Carg13105 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg13105
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	polyadenylate-binding protein-interacting protein 9-like
Location	Carg_Chr04: 3438485 .. 3442491 (+)
RNA-Seq Expression	Carg13105
Synteny	Carg13105

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAAGAGCGATCCAAATCCGAAGAGGAATAAACCCTACGAGAGTTTGGCGTTAATAGGCGAAACCCAAATCCCAATTCCTATTCTCGATCATTCCATCAAGAGCCCTAGATCACATTCTCTGTTTTTCTTTTAAAAAATCCTTTCTTTTTGCTTCACCTCCTTCCATTTCTGGCCTCTCTCAAATGGGTTCTCTTTATACTTTCTTTTAATGCCAATTGGTGTTTATCCGAGTGGTGGGAATTTACGGATGGACTGAGAGACCTTCTCCACTTCAATTTTGTTTGCTAATTTACTTTGTACTTTGTATATTACATTAACATATACATATATACTTTACATTTCTATTTTCAATTCGGTTTTTTGGCATCTGGGTGTTGATTCAATGGCTGTGGTTGCTGACGATTCCACTGAGGTAGCGGCTGCCAAGAATTTTGATCCGGAGATGAAACCCAAATCAGAATTTGATGCTCATAAGCTTGCTGAAATGTTTAGCAATTTGAACCCTTTGGCTAAGGAGTTCTTTCCTTCCTCTTACTCTCATCATGATCGCCCAGATTTTCAATTTTATTATCACAACTATAATCGATCCTCCATGAAAAACTTTCAGCCCGCCGATCAACTGTTGCACAATGATAACGATCGCAGGGTATTCTTTTATTTTGATCTGCTTTTTTTTTTGTTCTTATTTAGAGCTTGATGTCGAGATTCAATCCGTGATTCTGTTTGATCTGGGATTATTTTTGTTCTTGTTGATTGATTTTGAGTTAATGTGTGTGTGTTTTAATGTGATGAATTTTGCTCCGGGGTGTCTGGATCAAATTCCTGGAAAGGATCATTGTGCTATTCGATTTATTTAATGTCTCTTGACACTGAAAATTATTGAGATGTCTAAATTCAATCCATAGTTTCATTGCCAGAATTGGATTGAATTATACTTTTTGCTTCATCAGGGATTGTTTGTTCTTACTGATTGATTCCAAGTTAATGTATGTATGTTTGTAATGTGGTGAAATTCACTCTTGTGATGGGAATTTTTCCTAATTGAGTAATTGGAATTGTTCACTGTGCTATTGGTATTATTTACCGTTCTTGACTCTGAAAATTATTTTAGCAATCTGTGTGTGTTGATCACTTCCCATGACAACTGAATTGTACTGCAACTTTTAGGAATCATATCATGTAATTGACTGCTATAGTTTTCTATCACATTCAGCTCAGTTCACATCTCCGAACGAGAATTTTATGGTTCGGATTCTTGATAATACTGGCCATTCCTGTTTTGATTTGTCTGATTCACCTTCCAATTATCTATTAAATCACCTCAGATCTGTTTGGTATAATGATAACTCGTCATTATCTGTTTATGTTGCTACAAGTCTTTTATTTTTGCGAATGATATATCGATTCTTACTTCTTTTCCCATAACTTCTAAAGAATTTATCAAGAGATCCATATGCTTTTATGTTACTTTCTGTTTGTTACTGATACACCCTGGTCTACTCGCTTTCCTTGCAAATTTACTTAATGGGGATGTTCTCATTTAATACTTTAGATTCCAACGTCCCGACTGTCTTGAGGTTACTTGGAACGATAAATGTAACTATATTATTATCCGCCTCAATCCTAAGAAATAATCAAAATACATGCTTCATCATATTGTCTTACGTTCTTGTCTCTGCGTTAGACGCTTACCCTGTTTTAGTTTTCTCGTGTCCAGTATTAGGATCTTAAGACCGATAAATTTCACTCAAGGTTTGTGCTGGGCACTTGAACTTGGATTATTAGCCTATCTTCTATACAAGTTACCTCGATTACTTTAGTGTTGTTAAGTACTAAAATAGTATGAAAATGCTTGTCTAGATTGTAGCTCGTTGATAGATCGAACGATAATAACTAGGACAGTTCAGTTTTGTGATTCTCGTACGCTCATTATTGACTGTGTTGAGATTATCTGTGGTTAAATACAAAAGATATAGCCATCTTGGAATGAAACATATGGGTAGCCGCCTGTAACATGCCGAAAATATTCAGTAAAATAAGCCTTGCATCTTAGTTGTGTCTATTCGACTTGATAAAGTTGTGATGCTTTTATAAATTCTTGTCATTGGATAAAATTTCATTTCTTGTACTTGTTCTATGCTATGTTTTTACGCGCTTCCTTCTCGCTTCATTCTTCAGAGAAGAAATGACAATAATAACCAGGGGAGAAGAAGAATGAATAATAGATCTATCAGAGCTCAGCAAGAGGAAAGTGTAATGAGGACTGTTTATGTCTCTGATATTGATAAGGATGTGAGTATCATATCTTTACAAGCCTAGAGTCTTATTATGATGCATTGAGATAATTTTGAAATTAAAATCTTGTTTCTAATCTAGGTCTCTGAAGAGGAGCTTGCCAAGGTATTCAGGGAGTATTGTGGATATGTAAGTATATTCATTCTTCGGGTTCTATCATTTTGTCGGGAGGGTGGAAGTCTAGAGTGAATGTAGTTGATTGATGTTTTTAAACGGGGATGTCGAGGTGGGTTGCCACTGGACTCGATTCTGGCTTTCAACTCGTAACTATCGTCTTATTTGCATTCTTCTTAATGAAAAGACATGGTTTTTTGTTTAATTTATATTGGCCATGGGATGATAGCTATTCTTTTATAGGTTAATGATTGCCGAATTTGTGGCGACCCCCATTCAGTTCTTCGTTTCGCGTTTGTGGAGTTCGCTAATGAACGTAAGTTGATCTTTGCACCTTGAAATTCTTTCCAAGGAGAGATATATAGTTTGATCTTACATGCCACCTGGAATGTTTTGGGAACAGCTAGTGCTAGAGCAGCCACGGGGCTGAGCGGGACGATGGTAGGGTCGTATCCGATTAAGGTATTGCCTTCAAAAACTGCCATTCTTCCTGTGAATCCTACCTTTCTTCCCAAGGTACGGTGTTATCCTTTCTCTTCCTATATGGATATATACATATATGTATACGTATATATATATATTTATGCTCCCTACAAAATGTCTCTTGTGACAGTCAAATGATGAATGGGATATGTGTACCAGGACTATCTACTGCACAAATATAGATAAGAAGGTACTATTACATACTCAAGTGTTTCAAATGGAATGGATCAATGTTGAACTGATGGGGTTTTAAAATCTTTAATCTTGTTTTGTTTTTTTGTTTATAGGTATCTCAGATTGAAGTTAAGAATTTCTTTGAAACATCTTGTGGTGAGGTAAGATATAAACAGACAGCAAATTCGTTTTTTCGACGATTTTAACCGACTGTTATTGACAAGAAAATCTTCCTTTGAATTTAGGTAACTCGCTTGAGGTTGTTGGGTGATCAGTTGCATTCGACCCGTATTGCGTTTGTCGAGTTTGCTATGGTAATCTTTTTCTGTAACGCATTACACTAAGTTCGTCTCGTCTTATGCTAGTTTTTATTGACAAAGAAGCTCAGTATGAACCTTAGAACATTACATAAAGTTCTTCACTTTGTTGAGATCAATCTCTTTAGCTCTGTTTGTTTCCATGAGCAGGCAGAGACTGCTCTCCAAGCCCTCAACTGCAGTGGCATGATCTTGGGTACTCAGCCAATCAGGTATGGTTTCTTTACTGCTAACACCCTCTCACTTTCCCTACATTAGTTCAGATACATATTTTTTTGTGAAACTTTGTAGGGTAAGTCCTTCGAAGACGCCTGTTAGGCCACGAGTTACTCGCCCGGGAAGCATTAAGCCATCGTAGTAGAAGGCAAATATTCTCCAATATCAGTGTTGAGAAGTTGGCTAGTTTCTTGGCTGAACTTGTTTATAACTCTTCTTCAATTATAGTTCATTTGGCTGAGTTCCAATCTTTGACAATTATTTCCCTCCCCGACAAGTTCTGTCTTAGTTTTTTCTTTCGATCGCTACTAGTTAATGTTAATGTTGTTGGAGTTGTTACTATGTTATGCATTACTTTCATCTCTTGAGTTTTATGTTGCTTGAACATAGACGTATCAATCAAGAGA

