLTGISLESVEMLTTMVDATEISNFVPG 972
Query: 1125 RSNETHKKVSSFHRSLSNYNDFTVPESSGTSNLNHPFSQNFLPPPDFRAANPSDPSSPNF 1184
RSNETHKKVSSFHRSLSNYNDFTVPESSGTSNLNHPFSQNFLPPPDFRAANPSDPSSPNF
Sbjct: 973 RSNETHKKVSSFHRSLSNYNDFTVPESSGTSNLNHPFSQNFLPPPDFRAANPSDPSSPNF 1032
Query: 1185 RAFPNSVYARSTLQPHREQEHPQPAKPFQDQNATQQQHAPEHKTRKQRKSRRERKAAQQQ 1244
RAFPNSVYARSTLQPHR Q+HPQPAKPFQDQNATQQQHAPEHKTRKQRKSRRERKAAQQQ
Sbjct: 1033 RAFPNSVYARSTLQPHRGQKHPQPAKPFQDQNATQQQHAPEHKTRKQRKSRRERKAAQQQ 1092
Query: 1245 KHPQLQKPPSGEPSLNGYGLSTYGPYGLRGISLKRPRGNGAG 1287
KHPQLQKPPSGEPSLNGYGLSTYGPYGLRGISLKRPRGNGAG
Sbjct: 1093 KHPQLQKPPSGEPSLNGYGLSTYGPYGLRGISLKRPRGNGAG 1134
BLAST of Carg13121 vs. TAIR 10
Match:
AT2G30800.1 (helicase in vascular tissue and tapetum )
HSP 1 Score: 1308.5 bits (3385), Expect = 0.0e+00
Identity = 715/1261 (56.70%), Postives = 894/1261 (70.90%), Query Frame = 0
Query: 1 MAKKKQKKGEQKPKPKAFADADSEITQALERFCLSNDEVFTFEADLSKRERALVHEECRK 60
M K+ + KP + T+ +E F S +EV+TFE +LS ER ++H+ CRK
Sbjct: 1 MGNKRFRSDNNAGKPTSVEATRIWATKVIEDFRASGNEVYTFEHNLSNNERGVIHQMCRK 60
Query: 61 MGLTSKSYGRGDQRRVSIYKS------------KPQKDTMK---FSEKTKSVLDDLFSSY 120
MG+ SKS GRG+QRR+SI+KS K K+ +K F +L +LF+ Y
Sbjct: 61 MGIQSKSSGRGEQRRLSIFKSRHKNGNKNEANEKSNKEKLKCVSFPPGADVILQELFTHY 120
Query: 121 PPDDGELGRETIGKCKKKTHKQSRKKDDIFWRPLMNKEEIMKKVESYTTRVKSVANLKKI 180
PP DG+ + K KQ + KDD F +P ++ EEI++KV S ++R+K LK+I
Sbjct: 121 PPCDGDTAATSFTKYSGNKGKQGQWKDDFFRKPQISSEEILEKVASLSSRLKKDKALKEI 180
Query: 181 SGDRSKLPIASFQDVITSTVESHQVVLISGETGCGKTTQVPQFLLDYMW-GKGEACKIIC 240
+ RSKLPI SF+D ITS VES+QV+LISGETGCGKTTQVPQ+LLD+MW K E CKI+C
Sbjct: 181 TKLRSKLPITSFKDAITSAVESNQVILISGETGCGKTTQVPQYLLDHMWSSKRETCKIVC 240
Query: 241 TQPRRISATSVSERISYERGENVGSDVGYKIRLESKGGRHSSIVLCTNGILLRVLISEGL 300
TQPRRISA SVSERIS ERGE++G ++GYK+RL+SKGGRHSS+V CTNGILLRVL+ +G
Sbjct: 241 TQPRRISAMSVSERISCERGESIGENIGYKVRLQSKGGRHSSVVFCTNGILLRVLVGKG- 300
Query: 301 GKLTTEASEKSRKNVVSDLTHIIVDEVHERDRYSDFILAILRDLLPTYPHLRLILMSATI 360
+ VSD+THIIVDE+HERD YSDF+LAI+RDLLP+ PHLRLILMSAT+
Sbjct: 301 -----------SVSSVSDITHIIVDEIHERDCYSDFMLAIIRDLLPSNPHLRLILMSATL 360
Query: 361 DAERFSKYFGGCPIISVPGFTFPVKNFYLEDVLSIVKSSEENHLDDSTVGASDEETELTE 420
DAERFS YFGGCP++ VPGFT+PV+ YLEDVLSI+KS +NHL + + SD + +LT+
Sbjct: 361 DAERFSGYFGGCPVVRVPGFTYPVRTLYLEDVLSILKSGGDNHLSSTNLSISDHKLDLTD 420
Query: 421 EDKLSLDEAIQLAWLNDEFDPLLELVASEGSSQIFNYQHSVTGLSPLMVLAGKGRVSDVC 480
EDKL+LDEAI LAW NDEFD LL+LV+S GS +I+NYQH T L+PLMV AGKGR+SDVC
Sbjct: 421 EDKLALDEAIILAWTNDEFDALLDLVSSRGSHEIYNYQHQSTWLTPLMVFAGKGRISDVC 480
Query: 481 MLLSFGAMCELQAKDGMTALEMAERGEHKETAEAIRKHLESSMSNSKEEQRLIGKYLAR- 540
MLLSFGA L++KDGMTALE+AE E A+ IR+H ++S SNS++ Q+L+ KY+A
