Carg13101 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg13101
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	cationic amino acid transporter 8, vacuolar
Location	Carg_Chr04: 3467639 .. 3468064 (-)
RNA-Seq Expression	Carg13101
Synteny	Carg13101

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCAACACTGATATCTCCGATTTTCTTCGGATTAAGGTGAGTTTCTTTCCAGATGTGTTTAATCTTCTTGATCCAGTTACTGTTGTTGTGCTTCTTGTTACTGATGGTATTCATATGAGTGGAACGAGGAGAACATCTTTCTTGACATGGATAATTTCTGTGATTAGTAGTTTGCTTATTGTTCTTTTTATTGTGGTTGGATTTGTTGGGGGAGTTCTTCAATTTTGTTATCCTTTTTCCCTTTCGGTCAAAGGGAGCTGCAGCTGTTGTTTACTGGTTTTTGATATGGTGGCCTCCATTGTTGAGGAAGACAAGCAACCTTCAAGAGATGTACCAGATTGGATTAATGTCTATGATCTCTGTGTTCTAGTGCTTGATGGCATTTTCATTATCAAAGCTACAAAAATATACCGTGATAAATAG

mRNA sequence

ATGATCAACACTGATATCTCCGATTTTCTTCGGATTAAGGTGAGTTTCTTTCCAGATGTGTTTAATCTTCTTGATCCAGTTACTGTTGTTGTGCTTCTTGTTACTGATGGTATTCATATGAGTGGAACGAGGAGAACATCTTTCTTGACATGGATAATTTCTGTGATTAGTAGTTTGCTTATTGTTCTTTTTATTGTGGTTGGATTTGTTGGGGGAGTTCTTCAATTTTGTTATCCTTTTTCCCTTTCGGTCAAAGGGAGCTGCAGCTGTTGTTTACTGGTTTTTGATATGGTGGCCTCCATTGTTGAGGAAGACAAGCAACCTTCAAGAGATGTACCAGATTGGATTAATGTCTATGATCTCTGTGTTCTAGTGCTTGATGGCATTTTCATTATCAAAGCTACAAAAATATACCGTGATAAATAG

Coding sequence (CDS)

ATGATCAACACTGATATCTCCGATTTTCTTCGGATTAAGGTGAGTTTCTTTCCAGATGTGTTTAATCTTCTTGATCCAGTTACTGTTGTTGTGCTTCTTGTTACTGATGGTATTCATATGAGTGGAACGAGGAGAACATCTTTCTTGACATGGATAATTTCTGTGATTAGTAGTTTGCTTATTGTTCTTTTTATTGTGGTTGGATTTGTTGGGGGAGTTCTTCAATTTTGTTATCCTTTTTCCCTTTCGGTCAAAGGGAGCTGCAGCTGTTGTTTACTGGTTTTTGATATGGTGGCCTCCATTGTTGAGGAAGACAAGCAACCTTCAAGAGATGTACCAGATTGGATTAATGTCTATGATCTCTGTGTTCTAGTGCTTGATGGCATTTTCATTATCAAAGCTACAAAAATATACCGTGATAAATAG

Protein sequence

MINTDISDFLRIKVSFFPDVFNLLDPVTVVVLLVTDGIHMSGTRRTSFLTWIISVISSLLIVLFIVVGFVGGVLQFCYPFSLSVKGSCSCCLLVFDMVASIVEEDKQPSRDVPDWINVYDLCVLVLDGIFIIKATKIYRDK

Homology

[Close]

BLAST of Carg13101 vs. NCBI nr
Match: KAG6600484.1 (Cationic amino acid transporter 8, vacuolar, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031126.1 Cationic amino acid transporter 8, vacuolar, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 276.6 bits (706), Expect = 1.2e-70
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MINTDISDFLRIKVSFFPDVFNLLDPVTVVVLLVTDGIHMSGTRRTSFLTWIISVISSLL 60
           MINTDISDFLRIKVSFFPDVFNLLDPVTVVVLLVTDGIHMSGTRRTSFLTWIISVISSLL
Sbjct: 1   MINTDISDFLRIKVSFFPDVFNLLDPVTVVVLLVTDGIHMSGTRRTSFLTWIISVISSLL 60