mRNA sequence

TTAAGAGCGATCCAAATCCGAAGAGGAATAAACCCTACGAGAGTTTGGCGTTAATAGGCGAAACCCAAATCCCAATTCCTATTCTCGATCATTCCATCAAGAGCCCTAGATCACATTCTCTGTTTTTCTTTTAAAAAATCCTTTCTTTTTGCTTCACCTCCTTCCATTTCTGGCCTCTCTCAAATGGGTTCTCTTTATACTTTCTTTTAATGCCAATTGGTGTTTATCCGAGTGGTGGGAATTTACGGATGGACTGAGAGACCTTCTCCACTTCAATTTTGTTTGCTAATTTACTTTGTACTTTGTATATTACATTAACATATACATATATACTTTACATTTCTATTTTCAATTCGGTTTTTTGGCATCTGGGTGTTGATTCAATGGCTGTGGTTGCTGACGATTCCACTGAGGTAGCGGCTGCCAAGAATTTTGATCCGGAGATGAAACCCAAATCAGAATTTGATGCTCATAAGCTTGCTGAAATGTTTAGCAATTTGAACCCTTTGGCTAAGGAGTTCTTTCCTTCCTCTTACTCTCATCATGATCGCCCAGATTTTCAATTTTATTATCACAACTATAATCGATCCTCCATGAAAAACTTTCAGCCCGCCGATCAACTGTTGCACAATGATAACGATCGCAGGAGAAGAAATGACAATAATAACCAGGGGAGAAGAAGAATGAATAATAGATCTATCAGAGCTCAGCAAGAGGAAAGTGTAATGAGGACTGTTTATGTCTCTGATATTGATAAGGATGTCTCTGAAGAGGAGCTTGCCAAGGTTAATGATTGCCGAATTTGTGGCGACCCCCATTCAGTTCTTCGTTTCGCGTTTGTGGAGTTCGCTAATGAACCTAGTGCTAGAGCAGCCACGGGGCTGAGCGGGACGATGGTAGGGTCGTATCCGATTAAGGTATTGCCTTCAAAAACTGCCATTCTTCCTGTGAATCCTACCTTTCTTCCCAAGTCAAATGATGAATGGGATATGTGTACCAGGACTATCTACTGCACAAATATAGATAAGAAGGTATCTCAGATTGAAGTTAAGAATTTCTTTGAAACATCTTGTGGTGAGGTAACTCGCTTGAGGTTGTTGGGTGATCAGTTGCATTCGACCCGTATTGCGTTTGTCGAGTTTGCTATGGCAGAGACTGCTCTCCAAGCCCTCAACTGCAGTGGCATGATCTTGGGTACTCAGCCAATCAGGGTAAGTCCTTCGAAGACGCCTGTTAGGCCACGAGTTACTCGCCCGGGAAGCATTAAGCCATCGTAGTAGAAGGCAAATATTCTCCAATATCAGTGTTGAGAAGTTGGCTAGTTTCTTGGCTGAACTTGTTTATAACTCTTCTTCAATTATAGTTCATTTGGCTGAGTTCCAATCTTTGACAATTATTTCCCTCCCCGACAAGTTCTGTCTTAGTTTTTTCTTTCGATCGCTACTAGTTAATGTTAATGTTGTTGGAGTTGTTACTATGTTATGCATTACTTTCATCTCTTGAGTTTTATGTTGCTTGAACATAGACGTATCAATCAAGAGA

Coding sequence (CDS)

ATGGCTGTGGTTGCTGACGATTCCACTGAGGTAGCGGCTGCCAAGAATTTTGATCCGGAGATGAAACCCAAATCAGAATTTGATGCTCATAAGCTTGCTGAAATGTTTAGCAATTTGAACCCTTTGGCTAAGGAGTTCTTTCCTTCCTCTTACTCTCATCATGATCGCCCAGATTTTCAATTTTATTATCACAACTATAATCGATCCTCCATGAAAAACTTTCAGCCCGCCGATCAACTGTTGCACAATGATAACGATCGCAGGAGAAGAAATGACAATAATAACCAGGGGAGAAGAAGAATGAATAATAGATCTATCAGAGCTCAGCAAGAGGAAAGTGTAATGAGGACTGTTTATGTCTCTGATATTGATAAGGATGTCTCTGAAGAGGAGCTTGCCAAGGTTAATGATTGCCGAATTTGTGGCGACCCCCATTCAGTTCTTCGTTTCGCGTTTGTGGAGTTCGCTAATGAACCTAGTGCTAGAGCAGCCACGGGGCTGAGCGGGACGATGGTAGGGTCGTATCCGATTAAGGTATTGCCTTCAAAAACTGCCATTCTTCCTGTGAATCCTACCTTTCTTCCCAAGTCAAATGATGAATGGGATATGTGTACCAGGACTATCTACTGCACAAATATAGATAAGAAGGTATCTCAGATTGAAGTTAAGAATTTCTTTGAAACATCTTGTGGTGAGGTAACTCGCTTGAGGTTGTTGGGTGATCAGTTGCATTCGACCCGTATTGCGTTTGTCGAGTTTGCTATGGCAGAGACTGCTCTCCAAGCCCTCAACTGCAGTGGCATGATCTTGGGTACTCAGCCAATCAGGGTAAGTCCTTCGAAGACGCCTGTTAGGCCACGAGTTACTCGCCCGGGAAGCATTAAGCCATCGTAG

Protein sequence

MAVVADDSTEVAAAKNFDPEMKPKSEFDAHKLAEMFSNLNPLAKEFFPSSYSHHDRPDFQFYYHNYNRSSMKNFQPADQLLHNDNDRRRRNDNNNQGRRRMNNRSIRAQQEESVMRTVYVSDIDKDVSEEELAKVNDCRICGDPHSVLRFAFVEFANEPSARAATGLSGTMVGSYPIKVLPSKTAILPVNPTFLPKSNDEWDMCTRTIYCTNIDKKVSQIEVKNFFETSCGEVTRLRLLGDQLHSTRIAFVEFAMAETALQALNCSGMILGTQPIRVSPSKTPVRPRVTRPGSIKPS

Homology

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BLAST of Carg13105 vs. NCBI nr
Match: KAG7031122.1 (Polyadenylate-binding protein-interacting protein 9 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 583.2 bits (1502), Expect = 1.3e-162
Identity = 297/297 (100.00%), Postives = 297/297 (100.00%), Query Frame = 0


Query: 1   MAVVADDSTEVAAAKNFDPEMKPKSEFDAHKLAEMFSNLNPLAKEFFPSSYSHHDRPDFQ 60
           MAVVADDSTEVAAAKNFDPEMKPKSEFDAHKLAEMFSNLNPLAKEFFPSSYSHHDRPDFQ
Sbjct: 1   MAVVADDSTEVAAAKNFDPEMKPKSEFDAHKLAEMFSNLNPLAKEFFPSSYSHHDRPDFQ 60

Query: 61  FYYHNYNRSSMKNFQPADQLLHNDNDRRRRNDNNNQGRRRMNNRSIRAQQEESVMRTVYV 120
           FYYHNYNRSSMKNFQPADQLLHNDNDRRRRNDNNNQGRRRMNNRSIRAQQEESVMRTVYV
Sbjct: 61  FYYHNYNRSSMKNFQPADQLLHNDNDRRRRNDNNNQGRRRMNNRSIRAQQEESVMRTVYV 120

Query: 121 SDIDKDVSEEELAKVNDCRICGDPHSVLRFAFVEFANEPSARAATGLSGTMVGSYPIKVL 180
           SDIDKDVSEEELAKVNDCRICGDPHSVLRFAFVEFANEPSARAATGLSGTMVGSYPIKVL
Sbjct: 121 SDIDKDVSEEELAKVNDCRICGDPHSVLRFAFVEFANEPSARAATGLSGTMVGSYPIKVL 180

Query: 181 PSKTAILPVNPTFLPKSNDEWDMCTRTIYCTNIDKKVSQIEVKNFFETSCGEVTRLRLLG 240
           PSKTAILPVNPTFLPKSNDEWDMCTRTIYCTNIDKKVSQIEVKNFFETSCGEVTRLRLLG
Sbjct: 181 PSKTAILPVNPTFLPKSNDEWDMCTRTIYCTNIDKKVSQIEVKNFFETSCGEVTRLRLLG 240

Query: 241 DQLHSTRIAFVEFAMAETALQALNCSGMILGTQPIRVSPSKTPVRPRVTRPGSIKPS 298
           DQLHSTRIAFVEFAMAETALQALNCSGMILGTQPIRVSPSKTPVRPRVTRPGSIKPS
Sbjct: 241 DQLHSTRIAFVEFAMAETALQALNCSGMILGTQPIRVSPSKTPVRPRVTRPGSIKPS 297

[Close]