Sbjct: 481 MLLSFGADWSLKSKDGMTALELAEAENQLEAAQIIREHADNSQSNSQQGQQLLDKYMATI 540
Query: 541 NSNSVDVALIDLLLGKICLDSKEGAILVFLPGWDDISKTRERLSINPIFKDASKFLIISL 600
N VDV+LI L+ KIC DS++GAILVFLPGWDDI+KTR+RL NP F D++KF II L
Sbjct: 541 NPEQVDVSLIQQLMRKICGDSEDGAILVFLPGWDDINKTRQRLLENPFFADSAKFDIICL 600
Query: 601 HSMVPSKEQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVS 660
HSMVP+ EQKKVF RPPPGCRKI+L+TNIAE+A+TIDDVVYVIDSG MKEKSYDPY+NVS
Sbjct: 601 HSMVPAGEQKKVFNRPPPGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNNVS 660
Query: 661 TFQSSWISKASAKQREGRAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVK 720
T QSSW+SKA+AKQR+GRAGRCQPGICYHLYS+ RA+S+PDF+VPEIKRMP+EELCLQVK
Sbjct: 661 TLQSSWVSKANAKQRQGRAGRCQPGICYHLYSRLRAASMPDFKVPEIKRMPVEELCLQVK 720
Query: 721 LLDPNCRIEDFLQKTLDPPVFDTIRNAILVLQDIGALSLDEKLTELGEKLGSLPVHPVTS 780
+LDPNC+ DFLQK LDPPV +I NA+ +LQDIGAL+ E+LTELGEK G LPVHP+ S
Sbjct: 721 ILDPNCKTNDFLQKLLDPPVDQSIANALSILQDIGALTPQEELTELGEKFGHLPVHPLIS 780
Query: 781 KMLIFAILMNCLEPALTLACASDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAV 840
KML FA+L+NCL+PALTLACA+DYK+PFT+PM P ER+KAAAAK ELASL GG SD LAV
Sbjct: 781 KMLFFAVLVNCLDPALTLACAADYKEPFTMPMSPVERQKAAAAKLELASLCGGDSDHLAV 840
Query: 841 VAAFDCWKNAKRRGQEARFCSKYHISPSTMSMLFGMRRQLEMELVQNGFIPEDISTCSLN 900
VAAF+CWKNAK RG A FCS+Y +SPS M ML MR QLE EL ++G IP DIS+CS N
Sbjct: 841 VAAFECWKNAKGRGLSAEFCSQYFVSPSAMKMLDQMRSQLESELKRHGIIPNDISSCSQN 900
Query: 901 ARDPGILHAVLVAGLYPMVGRLLPPQKKGKRAVVETGSGGRVLLHRQSLNFELSHKLTDN 960
+RDPGIL AVL GLYPMVGRL P +R +VET SG +V +H S NF LS K D
Sbjct: 901 SRDPGILRAVLAVGLYPMVGRLCPAFGNNRRTIVETASGAKVRVHSLSNNFNLSSKKYDE 960
Query: 961 CPLIVYDEITRGDGGTHIRNCTVVGPLPLLMVAKEIAVAPAKENDNG-----KGDIVNDT 1020
L+V+DEITRGDGG HIRNCTV LPLL+++ EIAVAP +D+ + D
Sbjct: 961 -SLLVFDEITRGDGGMHIRNCTVARDLPLLLISTEIAVAPTGSSDSDDSNEEEEDDEEVA 1020
Query: 1021 YGNDEAGVVETVEDKMDIENKSNEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYC 1080
+E T E+ MDI + + + +M MSSP+NSV +VVDRWL F + AL++AQ+Y
Sbjct: 1021 ANTNEEVAANTNEEGMDIHKEESRRGAKM-MSSPENSVKLVVDRWLPFRTTALEVAQMYI 1080
Query: 1081 LRERLSAAILFKVKHPNKILPPVLGASMHALACILSYDGLTGISLESVEMLTTMVDATEI 1140
LRERL A+ILFKV HP + LPP LGASMHA+A ILSYDG G+S E + TE+
Sbjct: 1081 LRERLMASILFKVTHPREHLPPHLGASMHAIAGILSYDGHAGLSCPP-ESMVPKHSRTEM 1140
Query: 1141 SNFVPGRSNETHKKVSSFHRSLSNYNDFTVPESSGTSNLNHPFSQNFLPPPDFRAANPSD 1200
+ + +K +SF SL + ++ E+ S+ N N+ P A S
Sbjct: 1141 YD-----TGGWEEKPNSFLNSL--FWSLSLKENKHPSHTNRNQQHNYNMAPTEAA---SI 1200
Query: 1201 PSSPNFRAFPNSVYARSTLQPHREQEHPQPAKPFQDQNATQQQHAPEHKTRKQRKSRRER 1240
P N++ + +E+ P A +HK+ S ++
Sbjct: 1201 PRQQNYKQRNPKATNNTDSGKKKEKMFVNPTNRINQPEAASTGKPSKHKSANSSGSSNKK 1236
BLAST of Carg13121 vs. TAIR 10
