Carg13035 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg13035
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Oxidative stress 3
Location	Carg_Chr10: 3109371 .. 3110363 (-)
RNA-Seq Expression	Carg13035
Synteny	Carg13035

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAAATTGCAAGAAAACCAGCAGCTTGGTGTTGATGGAGCTCAGAATAATGGGTGTTGCAGATGGATCACGGAAGATTGTGAAGCTTCAATGGAGTCTTCAATGGAGCTAAGTTCTGTAAATTCTGAAGCATCATCTTCTTCTTCTTCTTGTTCTTCTTCTTTGGATATGGTGGAAGATGCCATTTCTCCGGTTTCAAGTTCTTCATTTTCATCGTGTTCTTCAAATGGGCCTCTTTATGAGCTATCAGAGCTAATGGTTCATCTTCCTATGAAGTAAGTTATGGGATGAATAAAATCCTTTTTCCATTACCTTTTGAATTTTGATTGAAATAATTGTCAATTATGGATGGCTAATGGGGTTTTCTTTGATTTTTATGGCTATTTTGCAGGAGAGGGTTGTCTAGATATTATGATGGTAAATCAGAGTCTTTTACATCTCTAGCAAGTGTAGAAAGATTGGAAGATTTGGCTAAGAGGGTGTCTCCAATTACCAAAAAGTTCAAGTCTTGCAAGAGTTTTGATGGCCATCAATCCATTATTCCAAGGGCCACCATAGCCAAGAAAGCTTCGAGATCAAGAGGGAGAACTAGTTTGCTTTGTGGTTCTAGGTCTGCAATCCCTGTGAATGGCCACTGATTACTTTACTTGCTCGAGTTCAACGATTATGAGGTGGGAATCAAACATCGAGATAATTGGTGTCTTATCCATCGAATTAAGCTTGAATTCGTGCGTTCTTTACTAACCCTAAGCCATAATTTCCCCCTTTCTTATTTTTGTAAGGAAATTTGTTTCAACCTTCAATTGTAGATCGATGATTTTGCAATACTTGCGAGCTTTAAGGTGCTAACATGGATGACGGGTTGATTATTAAAGTTTTCTGGACGTTCCTGCCATCTTCCAATCTTAATCGAAATCATTTAAACATATAGAAACAAAATCAATAGATTGATGCGACATAAAGATAAGAGCCACCCTAAAAGTACATATA

mRNA sequence

ATGGGAAAATTGCAAGAAAACCAGCAGCTTGGTGTTGATGGAGCTCAGAATAATGGGTGTTGCAGATGGATCACGGAAGATTGTGAAGCTTCAATGGAGTCTTCAATGGAGCTAAGTTCTGTAAATTCTGAAGCATCATCTTCTTCTTCTTCTTGTTCTTCTTCTTTGGATATGGTGGAAGATGCCATTTCTCCGGTTTCAAGTTCTTCATTTTCATCGTGTTCTTCAAATGGGCCTCTTTATGAGCTATCAGAGCTAATGGTTCATCTTCCTATGAAGAGAGGGTTGTCTAGATATTATGATGGTAAATCAGAGTCTTTTACATCTCTAGCAAGTGTAGAAAGATTGGAAGATTTGGCTAAGAGGGTGTCTCCAATTACCAAAAAGTTCAAGTCTTGCAAGAGTTTTGATGGCCATCAATCCATTATTCCAAGGGCCACCATAGCCAAGAAAGCTTCGAGATCAAGAGGGAGAACTAGTTTGCTTTGTGGTTCTAGGTCTGCAATCCCTGTGAATGGCCACTGATTACTTTACTTGCTCGAGTTCAACGATTATGAGGTGGGAATCAAACATCGAGATAATTGGTGTCTTATCCATCGAATTAAGCTTGAATTCGTGCGTTCTTTACTAACCCTAAGCCATAATTTCCCCCTTTCTTATTTTTGTAAGGAAATTTGTTTCAACCTTCAATTGTAGATCGATGATTTTGCAATACTTGCGAGCTTTAAGGTGCTAACATGGATGACGGGTTGATTATTAAAGTTTTCTGGACGTTCCTGCCATCTTCCAATCTTAATCGAAATCATTTAAACATATAGAAACAAAATCAATAGATTGATGCGACATAAAGATAAGAGCCACCCTAAAAGTACATATA

