Carg13006 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg13006
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionTranscription factor
LocationCarg_Chr10: 3248086 .. 3249678 (+)
RNA-Seq ExpressionCarg13006
SyntenyCarg13006
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCAGGAAGTGCTCACATTGTGGCAACATAGGTCACAATTCAAGGACTTGCACCAACTTTAGACCCTCAATCACACCCAATTTCAACGTTGGTAGTGGCTTAATTAGGCTCTTTGGAGTTCATCTTGATTCCTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCTTCTTCCTCTTCTACTACTACTTCTTCAAGTGCTGCTGCTTTCGCCATTAAGAAAAGCTTTAGCACCGATTGCTTGTCGTCGTCGTCGTCGTCGTCTTTCTCTACTTCTCGAATTCAAATCGATCATAATCTTGAACCTTCCAAGCCCACCAATGGCTATCTCTCTGATGGCCTTCTCAATGGAGACCAAGAAAGGAAGAAAGGTAAGGTTTTTATCATTTGGGTCTCTTCAAAATTCAATCTTTTTGTGTTTTCTTTGGTCAAGTTTTGATTTTTAGCCTCTTTCCTTTCTGGGTTTTCAATGTTTTGAAGATTTGAGGCTTTTTTTTACTTGGGTTTTTGGTGGTTGATTGATCATACCCTTAATTTTAAGCTTAATAATCATATTTTTTTGGGATGAACTGTTCTTAGGGGTTCCATGGACAGAAGAGGAACACAGAATATTCCTAATTGGGCTTGAAAAGCTTGGAAGAGGAGATTGGAGAGGCATCTCGAGAAACTACGTCACGACGAAAACTCCGACCCAAGTGGCTAGTCACGCTCAAAAGTATTTTCTTAGACAATCGACCGTCAACAAAAAGAACCGTCGCTCGAGCCTCTTCAACATGGTATTCTTCATTTCATTTGGATAGGTATTTTTTCTCATAATCTATACCAAAAATTACACAATTTAGATTTGTTTTGTGTTGGAATACAGGTTGGGACAGCATATGATACAACAACGACAGCACTGTCTCAATGTTTGAAGATATCTTCAAATTCTCAAACTCATAGCAATAAGAATGAGATGAATATCAAGAAGGAGCTGAATTTGCCTCTTTTAGAGAGTAAAATCACCACTACTTTTGCAAGCTCCCAACAATTGGGTTCTTCCATGGAAGTGATGAACAACAATAATCAAGCTTCTTCTTCTTCATCATCAATTTGGCTTTATGGGTTGATTGATTCACAACTCAAATCAGCTTCTCAAACCATGATTTGTTCTTCATCTTCTGGAGCAGGTGGGCCAGATCTTGAGCTCACTTTGGCAGCCCCAAGAGCTTCCAATTTGGAGTATGAACAAACCAAAAAGGCATCAACTGGTTCCCTCCTTGTTGACCCAATCAGGGTTCCCTAATTACTAATCAAACCCATCCCCAAAAATTCAATATCCAGCAAGAAATAACACAAAGACATATTGTTCTTCATGATTACAGTGTTTAATTTGGTTGTTTTATGATCAGCTTCCTTACTGAAAGTGACAAATTTATATATATGTTATTCGTCTTAATTTGTTTAGCTATAGCCTATGCTCGAGAAGAAGCACAAAGGTTGTAAAATGGCTCTTTAATGTCTTAATCCGTTTAGCTATGCTTGAAAAGAAGCACAAAGTTTGTAAAATGACTCTTTAATGTCTTATTAGTTTAGCTATACTCGAAAAGAAGCA

mRNA sequence

ATGGGCAGGAAGTGCTCACATTGTGGCAACATAGGTCACAATTCAAGGACTTGCACCAACTTTAGACCCTCAATCACACCCAATTTCAACGTTGGTAGTGGCTTAATTAGGCTCTTTGGAGTTCATCTTGATTCCTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCTTCTTCCTCTTCTACTACTACTTCTTCAAGTGCTGCTGCTTTCGCCATTAAGAAAAGCTTTAGCACCGATTGCTTGTCGTCGTCGTCGTCGTCGTCTTTCTCTACTTCTCGAATTCAAATCGATCATAATCTTGAACCTTCCAAGCCCACCAATGGCTATCTCTCTGATGGCCTTCTCAATGGAGACCAAGAAAGGAAGAAAGGGGTTCCATGGACAGAAGAGGAACACAGAATATTCCTAATTGGGCTTGAAAAGCTTGGAAGAGGAGATTGGAGAGGCATCTCGAGAAACTACGTCACGACGAAAACTCCGACCCAAGTGGCTAGTCACGCTCAAAAGTATTTTCTTAGACAATCGACCGTCAACAAAAAGAACCGTCGCTCGAGCCTCTTCAACATGGTTGGGACAGCATATGATACAACAACGACAGCACTGTCTCAATGTTTGAAGATATCTTCAAATTCTCAAACTCATAGCAATAAGAATGAGATGAATATCAAGAAGGAGCTGAATTTGCCTCTTTTAGAGAGTAAAATCACCACTACTTTTGCAAGCTCCCAACAATTGGGTTCTTCCATGGAAGTGATGAACAACAATAATCAAGCTTCTTCTTCTTCATCATCAATTTGGCTTTATGGGTTGATTGATTCACAACTCAAATCAGCTTCTCAAACCATGATTTGTTCTTCATCTTCTGGAGCAGGTGGGCCAGATCTTGAGCTCACTTTGGCAGCCCCAAGAGCTTCCAATTTGGAGTATGAACAAACCAAAAAGGCATCAACTGGTTCCCTCCTTGTTGACCCAATCAGGGTTCCCTAATTACTAATCAAACCCATCCCCAAAAATTCAATATCCAGCAAGAAATAACACAAAGACATATTGTTCTTCATGATTACAGTGTTTAATTTGGTTGTTTTATGATCAGCTTCCTTACTGAAAGTGACAAATTTATATATATGTTATTCGTCTTAATTTGTTTAGCTATAGCCTATGCTCGAGAAGAAGCACAAAGGTTGTAAAATGGCTCTTTAATGTCTTAATCCGTTTAGCTATGCTTGAAAAGAAGCACAAAGTTTGTAAAATGACTCTTTAATGTCTTATTAGTTTAGCTATACTCGAAAAGAAGCA

Coding sequence (CDS)

ATGGGCAGGAAGTGCTCACATTGTGGCAACATAGGTCACAATTCAAGGACTTGCACCAACTTTAGACCCTCAATCACACCCAATTTCAACGTTGGTAGTGGCTTAATTAGGCTCTTTGGAGTTCATCTTGATTCCTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCTTCTTCCTCTTCTACTACTACTTCTTCAAGTGCTGCTGCTTTCGCCATTAAGAAAAGCTTTAGCACCGATTGCTTGTCGTCGTCGTCGTCGTCGTCTTTCTCTACTTCTCGAATTCAAATCGATCATAATCTTGAACCTTCCAAGCCCACCAATGGCTATCTCTCTGATGGCCTTCTCAATGGAGACCAAGAAAGGAAGAAAGGGGTTCCATGGACAGAAGAGGAACACAGAATATTCCTAATTGGGCTTGAAAAGCTTGGAAGAGGAGATTGGAGAGGCATCTCGAGAAACTACGTCACGACGAAAACTCCGACCCAAGTGGCTAGTCACGCTCAAAAGTATTTTCTTAGACAATCGACCGTCAACAAAAAGAACCGTCGCTCGAGCCTCTTCAACATGGTTGGGACAGCATATGATACAACAACGACAGCACTGTCTCAATGTTTGAAGATATCTTCAAATTCTCAAACTCATAGCAATAAGAATGAGATGAATATCAAGAAGGAGCTGAATTTGCCTCTTTTAGAGAGTAAAATCACCACTACTTTTGCAAGCTCCCAACAATTGGGTTCTTCCATGGAAGTGATGAACAACAATAATCAAGCTTCTTCTTCTTCATCATCAATTTGGCTTTATGGGTTGATTGATTCACAACTCAAATCAGCTTCTCAAACCATGATTTGTTCTTCATCTTCTGGAGCAGGTGGGCCAGATCTTGAGCTCACTTTGGCAGCCCCAAGAGCTTCCAATTTGGAGTATGAACAAACCAAAAAGGCATCAACTGGTTCCCTCCTTGTTGACCCAATCAGGGTTCCCTAA