Match:
AT1G06670.1 (nuclear DEIH-boxhelicase )
HSP 1 Score: 1200.7 bits (3105), Expect = 0.0e+00
Identity = 643/1152 (55.82%), Postives = 819/1152 (71.09%), Query Frame = 0
Query: 26 TQALERFCLSNDEVFTFEADLSKRERALVHEECRKMGLTSKSYGRGDQRRVSIYK----S 85
T+ LE F S ++ + FE L+ ER ++H+ CR MGL SKS G G++RR+S++K S
Sbjct: 22 TKVLEDFRASGNDSYVFEQQLTNSERGIIHQMCRTMGLRSKSNGSGEERRLSLFKGDGIS 81
Query: 86 KPQKDTM----------------------------------------------KFSEKTK 145
K K M F + K
Sbjct: 82 KSDKRRMYEARNQKEKEGDGISKSYSKHRYETRFQKAGGIRKTRISPKKLKCVSFPPEAK 141
Query: 146 SVLDDLFSSYPPDDGELGRETIGKCKKKTHKQSRKKDDIFWRPLMNKEEIMKKVESYTTR 205
+VL DLF+ YPP DG+ ++G + S KDD F +P M K +I V S ++R
Sbjct: 142 AVLHDLFTRYPPCDGDTTGTSLG-IYTTGNVNSNWKDDFFKKPHMTKHDIENNVVSLSSR 201
Query: 206 VKSVANLKKISGDRSKLPIASFQDVITSTVESHQVVLISGETGCGKTTQVPQFLLDYMW- 265
+K + ++I RSKLPIASF+D I S VES+QVVLI+GETGCGKTTQVPQ+LLD+MW
Sbjct: 202 LKKERHFREIFEARSKLPIASFRDAIISAVESNQVVLIAGETGCGKTTQVPQYLLDHMWH 261
Query: 266 GKGEACKIICTQPRRISATSVSERISYERGENVGSDVGYKIRLESKGGRHSSIVLCTNGI 325
K EACKIICTQPRRISA SVS+RIS+ERGE +G VGYK+RL+S+GGR SS+V CTNGI
Sbjct: 262 SKKEACKIICTQPRRISAISVSDRISWERGETIGRTVGYKVRLQSEGGRESSVVFCTNGI 321
Query: 326 LLRVLISEGLGKLTTEASEKSRKNVVSDLTHIIVDEVHERDRYSDFILAILRDLLPTYPH 385
LLRVLI +G+ + V D+THIIVDE+HERD YSDF+L ILRDLLP+ PH
Sbjct: 322 LLRVLIGKGV------------NSSVPDITHIIVDEIHERDSYSDFMLMILRDLLPSNPH 381
Query: 386 LRLILMSATIDAERFSKYFGGCPIISVPGFTFPVKNFYLEDVLSIVKSSEENHLDDSTVG 445
LRLILMSAT+DAERFS+YFGGCP++ VPGFT+PV+ F+L+D LS++ S + +HL
Sbjct: 382 LRLILMSATLDAERFSEYFGGCPVVRVPGFTYPVRTFFLDDALSVLNSDKNSHL------ 441
Query: 446 ASDEETELTEEDKLSLDEAIQLAWLNDEFDPLLELVASEGSSQIFNYQHSVTGLSPLMVL 505
S + + +EDK+SLDEAI LAW NDEFD L++LV+SEGS + +NYQ+S TGL+PLMV
Sbjct: 442 LSAVKRDFKDEDKVSLDEAIDLAWTNDEFDCLVDLVSSEGSHEAYNYQNSTTGLTPLMVF 501
Query: 506 AGKGRVSDVCMLLSFGAMCELQAKDGMTALEMAERGEHKETAEAIRKHLESSMSNSKEEQ 565
AGKGRVSDVC LLS GA C L++K+G+TALE+AE+ ETA+ IR+H + SNS++ Q
Sbjct: 502 AGKGRVSDVCKLLSVGADCTLKSKEGITALELAEKENQFETAQIIREHAGNIQSNSQQAQ 561
Query: 566 RLIGKYLAR-NSNSVDVALIDLLLGKICLDSKEGAILVFLPGWDDISKTRERLSINPIFK 625
L+ KY+A VDV LI L+ KIC DSK+GAILVFLPGW++ISKT+E+L + F
Sbjct: 562 DLLDKYMATIKPEEVDVGLIVKLMKKICSDSKDGAILVFLPGWEEISKTKEKLLDDRFFA 621
Query: 626 DASKFLIISLHSMVPSKEQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGWMKE 685
++KF+I+ LHS VP++EQKKVF RPP GCRKI+L+TNIAE+A+TIDDVVYVIDSG MKE
Sbjct: 622 HSAKFIILCLHSRVPAEEQKKVFNRPPRGCRKIVLATNIAESAVTIDDVVYVIDSGRMKE 681
Query: 686 KSYDPYSNVSTFQSSWISKASAKQREGRAGRCQPGICYHLYSKFRASSLPDFQVPEIKRM 745
KSYDPY++VST QSSW+SKA+AKQR GRAGRCQ GICYHLYSK RA+SLP+++VPE+ RM
Sbjct: 682 KSYDPYNDVSTLQSSWVSKANAKQRAGRAGRCQAGICYHLYSKLRAASLPEYRVPEVMRM 741