Query: 61  IVLFIVVGFVGGVLQFCYPFSLSVKGSCSCCLLVFDMVASIVEEDKQPSRDVPDWINVYD 120
           IVLFIVVGFVGGVLQFCYPFSLSVKGSCSCCLLVFDMVASIVEEDKQPSRDVPDWINVYD
Sbjct: 61  IVLFIVVGFVGGVLQFCYPFSLSVKGSCSCCLLVFDMVASIVEEDKQPSRDVPDWINVYD 120

Query: 121 LCVLVLDGIFIIKATKIYRDK 142
           LCVLVLDGIFIIKATKIYRDK
Sbjct: 121 LCVLVLDGIFIIKATKIYRDK 141

[Close]

BLAST of Carg13101 vs. NCBI nr
Match: XP_022142722.1 (cationic amino acid transporter 8, vacuolar [Momordica charantia])

HSP 1 Score: 121.7 bits (304), Expect = 5.0e-24
Identity = 81/154 (52.60%), Postives = 97/154 (62.99%), Query Frame = 0


Query: 1   MINTDISDFLRIKVSFFPDVFNLLDPVTVVVLLVTDGIHMSGTRRTSFLTWIISVISSLL 60
           MINT+ SDFLRIKVS F D FNLLDP+ VVVLLV +GI MSGTRRTS LTWI SVISS +
Sbjct: 187 MINTNDSDFLRIKVSVFSDGFNLLDPIAVVVLLVANGIAMSGTRRTSLLTWITSVISSFI 246

Query: 61  IVLFIVVGFVGGVLQFCYP-FSLSVKGSCSCCLLV------FDMVASIVEEDKQPSRDVP 120
           IV  IVVGFV G      P F    KG+     +V      FDMVA++ EE K+PSRD+P
Sbjct: 247 IVFVIVVGFVRGSSANLVPFFPYGAKGAFRAAAVVYWSYTGFDMVATMAEETKRPSRDIP 306

Query: 121 -------DWINVYDLCVLVLDGIFIIKATKIYRD 141
                    I+V   C++ L    + K T+I R+
Sbjct: 307 VGLIGSMSMISVI-YCLMALSLTMLQKYTEIDRN 339

[Close]

BLAST of Carg13101 vs. NCBI nr
Match: XP_038874912.1 (cationic amino acid transporter 8, vacuolar-like [Benincasa hispida])

HSP 1 Score: 120.6 bits (301), Expect = 1.1e-23
Identity = 72/120 (60.00%), Postives = 81/120 (67.50%), Query Frame = 0


Query: 1   MINTDISDFLRIKVSFFPDVFNLLDPVTVVVLLVTDGIHMSGTRRTSFLTWIISVISSLL 60
           MINTD  DFLRIK SF  + FNLLDP+ V+VLLV +GI MSGTRRTSFLTWI S+ISSLL
Sbjct: 188 MINTDNPDFLRIKASFLSEGFNLLDPIAVIVLLVANGIAMSGTRRTSFLTWITSIISSLL 247

Query: 61  IVLFIVVGFVGGVLQFCYP-FSLSVKGSCSCCLLV------FDMVASIVEEDKQPSRDVP 114
           I   IVVGFV G      P F    KG      +V      FDMVA++ EE KQPSRD+P
Sbjct: 248 IAFVIVVGFVKGNSANLVPFFPFGAKGVFRAAAVVYWSYTGFDMVATMAEETKQPSRDIP 307

[Close]

BLAST of Carg13101 vs. NCBI nr
Match: XP_022984882.1 (cationic amino acid transporter 8, vacuolar-like [Cucurbita maxima])

HSP 1 Score: 118.6 bits (296), Expect = 4.3e-23
Identity = 78/154 (50.65%), Postives = 95/154 (61.69%), Query Frame = 0