Protein sequence

MGRKCSHCGNIGHNSRTCTNFRPSITPNFNVGSGLIRLFGVHLDSSSSSSSSSSSSSSSSTTTSSSAAAFAIKKSFSTDCLSSSSSSSFSTSRIQIDHNLEPSKPTNGYLSDGLLNGDQERKKGVPWTEEEHRIFLIGLEKLGRGDWRGISRNYVTTKTPTQVASHAQKYFLRQSTVNKKNRRSSLFNMVGTAYDTTTTALSQCLKISSNSQTHSNKNEMNIKKELNLPLLESKITTTFASSQQLGSSMEVMNNNNQASSSSSSIWLYGLIDSQLKSASQTMICSSSSGAGGPDLELTLAAPRASNLEYEQTKKASTGSLLVDPIRVP
Homology
[Close]
BLAST of Carg13006 vs. NCBI nr
Match: KAG7023651.1 (Transcription factor MYBS3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 608.6 bits (1568), Expect = 3.2e-170
Identity = 328/328 (100.00%), Postives = 328/328 (100.00%), Query Frame = 0 

Query: 1   MGRKCSHCGNIGHNSRTCTNFRPSITPNFNVGSGLIRLFGVHLDSSSSSSSSSSSSSSSS 60
           MGRKCSHCGNIGHNSRTCTNFRPSITPNFNVGSGLIRLFGVHLDSSSSSSSSSSSSSSSS
Sbjct: 1   MGRKCSHCGNIGHNSRTCTNFRPSITPNFNVGSGLIRLFGVHLDSSSSSSSSSSSSSSSS 60

Query: 61  TTTSSSAAAFAIKKSFSTDCLSSSSSSSFSTSRIQIDHNLEPSKPTNGYLSDGLLNGDQE 120
           TTTSSSAAAFAIKKSFSTDCLSSSSSSSFSTSRIQIDHNLEPSKPTNGYLSDGLLNGDQE
Sbjct: 61  TTTSSSAAAFAIKKSFSTDCLSSSSSSSFSTSRIQIDHNLEPSKPTNGYLSDGLLNGDQE 120

Query: 121 RKKGVPWTEEEHRIFLIGLEKLGRGDWRGISRNYVTTKTPTQVASHAQKYFLRQSTVNKK 180
           RKKGVPWTEEEHRIFLIGLEKLGRGDWRGISRNYVTTKTPTQVASHAQKYFLRQSTVNKK
Sbjct: 121 RKKGVPWTEEEHRIFLIGLEKLGRGDWRGISRNYVTTKTPTQVASHAQKYFLRQSTVNKK 180

Query: 181 NRRSSLFNMVGTAYDTTTTALSQCLKISSNSQTHSNKNEMNIKKELNLPLLESKITTTFA 240
           NRRSSLFNMVGTAYDTTTTALSQCLKISSNSQTHSNKNEMNIKKELNLPLLESKITTTFA
Sbjct: 181 NRRSSLFNMVGTAYDTTTTALSQCLKISSNSQTHSNKNEMNIKKELNLPLLESKITTTFA 240

Query: 241 SSQQLGSSMEVMNNNNQASSSSSSIWLYGLIDSQLKSASQTMICSSSSGAGGPDLELTLA 300
           SSQQLGSSMEVMNNNNQASSSSSSIWLYGLIDSQLKSASQTMICSSSSGAGGPDLELTLA
Sbjct: 241 SSQQLGSSMEVMNNNNQASSSSSSIWLYGLIDSQLKSASQTMICSSSSGAGGPDLELTLA 300

Query: 301 APRASNLEYEQTKKASTGSLLVDPIRVP 329
           APRASNLEYEQTKKASTGSLLVDPIRVP
Sbjct: 301 APRASNLEYEQTKKASTGSLLVDPIRVP 328

[Close]
BLAST of Carg13006 vs. NCBI nr
Match: XP_022960686.1 (uncharacterized protein DDB_G0271670-like [Cucurbita moschata])

HSP 1 Score: 594.0 bits (1530), Expect = 8.1e-166
Identity = 324/329 (98.48%), Postives = 326/329 (99.09%), Query Frame = 0 

Query: 1   MGRKCSHCGNIGHNSRTCTNFRPSITPNFNVGSGLIRLFGVHLDSSSSSSSSSSSSSSSS 60
           MGRKCSHCGNIGHNSRTCTNFRPSITPNFNVGSGLIRLFGVHLD  SSSSSSSSSSSSSS
Sbjct: 1   MGRKCSHCGNIGHNSRTCTNFRPSITPNFNVGSGLIRLFGVHLD--SSSSSSSSSSSSSS 60

Query: 61  TTTSSSAAAFAIKKSFSTDCL-SSSSSSSFSTSRIQIDHNLEPSKPTNGYLSDGLLNGDQ 120
           TT+SSSAAAFAIKKSFSTDCL SSSSSSSFSTSRIQIDHNLEPSKPTNGYLSDGLLNGDQ
Sbjct: 61  TTSSSSAAAFAIKKSFSTDCLSSSSSSSSFSTSRIQIDHNLEPSKPTNGYLSDGLLNGDQ 120

Query: 121 ERKKGVPWTEEEHRIFLIGLEKLGRGDWRGISRNYVTTKTPTQVASHAQKYFLRQSTVNK 180
           ERKKGVPWTEEEHRIFLIGLEKLGRGDWRGISRNYVTTKTPTQVASHAQKYFLRQSTVNK
Sbjct: 121 ERKKGVPWTEEEHRIFLIGLEKLGRGDWRGISRNYVTTKTPTQVASHAQKYFLRQSTVNK 180

Query: 181 KNRRSSLFNMVGTAYDTTTTALSQCLKISSNSQTHSNKNEMNIKKELNLPLLESKITTTF 240
           KNRRSSLF+MVGTAYDTTTTALSQCLKISSNSQTHSNKNEMNIKKELNLPLLESKITTTF
Sbjct: 181 KNRRSSLFDMVGTAYDTTTTALSQCLKISSNSQTHSNKNEMNIKKELNLPLLESKITTTF 240

Query: 241 ASSQQLGSSMEVMNNNNQASSSSSSIWLYGLIDSQLKSASQTMICSSSSGAGGPDLELTL 300
           ASSQQLGSSMEVMNNNNQASSSSSSIWLYGLIDSQLKSASQTMICSSSSGAGGPDLELTL
Sbjct: 241 ASSQQLGSSMEVMNNNNQASSSSSSIWLYGLIDSQLKSASQTMICSSSSGAGGPDLELTL 300