Query: 746 PIEELCLQVKLLDPNCRIEDFLQKTLDPPVFDTIRNAILVLQDIGALSLDEKLTELGEKL 805
P++ELCLQVK+LDPNC + DFLQK +DPPV +I NA+++L+DIGAL+ +E+LTELG+K
Sbjct: 742 PVDELCLQVKMLDPNCNVNDFLQKLMDPPVAQSIENALIILKDIGALTPEEELTELGQKF 801
Query: 806 GSLPVHPVTSKMLIFAILMNCLEPALTLACASDYKDPFTLPMLPSERKKAAAAKAELASL 865
G LPVHP SKM+ FAIL+NCL+PAL LACA+D KDPFT+P+ P +RKKAAAAK ELASL
Sbjct: 802 GQLPVHPRISKMIYFAILVNCLDPALILACAADEKDPFTMPLSPGDRKKAAAAKHELASL 861
Query: 866 YGGHSDQLAVVAAFDCWKNAKRRGQEARFCSKYHISPSTMSMLFGMRRQLEMELVQNGFI 925
YG HSD LA VAAF CWKNAK GQ FCSKY IS M L + R+L+ EL ++G I
Sbjct: 862 YGDHSDHLATVAAFQCWKNAKASGQAKEFCSKYFISQVVMKRLDDLCRKLQGELNRHGVI 921
Query: 926 PEDISTCSLNARDPGILHAVLVAGLYPMVGRLLPPQKKGKRAVVETGSGGRVLLHRQSLN 985
P S CSLNA DPGIL AV+ GLYPM+GR+ P K R+V+ET +G +V + S N
Sbjct: 922 PSSSSNCSLNAHDPGILRAVIAVGLYPMLGRMCPLSKNRTRSVIETIAGAKVRVPSLSNN 981
Query: 986 FELSHKLTDNCPLIVYDEITRGDGGTHIRNCTVVGPLPLLMVAKEIAVAPAKENDNGKGD 1045
++S D LIV+DEITRGD G IR+CTV+ +P+L+ ++EIAV+ + D K D
Sbjct: 982 VDMSSTKFDEA-LIVFDEITRGDWGVVIRSCTVLPTIPVLLFSREIAVSTTESYDAVKSD 1041
Query: 1046 IVNDTYGNDEAGVVETVEDKMDIENKSNEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDI 1105
++E V V D MDI+ K +P E IM P+NSV VVVDRWL F A +I
Sbjct: 1042 -------DEEDHKVGNVGDAMDID-KEVGRPGEKIMLGPENSVKVVVDRWLPFKVTAFEI 1101
Query: 1106 AQLYCLRERLSAAILFKVKHPNKILPPVLGASMHALACILSYDGLTGISLE--SVEMLTT 1124
AQ+Y LRERL A+ILFKVKHP + LPP LGASM+A+A +LSYD L S++ +V+ +T+
Sbjct: 1102 AQMYILRERLMASILFKVKHPKENLPPHLGASMYAIASVLSYDSLAQSSVQTVAVQPITS 1145
BLAST of Carg13121 vs. TAIR 10
Match:
AT2G35920.1 (RNA helicase family protein )
HSP 1 Score: 503.1 bits (1294), Expect = 6.8e-142
Identity = 350/1043 (33.56%), Postives = 531/1043 (50.91%), Query Frame = 0
Query: 22 DSEITQALERFCLSNDEVFTFEADLSKRERALVHEECRKMGLTSKSYGRG---------- 81
++E +E++ ++ + + S+ ++ + + +MGL +Y +G
Sbjct: 64 ENEWWNKIEQWKTGGEQEMLIKRNFSRGDQQTLSDMALQMGLYFHAYNKGKALVVSKVPL 123
Query: 82 -DQRRVSIYKSKPQKDTMKFSEKTKSVLDDLFSSYPPDDGELG--RETIGKCKKKTHKQS 141
D R + + +K S +T+ L L + + G G + +T
Sbjct: 124 PDYRADLDERHGSTQKEIKMSTETERKLGSLLKT-TQESGSSGASASAFNDQQDRTSTLG 183
Query: 142 RKKDDIFWR--PLMNKEEIMKKVESYTTRVKSVANLKKISGDRSKLPIASFQDVITSTVE 201
K+ D + + KE+ ++ ++K+ ++K + R KLP ++ ++V
Sbjct: 184 LKRPDSASKLPDSLEKEKFSFALKERQEKLKATESVKALKAFREKLPAFKMKEEFLNSVS 243
Query: 202 SHQVVLISGETGCGKTTQVPQFLLDYMWG--KGEACKIICTQPRRISATSVSERISYERG 261
+QV+++SGETGCGKTTQ+PQF+L+ +G C IICTQPRRISA SV+ RIS ERG
Sbjct: 244 QNQVLVVSGETGCGKTTQLPQFILEEEISSLRGADCNIICTQPRRISAISVASRISAERG 303
Query: 262 ENVGSDVGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLTTEASEKSRKNVVSDLT 321
E++G VGY+IRLESK + ++ CT G+LLR LI + +++++