BLAST of Carg13105 vs. NCBI nr
Match: XP_022942237.1 (polyadenylate-binding protein-interacting protein 9-like [Cucurbita moschata] >XP_022942238.1 polyadenylate-binding protein-interacting protein 9-like [Cucurbita moschata] >KAG6600479.1 Polyadenylate-binding protein-interacting protein 9, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 575.9 bits (1483), Expect = 2.1e-160
Identity = 297/305 (97.38%), Postives = 297/305 (97.38%), Query Frame = 0


Query: 1   MAVVADDSTEVAAAKNFDPEMKPKSEFDAHKLAEMFSNLNPLAKEFFPSSYSHHDRPDFQ 60
           MAVVADDSTEVAAAKNFDPEMKPKSEFDAHKLAEMFSNLNPLAKEFFPSSYSHHDRPDFQ
Sbjct: 1   MAVVADDSTEVAAAKNFDPEMKPKSEFDAHKLAEMFSNLNPLAKEFFPSSYSHHDRPDFQ 60

Query: 61  FYYHNYNRSSMKNFQPADQLLHNDNDRRRRNDNNNQGRRRMNNRSIRAQQEESVMRTVYV 120
           FYYHNYNRSSMKNFQPADQLLHNDNDRRRRNDNNNQGRRRMNNRSIRAQQEESVMRTVYV
Sbjct: 61  FYYHNYNRSSMKNFQPADQLLHNDNDRRRRNDNNNQGRRRMNNRSIRAQQEESVMRTVYV 120

Query: 121 SDIDKDVSEEELAK--------VNDCRICGDPHSVLRFAFVEFANEPSARAATGLSGTMV 180
           SDIDKDVSEEELAK        VNDCRICGDPHSVLRFAFVEFANEPSARAATGLSGTMV
Sbjct: 121 SDIDKDVSEEELAKVFREYCGYVNDCRICGDPHSVLRFAFVEFANEPSARAATGLSGTMV 180

Query: 181 GSYPIKVLPSKTAILPVNPTFLPKSNDEWDMCTRTIYCTNIDKKVSQIEVKNFFETSCGE 240
           GSYPIKVLPSKTAILPVNPTFLPKSNDEWDMCTRTIYCTNIDKKVSQIEVKNFFETSCGE
Sbjct: 181 GSYPIKVLPSKTAILPVNPTFLPKSNDEWDMCTRTIYCTNIDKKVSQIEVKNFFETSCGE 240

Query: 241 VTRLRLLGDQLHSTRIAFVEFAMAETALQALNCSGMILGTQPIRVSPSKTPVRPRVTRPG 298
           VTRLRLLGDQLHSTRIAFVEFAMAETALQALNCSGMILGTQPIRVSPSKTPVRPRVTRPG
Sbjct: 241 VTRLRLLGDQLHSTRIAFVEFAMAETALQALNCSGMILGTQPIRVSPSKTPVRPRVTRPG 300

[Close]

BLAST of Carg13105 vs. NCBI nr
Match: XP_023531181.1 (polyadenylate-binding protein-interacting protein 9-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 573.9 bits (1478), Expect = 7.8e-160
Identity = 295/305 (96.72%), Postives = 297/305 (97.38%), Query Frame = 0


Query: 1   MAVVADDSTEVAAAKNFDPEMKPKSEFDAHKLAEMFSNLNPLAKEFFPSSYSHHDRPDFQ 60
           MAVVA+DSTEVAAAKNFDPEMKPKSEFDAHKLAEMFSNLNPLAKEFFPSSYSHHDRPDFQ
Sbjct: 1   MAVVAEDSTEVAAAKNFDPEMKPKSEFDAHKLAEMFSNLNPLAKEFFPSSYSHHDRPDFQ 60

Query: 61  FYYHNYNRSSMKNFQPADQLLHNDNDRRRRNDNNNQGRRRMNNRSIRAQQEESVMRTVYV 120
           FYYHNYNRSSMKNFQPADQLLHNDNDRRRRNDNNNQGRRRMNNRSIRAQQEESVMRTVYV
Sbjct: 61  FYYHNYNRSSMKNFQPADQLLHNDNDRRRRNDNNNQGRRRMNNRSIRAQQEESVMRTVYV 120

Query: 121 SDIDKDVSEEELAK--------VNDCRICGDPHSVLRFAFVEFANEPSARAATGLSGTMV 180
           SDIDKDVSEEELAK        VNDCRICGDPHSVLRFAFVEFANEPSARAATGLSGTMV
Sbjct: 121 SDIDKDVSEEELAKVFREYCGYVNDCRICGDPHSVLRFAFVEFANEPSARAATGLSGTMV 180

Query: 181 GSYPIKVLPSKTAILPVNPTFLPKSNDEWDMCTRTIYCTNIDKKVSQIEVKNFFETSCGE 240
           GSYPIKVLPSKTAILPVNPTFLPKSNDEWDMCTRTIYCTNIDKKVSQ+EVKNFFETSCGE
Sbjct: 181 GSYPIKVLPSKTAILPVNPTFLPKSNDEWDMCTRTIYCTNIDKKVSQVEVKNFFETSCGE 240

Query: 241 VTRLRLLGDQLHSTRIAFVEFAMAETALQALNCSGMILGTQPIRVSPSKTPVRPRVTRPG 298
           VTRLRLLGDQLHSTRIAFVEFAMAETALQALNCSGMILGTQPIRVSPSKTPVRPRVTRPG
Sbjct: 241 VTRLRLLGDQLHSTRIAFVEFAMAETALQALNCSGMILGTQPIRVSPSKTPVRPRVTRPG 300

[Close]

BLAST of Carg13105 vs. NCBI nr
Match: XP_022982064.1 (polyadenylate-binding protein-interacting protein 9-like [Cucurbita maxima])

HSP 1 Score: 568.5 bits (1464), Expect = 3.3e-158
Identity = 294/305 (96.39%), Postives = 296/305 (97.05%), Query Frame = 0


Query: 1   MAVVADDSTEVAAAKNFDPEMKPKSEFDAHKLAEMFSNLNPLAKEFFPSSYSHHDRPDFQ 60
           MAVVA+DS+EVAAAKNFDPEMKPKSEFDA KLAEMFSNLNPLAKEFFPSSYSHHDRPDFQ
Sbjct: 1   MAVVAEDSSEVAAAKNFDPEMKPKSEFDALKLAEMFSNLNPLAKEFFPSSYSHHDRPDFQ 60

Query: 61  FYYHNYNRSSMKNFQPADQLLHNDNDRRRRNDNNNQGRRRMNNRSIRAQQEESVMRTVYV 120
           FYYHNYNRSSMKNFQPADQLLHNDNDRRRRNDNNNQGRRRMNNRSIRAQQEESVMRTVYV
Sbjct: 61  FYYHNYNRSSMKNFQPADQLLHNDNDRRRRNDNNNQGRRRMNNRSIRAQQEESVMRTVYV 120

Query: 121 SDIDKDVSEEELAK--------VNDCRICGDPHSVLRFAFVEFANEPSARAATGLSGTMV 180
           SDIDKDVSEEELAK        VNDCRICGDPHSVLRFAFVEFANEPSARAATGLSGTMV
Sbjct: 121 SDIDKDVSEEELAKVFREYCGYVNDCRICGDPHSVLRFAFVEFANEPSARAATGLSGTMV 180

Query: 181 GSYPIKVLPSKTAILPVNPTFLPKSNDEWDMCTRTIYCTNIDKKVSQIEVKNFFETSCGE 240
           GSYPIKVLPSKTAILPVNPTFLPKSNDEWDMCTRTIYCTNIDKKVSQIEVKNFFETSCGE
Sbjct: 181 GSYPIKVLPSKTAILPVNPTFLPKSNDEWDMCTRTIYCTNIDKKVSQIEVKNFFETSCGE 240

Query: 241 VTRLRLLGDQLHSTRIAFVEFAMAETALQALNCSGMILGTQPIRVSPSKTPVRPRVTRPG 298
           VTRLRLLGDQLHSTRIAFVEFAMAETALQALNCSGMILGTQPIRVSPSKTPVRPRVTRPG
Sbjct: 241 VTRLRLLGDQLHSTRIAFVEFAMAETALQALNCSGMILGTQPIRVSPSKTPVRPRVTRPG 300

[Close]

BLAST of Carg13105 vs. NCBI nr
Match: XP_022142940.1 (polyadenylate-binding protein-interacting protein 9 [Momordica charantia])

HSP 1 Score: 509.6 bits (1311), Expect = 1.8e-140
Identity = 265/305 (86.89%), Postives = 277/305 (90.82%), Query Frame = 0


Query: 1   MAVVADDSTEVAAAKNFDPEMKPKSEFDAHKLAEMFSNLNPLAKEFFPSSYSHHDRPDFQ 60
           MA VA+D  E AAAKNFDP MKPKSEFDAHKLAEMFSNLNPLAKEFFPSSYSHHDR +FQ
Sbjct: 1   MAAVAEDIGEAAAAKNFDPNMKPKSEFDAHKLAEMFSNLNPLAKEFFPSSYSHHDRQEFQ 60