Query: 301 AAPRASNLEYEQTKKASTGSLLVDPIRVP 329
           AAPRASNLEYEQTKKASTGSLLVDPIRVP
Sbjct: 301 AAPRASNLEYEQTKKASTGSLLVDPIRVP 327

[Close]
BLAST of Carg13006 vs. NCBI nr
Match: KAG6589987.1 (Transcription factor MYBS3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 592.4 bits (1526), Expect = 2.3e-165
Identity = 324/329 (98.48%), Postives = 325/329 (98.78%), Query Frame = 0 

Query: 1   MGRKCSHCGNIGHNSRTCTNFRPSITPNFNVGSGLIRLFGVHLDSSSSSSSSSSSSSSSS 60
           MGRKCSHCGNIGHNSRTCTNFRPSITPNFNVGSGLIRLFGVHLDSSSSSSSSSSSSSSSS
Sbjct: 1   MGRKCSHCGNIGHNSRTCTNFRPSITPNFNVGSGLIRLFGVHLDSSSSSSSSSSSSSSSS 60

Query: 61  TTTSSSAAAFAIKKSFSTDCL-SSSSSSSFSTSRIQIDHNLEPSKPTNGYLSDGLLNGDQ 120
              SSSAAAFAIKKSFSTDCL SSSSSSSFSTSRIQIDHNLEPSKPTNGYLSDGLLNGDQ
Sbjct: 61  ---SSSAAAFAIKKSFSTDCLSSSSSSSSFSTSRIQIDHNLEPSKPTNGYLSDGLLNGDQ 120

Query: 121 ERKKGVPWTEEEHRIFLIGLEKLGRGDWRGISRNYVTTKTPTQVASHAQKYFLRQSTVNK 180
           ERKKGVPWTEEEHRIFLIGLEKLGRGDWRGISRNYVTTKTPTQVASHAQKYFLRQSTVNK
Sbjct: 121 ERKKGVPWTEEEHRIFLIGLEKLGRGDWRGISRNYVTTKTPTQVASHAQKYFLRQSTVNK 180

Query: 181 KNRRSSLFNMVGTAYDTTTTALSQCLKISSNSQTHSNKNEMNIKKELNLPLLESKITTTF 240
           KNRRSSLF+MVGTAYDTTTTALSQCLKISSNSQTHSNKNEMNIKKELNLPLLESKITTTF
Sbjct: 181 KNRRSSLFDMVGTAYDTTTTALSQCLKISSNSQTHSNKNEMNIKKELNLPLLESKITTTF 240

Query: 241 ASSQQLGSSMEVMNNNNQASSSSSSIWLYGLIDSQLKSASQTMICSSSSGAGGPDLELTL 300
           ASSQQLGSSMEVMNNNNQASSSSSSIWLYGLIDSQLKSASQTMICSSSSGAGGPDLELTL
Sbjct: 241 ASSQQLGSSMEVMNNNNQASSSSSSIWLYGLIDSQLKSASQTMICSSSSGAGGPDLELTL 300

Query: 301 AAPRASNLEYEQTKKASTGSLLVDPIRVP 329
           AAPRASNLEYEQTKKASTGSLLVDPIRVP
Sbjct: 301 AAPRASNLEYEQTKKASTGSLLVDPIRVP 326

[Close]
BLAST of Carg13006 vs. NCBI nr
Match: XP_023515620.1 (uncharacterized protein DDB_G0271670-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023515621.1 uncharacterized protein DDB_G0271670-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 589.0 bits (1517), Expect = 2.6e-164
Identity = 324/331 (97.89%), Postives = 326/331 (98.49%), Query Frame = 0 

Query: 1   MGRKCSHCGNIGHNSRTCTNFRPSITPNFNVGSGLIRLFGVHLDSSSSSSSSSSSSSSSS 60
           MGRKCSHCGNIGHNSRTCTNFRPSITPNFNVGSGLIRLFGVHLD  SSSSSSSSSSSSSS
Sbjct: 1   MGRKCSHCGNIGHNSRTCTNFRPSITPNFNVGSGLIRLFGVHLD--SSSSSSSSSSSSSS 60

Query: 61  TTTSSSAAAFAIKKSFSTDCL-SSSSSSSFSTSRIQIDHNLEPSKPTNGYLSDGLLNGDQ 120
           TT+SSSAAAFAIKKSFSTDCL SSSSSSSFSTSRIQIDHNLEPSKPTNGYLSDGLLNGDQ
Sbjct: 61  TTSSSSAAAFAIKKSFSTDCLSSSSSSSSFSTSRIQIDHNLEPSKPTNGYLSDGLLNGDQ 120

Query: 121 ERKKGVPWTEEEHRIFLIGLEKLGRGDWRGISRNYVTTKTPTQVASHAQKYFLRQSTVNK 180
           ERKKGVPWTEEEHRIFLIGLEKLGRGDWRGISRNYVTTKTPTQVASHAQKYFLRQSTVNK
Sbjct: 121 ERKKGVPWTEEEHRIFLIGLEKLGRGDWRGISRNYVTTKTPTQVASHAQKYFLRQSTVNK 180

Query: 181 KNRRSSLFNMVGTAYDTTTTALSQCLKISSNSQTHSNKNEMNIKKELNLPLLESKITTTF 240
           KNRRSSLF+MVGTAYDTTTTALSQCLKISSNSQTHSNKNEMNIKKELNLPLLESKITTTF
Sbjct: 181 KNRRSSLFDMVGTAYDTTTTALSQCLKISSNSQTHSNKNEMNIKKELNLPLLESKITTTF 240

Query: 241 ASSQQLGSSMEVMNNNNQA--SSSSSSIWLYGLIDSQLKSASQTMICSSSSGAGGPDLEL 300
           ASSQQLGSSMEVMNNNNQA  SSSSSSIWLYGLIDSQLKSASQTMICSSSSGAGGPDLEL
Sbjct: 241 ASSQQLGSSMEVMNNNNQAFSSSSSSSIWLYGLIDSQLKSASQTMICSSSSGAGGPDLEL 300

Query: 301 TLAAPRASNLEYEQTKKASTGSLLVDPIRVP 329
           TLAAPRASNLEYEQTKKASTGSLLVDPIRVP
Sbjct: 301 TLAAPRASNLEYEQTKKASTGSLLVDPIRVP 329

[Close]
BLAST of Carg13006 vs. NCBI nr
Match: XP_022987786.1 (uncharacterized protein DDB_G0271670-like [Cucurbita maxima])

HSP 1 Score: 576.6 bits (1485), Expect = 1.3e-160
Identity = 316/329 (96.05%), Postives = 321/329 (97.57%), Query Frame = 0 

Query: 1   MGRKCSHCGNIGHNSRTCTNFRPSITPNFNVGSGLIRLFGVHLDSSSSSSSSSSSSSSSS 60
           MGRKCSHCGNIGHNSRTCTNFRPSITPNFNVGSGLIRLFGVHLD  SSSSSSSSSSSSSS
Sbjct: 1   MGRKCSHCGNIGHNSRTCTNFRPSITPNFNVGSGLIRLFGVHLD--SSSSSSSSSSSSSS 60