Sbjct: 304 ESIGESVGYQIRLESKRSDQTRLLFCTTGVLLRRLIED---------------PNLTNVS 363
Query: 322 HIIVDEVHERDRYSDFILAILRDLLPTYPHLRLILMSATIDAERFSKYFGGCPIISVPGF 381
H++VDE+HER DF+L ILRDLLP P LRLILMSATI+A+ FS YFG P + +PGF
Sbjct: 364 HLLVDEIHERGMNEDFLLIILRDLLPRRPDLRLILMSATINADMFSTYFGNSPTMHIPGF 423
Query: 382 TFPVKNFYLEDVLS----IVKSSEENHLDDSTVGASDEETELTEEDKLSLDEAIQLAWLN 441
TFPV +LEDVL +KSS+ + S+ G E+E ++D +L E I +
Sbjct: 424 TFPVAELFLEDVLEKSRYNIKSSDSGNYQGSSRGRR-RESESKKDDLTTLFEDIDI---- 483
Query: 442 DEFDPLLELVASEGSSQIFNYQHSVTGLSPLMVLAGKGRVSDVCMLLSFGAMCELQAKDG 501
Sbjct: 484 ------------------------------------------------------------ 543
Query: 502 MTALEMAERGEHKETAEAIRKHLESSMSNSKEEQRLIGKYLARNSNSVDVALIDLLLGKI 561
+K + A R LE A + +DV L++ + I
Sbjct: 544 --------NSHYKSYSSATRNSLE-----------------AWSGAQIDVDLVEATIEHI 603
Query: 562 CLDSKEGAILVFLPGWDDISKTRERLSINPIFKDASKFLIISLHSMVPSKEQKKVFKRPP 621
C GAILVFL GWD+ISK E++++N D+SKFL++ LH +P+ Q+++F RPP
Sbjct: 604 CRLEGGGAILVFLTGWDEISKLLEKINMNNFLGDSSKFLVLPLHGSMPTVNQREIFDRPP 663
Query: 622 PGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVSTFQSSWISKASAKQREG 681
P RKI+L+TNIAE++ITIDDVVYV+D G KE SYD + V+ SWISKASA QR G
Sbjct: 664 PNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKVACLLPSWISKASAHQRRG 723
Query: 682 RAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDPNCRIEDFLQKTLD 741
RAGR Q G+CY LY K + P +Q+PEI R P++ELCL +K L I FL K L
Sbjct: 724 RAGRVQAGVCYRLYPKVIYDAFPQYQLPEIIRTPLQELCLHIKSLQVG-SIGSFLAKALQ 783
Query: 742 PPVFDTIRNAILVLQDIGALSLDEKLTELGEKLGSLPVHPVTSKMLIFAILMNCLEPALT 801
PP + NAI +L+ IGAL+ E+LT LG L +LPV P KML+ + C+ PALT
Sbjct: 784 PPDALAVENAIELLKTIGALNDVEELTPLGRHLCTLPVDPNIGKMLLIGAIFQCVNPALT 843
Query: 802 LACASDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKNAKRRGQEA 861
+A A Y+ PF LP+ + +++A AK A SD +A++ A++ +++AKR G E
Sbjct: 844 IAAALAYRSPFVLPL--NRKEEADEAKRYFAG--DSCSDHIALLKAYEGYRDAKRGGNEK 903
Query: 862 RFCSKYHISPSTMSMLFGMRRQLEMELVQNGFIPED-ISTCSLNARDPGILHAVLVAGLY 921
FC + +SP T+ M+ MR Q L GF+ + + + + D ++ AVL AGLY
Sbjct: 904 DFCWQNFLSPVTLRMMEDMRNQFLDLLSDIGFVDKSKPNAYNQYSYDMEMISAVLCAGLY 963
Query: 922 PMVGRLLPPQKKGKRAVVETGSGGRVLLHRQSLNFELSHKLTDNCPLIVYDEITRGDGGT 981
P V + +++GKR T G+V +H S+N ++ + P +VY E +
Sbjct: 964 PNV---VQCKRRGKRTAFYTKELGKVDIHPGSVNARVN---LFSLPYLVYSEKVK-TTSV 988
Query: 982 HIRNCTVVGPLPLLMVAKEIAVAPAKENDNGKGDIVNDTYGNDEAGVVETVEDKMD-IEN 1041
+IR+ T + LLM + + E G ++ + + +++ + ++D + N
Sbjct: 1024 YIRDSTNISDYALLMFGGNLIPSKTGEGIEMLGGYLHFSASKNILELIQRLRGEVDKLLN 988
BLAST of Carg13121 vs. TAIR 10
Match:
AT1G48650.1 (DEA(D/H)-box RNA helicase family protein )
HSP 1 Score: 476.1 bits (1224), Expect = 9.0e-134