Query: 61  FYYHNYNRSSMKNFQPADQLLHNDNDRRRRNDNNNQGRRRMNNRSIRAQQEESVMRTVYV 120
           FYY N NRSS KNFQ ADQLLH+DN+RRRR D NNQGRRR+N+RS+RAQQEES+ RTVYV
Sbjct: 61  FYYQNNNRSSTKNFQVADQLLHSDNNRRRRQDFNNQGRRRLNSRSVRAQQEESIRRTVYV 120

Query: 121 SDIDKDVSEEELAK--------VNDCRICGDPHSVLRFAFVEFANEPSARAATGLSGTMV 180
           SDIDKDVSEEELAK        VNDCRICGDPHSVLRFAFVEFANE SARAA  L GTMV
Sbjct: 121 SDIDKDVSEEELAKVFREFCGYVNDCRICGDPHSVLRFAFVEFANEHSARAALNLGGTMV 180

Query: 181 GSYPIKVLPSKTAILPVNPTFLPKSNDEWDMCTRTIYCTNIDKKVSQIEVKNFFETSCGE 240
           GSYPIKVLPSKTAILPVNPTFLPKSNDEWDMCTRTIYCTNIDKKVSQ EVK+FFETSCGE
Sbjct: 181 GSYPIKVLPSKTAILPVNPTFLPKSNDEWDMCTRTIYCTNIDKKVSQAEVKSFFETSCGE 240

Query: 241 VTRLRLLGDQLHSTRIAFVEFAMAETALQALNCSGMILGTQPIRVSPSKTPVRPRVTRPG 298
           VTRLRLLGDQLHSTRIAFVEFA+AETALQALNCSGMILG+QPIRVSPSKTPVRPRVTRPG
Sbjct: 241 VTRLRLLGDQLHSTRIAFVEFALAETALQALNCSGMILGSQPIRVSPSKTPVRPRVTRPG 300

[Close]

BLAST of Carg13105 vs. ExPASy Swiss-Prot
Match: Q9LRR6 (Polyadenylate-binding protein-interacting protein 9 OS=Arabidopsis thaliana OX=3702 GN=CID9 PE=4 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 9.8e-89
Identity = 188/325 (57.85%), Postives = 222/325 (68.31%), Query Frame = 0


Query: 3   VVADDSTEVAAAKN------------FDPEMKPKSEFDAHKLAEMFSNLNPLAKEFFPSS 62
           VV DD  EV+                 D + + +S  D HKL  MF  LNPLAKEFFPS 
Sbjct: 12  VVVDDVKEVSTKSEKIIDEGIEKSSITDSKTETESRLDMHKLVAMFKKLNPLAKEFFPSY 71

Query: 63  YSHHDRPDFQFYYHNYNRSSMKNFQPADQL---------------LHNDNDRRRRNDNNN 122
           Y             N   +    F PAD                   +DN R+RR  N +
Sbjct: 72  YDPK---------KNNQVAKANQFLPADDFETTKKQSGEEFDLDAKKDDNTRKRR--NYS 131

Query: 123 QGRRRMNNRSIRAQQEESVMRTVYVSDIDKDVSEEELA-------KVNDCRICGDPHSVL 182
           QGRRR+  R  +AQ+E+S+ RTVYVSDID+ V+EE LA       +V DCRICGDPHSVL
Sbjct: 132 QGRRRLTGRISKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSNCGQVVDCRICGDPHSVL 191

Query: 183 RFAFVEFANEPSARAATGLSGTMVGSYPIKVLPSKTAILPVNPTFLPKSNDEWDMCTRTI 242
           RFAFVEFA++  A  A  L GTM+G YP++VLPSKTAILPVNPTFLP+S DE +MCTRTI
Sbjct: 192 RFAFVEFADDQGAHEALSLGGTMLGFYPVRVLPSKTAILPVNPTFLPRSEDEREMCTRTI 251

Query: 243 YCTNIDKKVSQIEVKNFFETSCGEVTRLRLLGDQLHSTRIAFVEFAMAETALQALNCSGM 294
           YCTNIDKKVSQ +V+NFFE++CGEVTRLRLLGDQLHSTRIAFVEFA+A++AL ALNCSGM
Sbjct: 252 YCTNIDKKVSQADVRNFFESACGEVTRLRLLGDQLHSTRIAFVEFALADSALSALNCSGM 311

[Close]

BLAST of Carg13105 vs. ExPASy Swiss-Prot
Match: Q9C8M0 (Polyadenylate-binding protein-interacting protein 8 OS=Arabidopsis thaliana OX=3702 GN=CID8 PE=1 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 1.3e-80
Identity = 173/289 (59.86%), Postives = 215/289 (74.39%), Query Frame = 0


Query: 20  EMKPKS--EFD-AHKLAEMFSNLNPLAKEFFPSSYSHHDRPDFQFYYHNYNRSSMKNFQP 79
           ++KPKS  E+D   KL  MF  LNP AKEFFPS            Y  N N+S   +F  
Sbjct: 38  DLKPKSKPEYDQMKKLVAMFKKLNPEAKEFFPS------------YKRNTNQSD--DFVI 97

Query: 80  ADQLLHNDNDR----RRRNDNNNQGRR-RMNNRSIRAQQEESVMRTVYVSDIDKDVSEEE 139
           A +    DN +    RRR +N NQGRR R+  R+ +AQ+E+S+ RTVYVSDID+ V+EE 
Sbjct: 98  AIKPSGEDNKKVAINRRRRNNYNQGRRVRLPGRASKAQREDSIRRTVYVSDIDQSVTEEG 157

Query: 140 LA-------KVNDCRICGDPHSVLRFAFVEFANEPSARAATGLSGTMVGSYPIKVLPSKT 199
           LA       +V DCRICGDP+SVLRFAFVEF+++  AR+A  L GTM+G YP++VLPSKT
Sbjct: 158 LAGLFSSCGQVVDCRICGDPNSVLRFAFVEFSDDQGARSALSLGGTMIGYYPVRVLPSKT 217

Query: 200 AILPVNPTFLPKSNDEWDMCTRTIYCTNIDKKVSQIEVKNFFETSCGEVTRLRLLGDQLH 259
           AILPVNPTFLP+S DE +MC+RTIYCTN+DK  ++ +V  FF+++CGEVTRLRLLGDQ+H
Sbjct: 218 AILPVNPTFLPRSEDEREMCSRTIYCTNVDKNATEDDVNTFFQSACGEVTRLRLLGDQVH 277

Query: 260 STRIAFVEFAMAETALQALNCSGMILGTQPIRVSPSKTPVRPRVTRPGS 294
           STRIAFVEFAMAE+A+ ALNCSG++LG+QPIRVSPSKTPVR R+TR  S
Sbjct: 278 STRIAFVEFAMAESAVAALNCSGIVLGSQPIRVSPSKTPVRSRITRSPS 312

[Close]

BLAST of Carg13105 vs. ExPASy Swiss-Prot
Match: Q9LPI5 (Polyadenylate-binding protein-interacting protein 11 OS=Arabidopsis thaliana OX=3702 GN=CID11 PE=2 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 1.1e-74
Identity = 158/273 (57.88%), Postives = 194/273 (71.06%), Query Frame = 0


Query: 28  DAHKLAEMFSNLNPLAKEFFPSSYSHHDRPDFQFYYHNYNRSSMKN---FQPADQLLHND 87
           D  +L E+FS LNP+A+EF P S +          +     S  +N       +    N+
Sbjct: 82  DMRELQELFSKLNPMAEEFVPPSLNKQGGNGVNGGFFTSAGSFFRNNGFAGTGNGGYGNE 141

Query: 88  NDRRRRNDNNNQGRRRMNNRSIRAQQEESVMRTVYVSDIDKDVSEEELA-------KVND 147
           N   RR  +  QG+RRMN R+  AQ+E+ + RTVYVSD+D+ V+EE+LA       +V D
Sbjct: 142 NGGFRRKKSFGQGKRRMNARTSMAQREDVIRRTVYVSDLDQQVTEEQLAGLFVSCGQVVD 201

Query: 148 CRICGDPHSVLRFAFVEFANEPSARAATGLSGTMVGSYPIKVLPSKTAILPVNPTFLPKS 207
           CRICGDP+SVLRFAF+EF +E  A  A  LSGTM+G YP+KVLPSKTAI PVNPTFLP++
Sbjct: 202 CRICGDPNSVLRFAFIEFTDEEGAMTALNLSGTMLGFYPVKVLPSKTAIAPVNPTFLPRT 261