Query: 1   MINTDISDFLRIKVSFFPDVFNLLDPVTVVVLLVTDGIHMSGTRRTSFLTWIISVISSLL 60
           MINTD  DFLRIKV+F  + FNLLDP+ VVVLLV +GI MSGTRRTSFLTWI SV+S+ L
Sbjct: 188 MINTDNPDFLRIKVNFLSEGFNLLDPIAVVVLLVANGIAMSGTRRTSFLTWITSVLSTFL 247

Query: 61  IVLFIVVGFVGGVLQFCYP-FSLSVKGSCSCCLLV------FDMVASIVEEDKQPSRDVP 120
           I   IVVGF+ G      P F    KG      +V      FDMVA++ EE KQPSRD+P
Sbjct: 248 IFFVIVVGFMRGKSSNLVPFFPFGAKGVFRAAAVVYWSYTGFDMVATMAEETKQPSRDIP 307

Query: 121 -------DWINVYDLCVLVLDGIFIIKATKIYRD 141
                    I+V   C++ L    + K T+I R+
Sbjct: 308 VGLIGSMSMISVI-YCLMALSLTMLQKYTEIDRN 340

[Close]

BLAST of Carg13101 vs. NCBI nr
Match: XP_022931332.1 (cationic amino acid transporter 8, vacuolar-like [Cucurbita moschata] >XP_023552965.1 cationic amino acid transporter 8, vacuolar-like [Cucurbita pepo subsp. pepo] >KAG6577054.1 Cationic amino acid transporter 8, vacuolar, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015065.1 Cationic amino acid transporter 8, vacuolar, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 118.6 bits (296), Expect = 4.3e-23
Identity = 78/154 (50.65%), Postives = 95/154 (61.69%), Query Frame = 0


Query: 1   MINTDISDFLRIKVSFFPDVFNLLDPVTVVVLLVTDGIHMSGTRRTSFLTWIISVISSLL 60
           MINTD  DFLRIKV+F  + FNLLDP+ VVVLLV +GI MSGTRRTSFLTWI SV+S+ L
Sbjct: 188 MINTDNPDFLRIKVNFLSEGFNLLDPIAVVVLLVANGIAMSGTRRTSFLTWITSVLSTFL 247

Query: 61  IVLFIVVGFVGGVLQFCYP-FSLSVKGSCSCCLLV------FDMVASIVEEDKQPSRDVP 120
           I   IVVGF+ G      P F    KG      +V      FDMVA++ EE KQPSRD+P
Sbjct: 248 IFFVIVVGFMRGKSSNLVPFFPFGAKGVFRAAAVVYWSYTGFDMVATMAEETKQPSRDIP 307

Query: 121 -------DWINVYDLCVLVLDGIFIIKATKIYRD 141
                    I+V   C++ L    + K T+I R+
Sbjct: 308 VGLIGSMSMISVI-YCLMALSLTMLQKYTEIDRN 340

[Close]

BLAST of Carg13101 vs. ExPASy Swiss-Prot
Match: Q9SHH0 (Cationic amino acid transporter 8, vacuolar OS=Arabidopsis thaliana OX=3702 GN=CAT8 PE=2 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.5e-15
Identity = 59/145 (40.69%), Postives = 81/145 (55.86%), Query Frame = 0


Query: 7   SDFLRIKVSFFPDVFNLLDPVTVVVLLVTDGIHMSGTRRTSFLTWIISVISSLLIVLFIV 66
           SD+ RIKV  F   F+LLDPV V VLLV +GI M+GT+RTS+L  I S+++  +IV  +V
Sbjct: 197 SDYFRIKVDSFAKGFDLLDPVAVAVLLVANGIAMTGTKRTSWLNLITSMVTVCIIVFIVV 256

Query: 67  VGFVGGVLQFCYP-FSLSVKGSCSCCLLV------FDMVASIVEEDKQPSRDVP------ 126
           VGF         P F    KG      +V      FDMVA++ EE ++PSRD+P      
Sbjct: 257 VGFTHSKTSNLVPFFPYGAKGVVQSAAVVYWSYTGFDMVANMAEETEKPSRDIPIGLVGS 316