Identity = 299/827 (36.15%), Postives = 441/827 (53.33%), Query Frame = 0
Query: 163 KKISGDRSKLPIASFQDVITSTVESHQVVLISGETGCGKTTQVPQFLL--DYMWGKGEAC 222
+K+ G R LP +D + + ++QVV++SGETGCGKTTQ+PQ++L + +G C
Sbjct: 290 QKMVGFRKTLPAYKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAARGATC 349
Query: 223 KIICTQPRRISATSVSERISYERGENVGSDVGYKIRLESKGGRHSSIVLCTNGILLRVLI 282
IICTQPRRISA SVSER++ ERGE +G VGYK+RLE GR + ++ CT G+LLR L+
Sbjct: 350 SIICTQPRRISAISVSERVAAERGEQIGESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLL 409
Query: 283 SEGLGKLTTEASEKSRKNVVSDLTHIIVDEVHERDRYSDFILAILRDLLPTYPHLRLILM 342
++S K V TH++VDE+HER DF+L +L+DLLP P L+LILM
Sbjct: 410 -----------VDRSLKGV----THVVVDEIHERGMNEDFLLIVLKDLLPRRPDLKLILM 469
Query: 343 SATIDAERFSKYFGGCPIISVPGFTFPVKNFYLEDVL--SIVKSSEENHLDDSTVGASDE 402
SAT++AE FS YFGG P + +PGFT+PV+ +LED L S + + N +DD +E
Sbjct: 470 SATLNAELFSSYFGGAPAMHIPGFTYPVRAHFLEDYLETSGYRLTTYNQIDD----YGEE 529
Query: 403 ETELTEEDKLSLDEAIQLAWLNDEFDPLLELVASEGSSQIFNYQHSVTGLSPLMVLAGKG 462
+T ++ +F L++S
Sbjct: 530 KTWKMQKQA--------------QFKKRKSLISS-------------------------- 589
Query: 463 RVSDVCMLLSFGAMCELQAKDGMTALEMAE-RGEHKETAEAIRKHLESSMSNSKEEQRLI 522
V D ALE A+ +G + T +++
Sbjct: 590 AVED--------------------ALEAADFKGYNFRTRDSLS----------------- 649
Query: 523 GKYLARNSNSVDVALIDLLLGKICLDSKEGAILVFLPGWDDISKTRERLSINPIFKDASK 582
+ +S+ LI+ +L I + GA+LVF+ GWDDI+ + +L + + D +K
Sbjct: 650 ----CWSPDSIGFNLIENVLCHIVKGERPGAVLVFMTGWDDINSLKNQLEAHSLLGDPNK 709
Query: 583 FLIISLHSMVPSKEQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYD 642
L+++ H + S EQ+ +F RPP G RKI+L+TN+AET+ITI+DVVYVID G KE SYD
Sbjct: 710 VLLLACHGSMASSEQRLIFDRPPEGIRKIVLATNMAETSITINDVVYVIDCGKAKETSYD 769
Query: 643 PYSNVSTFQSSWISKASAKQREGRAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEE 702
+N SWISKA+A+QR GRAGR PG CYHLY + + D+Q PE+ R P++
Sbjct: 770 ALNNTPCLLPSWISKAAARQRRGRAGRVMPGECYHLYPRCVYEAFADYQQPELLRTPLQS 829
Query: 703 LCLQVKLLDPNCRIEDFLQKTLDPPVFDTIRNAILVLQDIGALSLDEKLTELGEKLGSLP 762
LCLQ+K L I +FL + L PP +++NA+ L+ IGAL DE LT LG+ L LP
Sbjct: 830 LCLQIKSLGLG-SISEFLSRALQPPEALSVQNAVEYLKIIGALDDDENLTPLGKNLSMLP 889
Query: 763 VHPVTSKMLIFAILMNCLEPALTLACASDYKDPFTLPMLPSERKKAAAAKAELASLYGGH 822
V P KMLI + NCL+P +T+ +DPF +P KK A A +
Sbjct: 890 VEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPF----DKKDLAETARSKFSGRDY 949
Query: 823 SDQLAVVAAFDCWKNAKRRGQEARFCSKYHISPSTMSMLFGMRRQLEMELVQNGFIPEDI 882
SD L +V A++ WK+A+R +C K +S T+ + MR+Q L++ + ++I
Sbjct: 950 SDHLTLVRAYNGWKDAERTHSGYDYCWKNFLSSQTLKAMDSMRKQF-FNLLKEASLIDNI 999
Query: 883 STCSLNARDPGILHAVLVAGLYPMVGRLLPPQKKGKRAVVETGSGGRVLLHRQSLNFELS 942
CS + D ++ A++ AG++P V ++ K K ++T G+VLL+ S+N