Query: 208 NDEWDMCTRTIYCTNIDKKVSQIEVKNFFETSCGEVTRLRLLGDQLHSTRIAFVEFAMAE 267
            DE +MC RTIYCTNIDKKV+Q +VK FFE+ CGEV RLRLLGD  HSTRIAFVEF MAE
Sbjct: 262 EDEREMCARTIYCTNIDKKVTQSDVKIFFESFCGEVYRLRLLGDYQHSTRIAFVEFVMAE 321

Query: 268 TALQALNCSGMILGTQPIRVSPSKTPVRPRVTR 291
           +A+ ALNCSG++LG+ PIRVSPSKTPVRPR  R
Sbjct: 322 SAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPR 354

[Close]

BLAST of Carg13105 vs. ExPASy Swiss-Prot
Match: Q9S7N9 (Polyadenylate-binding protein-interacting protein 12 OS=Arabidopsis thaliana OX=3702 GN=CID12 PE=1 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 1.2e-73
Identity = 156/269 (57.99%), Postives = 192/269 (71.38%), Query Frame = 0


Query: 28  DAHKLAEMFSNLNPLAKEFFPSSYSHHDRPDFQ--FYYHNYNRSSMKNFQPADQLLHNDN 87
           D  +L E+ S LNP+AKEF P S +      F   F+  N    +  NF      ++ D 
Sbjct: 65  DMRELHELLSKLNPMAKEFIPPSLTKPVVNGFNGGFFAVNNGFVAAGNFP-----VNEDG 124

Query: 88  DRRRRNDNNNQGRRRMNNRSIRAQQEESVMRTVYVSDIDKDVSEEELA-------KVNDC 147
             RR+     QG+RRMN R+  AQ+EE + RTVYVSDID+ V+EE+LA       +V DC
Sbjct: 125 SFRRKKSFGQQGKRRMNPRTSLAQREEIIRRTVYVSDIDQQVTEEQLAGLFIGFGQVVDC 184

Query: 148 RICGDPHSVLRFAFVEFANEPSARAATGLSGTMVGSYPIKVLPSKTAILPVNPTFLPKSN 207
           RICGDP+SVLRFAF+EF +E  AR A  LSGTM+G YP+KV+PSKTAI PVNPTFLP++ 
Sbjct: 185 RICGDPNSVLRFAFIEFTDEVGARTALNLSGTMLGFYPVKVMPSKTAIAPVNPTFLPRTE 244

Query: 208 DEWDMCTRTIYCTNIDKKVSQIEVKNFFETSCGEVTRLRLLGDQLHSTRIAFVEFAMAET 267
           DE +MC RTIYCTNIDKK++Q ++K FFE+ CGEV RLRLLGD  H TRI FVEF MAE+
Sbjct: 245 DEREMCARTIYCTNIDKKLTQTDIKLFFESVCGEVYRLRLLGDYHHPTRIGFVEFVMAES 304

Query: 268 ALQALNCSGMILGTQPIRVSPSKTPVRPR 288
           A+ ALNCSG++LG+ PIRVSPSKTPVR R
Sbjct: 305 AIAALNCSGVLLGSLPIRVSPSKTPVRSR 328

[Close]

BLAST of Carg13105 vs. ExPASy Swiss-Prot
Match: Q9SG10 (Polyadenylate-binding protein-interacting protein 10 OS=Arabidopsis thaliana OX=3702 GN=CID10 PE=2 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 1.1e-71
Identity = 154/294 (52.38%), Postives = 198/294 (67.35%), Query Frame = 0


Query: 4   VADDSTEVAAAKNFDPEMKPKSEFDAHKLAEMFSNLNPLAKEFFPSSYSHHDRPDFQFYY 63
           + + + +V     F    +  +  +   LA+ FS LNP+A+EF P S +       Q   
Sbjct: 62  INETAQKVQTLNGFSGNGERDNNGEIKDLADAFSKLNPMAQEFVPPSLARS-----QSGV 121

Query: 64  HNYNRSSMKNFQPADQLLHNDNDRRRRNDNNNQGRRRMNNRSIRAQQEESVMRTVYVSDI 123
                    NF    +L   ++   RR  +  QG+RRMN R+  AQ+++ + RTVYVSDI
Sbjct: 122 LRNGLGFTNNFAAPPKLADGNDHFPRRRRSFGQGKRRMNKRTSLAQKDDVIRRTVYVSDI 181

Query: 124 DKDVSEEELA-------KVNDCRICGDPHSVLRFAFVEFANEPSARAATGLSGTMVGSYP 183
           D+ V+EE LA       +V DCR+CGDP+SVLRFAF+EF NE  ARAA  +SGT++G YP
Sbjct: 182 DQQVTEENLAGVFINCGQVVDCRVCGDPNSVLRFAFIEFTNEEGARAALSMSGTVLGFYP 241

Query: 184 IKVLPSKTAILPVNPTFLPKSNDEWDMCTRTIYCTNIDKKVSQIEVKNFFETSCGEVTRL 243
           +KVLPSKTAI PVNPTFLP+S DE +MC RT+YCTNIDK+++QI++K FFE  CGEV RL
Sbjct: 242 LKVLPSKTAIAPVNPTFLPRSEDEREMCVRTVYCTNIDKRITQIDLKGFFEMLCGEVHRL 301

Query: 244 RLLGDQLHSTRIAFVEFAMAETALQALNCSGMILGTQPIRVSPSKTPVRPRVTR 291
           R LGD  H TRIAFVEFAMAE+A+ AL+CSG++LG  PIRVSPSKTPVRP   R
Sbjct: 302 R-LGDYHHQTRIAFVEFAMAESAIAALHCSGIVLGALPIRVSPSKTPVRPHFPR 349

[Close]

BLAST of Carg13105 vs. ExPASy TrEMBL
Match: A0A6J1FUB0 (polyadenylate-binding protein-interacting protein 9-like OS=Cucurbita moschata OX=3662 GN=LOC111447348 PE=4 SV=1)

HSP 1 Score: 575.9 bits (1483), Expect = 1.0e-160
Identity = 297/305 (97.38%), Postives = 297/305 (97.38%), Query Frame = 0


Query: 1   MAVVADDSTEVAAAKNFDPEMKPKSEFDAHKLAEMFSNLNPLAKEFFPSSYSHHDRPDFQ 60
           MAVVADDSTEVAAAKNFDPEMKPKSEFDAHKLAEMFSNLNPLAKEFFPSSYSHHDRPDFQ
Sbjct: 1   MAVVADDSTEVAAAKNFDPEMKPKSEFDAHKLAEMFSNLNPLAKEFFPSSYSHHDRPDFQ 60

Query: 61  FYYHNYNRSSMKNFQPADQLLHNDNDRRRRNDNNNQGRRRMNNRSIRAQQEESVMRTVYV 120
           FYYHNYNRSSMKNFQPADQLLHNDNDRRRRNDNNNQGRRRMNNRSIRAQQEESVMRTVYV
Sbjct: 61  FYYHNYNRSSMKNFQPADQLLHNDNDRRRRNDNNNQGRRRMNNRSIRAQQEESVMRTVYV 120

Query: 121 SDIDKDVSEEELAK--------VNDCRICGDPHSVLRFAFVEFANEPSARAATGLSGTMV 180
           SDIDKDVSEEELAK        VNDCRICGDPHSVLRFAFVEFANEPSARAATGLSGTMV
Sbjct: 121 SDIDKDVSEEELAKVFREYCGYVNDCRICGDPHSVLRFAFVEFANEPSARAATGLSGTMV 180

Query: 181 GSYPIKVLPSKTAILPVNPTFLPKSNDEWDMCTRTIYCTNIDKKVSQIEVKNFFETSCGE 240
           GSYPIKVLPSKTAILPVNPTFLPKSNDEWDMCTRTIYCTNIDKKVSQIEVKNFFETSCGE
Sbjct: 181 GSYPIKVLPSKTAILPVNPTFLPKSNDEWDMCTRTIYCTNIDKKVSQIEVKNFFETSCGE 240

Query: 241 VTRLRLLGDQLHSTRIAFVEFAMAETALQALNCSGMILGTQPIRVSPSKTPVRPRVTRPG 298
           VTRLRLLGDQLHSTRIAFVEFAMAETALQALNCSGMILGTQPIRVSPSKTPVRPRVTRPG
Sbjct: 241 VTRLRLLGDQLHSTRIAFVEFAMAETALQALNCSGMILGTQPIRVSPSKTPVRPRVTRPG 300

[Close]

BLAST of Carg13105 vs. ExPASy TrEMBL
Match: A0A6J1J3J1 (polyadenylate-binding protein-interacting protein 9-like OS=Cucurbita maxima OX=3661 GN=LOC111481021 PE=4 SV=1)

HSP 1 Score: 568.5 bits (1464), Expect = 1.6e-158
Identity = 294/305 (96.39%), Postives = 296/305 (97.05%), Query Frame = 0