Query: 61  TTTSSSAAAFAIKKSFSTDCL-SSSSSSSFSTSRIQIDHNLEPSKPTNGYLSDGLLNGDQ 120
           TT+SSSAAAFAIKKSFSTDCL SSSSSSSFSTSRIQ+DHNLEPSK  NGYLSDGLLNGDQ
Sbjct: 61  TTSSSSAAAFAIKKSFSTDCLSSSSSSSSFSTSRIQLDHNLEPSKSANGYLSDGLLNGDQ 120

Query: 121 ERKKGVPWTEEEHRIFLIGLEKLGRGDWRGISRNYVTTKTPTQVASHAQKYFLRQSTVNK 180
           ERKKGVPWTEEEHRIFLIGLEKLGRGDWRGISRNYVTTKTPTQVASHAQKY+LRQST+NK
Sbjct: 121 ERKKGVPWTEEEHRIFLIGLEKLGRGDWRGISRNYVTTKTPTQVASHAQKYYLRQSTINK 180

Query: 181 KNRRSSLFNMVGTAYDTTTTALSQCLKISSNSQTHSNKNEMNIKKELNLPLLESKITTTF 240
           KNRRSSLF+MVGTAYDTTTTALSQCLKISSNSQTHSNKNEMNIKKELNLPLLESKITTTF
Sbjct: 181 KNRRSSLFDMVGTAYDTTTTALSQCLKISSNSQTHSNKNEMNIKKELNLPLLESKITTTF 240

Query: 241 ASSQQLGSSMEVMNNNNQASSSSSSIWLYGLIDSQLKSASQTMICSSSSGAGGPDLELTL 300
           ASSQQL SSMEVMNNNNQA SSSSSIWLYGLIDSQLKSASQTMICSSSSGAGGPDLELTL
Sbjct: 241 ASSQQLASSMEVMNNNNQA-SSSSSIWLYGLIDSQLKSASQTMICSSSSGAGGPDLELTL 300

Query: 301 AAPRASNLEYEQTKKASTGSLLVDPIRVP 329
           AAPRASNLEYEQTKK STGSLLVDPIRVP
Sbjct: 301 AAPRASNLEYEQTKKPSTGSLLVDPIRVP 326

[Close]
BLAST of Carg13006 vs. ExPASy Swiss-Prot
Match: Q7XC57 (Transcription factor MYBS3 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS3 PE=2 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 3.4e-34
Identity = 91/196 (46.43%), Postives = 116/196 (59.18%), Query Frame = 0 

Query: 1   MGRKCSHCGNIGHNSRTCTNFRPSITPNFNVGSGLIRLFGVHLDSSSSSSSSSSSSSSSS 60
           M R+CSHC + GHNSRTC N               +++FGV L   S             
Sbjct: 1   MTRRCSHCSHNGHNSRTCPNRG-------------VKIFGVRLTDGS------------- 60

Query: 61  TTTSSSAAAFAIKKSFSTDCLSSSSSSSFSTSRIQIDHNLEPSKPT--NGYLSDGLLNGD 120
                      I+KS S   LS  SS++ STS      +   + PT  +GY SD  + G 
Sbjct: 61  -----------IRKSASMGNLSLLSSAAGSTSGGASPADGPDAAPTAADGYASDDFVQGS 120

Query: 121 ----QERKKGVPWTEEEHRIFLIGLEKLGRGDWRGISRNYVTTKTPTQVASHAQKYFLRQ 180
               ++RKKGVPWTEEEHR FL+GL+KLG+GDWRGISRN+V ++TPTQVASHAQKYF+RQ
Sbjct: 121 SSATRDRKKGVPWTEEEHRRFLLGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQ 159

Query: 181 STVNKKNRRSSLFNMV 191
           S + ++ RRSSLF+MV
Sbjct: 181 SNMTRRKRRSSLFDMV 159

[Close]
BLAST of Carg13006 vs. ExPASy Swiss-Prot
Match: Q9LVS0 (Transcription factor KUA1 OS=Arabidopsis thaliana OX=3702 GN=KUA1 PE=1 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 2.7e-31
Identity = 91/193 (47.15%), Postives = 116/193 (60.10%), Query Frame = 0 

Query: 1   MGRKCSHCGNIGHNSRTCTNFRPSITPNFNVGSGLIRLFGVHLDSSSSSSSSSSSSSSSS 60
           M R+CSHC + GHNSRTC N               ++LFGV L   S   S+S  + S  
Sbjct: 1   MTRRCSHCNHNGHNSRTCPNRG-------------VKLFGVRLTEGSIRKSASMGNLSHY 60

Query: 61  TTTSSSAAAFAIKKSFSTDCLSSSSSSSFSTSRIQIDHNLEPSKPTNGYLSDGLLNG--- 120
           T + S                 + S++  S   +  DH        +GY S+  + G   
Sbjct: 61  TGSGSGGH-------------GTGSNTPGSPGDVP-DH-----VAGDGYASEDFVAGSSS 120

Query: 121 DQERKKGVPWTEEEHRIFLIGLEKLGRGDWRGISRNYVTTKTPTQVASHAQKYFLRQSTV 180
            +ERKKG PWTEEEHR+FL+GL+KLG+GDWRGISRNYVTT+TPTQVASHAQKYF+RQS V
Sbjct: 121 SRERKKGTPWTEEEHRMFLLGLQKLGKGDWRGISRNYVTTRTPTQVASHAQKYFIRQSNV 161

Query: 181 NKKNRRSSLFNMV 191
           +++ RRSSLF+MV
Sbjct: 181 SRRKRRSSLFDMV 161

[Close]
BLAST of Carg13006 vs. ExPASy Swiss-Prot
Match: Q9FKF9 (Probable transcription factor At5g61620 OS=Arabidopsis thaliana OX=3702 GN=At5g61620 PE=3 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 5.3e-27
Identity = 80/197 (40.61%), Postives = 113/197 (57.36%), Query Frame = 0 

Query: 1   MGRKCSHCGNIGHNSRTCTNFRPSITPNFNVGSGLIRLFGVHLDSSSSSSSSSSSSSSSS 60
           + + CSHCG+ GHN+RTC N          V    ++LFGV++ S        +      
Sbjct: 8   VAKTCSHCGHNGHNARTCLN---------GVNKASVKLFGVNISSDPIRPPEVT------ 67

Query: 61  TTTSSSAAAFAIKKSFS---TDCLSSSSSSSFSTSRIQIDHNLEPSKPTNGYLSDGLLNG 120
                     A++KS S    D L ++  S+ S   I        +    GY SDG ++ 
Sbjct: 68  ----------ALRKSLSLGNLDALLANDESNGSGDPI-------AAVDDTGYHSDGQIHS 127

Query: 121 DQ-----ERKKGVPWTEEEHRIFLIGLEKLGRGDWRGISRNYVTTKTPTQVASHAQKYFL 180
            +     E+KKG PWTEEEHR FLIGL KLG+GDWRGI++++V+T+TPTQVASHAQKYF+
Sbjct: 128 KKGKTAHEKKKGKPWTEEEHRNFLIGLNKLGKGDWRGIAKSFVSTRTPTQVASHAQKYFI 172

Query: 181 RQSTVNKKNRRSSLFNM 190
           R +  +K+ RR+SLF++
Sbjct: 188 RLNVNDKRKRRASLFDI 172

[Close]
BLAST of Carg13006 vs. ExPASy Swiss-Prot
Match: B8BI93 (Transcription factor MYBS2 OS=Oryza sativa subsp. indica OX=39946 GN=MYBS2 PE=3 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 2.9e-25
Identity = 54/77 (70.13%), Postives = 65/77 (84.42%), Query Frame = 0 

Query: 119 QERKKGVPWTEEEHRIFLIGLEKLGRGDWRGISRNYVTTKTPTQVASHAQKYFLRQSTVN 178
           QERKKGVPWTEEEH+ FL GL +LG+GDWRGIS+N+VT++T TQVASHAQKYFLRQ+   
Sbjct: 93  QERKKGVPWTEEEHKKFLEGLRQLGKGDWRGISKNFVTSRTATQVASHAQKYFLRQTNPG 152

Query: 179 KKNRRSSLFNMVGTAYD 196
           KK RR+SLF++V    D
Sbjct: 153 KKKRRASLFDVVAECSD 169

[Close]
BLAST of Carg13006 vs. ExPASy Swiss-Prot
Match: Q7XC51 (Transcription factor MYBS2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS2 PE=2 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 2.9e-25
Identity = 54/77 (70.13%), Postives = 65/77 (84.42%), Query Frame = 0 

Query: 119 QERKKGVPWTEEEHRIFLIGLEKLGRGDWRGISRNYVTTKTPTQVASHAQKYFLRQSTVN 178
           QERKKGVPWTEEEH+ FL GL +LG+GDWRGIS+N+VT++T TQVASHAQKYFLRQ+   
Sbjct: 93  QERKKGVPWTEEEHKKFLEGLRQLGKGDWRGISKNFVTSRTATQVASHAQKYFLRQTNPG 152

Query: 179 KKNRRSSLFNMVGTAYD 196
           KK RR+SLF++V    D
Sbjct: 153 KKKRRASLFDVVAECSD 169

[Close]
BLAST of Carg13006 vs. ExPASy TrEMBL
Match: A0A6J1H8A8 (uncharacterized protein DDB_G0271670-like OS=Cucurbita moschata OX=3662 GN=LOC111461407 PE=4 SV=1)

HSP 1 Score: 594.0 bits (1530), Expect = 3.9e-166
Identity = 324/329 (98.48%), Postives = 326/329 (99.09%), Query Frame = 0 

Query: 1   MGRKCSHCGNIGHNSRTCTNFRPSITPNFNVGSGLIRLFGVHLDSSSSSSSSSSSSSSSS 60
           MGRKCSHCGNIGHNSRTCTNFRPSITPNFNVGSGLIRLFGVHLD  SSSSSSSSSSSSSS
Sbjct: 1   MGRKCSHCGNIGHNSRTCTNFRPSITPNFNVGSGLIRLFGVHLD--SSSSSSSSSSSSSS 60

Query: 61  TTTSSSAAAFAIKKSFSTDCL-SSSSSSSFSTSRIQIDHNLEPSKPTNGYLSDGLLNGDQ 120
           TT+SSSAAAFAIKKSFSTDCL SSSSSSSFSTSRIQIDHNLEPSKPTNGYLSDGLLNGDQ
Sbjct: 61  TTSSSSAAAFAIKKSFSTDCLSSSSSSSSFSTSRIQIDHNLEPSKPTNGYLSDGLLNGDQ 120

Query: 121 ERKKGVPWTEEEHRIFLIGLEKLGRGDWRGISRNYVTTKTPTQVASHAQKYFLRQSTVNK 180
           ERKKGVPWTEEEHRIFLIGLEKLGRGDWRGISRNYVTTKTPTQVASHAQKYFLRQSTVNK
Sbjct: 121 ERKKGVPWTEEEHRIFLIGLEKLGRGDWRGISRNYVTTKTPTQVASHAQKYFLRQSTVNK 180

Query: 181 KNRRSSLFNMVGTAYDTTTTALSQCLKISSNSQTHSNKNEMNIKKELNLPLLESKITTTF 240
           KNRRSSLF+MVGTAYDTTTTALSQCLKISSNSQTHSNKNEMNIKKELNLPLLESKITTTF
Sbjct: 181 KNRRSSLFDMVGTAYDTTTTALSQCLKISSNSQTHSNKNEMNIKKELNLPLLESKITTTF 240

Query: 241 ASSQQLGSSMEVMNNNNQASSSSSSIWLYGLIDSQLKSASQTMICSSSSGAGGPDLELTL 300
           ASSQQLGSSMEVMNNNNQASSSSSSIWLYGLIDSQLKSASQTMICSSSSGAGGPDLELTL
Sbjct: 241 ASSQQLGSSMEVMNNNNQASSSSSSIWLYGLIDSQLKSASQTMICSSSSGAGGPDLELTL 300

Query: 301 AAPRASNLEYEQTKKASTGSLLVDPIRVP 329
           AAPRASNLEYEQTKKASTGSLLVDPIRVP
Sbjct: 301 AAPRASNLEYEQTKKASTGSLLVDPIRVP 327

[Close]
BLAST of Carg13006 vs. ExPASy TrEMBL
Match: A0A6J1JFB4 (uncharacterized protein DDB_G0271670-like OS=Cucurbita maxima OX=3661 GN=LOC111485230 PE=4 SV=1)

HSP 1 Score: 576.6 bits (1485), Expect = 6.5e-161
Identity = 316/329 (96.05%), Postives = 321/329 (97.57%), Query Frame = 0 

Query: 1   MGRKCSHCGNIGHNSRTCTNFRPSITPNFNVGSGLIRLFGVHLDSSSSSSSSSSSSSSSS 60
           MGRKCSHCGNIGHNSRTCTNFRPSITPNFNVGSGLIRLFGVHLD  SSSSSSSSSSSSSS
Sbjct: 1   MGRKCSHCGNIGHNSRTCTNFRPSITPNFNVGSGLIRLFGVHLD--SSSSSSSSSSSSSS 60

Query: 61  TTTSSSAAAFAIKKSFSTDCL-SSSSSSSFSTSRIQIDHNLEPSKPTNGYLSDGLLNGDQ 120
           TT+SSSAAAFAIKKSFSTDCL SSSSSSSFSTSRIQ+DHNLEPSK  NGYLSDGLLNGDQ
Sbjct: 61  TTSSSSAAAFAIKKSFSTDCLSSSSSSSSFSTSRIQLDHNLEPSKSANGYLSDGLLNGDQ 120

Query: 121 ERKKGVPWTEEEHRIFLIGLEKLGRGDWRGISRNYVTTKTPTQVASHAQKYFLRQSTVNK 180
           ERKKGVPWTEEEHRIFLIGLEKLGRGDWRGISRNYVTTKTPTQVASHAQKY+LRQST+NK
Sbjct: 121 ERKKGVPWTEEEHRIFLIGLEKLGRGDWRGISRNYVTTKTPTQVASHAQKYYLRQSTINK 180

Query: 181 KNRRSSLFNMVGTAYDTTTTALSQCLKISSNSQTHSNKNEMNIKKELNLPLLESKITTTF 240
           KNRRSSLF+MVGTAYDTTTTALSQCLKISSNSQTHSNKNEMNIKKELNLPLLESKITTTF
Sbjct: 181 KNRRSSLFDMVGTAYDTTTTALSQCLKISSNSQTHSNKNEMNIKKELNLPLLESKITTTF 240

Query: 241 ASSQQLGSSMEVMNNNNQASSSSSSIWLYGLIDSQLKSASQTMICSSSSGAGGPDLELTL 300
           ASSQQL SSMEVMNNNNQA SSSSSIWLYGLIDSQLKSASQTMICSSSSGAGGPDLELTL
Sbjct: 241 ASSQQLASSMEVMNNNNQA-SSSSSIWLYGLIDSQLKSASQTMICSSSSGAGGPDLELTL 300

Query: 301 AAPRASNLEYEQTKKASTGSLLVDPIRVP 329
           AAPRASNLEYEQTKK STGSLLVDPIRVP
Sbjct: 301 AAPRASNLEYEQTKKPSTGSLLVDPIRVP 326

[Close]
BLAST of Carg13006 vs. ExPASy TrEMBL
Match: A0A1S3BR73 (probable serine/threonine-protein kinase DDB_G0282963 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492310 PE=4 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 6.6e-97
Identity = 241/364 (66.21%), Postives = 269/364 (73.90%), Query Frame = 0 

Query: 1   MGRKCSHCGNIGHNSRTCTNFRPS-ITPNFNVGS--GLIRLFGVHLDS--SSSSSSSSSS 60
           M RKCSHCGNIGHNSRTC+N R S ITPN NVGS  GLIRLFGVHLDS  SSSS+SSS++
Sbjct: 1   MVRKCSHCGNIGHNSRTCSNIRGSIITPNLNVGSNCGLIRLFGVHLDSYNSSSSTSSSTT 60

Query: 61  SSSSSTTTSSSAAAFAIKKSFSTDCLSSSSSSSFSTSRIQID------HNLE--PSKPTN 120
           SSSS+ + SS+A+AF+IKKSFSTDCLSSSSSSS   SRI ID      H+LE     P+N
Sbjct: 61  SSSSNASYSSTASAFSIKKSFSTDCLSSSSSSS---SRIHIDNHHHHHHHLEHYSKSPSN 120

Query: 121 GYLSDGLLNGDQERKKGVPWTEEEHRIFLIGLEKLGRGDWRGISRNYVTTKTPTQVASHA 180
           GYLSDGLLNGDQERKKGVPWTEEEHR FLIGLEKLGRGDWRGISRNYVTT+TPTQVASHA
Sbjct: 121 GYLSDGLLNGDQERKKGVPWTEEEHRKFLIGLEKLGRGDWRGISRNYVTTRTPTQVASHA 180

Query: 181 QKYFLRQSTVNKKNRRSSLFNMVGTAYDTTTT-ALSQCLKISSNSQTHSNKNEMN-IKKE 240
           QKYFLRQST+NKKNRRSSLF+MVGTAY+TTTT ALSQCLKISSNSQ   + +  N I   
Sbjct: 181 QKYFLRQSTLNKKNRRSSLFDMVGTAYETTTTAALSQCLKISSNSQNDDDDDNNNIIIDH 240

Query: 241 LNLPLLESKITTTFA-SSQQL--------GSSMEVMNNNNQ------ASSSSSSIWLYGL 300
            N   + S ITTTFA SSQQL         ++MEV+NN N       +SSSSSS+W+YGL
Sbjct: 241 YNKKEVMSNITTTFASSSQQLPYNNTNTNNNNMEVINNKNNNNHNQISSSSSSSLWVYGL 300

Query: 301 IDSQLKSASQ--------------TMICSSSSGAGGPDLELTLAAPRASNLEYEQTKKAS 321
           I+S LKS                  +  SSSS    P LELTLA+P ASNLE EQ K   
Sbjct: 301 INSHLKSPPNLYNNYSNSTPPKYPIISSSSSSNDHQPHLELTLASPMASNLELEQNKNPP 360

[Close]
BLAST of Carg13006 vs. ExPASy TrEMBL
Match: A0A6J1D2T3 (myb-like protein J OS=Momordica charantia OX=3673 GN=LOC111016474 PE=4 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 1.1e-86
Identity = 223/364 (61.26%), Postives = 252/364 (69.23%), Query Frame = 0 

Query: 1   MGRKCSHCGNIGHNSRTCTNFRPSITPNFNVGSGL----IRLFGVHLDSSSSSSSSSSSS 60
           MGRKCSHCGNIGHNSRTC+NFRPS   NF   +      IRLFGVHLD SSSSSS+ SSS
Sbjct: 1   MGRKCSHCGNIGHNSRTCSNFRPS-NNNFVAATATSGPPIRLFGVHLDPSSSSSSNYSSS 60

Query: 61  SSSSTTTSSSAAAFAIKKSFSTDCLS------SSSSSSFSTSRIQIDHNLEPSKPTNGYL 120
            + +         FAIKKSFSTDCLS       SSSSSFS+SRI +D + +   P NGYL
Sbjct: 61  PNHN---------FAIKKSFSTDCLSLPSSSPPSSSSSFSSSRIHVDAD-DTKPPINGYL 120

Query: 121 SDGLLNGDQERKKGVPWTEEEHRIFLIGLEKLGRGDWRGISRNYVTTKTPTQVASHAQKY 180
           SDGLL  +Q+RKKGVPWTEEEHRIFLIGLEKLGRGDWRGISRNYVTT+TPTQVASHAQKY
Sbjct: 121 SDGLLTREQDRKKGVPWTEEEHRIFLIGLEKLGRGDWRGISRNYVTTRTPTQVASHAQKY 180

Query: 181 FLRQSTVNKKNRRSSLFNMVG---------TAYDTTTTALSQCLKISSNSQTHSNKNEMN 240
           FLRQST+NKKNRRSSLF+MVG         T   TTT   SQCLK+SSNSQ  S   +  
Sbjct: 181 FLRQSTINKKNRRSSLFDMVGRTKACDKTTTTASTTTANFSQCLKLSSNSQELSKNKD-- 240

Query: 241 IKKELNLPLLESKITTTFASSQQLGSSMEVMNNN---------NQASSSSSSIWLYGLI- 300
             ++L LPLL+   TT+F S+    + MEV+N             A+SSSS +W+YGLI 
Sbjct: 241 -DRQLTLPLLDR--TTSFGSAY---NYMEVINKKLDDQLMADAAAAASSSSGVWIYGLID 300

Query: 301 DSQLKSASQ----TMICSS---SSGAGGPDLELTLAAP-RASNLEYEQTKKASTGSLLVD 328
           DSQLK +S        CSS   SS A GPDLELTLAAP  ASNLE + +KKA  GSLLV 
Sbjct: 301 DSQLKCSSSPKKPNSYCSSSTNSSAAAGPDLELTLAAPSMASNLE-QNSKKAPPGSLLVG 344

[Close]
BLAST of Carg13006 vs. ExPASy TrEMBL
Match: A0A1S3BPK2 (transcription factor MYB1R1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492310 PE=4 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 4.6e-82
Identity = 192/255 (75.29%), Postives = 212/255 (83.14%), Query Frame = 0 

Query: 1   MGRKCSHCGNIGHNSRTCTNFRPS-ITPNFNVGS--GLIRLFGVHLDS--SSSSSSSSSS 60
           M RKCSHCGNIGHNSRTC+N R S ITPN NVGS  GLIRLFGVHLDS  SSSS+SSS++
Sbjct: 1   MVRKCSHCGNIGHNSRTCSNIRGSIITPNLNVGSNCGLIRLFGVHLDSYNSSSSTSSSTT 60

Query: 61  SSSSSTTTSSSAAAFAIKKSFSTDCLSSSSSSSFSTSRIQID------HNLE--PSKPTN 120
           SSSS+ + SS+A+AF+IKKSFSTDCLSSSSSSS   SRI ID      H+LE     P+N
Sbjct: 61  SSSSNASYSSTASAFSIKKSFSTDCLSSSSSSS---SRIHIDNHHHHHHHLEHYSKSPSN 120

Query: 121 GYLSDGLLNGDQERKKGVPWTEEEHRIFLIGLEKLGRGDWRGISRNYVTTKTPTQVASHA 180
           GYLSDGLLNGDQERKKGVPWTEEEHR FLIGLEKLGRGDWRGISRNYVTT+TPTQVASHA
Sbjct: 121 GYLSDGLLNGDQERKKGVPWTEEEHRKFLIGLEKLGRGDWRGISRNYVTTRTPTQVASHA 180

Query: 181 QKYFLRQSTVNKKNRRSSLFNMVGTAYDTTTT-ALSQCLKISSNSQTHSNKNEMNI---- 236
           QKYFLRQST+NKKNRRSSLF+MVGTAY+TTTT ALSQCLKISSNSQ   + +  NI    
Sbjct: 181 QKYFLRQSTLNKKNRRSSLFDMVGTAYETTTTAALSQCLKISSNSQNDDDDDNNNIIIDH 240

[Close]
BLAST of Carg13006 vs. TAIR 10
Match: AT5G56840.1 (myb-like transcription factor family protein )

HSP 1 Score: 182.2 bits (461), Expect = 6.8e-46
Identity = 130/302 (43.05%), Postives = 162/302 (53.64%), Query Frame = 0 

Query: 1   MGRKCSHCGNIGHNSRTCTNFRPSITPNFNVGSGLIRLFGVHLDSSSSSSSSSSSSSSSS 60
           MGR+CSHCGN+GHNSRTC++++  +          +RLFGVHLD         ++SSS  
Sbjct: 1   MGRRCSHCGNVGHNSRTCSSYQTRV----------VRLFGVHLD---------TTSSSPP 60

Query: 61  TTTSSSAAAFAIKKSFSTDCLSSSSSSSFSTSRIQIDHNLEPSKPTNGYLSDGLLNGDQE 120
                S  A AIKKSFS DCL + SSSS S +               GYLSDGL +   +
Sbjct: 61  PPPPPSILAAAIKKSFSMDCLPACSSSSSSFA---------------GYLSDGLAHKTPD 120

Query: 121 RKKGVPWTEEEHRIFLIGLEKLGRGDWRGISRNYVTTKTPTQVASHAQKYFLRQ-STVNK 180
           RKKGVPWT EEHR FLIGLEKLG+GDWRGISRN+V TK+PTQVASHAQKYFLRQ +T++ 
Sbjct: 121 RKKGVPWTAEEHRTFLIGLEKLGKGDWRGISRNFVVTKSPTQVASHAQKYFLRQTTTLHH 180

Query: 181 KNRRSSLFNMVGTAYDTTTTALSQCLKISSNSQTHSNKNEMNIKKELNLPLLESKITTTF 240
           K RR+SLF+MV                +  NS T                    +I    
Sbjct: 181 KRRRTSLFDMVSAG------------NVEENSTT-------------------KRIC--- 219

Query: 241 ASSQQLGSSMEVMNNNNQASSSSSSIWLYGLIDSQLKSASQTMICSSSSGAGGPDLELTL 300
                          N+   SSS  +W  GL++ +L      +  S S  +GG DLEL L
Sbjct: 241 ---------------NDHIGSSSKVVWKQGLLNPRLGYPDPKVSVSGSGNSGGLDLELKL 219

Query: 301 AA 302
           A+
Sbjct: 301 AS 219

[Close]
BLAST of Carg13006 vs. TAIR 10
Match: AT1G70000.1 (myb-like transcription factor family protein )

HSP 1 Score: 138.7 bits (348), Expect = 8.6e-33
Identity = 101/280 (36.07%), Postives = 147/280 (52.50%), Query Frame = 0 

Query: 1   MGRKCSHCGNIGHNSRTCTNFRPSITPNFNVGSG--LIRLFGVHLDSSSSSSSSSSSSSS 60
           M R CS CGN GHNSRTC     +   N + G G   I LFGV +  +SSS         
Sbjct: 1   MSRSCSQCGNNGHNSRTCPTDITTTGDNNDKGGGEKAIMLFGVRVTEASSS--------- 60

Query: 61  SSTTTSSSAAAFAIKKSFSTDCLSSSSSSSFSTSRIQIDHNLEPSKPTN--GYLSDGLLN 120
                         +KS S + LS            Q D   +P+ PT+  GY SD +++
Sbjct: 61  ------------CFRKSVSMNNLS------------QFDQTPDPN-PTDDGGYASDDVVH 120

Query: 121 G---DQERKKGVPWTEEEHRIFLIGLEKLGRGDWRGISRNYVTTKTPTQVASHAQKYFLR 180
               ++ERK+G PWTEEEHR+FL GL K+G+GDWRGISRN+V T+TPTQVASHAQKYFLR
Sbjct: 121 ASGRNRERKRGTPWTEEEHRLFLTGLHKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLR 180

Query: 181 QSTVNKKNRRSSLFNMVGTAYDTTTTALSQCLKISSNSQTHSNKNEMNIKKELNLPL--- 240
           ++  N++ RRSSLF++   ++            I S+ + +  +  + + + + +P+   
Sbjct: 181 RTNQNRRRRRSSLFDITPDSF------------IGSSKEENQLQTPLELIRPVPIPIPIP 234

Query: 241 -------LESKITTTFASSQQLGSSMEVMNNNNQASSSSS 264
                  L      T A+++    S+ +   ++  SSSS+
Sbjct: 241 PSRKMADLNLNKKKTPATTEMFPLSLNLQRPSSSTSSSSN 234

[Close]
BLAST of Carg13006 vs. TAIR 10
Match: AT1G70000.2 (myb-like transcription factor family protein )

HSP 1 Score: 138.7 bits (348), Expect = 8.6e-33
Identity = 101/280 (36.07%), Postives = 147/280 (52.50%), Query Frame = 0 

Query: 1   MGRKCSHCGNIGHNSRTCTNFRPSITPNFNVGSG--LIRLFGVHLDSSSSSSSSSSSSSS 60
           M R CS CGN GHNSRTC     +   N + G G   I LFGV +  +SSS         
Sbjct: 1   MSRSCSQCGNNGHNSRTCPTDITTTGDNNDKGGGEKAIMLFGVRVTEASSS--------- 60

Query: 61  SSTTTSSSAAAFAIKKSFSTDCLSSSSSSSFSTSRIQIDHNLEPSKPTN--GYLSDGLLN 120
                         +KS S + LS            Q D   +P+ PT+  GY SD +++
Sbjct: 61  ------------CFRKSVSMNNLS------------QFDQTPDPN-PTDDGGYASDDVVH 120

Query: 121 G---DQERKKGVPWTEEEHRIFLIGLEKLGRGDWRGISRNYVTTKTPTQVASHAQKYFLR 180
               ++ERK+G PWTEEEHR+FL GL K+G+GDWRGISRN+V T+TPTQVASHAQKYFLR
Sbjct: 121 ASGRNRERKRGTPWTEEEHRLFLTGLHKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLR 180

Query: 181 QSTVNKKNRRSSLFNMVGTAYDTTTTALSQCLKISSNSQTHSNKNEMNIKKELNLPL--- 240
           ++  N++ RRSSLF++   ++            I S+ + +  +  + + + + +P+   
Sbjct: 181 RTNQNRRRRRSSLFDITPDSF------------IGSSKEENQLQTPLELIRPVPIPIPIP 234

Query: 241 -------LESKITTTFASSQQLGSSMEVMNNNNQASSSSS 264
                  L      T A+++    S+ +   ++  SSSS+
Sbjct: 241 PSRKMADLNLNKKKTPATTEMFPLSLNLQRPSSSTSSSSN 234

[Close]
BLAST of Carg13006 vs. TAIR 10
Match: AT5G47390.1 (myb-like transcription factor family protein )

HSP 1 Score: 137.5 bits (345), Expect = 1.9e-32
Identity = 91/193 (47.15%), Postives = 116/193 (60.10%), Query Frame = 0 

Query: 1   MGRKCSHCGNIGHNSRTCTNFRPSITPNFNVGSGLIRLFGVHLDSSSSSSSSSSSSSSSS 60
           M R+CSHC + GHNSRTC N               ++LFGV L   S   S+S  + S  
Sbjct: 1   MTRRCSHCNHNGHNSRTCPNRG-------------VKLFGVRLTEGSIRKSASMGNLSHY 60

Query: 61  TTTSSSAAAFAIKKSFSTDCLSSSSSSSFSTSRIQIDHNLEPSKPTNGYLSDGLLNG--- 120
           T + S                 + S++  S   +  DH        +GY S+  + G   
Sbjct: 61  TGSGSGGH-------------GTGSNTPGSPGDVP-DH-----VAGDGYASEDFVAGSSS 120

Query: 121 DQERKKGVPWTEEEHRIFLIGLEKLGRGDWRGISRNYVTTKTPTQVASHAQKYFLRQSTV 180
            +ERKKG PWTEEEHR+FL+GL+KLG+GDWRGISRNYVTT+TPTQVASHAQKYF+RQS V
Sbjct: 121 SRERKKGTPWTEEEHRMFLLGLQKLGKGDWRGISRNYVTTRTPTQVASHAQKYFIRQSNV 161

Query: 181 NKKNRRSSLFNMV 191
           +++ RRSSLF+MV
Sbjct: 181 SRRKRRSSLFDMV 161

[Close]
BLAST of Carg13006 vs. TAIR 10
Match: AT3G16350.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 136.0 bits (341), Expect = 5.6e-32
Identity = 106/275 (38.55%), Postives = 147/275 (53.45%), Query Frame = 0 

Query: 1   MGRKCSHCGNIGHNSRTCTNFRPSITPNFNVGSG-----------LIRLFGVHLDSSSSS 60
           M R+CSHC N GHNSRTC             G G            ++LFGV L   S  
Sbjct: 1   MTRRCSHCSNNGHNSRTCPTRGGGTCGGSGGGGGGGGGGGSGSSSAVKLFGVRLTDGSII 60

Query: 61  SSSSSSSSSSSTTTSSSAAAFAIKKSFSTDCLSSSSSSSFS--TSRIQIDHNLEPSKPTN 120
             S+S  + S+   +++AA        S    S+ + S  S       + HN        
Sbjct: 61  KKSASMGNLSALAVAAAAATHHRLSPSSPLATSNLNDSPLSDHARYSNLHHN-------E 120

Query: 121 GYLSDGLLNGD------QERKKGVPWTEEEHRIFLIGLEKLGRGDWRGISRNYVTTKTPT 180
           GYLSD   +G        ERK+GVPWTEEEHR+FL+GL+KLG+GDWRGISRNYVT++TPT
Sbjct: 121 GYLSDDPAHGSGSSHRRGERKRGVPWTEEEHRLFLVGLQKLGKGDWRGISRNYVTSRTPT 180

Query: 181 QVASHAQKYFLRQSTVNKKNRRSSLFNMV--GTAYDTTTTALSQCLKISSNSQTHSNKNE 240
           QVASHAQKYF+R ++ +++ RRSSLF+MV      D++ T   Q L  SS S+    K+ 
Sbjct: 181 QVASHAQKYFIRHTSSSRRKRRSSLFDMVTDEMVTDSSPTQEEQTLNGSSPSKEPEKKSY 240

Query: 241 M-NIKKELNLPLLESKITTTFASSQQLGSSMEVMN 254
           + +++  LN      ++  T    ++   ++E  N
Sbjct: 241 LPSLELSLNNTTEAEEVVATAPRQEKSQEAIEPSN 268

The following BLAST results are available for this feature:
BLAST of Carg13006 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7023651.13.2e-170100.00Transcription factor MYBS3, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022960686.18.1e-16698.48uncharacterized protein DDB_G0271670-like [Cucurbita moschata][more]
KAG6589987.12.3e-16598.48Transcription factor MYBS3, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_023515620.12.6e-16497.89uncharacterized protein DDB_G0271670-like isoform X1 [Cucurbita pepo subsp. pepo... [more]
XP_022987786.11.3e-16096.05uncharacterized protein DDB_G0271670-like [Cucurbita maxima][more]
BLAST of Carg13006 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q7XC573.4e-3446.43Transcription factor MYBS3 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS3 PE=... [more]
Q9LVS02.7e-3147.15Transcription factor KUA1 OS=Arabidopsis thaliana OX=3702 GN=KUA1 PE=1 SV=1[more]
Q9FKF95.3e-2740.61Probable transcription factor At5g61620 OS=Arabidopsis thaliana OX=3702 GN=At5g6... [more]
B8BI932.9e-2570.13Transcription factor MYBS2 OS=Oryza sativa subsp. indica OX=39946 GN=MYBS2 PE=3 ... [more]
Q7XC512.9e-2570.13Transcription factor MYBS2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS2 PE=... [more]
BLAST of Carg13006 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1H8A83.9e-16698.48uncharacterized protein DDB_G0271670-like OS=Cucurbita moschata OX=3662 GN=LOC11... [more]
A0A6J1JFB46.5e-16196.05uncharacterized protein DDB_G0271670-like OS=Cucurbita maxima OX=3661 GN=LOC1114... [more]
A0A1S3BR736.6e-9766.21probable serine/threonine-protein kinase DDB_G0282963 isoform X1 OS=Cucumis melo... [more]
A0A6J1D2T31.1e-8661.26myb-like protein J OS=Momordica charantia OX=3673 GN=LOC111016474 PE=4 SV=1[more]
A0A1S3BPK24.6e-8275.29transcription factor MYB1R1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492... [more]
BLAST of Carg13006 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G56840.16.8e-4643.05myb-like transcription factor family protein [more]
AT1G70000.18.6e-3336.07myb-like transcription factor family protein [more]
AT1G70000.28.6e-3336.07myb-like transcription factor family protein [more]
AT5G47390.11.9e-3247.15myb-like transcription factor family protein [more]
AT3G16350.15.6e-3238.55Homeodomain-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 123..173
e-value: 4.8E-9
score: 46.1
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 119..171
score: 7.061747
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 126..171
e-value: 8.33318E-9
score: 48.7258
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 126..170
e-value: 4.1E-10
score: 39.7
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 119..175
score: 18.373886
IPR006447Myb domain, plantsTIGRFAMTIGR01557TIGR01557coord: 122..174
e-value: 2.7E-18
score: 64.0
NoneNo IPR availableGENE3D1.10.10.60coord: 125..177
e-value: 2.7E-15
score: 58.3
NoneNo IPR availablePANTHERPTHR44191TRANSCRIPTION FACTOR KUA1coord: 1..323
NoneNo IPR availablePANTHERPTHR44191:SF11MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEINcoord: 1..323
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 3..20
score: 8.597819
IPR017884SANT domainPROSITEPS51293SANTcoord: 127..175
score: 11.178035
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 121..175

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg13006-RACarg13006-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003676 nucleic acid binding