Sbjct: 1010 EGCSKLSHDEHLVRAIICAGMFPGVCSVV---NKEKSITLKTMEDGQVLLYSSSVN---- 999
Query: 943 HKLTDNCPLIVYDEITRGD----GGTHIRNCTVVGPLPLLMVAKEIA 981
N P+I + + D +R+ T V LL+ +I+
Sbjct: 1070 ----GNVPMIPFPWLVFNDKVKVNSVFLRDSTAVSDSVLLLFGDKIS 999
BLAST of Carg13121 vs. TAIR 10
Match:
AT1G48650.2 (DEA(D/H)-box RNA helicase family protein )
HSP 1 Score: 476.1 bits (1224), Expect = 9.0e-134
Identity = 299/827 (36.15%), Postives = 441/827 (53.33%), Query Frame = 0
Query: 163 KKISGDRSKLPIASFQDVITSTVESHQVVLISGETGCGKTTQVPQFLL--DYMWGKGEAC 222
+K+ G R LP +D + + ++QVV++SGETGCGKTTQ+PQ++L + +G C
Sbjct: 290 QKMVGFRKTLPAYKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAARGATC 349
Query: 223 KIICTQPRRISATSVSERISYERGENVGSDVGYKIRLESKGGRHSSIVLCTNGILLRVLI 282
IICTQPRRISA SVSER++ ERGE +G VGYK+RLE GR + ++ CT G+LLR L+
Sbjct: 350 SIICTQPRRISAISVSERVAAERGEQIGESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLL 409
Query: 283 SEGLGKLTTEASEKSRKNVVSDLTHIIVDEVHERDRYSDFILAILRDLLPTYPHLRLILM 342
++S K V TH++VDE+HER DF+L +L+DLLP P L+LILM
Sbjct: 410 -----------VDRSLKGV----THVVVDEIHERGMNEDFLLIVLKDLLPRRPDLKLILM 469
Query: 343 SATIDAERFSKYFGGCPIISVPGFTFPVKNFYLEDVL--SIVKSSEENHLDDSTVGASDE 402
SAT++AE FS YFGG P + +PGFT+PV+ +LED L S + + N +DD +E
Sbjct: 470 SATLNAELFSSYFGGAPAMHIPGFTYPVRAHFLEDYLETSGYRLTTYNQIDD----YGEE 529
Query: 403 ETELTEEDKLSLDEAIQLAWLNDEFDPLLELVASEGSSQIFNYQHSVTGLSPLMVLAGKG 462
+T ++ +F L++S
Sbjct: 530 KTWKMQKQA--------------QFKKRKSLISS-------------------------- 589
Query: 463 RVSDVCMLLSFGAMCELQAKDGMTALEMAE-RGEHKETAEAIRKHLESSMSNSKEEQRLI 522
V D ALE A+ +G + T +++
Sbjct: 590 AVED--------------------ALEAADFKGYNFRTRDSLS----------------- 649
Query: 523 GKYLARNSNSVDVALIDLLLGKICLDSKEGAILVFLPGWDDISKTRERLSINPIFKDASK 582
+ +S+ LI+ +L I + GA+LVF+ GWDDI+ + +L + + D +K
Sbjct: 650 ----CWSPDSIGFNLIENVLCHIVKGERPGAVLVFMTGWDDINSLKNQLEAHSLLGDPNK 709
Query: 583 FLIISLHSMVPSKEQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYD 642
L+++ H + S EQ+ +F RPP G RKI+L+TN+AET+ITI+DVVYVID G KE SYD
Sbjct: 710 VLLLACHGSMASSEQRLIFDRPPEGIRKIVLATNMAETSITINDVVYVIDCGKAKETSYD 769
Query: 643 PYSNVSTFQSSWISKASAKQREGRAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEE 702
+N SWISKA+A+QR GRAGR PG CYHLY + + D+Q PE+ R P++
Sbjct: 770 ALNNTPCLLPSWISKAAARQRRGRAGRVMPGECYHLYPRCVYEAFADYQQPELLRTPLQS 829
Query: 703 LCLQVKLLDPNCRIEDFLQKTLDPPVFDTIRNAILVLQDIGALSLDEKLTELGEKLGSLP 762
LCLQ+K L I +FL + L PP +++NA+ L+ IGAL DE LT LG+ L LP
Sbjct: 830 LCLQIKSLGLG-SISEFLSRALQPPEALSVQNAVEYLKIIGALDDDENLTPLGKNLSMLP 889
Query: 763 VHPVTSKMLIFAILMNCLEPALTLACASDYKDPFTLPMLPSERKKAAAAKAELASLYGGH 822
V P KMLI + NCL+P +T+ +DPF +P KK A A +