Coding sequence (CDS)

ATGGGAAAATTGCAAGAAAACCAGCAGCTTGGTGTTGATGGAGCTCAGAATAATGGGTGTTGCAGATGGATCACGGAAGATTGTGAAGCTTCAATGGAGTCTTCAATGGAGCTAAGTTCTGTAAATTCTGAAGCATCATCTTCTTCTTCTTCTTGTTCTTCTTCTTTGGATATGGTGGAAGATGCCATTTCTCCGGTTTCAAGTTCTTCATTTTCATCGTGTTCTTCAAATGGGCCTCTTTATGAGCTATCAGAGCTAATGGTTCATCTTCCTATGAAGAGAGGGTTGTCTAGATATTATGATGGTAAATCAGAGTCTTTTACATCTCTAGCAAGTGTAGAAAGATTGGAAGATTTGGCTAAGAGGGTGTCTCCAATTACCAAAAAGTTCAAGTCTTGCAAGAGTTTTGATGGCCATCAATCCATTATTCCAAGGGCCACCATAGCCAAGAAAGCTTCGAGATCAAGAGGGAGAACTAGTTTGCTTTGTGGTTCTAGGTCTGCAATCCCTGTGAATGGCCACTGA

Protein sequence

MGKLQENQQLGVDGAQNNGCCRWITEDCEASMESSMELSSVNSEASSSSSSCSSSLDMVEDAISPVSSSSFSSCSSNGPLYELSELMVHLPMKRGLSRYYDGKSESFTSLASVERLEDLAKRVSPITKKFKSCKSFDGHQSIIPRATIAKKASRSRGRTSLLCGSRSAIPVNGH

Homology

[Close]

BLAST of Carg13035 vs. NCBI nr
Match: KAG7023622.1 (hypothetical protein SDJN02_14648, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 328.9 bits (842), Expect = 2.6e-86
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0


Query: 1   MGKLQENQQLGVDGAQNNGCCRWITEDCEASMESSMELSSVNSEASSSSSSCSSSLDMVE 60
           MGKLQENQQLGVDGAQNNGCCRWITEDCEASMESSMELSSVNSEASSSSSSCSSSLDMVE
Sbjct: 1   MGKLQENQQLGVDGAQNNGCCRWITEDCEASMESSMELSSVNSEASSSSSSCSSSLDMVE 60

Query: 61  DAISPVSSSSFSSCSSNGPLYELSELMVHLPMKRGLSRYYDGKSESFTSLASVERLEDLA 120
           DAISPVSSSSFSSCSSNGPLYELSELMVHLPMKRGLSRYYDGKSESFTSLASVERLEDLA
Sbjct: 61  DAISPVSSSSFSSCSSNGPLYELSELMVHLPMKRGLSRYYDGKSESFTSLASVERLEDLA 120

Query: 121 KRVSPITKKFKSCKSFDGHQSIIPRATIAKKASRSRGRTSLLCGSRSAIPVNGH 175
           KRVSPITKKFKSCKSFDGHQSIIPRATIAKKASRSRGRTSLLCGSRSAIPVNGH
Sbjct: 121 KRVSPITKKFKSCKSFDGHQSIIPRATIAKKASRSRGRTSLLCGSRSAIPVNGH 174

[Close]

BLAST of Carg13035 vs. NCBI nr
Match: KAG6589960.1 (hypothetical protein SDJN03_15383, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 321.2 bits (822), Expect = 5.4e-84
Identity = 170/174 (97.70%), Postives = 171/174 (98.28%), Query Frame = 0


Query: 1   MGKLQENQQLGVDGAQNNGCCRWITEDCEASMESSMELSSVNSEASSSSSSCSSSLDMVE 60
           MGKLQENQQLGVDGAQNNGCCRWITEDCEASMESSME SSVNSEASSSS SCS SLDMVE
Sbjct: 1   MGKLQENQQLGVDGAQNNGCCRWITEDCEASMESSMERSSVNSEASSSSCSCSCSLDMVE 60