Query: 127 -DWINVYDLCVLVLDGIFIIKATKI 138
              I V   C++ L    ++K T+I
Sbjct: 317 MSMITVV-YCLMALALTMMVKYTEI 340

[Close]

BLAST of Carg13101 vs. ExPASy Swiss-Prot
Match: O64759 (Cationic amino acid transporter 5 OS=Arabidopsis thaliana OX=3702 GN=CAT5 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 4.8e-09
Identity = 43/111 (38.74%), Postives = 58/111 (52.25%), Query Frame = 0


Query: 10  LRIKVSFFPDVFNLLDPVTVVVLLVTDGIHMSGTRRTSFLTWIISVISSLLIVLFIVVGF 69
           LRIK       FNLLDP+ VVV+  +  I    TR+TS L WI S I++L+I   I+ GF
Sbjct: 183 LRIKTD-LSSGFNLLDPIAVVVIAASATIASISTRKTSLLNWIASAINTLVIFFVIIAGF 242

Query: 70  VGGVLQFCYPF-SLSVKGSCSCCLLV------FDMVASIVEEDKQPSRDVP 114
           +        PF     +G      +V      FD +A++ EE K PSRD+P
Sbjct: 243 IHADTSNLTPFLPFGPEGVFRAAAVVYFAYGGFDSIATMAEETKNPSRDIP 292

[Close]

BLAST of Carg13101 vs. ExPASy TrEMBL
Match: A0A6J1CNN6 (cationic amino acid transporter 8, vacuolar OS=Momordica charantia OX=3673 GN=LOC111012768 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 2.4e-24
Identity = 81/154 (52.60%), Postives = 97/154 (62.99%), Query Frame = 0


Query: 1   MINTDISDFLRIKVSFFPDVFNLLDPVTVVVLLVTDGIHMSGTRRTSFLTWIISVISSLL 60
           MINT+ SDFLRIKVS F D FNLLDP+ VVVLLV +GI MSGTRRTS LTWI SVISS +
Sbjct: 187 MINTNDSDFLRIKVSVFSDGFNLLDPIAVVVLLVANGIAMSGTRRTSLLTWITSVISSFI 246

Query: 61  IVLFIVVGFVGGVLQFCYP-FSLSVKGSCSCCLLV------FDMVASIVEEDKQPSRDVP 120
           IV  IVVGFV G      P F    KG+     +V      FDMVA++ EE K+PSRD+P
Sbjct: 247 IVFVIVVGFVRGSSANLVPFFPYGAKGAFRAAAVVYWSYTGFDMVATMAEETKRPSRDIP 306

Query: 121 -------DWINVYDLCVLVLDGIFIIKATKIYRD 141
                    I+V   C++ L    + K T+I R+
Sbjct: 307 VGLIGSMSMISVI-YCLMALSLTMLQKYTEIDRN 339

[Close]

BLAST of Carg13101 vs. ExPASy TrEMBL
Match: A0A6J1J3D3 (cationic amino acid transporter 8, vacuolar-like OS=Cucurbita maxima OX=3661 GN=LOC111483026 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 2.1e-23
Identity = 78/154 (50.65%), Postives = 95/154 (61.69%), Query Frame = 0


Query: 1   MINTDISDFLRIKVSFFPDVFNLLDPVTVVVLLVTDGIHMSGTRRTSFLTWIISVISSLL 60
           MINTD  DFLRIKV+F  + FNLLDP+ VVVLLV +GI MSGTRRTSFLTWI SV+S+ L
Sbjct: 188 MINTDNPDFLRIKVNFLSEGFNLLDPIAVVVLLVANGIAMSGTRRTSFLTWITSVLSTFL 247