Sbjct: 890 VEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPF----DKKDLAETARSKFSGRDY 949
Query: 823 SDQLAVVAAFDCWKNAKRRGQEARFCSKYHISPSTMSMLFGMRRQLEMELVQNGFIPEDI 882
SD L +V A++ WK+A+R +C K +S T+ + MR+Q L++ + ++I
Sbjct: 950 SDHLTLVRAYNGWKDAERTHSGYDYCWKNFLSSQTLKAMDSMRKQF-FNLLKEASLIDNI 999
Query: 883 STCSLNARDPGILHAVLVAGLYPMVGRLLPPQKKGKRAVVETGSGGRVLLHRQSLNFELS 942
CS + D ++ A++ AG++P V ++ K K ++T G+VLL+ S+N
Sbjct: 1010 EGCSKLSHDEHLVRAIICAGMFPGVCSVV---NKEKSITLKTMEDGQVLLYSSSVN---- 999
Query: 943 HKLTDNCPLIVYDEITRGD----GGTHIRNCTVVGPLPLLMVAKEIA 981
N P+I + + D +R+ T V LL+ +I+
Sbjct: 1070 ----GNVPMIPFPWLVFNDKVKVNSVFLRDSTAVSDSVLLLFGDKIS 999
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7031106.1 | 0.0e+00 | 100.00 | DExH-box ATP-dependent RNA helicase DExH6 [Cucurbita argyrosperma subsp. argyros... | [more] |
KAG6600457.1 | 0.0e+00 | 99.84 | DExH-box ATP-dependent RNA helicase DExH6, partial [Cucurbita argyrosperma subsp... | [more] |
XP_022941757.1 | 0.0e+00 | 99.53 | DExH-box ATP-dependent RNA helicase DExH6 isoform X1 [Cucurbita moschata] >XP_02... | [more] |
XP_023512682.1 | 0.0e+00 | 99.14 | DExH-box ATP-dependent RNA helicase DExH6 isoform X1 [Cucurbita pepo subsp. pepo... | [more] |
XP_022978754.1 | 0.0e+00 | 97.90 | DExH-box ATP-dependent RNA helicase DExH6 isoform X1 [Cucurbita maxima] >XP_0229... | [more] |
Match Name | E-value | Identity | Description | |
F4INY4 | 0.0e+00 | 56.70 | DExH-box ATP-dependent RNA helicase DExH6 OS=Arabidopsis thaliana OX=3702 GN=HVT... | [more] |
F4IDQ6 | 0.0e+00 | 55.82 | DExH-box ATP-dependent RNA helicase DExH2 OS=Arabidopsis thaliana OX=3702 GN=NIH... | [more] |
Q9H6S0 | 8.9e-163 | 34.13 | 3'-5' RNA helicase YTHDC2 OS=Homo sapiens OX=9606 GN=YTHDC2 PE=1 SV=2 | [more] |
Q5R746 | 2.6e-162 | 33.88 | 3'-5' RNA helicase YTHDC2 OS=Pongo abelii OX=9601 GN=YTHDC2 PE=2 SV=2 | [more] |
B2RR83 | 7.6e-162 | 34.05 | 3'-5' RNA helicase YTHDC2 OS=Mus musculus OX=10090 GN=Ythdc2 PE=1 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1FT07 | 0.0e+00 | 99.53 | DExH-box ATP-dependent RNA helicase DExH6 isoform X1 OS=Cucurbita moschata OX=36... | [more] |
A0A6J1INX6 | 0.0e+00 | 97.90 | DExH-box ATP-dependent RNA helicase DExH6 isoform X1 OS=Cucurbita maxima OX=3661... | [more] |
A0A6J1FLZ8 | 0.0e+00 | 99.65 | DExH-box ATP-dependent RNA helicase DExH6 isoform X3 OS=Cucurbita moschata OX=36... | [more] |
A0A6J1FPD2 | 0.0e+00 | 97.26 | DExH-box ATP-dependent RNA helicase DExH6 isoform X2 OS=Cucurbita moschata OX=36... | [more] |
A0A6J1FT12 | 0.0e+00 | 99.73 | DExH-box ATP-dependent RNA helicase DExH6 isoform X4 OS=Cucurbita moschata OX=36... | [more] |