Query: 61  DAISPVSSSSFSSCSSNGPLYELSELMVHLPMKRGLSRYYDGKSESFTSLASVERLEDLA 120
           DAISPVSSSSFSSCSSNGPLYELSELMVHLPMKRGLSRYYDGKSESFTSLASVERLEDLA
Sbjct: 61  DAISPVSSSSFSSCSSNGPLYELSELMVHLPMKRGLSRYYDGKSESFTSLASVERLEDLA 120

Query: 121 KRVSPITKKFKSCKSFDGHQSIIPRATIAKKASRSRGRTSLLCGSRSAIPVNGH 175
           KRVSPITKKFKSCKSFDGH+SIIPRATIAKKASRSRGRTSLLCGSRSAIPVNGH
Sbjct: 121 KRVSPITKKFKSCKSFDGHKSIIPRATIAKKASRSRGRTSLLCGSRSAIPVNGH 174

[Close]

BLAST of Carg13035 vs. NCBI nr
Match: XP_022960918.1 (uncharacterized protein LOC111461578 [Cucurbita moschata])

HSP 1 Score: 318.9 bits (816), Expect = 2.7e-83
Identity = 172/175 (98.29%), Postives = 173/175 (98.86%), Query Frame = 0


Query: 1   MGKLQENQQLGVDGAQNNGCCRWITEDCEASMESSMELSSVNSEA-SSSSSSCSSSLDMV 60
           MGKLQENQQLGVDGAQNNGCCRWITEDCEASMESSMELSSVNSEA SSSSSS SSSLDMV
Sbjct: 1   MGKLQENQQLGVDGAQNNGCCRWITEDCEASMESSMELSSVNSEASSSSSSSSSSSLDMV 60

Query: 61  EDAISPVSSSSFSSCSSNGPLYELSELMVHLPMKRGLSRYYDGKSESFTSLASVERLEDL 120
           EDAISPVSSSSFSSCSSNGPLYELSELMVHLPMKRGLSRYYDGKSESFTSLASVERLEDL
Sbjct: 61  EDAISPVSSSSFSSCSSNGPLYELSELMVHLPMKRGLSRYYDGKSESFTSLASVERLEDL 120

Query: 121 AKRVSPITKKFKSCKSFDGHQSIIPRATIAKKASRSRGRTSLLCGSRSAIPVNGH 175
           AKRVSPITKKFKSCKSFDGH+SIIPRATIAKKASRSRGRTSLLCGSRSAIPVNGH
Sbjct: 121 AKRVSPITKKFKSCKSFDGHKSIIPRATIAKKASRSRGRTSLLCGSRSAIPVNGH 175

[Close]

BLAST of Carg13035 vs. NCBI nr
Match: XP_023516067.1 (uncharacterized protein DDB_G0271670-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 313.9 bits (803), Expect = 8.5e-82
Identity = 170/180 (94.44%), Postives = 173/180 (96.11%), Query Frame = 0


Query: 1   MGKLQENQQLGVDGAQNNGCCRWITEDCEASMESSMELSSVNSEA------SSSSSSCSS 60
           MGKLQENQQLGVDGAQ+NGCCRWITEDCEASMESSMELSSVNSEA      SSSSSS SS
Sbjct: 1   MGKLQENQQLGVDGAQSNGCCRWITEDCEASMESSMELSSVNSEASSSSSSSSSSSSSSS 60

Query: 61  SLDMVEDAISPVSSSSFSSCSSNGPLYELSELMVHLPMKRGLSRYYDGKSESFTSLASVE 120
           SLDMVEDAISPVSSSSFSSCSSNGPLYELSELMVHLPMKRGLS+YYDGKSESFTSLASVE
Sbjct: 61  SLDMVEDAISPVSSSSFSSCSSNGPLYELSELMVHLPMKRGLSKYYDGKSESFTSLASVE 120