Query: 61  IVLFIVVGFVGGVLQFCYP-FSLSVKGSCSCCLLV------FDMVASIVEEDKQPSRDVP 120
           I   IVVGF+ G      P F    KG      +V      FDMVA++ EE KQPSRD+P
Sbjct: 248 IFFVIVVGFMRGKSSNLVPFFPFGAKGVFRAAAVVYWSYTGFDMVATMAEETKQPSRDIP 307

Query: 121 -------DWINVYDLCVLVLDGIFIIKATKIYRD 141
                    I+V   C++ L    + K T+I R+
Sbjct: 308 VGLIGSMSMISVI-YCLMALSLTMLQKYTEIDRN 340

[Close]

BLAST of Carg13101 vs. ExPASy TrEMBL
Match: A0A6J1ETC2 (cationic amino acid transporter 8, vacuolar-like OS=Cucurbita moschata OX=3662 GN=LOC111437558 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 2.1e-23
Identity = 78/154 (50.65%), Postives = 95/154 (61.69%), Query Frame = 0


Query: 1   MINTDISDFLRIKVSFFPDVFNLLDPVTVVVLLVTDGIHMSGTRRTSFLTWIISVISSLL 60
           MINTD  DFLRIKV+F  + FNLLDP+ VVVLLV +GI MSGTRRTSFLTWI SV+S+ L
Sbjct: 188 MINTDNPDFLRIKVNFLSEGFNLLDPIAVVVLLVANGIAMSGTRRTSFLTWITSVLSTFL 247

Query: 61  IVLFIVVGFVGGVLQFCYP-FSLSVKGSCSCCLLV------FDMVASIVEEDKQPSRDVP 120
           I   IVVGF+ G      P F    KG      +V      FDMVA++ EE KQPSRD+P
Sbjct: 248 IFFVIVVGFMRGKSSNLVPFFPFGAKGVFRAAAVVYWSYTGFDMVATMAEETKQPSRDIP 307

Query: 121 -------DWINVYDLCVLVLDGIFIIKATKIYRD 141
                    I+V   C++ L    + K T+I R+
Sbjct: 308 VGLIGSMSMISVI-YCLMALSLTMLQKYTEIDRN 340

[Close]

BLAST of Carg13101 vs. ExPASy TrEMBL
Match: A0A5D3CWS7 (Cationic amino acid transporter 8, vacuolar OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G001150 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 1.3e-22
Identity = 68/120 (56.67%), Postives = 82/120 (68.33%), Query Frame = 0


Query: 1   MINTDISDFLRIKVSFFPDVFNLLDPVTVVVLLVTDGIHMSGTRRTSFLTWIISVISSLL 60
           MIN+D  DFLR KVSF  + FNLLDP+ V+VLLV +GI MSGTRRTSFLTWI SVIS+LL
Sbjct: 188 MINSDNPDFLRFKVSFLSEGFNLLDPIAVIVLLVANGIAMSGTRRTSFLTWITSVISTLL 247

Query: 61  IVLFIVVGFVGGVLQFCYP-FSLSVKGSCSCCLLV------FDMVASIVEEDKQPSRDVP 114
           I+  IV+GFV G      P F    +G      +V      FDMVA++ EE K+PSRD+P
Sbjct: 248 IIFVIVIGFVKGNSANLVPFFPYGARGVFRAAAVVYWSYTGFDMVATMAEETKKPSRDIP 307

[Close]

BLAST of Carg13101 vs. ExPASy TrEMBL
Match: A0A5A7V4N6 (Cationic amino acid transporter 8, vacuolar OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G001150 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 1.3e-22
Identity = 68/120 (56.67%), Postives = 82/120 (68.33%), Query Frame = 0


Query: 1   MINTDISDFLRIKVSFFPDVFNLLDPVTVVVLLVTDGIHMSGTRRTSFLTWIISVISSLL 60
           MIN+D  DFLR KVSF  + FNLLDP+ V+VLLV +GI MSGTRRTSFLTWI SVIS+LL
Sbjct: 188 MINSDNPDFLRFKVSFLSEGFNLLDPIAVIVLLVANGIAMSGTRRTSFLTWITSVISTLL 247