Query: 1   MAVVADDSTEVAAAKNFDPEMKPKSEFDAHKLAEMFSNLNPLAKEFFPSSYSHHDRPDFQ 60
           MAVVA+DS+EVAAAKNFDPEMKPKSEFDA KLAEMFSNLNPLAKEFFPSSYSHHDRPDFQ
Sbjct: 1   MAVVAEDSSEVAAAKNFDPEMKPKSEFDALKLAEMFSNLNPLAKEFFPSSYSHHDRPDFQ 60

Query: 61  FYYHNYNRSSMKNFQPADQLLHNDNDRRRRNDNNNQGRRRMNNRSIRAQQEESVMRTVYV 120
           FYYHNYNRSSMKNFQPADQLLHNDNDRRRRNDNNNQGRRRMNNRSIRAQQEESVMRTVYV
Sbjct: 61  FYYHNYNRSSMKNFQPADQLLHNDNDRRRRNDNNNQGRRRMNNRSIRAQQEESVMRTVYV 120

Query: 121 SDIDKDVSEEELAK--------VNDCRICGDPHSVLRFAFVEFANEPSARAATGLSGTMV 180
           SDIDKDVSEEELAK        VNDCRICGDPHSVLRFAFVEFANEPSARAATGLSGTMV
Sbjct: 121 SDIDKDVSEEELAKVFREYCGYVNDCRICGDPHSVLRFAFVEFANEPSARAATGLSGTMV 180

Query: 181 GSYPIKVLPSKTAILPVNPTFLPKSNDEWDMCTRTIYCTNIDKKVSQIEVKNFFETSCGE 240
           GSYPIKVLPSKTAILPVNPTFLPKSNDEWDMCTRTIYCTNIDKKVSQIEVKNFFETSCGE
Sbjct: 181 GSYPIKVLPSKTAILPVNPTFLPKSNDEWDMCTRTIYCTNIDKKVSQIEVKNFFETSCGE 240

Query: 241 VTRLRLLGDQLHSTRIAFVEFAMAETALQALNCSGMILGTQPIRVSPSKTPVRPRVTRPG 298
           VTRLRLLGDQLHSTRIAFVEFAMAETALQALNCSGMILGTQPIRVSPSKTPVRPRVTRPG
Sbjct: 241 VTRLRLLGDQLHSTRIAFVEFAMAETALQALNCSGMILGTQPIRVSPSKTPVRPRVTRPG 300

[Close]

BLAST of Carg13105 vs. ExPASy TrEMBL
Match: A0A6J1CMC4 (polyadenylate-binding protein-interacting protein 9 OS=Momordica charantia OX=3673 GN=LOC111012929 PE=4 SV=1)

HSP 1 Score: 509.6 bits (1311), Expect = 8.8e-141
Identity = 265/305 (86.89%), Postives = 277/305 (90.82%), Query Frame = 0


Query: 1   MAVVADDSTEVAAAKNFDPEMKPKSEFDAHKLAEMFSNLNPLAKEFFPSSYSHHDRPDFQ 60
           MA VA+D  E AAAKNFDP MKPKSEFDAHKLAEMFSNLNPLAKEFFPSSYSHHDR +FQ
Sbjct: 1   MAAVAEDIGEAAAAKNFDPNMKPKSEFDAHKLAEMFSNLNPLAKEFFPSSYSHHDRQEFQ 60

Query: 61  FYYHNYNRSSMKNFQPADQLLHNDNDRRRRNDNNNQGRRRMNNRSIRAQQEESVMRTVYV 120
           FYY N NRSS KNFQ ADQLLH+DN+RRRR D NNQGRRR+N+RS+RAQQEES+ RTVYV
Sbjct: 61  FYYQNNNRSSTKNFQVADQLLHSDNNRRRRQDFNNQGRRRLNSRSVRAQQEESIRRTVYV 120

Query: 121 SDIDKDVSEEELAK--------VNDCRICGDPHSVLRFAFVEFANEPSARAATGLSGTMV 180
           SDIDKDVSEEELAK        VNDCRICGDPHSVLRFAFVEFANE SARAA  L GTMV
Sbjct: 121 SDIDKDVSEEELAKVFREFCGYVNDCRICGDPHSVLRFAFVEFANEHSARAALNLGGTMV 180

Query: 181 GSYPIKVLPSKTAILPVNPTFLPKSNDEWDMCTRTIYCTNIDKKVSQIEVKNFFETSCGE 240
           GSYPIKVLPSKTAILPVNPTFLPKSNDEWDMCTRTIYCTNIDKKVSQ EVK+FFETSCGE
Sbjct: 181 GSYPIKVLPSKTAILPVNPTFLPKSNDEWDMCTRTIYCTNIDKKVSQAEVKSFFETSCGE 240

Query: 241 VTRLRLLGDQLHSTRIAFVEFAMAETALQALNCSGMILGTQPIRVSPSKTPVRPRVTRPG 298
           VTRLRLLGDQLHSTRIAFVEFA+AETALQALNCSGMILG+QPIRVSPSKTPVRPRVTRPG
Sbjct: 241 VTRLRLLGDQLHSTRIAFVEFALAETALQALNCSGMILGSQPIRVSPSKTPVRPRVTRPG 300

[Close]

BLAST of Carg13105 vs. ExPASy TrEMBL
Match: A0A5A7VBL7 (Polyadenylate-binding protein-interacting protein 9 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G001000 PE=4 SV=1)

HSP 1 Score: 503.8 bits (1296), Expect = 4.8e-139
Identity = 264/304 (86.84%), Postives = 275/304 (90.46%), Query Frame = 0


Query: 1   MAVVADDSTEVAAAKNFDPEMKPKSEFDAHKLAEMFSNLNPLAKEFFPSSYSHHDRPDFQ 60
           MA VA+DS+E AA KNFD  M PKSEFDAHKLAEMFSNLNPLAKEFFPSSYSHHDR DF 
Sbjct: 1   MAAVAEDSSEAAAVKNFDHNMNPKSEFDAHKLAEMFSNLNPLAKEFFPSSYSHHDRQDFH 60

Query: 61  FYYHNYNRSSMKNFQPADQLLHNDNDRRRRNDNNNQGRRRM-NNRSIRAQQEESVMRTVY 120
           FYY N NRS  KNFQ ADQLLH+DN+RRRR D NNQGRRRM NNRS+RAQQEES+ RTVY
Sbjct: 61  FYYQNNNRSLAKNFQVADQLLHSDNNRRRRPDFNNQGRRRMNNNRSVRAQQEESIRRTVY 120

Query: 121 VSDIDKDVSEEELAK--------VNDCRICGDPHSVLRFAFVEFANEPSARAATGLSGTM 180
           VSDIDKDVSEEELAK        VNDCRICGDPHSVLRFAFVEFANE SARAA GLSGT+
Sbjct: 121 VSDIDKDVSEEELAKVFREFCGYVNDCRICGDPHSVLRFAFVEFANEHSARAAIGLSGTV 180

Query: 181 VGSYPIKVLPSKTAILPVNPTFLPKSNDEWDMCTRTIYCTNIDKKVSQIEVKNFFETSCG 240
           VGSYP+KVLPSKTAILPVNPTFLPKSNDEWDMCTRTIYCTNIDKKVSQ EVK+FFETSCG
Sbjct: 181 VGSYPVKVLPSKTAILPVNPTFLPKSNDEWDMCTRTIYCTNIDKKVSQAEVKSFFETSCG 240

Query: 241 EVTRLRLLGDQLHSTRIAFVEFAMAETALQALNCSGMILGTQPIRVSPSKTPVRPRVTRP 296
           EVTRLRLLGDQLHSTRIAFVEFA+AETALQALNCSGMILG QPIRVSPSKTPVRPRVTRP
Sbjct: 241 EVTRLRLLGDQLHSTRIAFVEFALAETALQALNCSGMILGAQPIRVSPSKTPVRPRVTRP 300

[Close]

BLAST of Carg13105 vs. ExPASy TrEMBL
Match: A0A1S3BSA4 (polyadenylate-binding protein-interacting protein 9 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492975 PE=4 SV=1)

HSP 1 Score: 503.8 bits (1296), Expect = 4.8e-139
Identity = 264/304 (86.84%), Postives = 275/304 (90.46%), Query Frame = 0


Query: 1   MAVVADDSTEVAAAKNFDPEMKPKSEFDAHKLAEMFSNLNPLAKEFFPSSYSHHDRPDFQ 60
           MA VA+DS+E AA KNFD  M PKSEFDAHKLAEMFSNLNPLAKEFFPSSYSHHDR DF 
Sbjct: 1   MAAVAEDSSEAAAVKNFDHNMNPKSEFDAHKLAEMFSNLNPLAKEFFPSSYSHHDRQDFH 60