Query: 121 RLEDLAKRVSPITKKFKSCKSFDGHQSIIPRATIAKKASRSRGRTSLLCGSRSAIPVNGH 175
           RLEDLAKRVSPITKKFKSCKSFDGH+SIIPRATIAKKASRSRGRTSLLCGSRSAIPVNGH
Sbjct: 121 RLEDLAKRVSPITKKFKSCKSFDGHKSIIPRATIAKKASRSRGRTSLLCGSRSAIPVNGH 180

[Close]

BLAST of Carg13035 vs. NCBI nr
Match: XP_022987891.1 (uncharacterized protein LOC111485297 [Cucurbita maxima])

HSP 1 Score: 272.3 bits (695), Expect = 2.9e-69
Identity = 151/174 (86.78%), Postives = 154/174 (88.51%), Query Frame = 0


Query: 1   MGKLQENQQLGVDGAQNNGCCRWITEDCEASMESSMELSSVNSEASSSSSSCSSSLDMVE 60
           MGKLQENQQLGVDGAQNNGCCRWITEDC            VNSEASSSSSS SSSLDMVE
Sbjct: 1   MGKLQENQQLGVDGAQNNGCCRWITEDC-----------GVNSEASSSSSS-SSSLDMVE 60

Query: 61  DAISPVSSSSFSSCSSNGPLYELSELMVHLPMKRGLSRYYDGKSESFTSLASVERLEDLA 120
           DA+SPV+S      SSNGPLYELSELMVHLPMKRGLSRYYDGKSESFTSLASVERLEDLA
Sbjct: 61  DAVSPVTS------SSNGPLYELSELMVHLPMKRGLSRYYDGKSESFTSLASVERLEDLA 120

Query: 121 KRVSPITKKFKSCKSFDGHQSIIPRATIAKKASRSRGRTSLLCGSRSAIPVNGH 175
           KRVSPITKKFKSCKSFDGH+SIIPRA IAKKASRSRGRTSLLCGSRSAIPVNGH
Sbjct: 121 KRVSPITKKFKSCKSFDGHKSIIPRANIAKKASRSRGRTSLLCGSRSAIPVNGH 156

[Close]

BLAST of Carg13035 vs. ExPASy TrEMBL
Match: A0A6J1HAD2 (uncharacterized protein LOC111461578 OS=Cucurbita moschata OX=3662 GN=LOC111461578 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.3e-83
Identity = 172/175 (98.29%), Postives = 173/175 (98.86%), Query Frame = 0


Query: 1   MGKLQENQQLGVDGAQNNGCCRWITEDCEASMESSMELSSVNSEA-SSSSSSCSSSLDMV 60
           MGKLQENQQLGVDGAQNNGCCRWITEDCEASMESSMELSSVNSEA SSSSSS SSSLDMV
Sbjct: 1   MGKLQENQQLGVDGAQNNGCCRWITEDCEASMESSMELSSVNSEASSSSSSSSSSSLDMV 60

Query: 61  EDAISPVSSSSFSSCSSNGPLYELSELMVHLPMKRGLSRYYDGKSESFTSLASVERLEDL 120
           EDAISPVSSSSFSSCSSNGPLYELSELMVHLPMKRGLSRYYDGKSESFTSLASVERLEDL
Sbjct: 61  EDAISPVSSSSFSSCSSNGPLYELSELMVHLPMKRGLSRYYDGKSESFTSLASVERLEDL 120

Query: 121 AKRVSPITKKFKSCKSFDGHQSIIPRATIAKKASRSRGRTSLLCGSRSAIPVNGH 175
           AKRVSPITKKFKSCKSFDGH+SIIPRATIAKKASRSRGRTSLLCGSRSAIPVNGH
Sbjct: 121 AKRVSPITKKFKSCKSFDGHKSIIPRATIAKKASRSRGRTSLLCGSRSAIPVNGH 175

[Close]

BLAST of Carg13035 vs. ExPASy TrEMBL
Match: A0A6J1JFM4 (uncharacterized protein LOC111485297 OS=Cucurbita maxima OX=3661 GN=LOC111485297 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.4e-69
Identity = 151/174 (86.78%), Postives = 154/174 (88.51%), Query Frame = 0