Query: 61  IVLFIVVGFVGGVLQFCYP-FSLSVKGSCSCCLLV------FDMVASIVEEDKQPSRDVP 114
           I+  IV+GFV G      P F    +G      +V      FDMVA++ EE K+PSRD+P
Sbjct: 248 IIFVIVIGFVKGNSANLVPFFPYGARGVFRAAAVVYWSYTGFDMVATMAEETKKPSRDIP 307

[Close]

BLAST of Carg13101 vs. TAIR 10
Match: AT1G17120.1 (cationic amino acid transporter 8 )

HSP 1 Score: 84.0 bits (206), Expect = 1.1e-16
Identity = 59/145 (40.69%), Postives = 81/145 (55.86%), Query Frame = 0


Query: 7   SDFLRIKVSFFPDVFNLLDPVTVVVLLVTDGIHMSGTRRTSFLTWIISVISSLLIVLFIV 66
           SD+ RIKV  F   F+LLDPV V VLLV +GI M+GT+RTS+L  I S+++  +IV  +V
Sbjct: 197 SDYFRIKVDSFAKGFDLLDPVAVAVLLVANGIAMTGTKRTSWLNLITSMVTVCIIVFIVV 256

Query: 67  VGFVGGVLQFCYP-FSLSVKGSCSCCLLV------FDMVASIVEEDKQPSRDVP------ 126
           VGF         P F    KG      +V      FDMVA++ EE ++PSRD+P      
Sbjct: 257 VGFTHSKTSNLVPFFPYGAKGVVQSAAVVYWSYTGFDMVANMAEETEKPSRDIPIGLVGS 316

Query: 127 -DWINVYDLCVLVLDGIFIIKATKI 138
              I V   C++ L    ++K T+I
Sbjct: 317 MSMITVV-YCLMALALTMMVKYTEI 340

[Close]

BLAST of Carg13101 vs. TAIR 10
Match: AT2G34960.1 (cationic amino acid transporter 5 )

HSP 1 Score: 62.4 bits (150), Expect = 3.4e-10
Identity = 43/111 (38.74%), Postives = 58/111 (52.25%), Query Frame = 0


Query: 10  LRIKVSFFPDVFNLLDPVTVVVLLVTDGIHMSGTRRTSFLTWIISVISSLLIVLFIVVGF 69
           LRIK       FNLLDP+ VVV+  +  I    TR+TS L WI S I++L+I   I+ GF
Sbjct: 183 LRIKTD-LSSGFNLLDPIAVVVIAASATIASISTRKTSLLNWIASAINTLVIFFVIIAGF 242

Query: 70  VGGVLQFCYPF-SLSVKGSCSCCLLV------FDMVASIVEEDKQPSRDVP 114
           +        PF     +G      +V      FD +A++ EE K PSRD+P
Sbjct: 243 IHADTSNLTPFLPFGPEGVFRAAAVVYFAYGGFDSIATMAEETKNPSRDIP 292

[Close]

BLAST of Carg13101 vs. TAIR 10
Match: AT3G10600.1 (cationic amino acid transporter 7 )

HSP 1 Score: 44.3 bits (103), Expect = 9.5e-05
Identity = 38/132 (28.79%), Postives = 65/132 (49.24%), Query Frame = 0


Query: 11  RIKVSFFPDVFNLLDPVTVVVLLVTDGIHMSGTRRTSFLTWIISVISSLLIVLFIVVGFV 70
           R  VS  P+ FN +DP+ V+V+L    +    TR +S +  +++ +    IV  IV+GF 
Sbjct: 176 RFIVSGLPNGFNEIDPIAVIVVLAVTFVICYSTRESSKVNMVLTALHIAFIVFVIVMGFS 235

Query: 71  GGVLQFC------------YPFSLS--VKGSCSCCL--LVFDMVASIVEEDKQPSRDVPD 127
            G ++              +PF +S    G+    L  + +D V+++ EE K P +D+P 
Sbjct: 236 KGDVKNLTRPDNPENPSGFFPFGVSGVFNGAAMVYLSYIGYDAVSTMAEEVKDPVKDIPM 295

[Close]

BLAST of Carg13101 vs. TAIR 10
Match: AT4G21120.1 (amino acid transporter 1 )

HSP 1 Score: 41.2 bits (95), Expect = 8.1e-04
Identity = 34/120 (28.33%), Postives = 61/120 (50.83%), Query Frame = 0


Query: 1   MINTDISDFLRIKVSFFPDVFNLLDPVTVVVLLVTDGIHMSGTRRTSFLTWIISVISSLL 60
           ++N    DF RI V    + ++ LDP+ V V  +   + + GT+ +S   +I S+I  ++
Sbjct: 181 LLNHKPEDF-RIIVHKLGEDYSHLDPIAVGVCAIICVLAVVGTKGSSRFNYIASIIHMVV 240

Query: 61  IVLFIVVGFVGGVLQFCYPFS-LSVKGSCSCCLLV------FDMVASIVEEDKQPSRDVP 114
           I+  I+ GF    ++    F+   V+G      ++      FD V+++ EE K P RD+P
Sbjct: 241 ILFVIIAGFTKADVKNYSDFTPYGVRGVFKSAAVLFFAYIGFDAVSTMAEETKNPGRDIP 299

The following BLAST results are available for this feature:

BLAST of Carg13101 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6600484.1	1.2e-70	100.00	Cationic amino acid transporter 8, vacuolar, partial [Cucurbita argyrosperma sub...	[more]
XP_022142722.1	5.0e-24	52.60	cationic amino acid transporter 8, vacuolar [Momordica charantia]	[more]
XP_038874912.1	1.1e-23	60.00	cationic amino acid transporter 8, vacuolar-like [Benincasa hispida]	[more]
XP_022984882.1	4.3e-23	50.65	cationic amino acid transporter 8, vacuolar-like [Cucurbita maxima]	[more]
XP_022931332.1	4.3e-23	50.65	cationic amino acid transporter 8, vacuolar-like [Cucurbita moschata] >XP_023552...	[more]

BLAST of Carg13101 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SHH0	1.5e-15	40.69	Cationic amino acid transporter 8, vacuolar OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
O64759	4.8e-09	38.74	Cationic amino acid transporter 5 OS=Arabidopsis thaliana OX=3702 GN=CAT5 PE=1 S...	[more]

BLAST of Carg13101 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CNN6	2.4e-24	52.60	cationic amino acid transporter 8, vacuolar OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A6J1J3D3	2.1e-23	50.65	cationic amino acid transporter 8, vacuolar-like OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1ETC2	2.1e-23	50.65	cationic amino acid transporter 8, vacuolar-like OS=Cucurbita moschata OX=3662 G...	[more]
A0A5D3CWS7	1.3e-22	56.67	Cationic amino acid transporter 8, vacuolar OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A5A7V4N6	1.3e-22	56.67	Cationic amino acid transporter 8, vacuolar OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of Carg13101 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G17120.1	1.1e-16	40.69	cationic amino acid transporter 8	[more]
AT2G34960.1	3.4e-10	38.74	cationic amino acid transporter 5	[more]
AT3G10600.1	9.5e-05	28.79	cationic amino acid transporter 7	[more]
AT4G21120.1	8.1e-04	28.33	amino acid transporter 1	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1740.10	Amino acid/polyamine transporter I	coord: 4..132 e-value: 2.4E-5 score: 25.2
None	No IPR available	PANTHER	PTHR43243:SF62	CATIONIC AMINO ACID TRANSPORTER 8, VACUOLAR	coord: 1..113
None	No IPR available	PANTHER	PTHR43243	INNER MEMBRANE TRANSPORTER YGJI-RELATED	coord: 1..113

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg13101-RA	Carg13101-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006865	amino acid transport
cellular_component	GO:0016020	membrane
molecular_function	GO:0022857	transmembrane transporter activity