Query: 61  FYYHNYNRSSMKNFQPADQLLHNDNDRRRRNDNNNQGRRRM-NNRSIRAQQEESVMRTVY 120
           FYY N NRS  KNFQ ADQLLH+DN+RRRR D NNQGRRRM NNRS+RAQQEES+ RTVY
Sbjct: 61  FYYQNNNRSLAKNFQVADQLLHSDNNRRRRPDFNNQGRRRMNNNRSVRAQQEESIRRTVY 120

Query: 121 VSDIDKDVSEEELAK--------VNDCRICGDPHSVLRFAFVEFANEPSARAATGLSGTM 180
           VSDIDKDVSEEELAK        VNDCRICGDPHSVLRFAFVEFANE SARAA GLSGT+
Sbjct: 121 VSDIDKDVSEEELAKVFREFCGYVNDCRICGDPHSVLRFAFVEFANEHSARAAIGLSGTV 180

Query: 181 VGSYPIKVLPSKTAILPVNPTFLPKSNDEWDMCTRTIYCTNIDKKVSQIEVKNFFETSCG 240
           VGSYP+KVLPSKTAILPVNPTFLPKSNDEWDMCTRTIYCTNIDKKVSQ EVK+FFETSCG
Sbjct: 181 VGSYPVKVLPSKTAILPVNPTFLPKSNDEWDMCTRTIYCTNIDKKVSQAEVKSFFETSCG 240

Query: 241 EVTRLRLLGDQLHSTRIAFVEFAMAETALQALNCSGMILGTQPIRVSPSKTPVRPRVTRP 296
           EVTRLRLLGDQLHSTRIAFVEFA+AETALQALNCSGMILG QPIRVSPSKTPVRPRVTRP
Sbjct: 241 EVTRLRLLGDQLHSTRIAFVEFALAETALQALNCSGMILGAQPIRVSPSKTPVRPRVTRP 300

[Close]

BLAST of Carg13105 vs. TAIR 10
Match: AT3G14450.1 (CTC-interacting domain 9 )

HSP 1 Score: 328.2 bits (840), Expect = 7.0e-90
Identity = 188/325 (57.85%), Postives = 222/325 (68.31%), Query Frame = 0


Query: 3   VVADDSTEVAAAKN------------FDPEMKPKSEFDAHKLAEMFSNLNPLAKEFFPSS 62
           VV DD  EV+                 D + + +S  D HKL  MF  LNPLAKEFFPS 
Sbjct: 12  VVVDDVKEVSTKSEKIIDEGIEKSSITDSKTETESRLDMHKLVAMFKKLNPLAKEFFPSY 71

Query: 63  YSHHDRPDFQFYYHNYNRSSMKNFQPADQL---------------LHNDNDRRRRNDNNN 122
           Y             N   +    F PAD                   +DN R+RR  N +
Sbjct: 72  YDPK---------KNNQVAKANQFLPADDFETTKKQSGEEFDLDAKKDDNTRKRR--NYS 131

Query: 123 QGRRRMNNRSIRAQQEESVMRTVYVSDIDKDVSEEELA-------KVNDCRICGDPHSVL 182
           QGRRR+  R  +AQ+E+S+ RTVYVSDID+ V+EE LA       +V DCRICGDPHSVL
Sbjct: 132 QGRRRLTGRISKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSNCGQVVDCRICGDPHSVL 191

Query: 183 RFAFVEFANEPSARAATGLSGTMVGSYPIKVLPSKTAILPVNPTFLPKSNDEWDMCTRTI 242
           RFAFVEFA++  A  A  L GTM+G YP++VLPSKTAILPVNPTFLP+S DE +MCTRTI
Sbjct: 192 RFAFVEFADDQGAHEALSLGGTMLGFYPVRVLPSKTAILPVNPTFLPRSEDEREMCTRTI 251

Query: 243 YCTNIDKKVSQIEVKNFFETSCGEVTRLRLLGDQLHSTRIAFVEFAMAETALQALNCSGM 294
           YCTNIDKKVSQ +V+NFFE++CGEVTRLRLLGDQLHSTRIAFVEFA+A++AL ALNCSGM
Sbjct: 252 YCTNIDKKVSQADVRNFFESACGEVTRLRLLGDQLHSTRIAFVEFALADSALSALNCSGM 311

[Close]

BLAST of Carg13105 vs. TAIR 10
Match: AT1G53650.1 (CTC-interacting domain 8 )

HSP 1 Score: 301.2 bits (770), Expect = 9.1e-82
Identity = 173/289 (59.86%), Postives = 215/289 (74.39%), Query Frame = 0


Query: 20  EMKPKS--EFD-AHKLAEMFSNLNPLAKEFFPSSYSHHDRPDFQFYYHNYNRSSMKNFQP 79
           ++KPKS  E+D   KL  MF  LNP AKEFFPS            Y  N N+S   +F  
Sbjct: 38  DLKPKSKPEYDQMKKLVAMFKKLNPEAKEFFPS------------YKRNTNQSD--DFVI 97

Query: 80  ADQLLHNDNDR----RRRNDNNNQGRR-RMNNRSIRAQQEESVMRTVYVSDIDKDVSEEE 139
           A +    DN +    RRR +N NQGRR R+  R+ +AQ+E+S+ RTVYVSDID+ V+EE 
Sbjct: 98  AIKPSGEDNKKVAINRRRRNNYNQGRRVRLPGRASKAQREDSIRRTVYVSDIDQSVTEEG 157

Query: 140 LA-------KVNDCRICGDPHSVLRFAFVEFANEPSARAATGLSGTMVGSYPIKVLPSKT 199
           LA       +V DCRICGDP+SVLRFAFVEF+++  AR+A  L GTM+G YP++VLPSKT
Sbjct: 158 LAGLFSSCGQVVDCRICGDPNSVLRFAFVEFSDDQGARSALSLGGTMIGYYPVRVLPSKT 217

Query: 200 AILPVNPTFLPKSNDEWDMCTRTIYCTNIDKKVSQIEVKNFFETSCGEVTRLRLLGDQLH 259
           AILPVNPTFLP+S DE +MC+RTIYCTN+DK  ++ +V  FF+++CGEVTRLRLLGDQ+H
Sbjct: 218 AILPVNPTFLPRSEDEREMCSRTIYCTNVDKNATEDDVNTFFQSACGEVTRLRLLGDQVH 277

Query: 260 STRIAFVEFAMAETALQALNCSGMILGTQPIRVSPSKTPVRPRVTRPGS 294
           STRIAFVEFAMAE+A+ ALNCSG++LG+QPIRVSPSKTPVR R+TR  S
Sbjct: 278 STRIAFVEFAMAESAVAALNCSGIVLGSQPIRVSPSKTPVRSRITRSPS 312

[Close]

BLAST of Carg13105 vs. TAIR 10
Match: AT1G53650.2 (CTC-interacting domain 8 )

HSP 1 Score: 301.2 bits (770), Expect = 9.1e-82
Identity = 172/285 (60.35%), Postives = 214/285 (75.09%), Query Frame = 0


Query: 20  EMKPKS--EFD-AHKLAEMFSNLNPLAKEFFPSSYSHHDRPDFQFYYHNYNRSSMKNFQP 79
           ++KPKS  E+D   KL  MF  LNP AKEFFPS            Y  N N+S   +F  
Sbjct: 38  DLKPKSKPEYDQMKKLVAMFKKLNPEAKEFFPS------------YKRNTNQSD--DFVI 97

Query: 80  ADQLLHNDNDRRRRNDNNNQGRR-RMNNRSIRAQQEESVMRTVYVSDIDKDVSEEELA-- 139
           A +    DN +RR  +N NQGRR R+  R+ +AQ+E+S+ RTVYVSDID+ V+EE LA  
Sbjct: 98  AIKPSGEDNKKRR--NNYNQGRRVRLPGRASKAQREDSIRRTVYVSDIDQSVTEEGLAGL 157

Query: 140 -----KVNDCRICGDPHSVLRFAFVEFANEPSARAATGLSGTMVGSYPIKVLPSKTAILP 199
                +V DCRICGDP+SVLRFAFVEF+++  AR+A  L GTM+G YP++VLPSKTAILP
Sbjct: 158 FSSCGQVVDCRICGDPNSVLRFAFVEFSDDQGARSALSLGGTMIGYYPVRVLPSKTAILP 217

Query: 200 VNPTFLPKSNDEWDMCTRTIYCTNIDKKVSQIEVKNFFETSCGEVTRLRLLGDQLHSTRI 259
           VNPTFLP+S DE +MC+RTIYCTN+DK  ++ +V  FF+++CGEVTRLRLLGDQ+HSTRI
Sbjct: 218 VNPTFLPRSEDEREMCSRTIYCTNVDKNATEDDVNTFFQSACGEVTRLRLLGDQVHSTRI 277