Query: 1   MGKLQENQQLGVDGAQNNGCCRWITEDCEASMESSMELSSVNSEASSSSSSCSSSLDMVE 60
           MGKLQENQQLGVDGAQNNGCCRWITEDC            VNSEASSSSSS SSSLDMVE
Sbjct: 1   MGKLQENQQLGVDGAQNNGCCRWITEDC-----------GVNSEASSSSSS-SSSLDMVE 60

Query: 61  DAISPVSSSSFSSCSSNGPLYELSELMVHLPMKRGLSRYYDGKSESFTSLASVERLEDLA 120
           DA+SPV+S      SSNGPLYELSELMVHLPMKRGLSRYYDGKSESFTSLASVERLEDLA
Sbjct: 61  DAVSPVTS------SSNGPLYELSELMVHLPMKRGLSRYYDGKSESFTSLASVERLEDLA 120

Query: 121 KRVSPITKKFKSCKSFDGHQSIIPRATIAKKASRSRGRTSLLCGSRSAIPVNGH 175
           KRVSPITKKFKSCKSFDGH+SIIPRA IAKKASRSRGRTSLLCGSRSAIPVNGH
Sbjct: 121 KRVSPITKKFKSCKSFDGHKSIIPRANIAKKASRSRGRTSLLCGSRSAIPVNGH 156

[Close]

BLAST of Carg13035 vs. ExPASy TrEMBL
Match: A0A6J1EUM1 (uncharacterized protein LOC111438035 OS=Cucurbita moschata OX=3662 GN=LOC111438035 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 9.9e-60
Identity = 139/179 (77.65%), Postives = 151/179 (84.36%), Query Frame = 0


Query: 1   MGKLQENQQLGVDGAQNNGCCRWITEDCEASMESSMELSSVNSEASSSSSSCSSSLDMVE 60
           MG+LQE Q+L VD AQ +GCCR I EDCEASMESSME SS NSEA       SSS++MVE
Sbjct: 1   MGELQETQRLYVDEAQ-SGCCRTIMEDCEASMESSMEFSSANSEA-------SSSMEMVE 60

Query: 61  DAISPVSSSSF-SSCSSNGPLYELSELMVHLPMKRGLSRYYDGKSESFTSLASVERLEDL 120
           DA+S VS+SS  SS SSNGPL+ELSELMVHLPMKRGLS+YYDGKSESFTSLASVERLEDL
Sbjct: 61  DALSTVSNSSLSSSSSSNGPLFELSELMVHLPMKRGLSKYYDGKSESFTSLASVERLEDL 120

Query: 121 AKRVSPITKKFKSCKS----FDGHQSIIPRATIAKKASRSRGRTSLLCGSRSAIPVNGH 175
           AKRVSPI KKFKSC S    FDGH+SIIPRATIAKKASRSRG+ SLLCGSRSA+ VN H
Sbjct: 121 AKRVSPIRKKFKSCMSVGGGFDGHKSIIPRATIAKKASRSRGKRSLLCGSRSAVSVNWH 171

[Close]

BLAST of Carg13035 vs. ExPASy TrEMBL
Match: A0A6J1KT99 (uncharacterized protein LOC111498459 OS=Cucurbita maxima OX=3661 GN=LOC111498459 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 3.8e-59
Identity = 136/179 (75.98%), Postives = 150/179 (83.80%), Query Frame = 0


Query: 1   MGKLQENQQLGVDGAQNNGCCRWITEDCEASMESSMELSSVNSEASSSSSSCSSSLDMVE 60
           MG+LQE Q+L VD AQ +GCCR I EDCEASMESSME SS NSEA       SSSL+MVE
Sbjct: 1   MGELQETQRLYVDEAQ-SGCCRTIMEDCEASMESSMEFSSANSEA-------SSSLEMVE 60

Query: 61  DAISPVSSSSF-SSCSSNGPLYELSELMVHLPMKRGLSRYYDGKSESFTSLASVERLEDL 120
           DA+S VS SS  SS SSNGPL+ELSELMVHLPMKRGLS+YYDGKSESFTSLASVERLEDL
Sbjct: 61  DALSTVSDSSLSSSSSSNGPLFELSELMVHLPMKRGLSKYYDGKSESFTSLASVERLEDL 120

Query: 121 AKRVSPITKKFKSCKS----FDGHQSIIPRATIAKKASRSRGRTSLLCGSRSAIPVNGH 175
           AKRV PI KKFKSCKS    FDGH+SI+PRAT+AKKASRSRG++SL+CGSRS + VN H
Sbjct: 121 AKRVCPIRKKFKSCKSVGGGFDGHKSIVPRATLAKKASRSRGKSSLICGSRSVVSVNWH 171

[Close]

BLAST of Carg13035 vs. ExPASy TrEMBL
Match: A0A6J1CTH8 (uncharacterized protein LOC111014601 OS=Momordica charantia OX=3673 GN=LOC111014601 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 7.6e-52
Identity = 134/180 (74.44%), Postives = 142/180 (78.89%), Query Frame = 0


Query: 1   MGKLQENQQLGVDGAQNNGCCRWI-TEDCEASMESSMELSSVNSEASSSSSSCSSSLDMV 60
           MGKLQENQ     G+Q NGCCR I  ED EASMESSME SS  S+A       SSSLDMV
Sbjct: 1   MGKLQENQ----PGSQ-NGCCRAIMEEDFEASMESSMEFSSEISDA-------SSSLDMV 60

Query: 61  -EDAISPVSSSSFSSCSSNGPLYELSELMVHLPMKRGLSRYYDGKSESFTSLASVERLED 120
            ED +SP S+SS SS SSNGP YELSELM HLPMKRGLS+YYDGKSESFTSLASV RLED
Sbjct: 61  EEDVLSPTSNSSLSSSSSNGPFYELSELMAHLPMKRGLSKYYDGKSESFTSLASVVRLED 120

Query: 121 LAKRVSPITKKFKSCKS----FDGHQSIIPRATIAKKASRSRGRTSLLCGSRSAIPVNGH 175
           LAKRVSPI KK KSCKS    FD H+SIIPRATIAKKASRSR +TSLL GSRSAI VNG+
Sbjct: 121 LAKRVSPIRKKMKSCKSFGGGFDAHKSIIPRATIAKKASRSRRKTSLLSGSRSAISVNGN 168

[Close]

BLAST of Carg13035 vs. TAIR 10
Match: AT5G56550.1 (oxidative stress 3 )

HSP 1 Score: 85.5 bits (210), Expect = 4.6e-17
Identity = 59/128 (46.09%), Postives = 78/128 (60.94%), Query Frame = 0


Query: 37  ELSSVNSEASSSSSSCSSSLDMVEDAISPVSSSSFSSCSSNGPLYELSELMVHLPMKRGL 96
           E+S+  S+   +SSSCS S  M  D          SS SSNGPL +LS+LM HLP+KRGL
Sbjct: 32  EVSTTFSDEEDNSSSCSLSSSMCSDFTEDDDDDDVSSSSSNGPLEDLSDLMSHLPIKRGL 91

Query: 97  SRYYDGKSESFTSLASVERLEDLAKR---VSPITKKFKSCKSFDG------HQSIIPRAT 156
           S++Y+GKS+SFTSL +V+ LEDL KR         K KS +S  G       +   P+AT
Sbjct: 92  SKFYEGKSQSFTSLGNVKSLEDLMKRGFKSRNYGAKRKSSRSTGGILDQSYKRVFSPKAT 151

[Close]

BLAST of Carg13035 vs. TAIR 10
Match: AT4G26288.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: oxidative stress 3 (TAIR:AT5G56550.1); Has 289 Blast hits to 232 proteins in 41 species: Archae - 0; Bacteria - 12; Metazoa - 36; Fungi - 21; Plants - 151; Viruses - 2; Other Eukaryotes - 67 (source: NCBI BLink). )

HSP 1 Score: 76.6 bits (187), Expect = 2.1e-14
Identity = 62/132 (46.97%), Postives = 82/132 (62.12%), Query Frame = 0


Query: 33  ESSMELSSVNSEASSSSSSCSSSLDMVEDAISPVSSSSFSSCSSNGPLYELSELMVHLPM 92
           E  + +S  +++ SSSSS    S D+ EDA    SSSS SS SSNGP  +LS+L+  LP+
Sbjct: 16  EGVIGVSGSSAKVSSSSSISMCSSDLTEDA---SSSSSSSSSSSNGPFDDLSDLISQLPI 75

Query: 93  ----KRGLSRYYDGKSESFTSLASVERLEDLAKRVSPITKKFKSCKSFDGHQSIIPRATI 152
               K GLS+YY GKS+SFTSLA+V  L+DL KR S    + KSC   D      P+ATI
Sbjct: 76  IQVKKGGLSKYYKGKSQSFTSLANVTSLQDLVKRGS----RTKSCCKRDYFYG--PKATI 135

Query: 153 AKKASRSRGRTS 161
           + KA+R+  + S
Sbjct: 136 SMKATRTSSKHS 138

[Close]

BLAST of Carg13035 vs. TAIR 10
Match: AT5G21940.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G43850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 48.1 bits (113), Expect = 8.1e-06
Identity = 44/139 (31.65%), Postives = 67/139 (48.20%), Query Frame = 0


Query: 40  SVNSEASSSSSSCSSSLDMVEDAISPVSSSSFSSCSSN-------GPLYELSELMVHLPM 99
           S +  +SS SSS SSS+    D     S         N       GPL  +  L   LP+
Sbjct: 28  SPSDSSSSPSSSASSSIGRNSDDGEKSSEDGGDDAGENEVESPYKGPLEMMESLEQVLPV 87

Query: 100 KRGLSRYYDGKSESFT--------SLASVERLEDLAKRVSPITKKFKS--CKSFDGHQSI 159
           ++G+S+YY GKS+SFT        +L S   ++DLAK  +P +++ ++  C     +   
Sbjct: 88  RKGISKYYSGKSKSFTNLTAEAASALTSSSSMKDLAKPENPYSRRRRNLLCHQIWENNKT 147

Query: 160 IPRATIAKKASRSRGRTSL 162
            PR  I+KK   S  R++L
Sbjct: 148 TPRGGISKKHVMSSSRSAL 166

The following BLAST results are available for this feature:

BLAST of Carg13035 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7023622.1	2.6e-86	100.00	hypothetical protein SDJN02_14648, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6589960.1	5.4e-84	97.70	hypothetical protein SDJN03_15383, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022960918.1	2.7e-83	98.29	uncharacterized protein LOC111461578 [Cucurbita moschata]	[more]
XP_023516067.1	8.5e-82	94.44	uncharacterized protein DDB_G0271670-like [Cucurbita pepo subsp. pepo]	[more]
XP_022987891.1	2.9e-69	86.78	uncharacterized protein LOC111485297 [Cucurbita maxima]	[more]

BLAST of Carg13035 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg13035 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HAD2	1.3e-83	98.29	uncharacterized protein LOC111461578 OS=Cucurbita moschata OX=3662 GN=LOC1114615...	[more]
A0A6J1JFM4	1.4e-69	86.78	uncharacterized protein LOC111485297 OS=Cucurbita maxima OX=3661 GN=LOC111485297...	[more]
A0A6J1EUM1	9.9e-60	77.65	uncharacterized protein LOC111438035 OS=Cucurbita moschata OX=3662 GN=LOC1114380...	[more]
A0A6J1KT99	3.8e-59	75.98	uncharacterized protein LOC111498459 OS=Cucurbita maxima OX=3661 GN=LOC111498459...	[more]
A0A6J1CTH8	7.6e-52	74.44	uncharacterized protein LOC111014601 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]

BLAST of Carg13035 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G56550.1	4.6e-17	46.09	oxidative stress 3	[more]
AT4G26288.1	2.1e-14	46.97	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT5G21940.1	8.1e-06	31.65	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33172:SF68	SUBFAMILY NOT NAMED	coord: 29..174
None	No IPR available	PANTHER	PTHR33172	OS08G0516900 PROTEIN	coord: 29..174

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg13035-RA	Carg13035-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0000166	nucleotide binding