Query: 260 AFVEFAMAETALQALNCSGMILGTQPIRVSPSKTPVRPRVTRPGS 294
           AFVEFAMAE+A+ ALNCSG++LG+QPIRVSPSKTPVR R+TR  S
Sbjct: 278 AFVEFAMAESAVAALNCSGIVLGSQPIRVSPSKTPVRSRITRSPS 306

[Close]

BLAST of Carg13105 vs. TAIR 10
Match: AT1G32790.1 (CTC-interacting domain 11 )

HSP 1 Score: 281.6 bits (719), Expect = 7.5e-76
Identity = 158/273 (57.88%), Postives = 194/273 (71.06%), Query Frame = 0


Query: 28  DAHKLAEMFSNLNPLAKEFFPSSYSHHDRPDFQFYYHNYNRSSMKN---FQPADQLLHND 87
           D  +L E+FS LNP+A+EF P S +          +     S  +N       +    N+
Sbjct: 82  DMRELQELFSKLNPMAEEFVPPSLNKQGGNGVNGGFFTSAGSFFRNNGFAGTGNGGYGNE 141

Query: 88  NDRRRRNDNNNQGRRRMNNRSIRAQQEESVMRTVYVSDIDKDVSEEELA-------KVND 147
           N   RR  +  QG+RRMN R+  AQ+E+ + RTVYVSD+D+ V+EE+LA       +V D
Sbjct: 142 NGGFRRKKSFGQGKRRMNARTSMAQREDVIRRTVYVSDLDQQVTEEQLAGLFVSCGQVVD 201

Query: 148 CRICGDPHSVLRFAFVEFANEPSARAATGLSGTMVGSYPIKVLPSKTAILPVNPTFLPKS 207
           CRICGDP+SVLRFAF+EF +E  A  A  LSGTM+G YP+KVLPSKTAI PVNPTFLP++
Sbjct: 202 CRICGDPNSVLRFAFIEFTDEEGAMTALNLSGTMLGFYPVKVLPSKTAIAPVNPTFLPRT 261

Query: 208 NDEWDMCTRTIYCTNIDKKVSQIEVKNFFETSCGEVTRLRLLGDQLHSTRIAFVEFAMAE 267
            DE +MC RTIYCTNIDKKV+Q +VK FFE+ CGEV RLRLLGD  HSTRIAFVEF MAE
Sbjct: 262 EDEREMCARTIYCTNIDKKVTQSDVKIFFESFCGEVYRLRLLGDYQHSTRIAFVEFVMAE 321

Query: 268 TALQALNCSGMILGTQPIRVSPSKTPVRPRVTR 291
           +A+ ALNCSG++LG+ PIRVSPSKTPVRPR  R
Sbjct: 322 SAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPR 354

[Close]

BLAST of Carg13105 vs. TAIR 10
Match: AT4G10610.1 (CTC-interacting domain 12 )

HSP 1 Score: 278.1 bits (710), Expect = 8.3e-75
Identity = 156/269 (57.99%), Postives = 192/269 (71.38%), Query Frame = 0


Query: 28  DAHKLAEMFSNLNPLAKEFFPSSYSHHDRPDFQ--FYYHNYNRSSMKNFQPADQLLHNDN 87
           D  +L E+ S LNP+AKEF P S +      F   F+  N    +  NF      ++ D 
Sbjct: 65  DMRELHELLSKLNPMAKEFIPPSLTKPVVNGFNGGFFAVNNGFVAAGNFP-----VNEDG 124

Query: 88  DRRRRNDNNNQGRRRMNNRSIRAQQEESVMRTVYVSDIDKDVSEEELA-------KVNDC 147
             RR+     QG+RRMN R+  AQ+EE + RTVYVSDID+ V+EE+LA       +V DC
Sbjct: 125 SFRRKKSFGQQGKRRMNPRTSLAQREEIIRRTVYVSDIDQQVTEEQLAGLFIGFGQVVDC 184

Query: 148 RICGDPHSVLRFAFVEFANEPSARAATGLSGTMVGSYPIKVLPSKTAILPVNPTFLPKSN 207
           RICGDP+SVLRFAF+EF +E  AR A  LSGTM+G YP+KV+PSKTAI PVNPTFLP++ 
Sbjct: 185 RICGDPNSVLRFAFIEFTDEVGARTALNLSGTMLGFYPVKVMPSKTAIAPVNPTFLPRTE 244

Query: 208 DEWDMCTRTIYCTNIDKKVSQIEVKNFFETSCGEVTRLRLLGDQLHSTRIAFVEFAMAET 267
           DE +MC RTIYCTNIDKK++Q ++K FFE+ CGEV RLRLLGD  H TRI FVEF MAE+
Sbjct: 245 DEREMCARTIYCTNIDKKLTQTDIKLFFESVCGEVYRLRLLGDYHHPTRIGFVEFVMAES 304

Query: 268 ALQALNCSGMILGTQPIRVSPSKTPVRPR 288
           A+ ALNCSG++LG+ PIRVSPSKTPVR R
Sbjct: 305 AIAALNCSGVLLGSLPIRVSPSKTPVRSR 328

The following BLAST results are available for this feature:

BLAST of Carg13105 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7031122.1	1.3e-162	100.00	Polyadenylate-binding protein-interacting protein 9 [Cucurbita argyrosperma subs...	[more]
XP_022942237.1	2.1e-160	97.38	polyadenylate-binding protein-interacting protein 9-like [Cucurbita moschata] >X...	[more]
XP_023531181.1	7.8e-160	96.72	polyadenylate-binding protein-interacting protein 9-like [Cucurbita pepo subsp. ...	[more]
XP_022982064.1	3.3e-158	96.39	polyadenylate-binding protein-interacting protein 9-like [Cucurbita maxima]	[more]
XP_022142940.1	1.8e-140	86.89	polyadenylate-binding protein-interacting protein 9 [Momordica charantia]	[more]

BLAST of Carg13105 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LRR6	9.8e-89	57.85	Polyadenylate-binding protein-interacting protein 9 OS=Arabidopsis thaliana OX=3...	[more]
Q9C8M0	1.3e-80	59.86	Polyadenylate-binding protein-interacting protein 8 OS=Arabidopsis thaliana OX=3...	[more]
Q9LPI5	1.1e-74	57.88	Polyadenylate-binding protein-interacting protein 11 OS=Arabidopsis thaliana OX=...	[more]
Q9S7N9	1.2e-73	57.99	Polyadenylate-binding protein-interacting protein 12 OS=Arabidopsis thaliana OX=...	[more]
Q9SG10	1.1e-71	52.38	Polyadenylate-binding protein-interacting protein 10 OS=Arabidopsis thaliana OX=...	[more]

BLAST of Carg13105 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FUB0	1.0e-160	97.38	polyadenylate-binding protein-interacting protein 9-like OS=Cucurbita moschata O...	[more]
A0A6J1J3J1	1.6e-158	96.39	polyadenylate-binding protein-interacting protein 9-like OS=Cucurbita maxima OX=...	[more]
A0A6J1CMC4	8.8e-141	86.89	polyadenylate-binding protein-interacting protein 9 OS=Momordica charantia OX=36...	[more]
A0A5A7VBL7	4.8e-139	86.84	Polyadenylate-binding protein-interacting protein 9 isoform X1 OS=Cucumis melo v...	[more]
A0A1S3BSA4	4.8e-139	86.84	polyadenylate-binding protein-interacting protein 9 isoform X1 OS=Cucumis melo O...	[more]

BLAST of Carg13105 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G14450.1	7.0e-90	57.85	CTC-interacting domain 9	[more]
AT1G53650.1	9.1e-82	59.86	CTC-interacting domain 8	[more]
AT1G53650.2	9.1e-82	60.35	CTC-interacting domain 8	[more]
AT1G32790.1	7.5e-76	57.88	CTC-interacting domain 11	[more]
AT4G10610.1	8.3e-75	57.99	CTC-interacting domain 12	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 207..278 e-value: 8.0E-12 score: 55.3 coord: 117..180 e-value: 0.0021 score: 27.3
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 208..275 e-value: 9.5E-8 score: 31.8 coord: 119..178 e-value: 5.4E-5 score: 22.9
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 116..184 score: 10.83774
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 206..282 score: 12.440948
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 202..278 e-value: 3.6E-14 score: 54.4
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 66..185 e-value: 1.3E-10 score: 43.4
IPR009818	Ataxin-2, C-terminal	PFAM	PF07145	PAM2	coord: 35..51 e-value: 6.2E-5 score: 22.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..105
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 278..297
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..97
None	No IPR available	PANTHER	PTHR32343:SF22	POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 9	coord: 2..291
None	No IPR available	PANTHER	PTHR32343	SERINE/ARGININE-RICH SPLICING FACTOR	coord: 2..291
IPR034825	CID8-like protein, RNA recognition motif 2	CDD	cd12460	RRM2_CID8_like	coord: 202..283 e-value: 8.65054E-55 score: 170.755
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 196..290
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 106..185

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg13105-RA	Carg13105-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding