Carg13002 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg13002
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	GATA transcription factor 21-like isoform X1
Location	Carg_Chr10: 3272158 .. 3273808 (-)
RNA-Seq Expression	Carg13002
Synteny	Carg13002

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCCGCCTTATCACGACGACCTTCTCCGCCGTTCCTCCTCCCACCACCTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCCTCTCTTTCCCTGCCCCCGATCACTCCAACTCCGACGACCCTCGCCGGCTGCAGATCAAACACGAGGTATATTTTCAATTCCGACGACCCTTTAATTTCTTTTTCAAAAATTTCTGATTTTTTTTTTTTTTTTTTTTTTTTTTTGATTCATAGAGTGAAAGCTCAAGCTGCTGTGAGAATCATAATACTCATAATGATTTGGTCAACTGGTCTTCTTCTTCTTCTTCTTCTTCTTCTAAGATTAGATTGCTGATAAATTCTAACCAAATCAACACCGCCACCCAGATGATCCACGGCGGTCGGAATTCCCATGATCTTAACCGGACAACCATGCTAAACGACGGCGCCGCCATAATCAGAACTTGTTCCGACTGTAACACCACAAAAACTCCCCTTTGGAGGAGCGGCCCAAGAGGCCCTAAGGTAATTTCATTCCATTTAAAACACCATTCTTTCTTACTTTTTAAAATTAAAAAAAAAAAAAAAATTATAATATTTAATTTAAGATATAAACAGACCGTTAATTTTGTTGGGAATATATTTTAATAATCAGTTAATATTTTGAATATGATCTCTCCCACTTTCTTGAGATTGAAATTACATATTCTTGAGAATTCTCGAAACTTTTTCTCGAATCTCTTTAAGATTTTCTTTCAAGAGGTTCCCACAATCATTAACTCTCGAAACTCTTTTCTTCAATTGAGATTTTGTTTCAAGAAGTGACTTGTGTTCGAGTCGTAGTAAAGAAGATCGTGTGGAATGTTGAAGAATTTTTGTATGGTTAGGATATTTGCATCATTCTTAACATTAGAATATATAAACAGTAATTAACACCAGTATAATTAATCAATTAATTTTTTTTTCTAGAAACAAGTTAATTAATAGTATATATTTTATTTTTTAAGTATATTTTTTTTTATTAATTGTGGAATATATTTTATTTTCAAGAGTCGATTAAGAGCATATAGTCTTAATTAATTAAATTTTTTTCGAAATTGTTGACAGAATTAAATTTTTTTTTTAGAAATTAATTTAATTATTAATATATTAGTTGGTAGTTTGTATTCTACGGAAAGATATTTATTTATTTTATTGTGATTATAAGTGGCTTGGGAATTAAACAATTCTAGGGTTCGTTAAATTTGGGGTTATAATTTCCATTATTATGCAGTCTCTTTGCAACGCCTGTGGAATCCGGCAGAGAAAAGCAAGACGAGCGATGGCGGAAGCGGCGGCAATGAACGGCGGTATTCCATGCGGCGGAAAATCGGCGGCAATAATTCTGAAGACGAACAAGGCGGTGCAACACAAGATAATGACAAAGCCGGCAGCGAAGAAATTGAAAAGGAAGCGGAAAGACGACGCCGTCGTAGCCGGCGGCGGCGGCGGCTGCGGCGGAAAGAAGGGTTGTTTTGAAGATATAAAAATGGGGCGGCGATTGAGCGAGATTTCTTCCTCTTACCAGCGAGTTTTCCCACAGGACGAAAGAGAAGCGGCAATTTTGCTCATGACCCTATCTTATGGCCTTCTTCATGGTTGAATTTTTATAATTAATTAATTATATATA

mRNA sequence

ATGGCTCCGCCTTATCACGACGACCTTCTCCGCCGTTCCTCCTCCCACCACCTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCCTCTCTTTCCCTGCCCCCGATCACTCCAACTCCGACGACCCTCGCCGGCTGCAGATCAAACACGAGAGTGAAAGCTCAAGCTGCTGTGAGAATCATAATACTCATAATGATTTGGTCAACTGGTCTTCTTCTTCTTCTTCTTCTTCTTCTAAGATTAGATTGCTGATAAATTCTAACCAAATCAACACCGCCACCCAGATGATCCACGGCGGTCGGAATTCCCATGATCTTAACCGGACAACCATGCTAAACGACGGCGCCGCCATAATCAGAACTTGTTCCGACTGTAACACCACAAAAACTCCCCTTTGGAGGAGCGGCCCAAGAGGCCCTAAGTCTCTTTGCAACGCCTGTGGAATCCGGCAGAGAAAAGCAAGACGAGCGATGGCGGAAGCGGCGGCAATGAACGGCGGTATTCCATGCGGCGGAAAATCGGCGGCAATAATTCTGAAGACGAACAAGGCGGTGCAACACAAGATAATGACAAAGCCGGCAGCGAAGAAATTGAAAAGGAAGCGGAAAGACGACGCCGTCGTAGCCGGCGGCGGCGGCGGCTGCGGCGGAAAGAAGGGTTGTTTTGAAGATATAAAAATGGGGCGGCGATTGAGCGAGATTTCTTCCTCTTACCAGCGAGTTTTCCCACAGGACGAAAGAGAAGCGGCAATTTTGCTCATGACCCTATCTTATGGCCTTCTTCATGGTTGAATTTTTATAATTAATTAATTATATATA

Coding sequence (CDS)

ATGGCTCCGCCTTATCACGACGACCTTCTCCGCCGTTCCTCCTCCCACCACCTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCCTCTCTTTCCCTGCCCCCGATCACTCCAACTCCGACGACCCTCGCCGGCTGCAGATCAAACACGAGAGTGAAAGCTCAAGCTGCTGTGAGAATCATAATACTCATAATGATTTGGTCAACTGGTCTTCTTCTTCTTCTTCTTCTTCTTCTAAGATTAGATTGCTGATAAATTCTAACCAAATCAACACCGCCACCCAGATGATCCACGGCGGTCGGAATTCCCATGATCTTAACCGGACAACCATGCTAAACGACGGCGCCGCCATAATCAGAACTTGTTCCGACTGTAACACCACAAAAACTCCCCTTTGGAGGAGCGGCCCAAGAGGCCCTAAGTCTCTTTGCAACGCCTGTGGAATCCGGCAGAGAAAAGCAAGACGAGCGATGGCGGAAGCGGCGGCAATGAACGGCGGTATTCCATGCGGCGGAAAATCGGCGGCAATAATTCTGAAGACGAACAAGGCGGTGCAACACAAGATAATGACAAAGCCGGCAGCGAAGAAATTGAAAAGGAAGCGGAAAGACGACGCCGTCGTAGCCGGCGGCGGCGGCGGCTGCGGCGGAAAGAAGGGTTGTTTTGAAGATATAAAAATGGGGCGGCGATTGAGCGAGATTTCTTCCTCTTACCAGCGAGTTTTCCCACAGGACGAAAGAGAAGCGGCAATTTTGCTCATGACCCTATCTTATGGCCTTCTTCATGGTTGA

Protein sequence

MAPPYHDDLLRRSSSHHLSSSSSSSSSSLSFPAPDHSNSDDPRRLQIKHESESSSCCENHNTHNDLVNWSSSSSSSSSKIRLLINSNQINTATQMIHGGRNSHDLNRTTMLNDGAAIIRTCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAMNGGIPCGGKSAAIILKTNKAVQHKIMTKPAAKKLKRKRKDDAVVAGGGGGCGGKKGCFEDIKMGRRLSEISSSYQRVFPQDEREAAILLMTLSYGLLHG

Homology

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BLAST of Carg13002 vs. NCBI nr
Match: KAG7023655.1 (putative GATA transcription factor 22, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 506.5 bits (1303), Expect = 1.4e-139
Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 0


Query: 1   MAPPYHDDLLRRSSSHHLSSSSSSSSSSLSFPAPDHSNSDDPRRLQIKHESESSSCCENH 60
           MAPPYHDDLLRRSSSHHLSSSSSSSSSSLSFPAPDHSNSDDPRRLQIKHESESSSCCENH
Sbjct: 1   MAPPYHDDLLRRSSSHHLSSSSSSSSSSLSFPAPDHSNSDDPRRLQIKHESESSSCCENH 60

Query: 61  NTHNDLVNWSSSSSSSSSKIRLLINSNQINTATQMIHGGRNSHDLNRTTMLNDGAAIIRT 120
           NTHNDLVNWSSSSSSSSSKIRLLINSNQINTATQMIHGGRNSHDLNRTTMLNDGAAIIRT
Sbjct: 61  NTHNDLVNWSSSSSSSSSKIRLLINSNQINTATQMIHGGRNSHDLNRTTMLNDGAAIIRT 120

Query: 121 CSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAMNGGIPCGGKSAAIILKT 180
           CSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAMNGGIPCGGKSAAIILKT
Sbjct: 121 CSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAMNGGIPCGGKSAAIILKT 180

Query: 181 NKAVQHKIMTKPAAKKLKRKRKDDAVVAGGGGGCGGKKGCFEDIKMGRRLSEISSSYQRV 240
           NKAVQHKIMTKPAAKKLKRKRKDDAVVAGGGGGCGGKKGCFEDIKMGRRLSEISSSYQRV
Sbjct: 181 NKAVQHKIMTKPAAKKLKRKRKDDAVVAGGGGGCGGKKGCFEDIKMGRRLSEISSSYQRV 240

Query: 241 FPQDEREAAILLMTLSYGLLHG 263
           FPQDEREAAILLMTLSYGLLHG
Sbjct: 241 FPQDEREAAILLMTLSYGLLHG 262

[Close]

BLAST of Carg13002 vs. NCBI nr
Match: XP_022961089.1 (GATA transcription factor 21-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 478.0 bits (1229), Expect = 5.2e-131
Identity = 251/262 (95.80%), Postives = 253/262 (96.56%), Query Frame = 0


Query: 1   MAPPYHDDLLRRSSSHHLSSSSSSSSSSLSFPAPDHSNSDDPRRLQIKHESESSSCCENH 60
           MAPPYHDDLLRRS     SSSSSSSSSSLSFPAPDHSNSDDPRRLQ+KHESESSSCCENH
Sbjct: 1   MAPPYHDDLLRRS-----SSSSSSSSSSLSFPAPDHSNSDDPRRLQLKHESESSSCCENH 60

Query: 61  NTHNDLVNWSSSSSSSSSKIRLLINSNQINTATQMIHGGRNSHDLNRTTMLNDGAAIIRT 120
           NTHNDLVNW    SSSSSKIRLLINSNQINTATQMIHGGRNSHDLNRTTMLNDGAAIIRT
Sbjct: 61  NTHNDLVNW----SSSSSKIRLLINSNQINTATQMIHGGRNSHDLNRTTMLNDGAAIIRT 120

Query: 121 CSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAMNGGIPCGGKSAAIILKT 180
           CSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAMNGGIPCGGKSAAIILKT
Sbjct: 121 CSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAMNGGIPCGGKSAAIILKT 180

Query: 181 NKAVQHKIMTKPAAKKLKRKRKDDAVVAGGGGGCGGKKGCFEDIKMGRRLSEISSSYQRV 240
           NKAVQHKIMTKPAAKKLKRKRKDDAVVAGGGGGCGGKKGCFE+IKMGRRLSEISSSYQRV
Sbjct: 181 NKAVQHKIMTKPAAKKLKRKRKDDAVVAGGGGGCGGKKGCFENIKMGRRLSEISSSYQRV 240

Query: 241 FPQDEREAAILLMTLSYGLLHG 263
           FPQDEREAAILLMTLSYGLLHG
Sbjct: 241 FPQDEREAAILLMTLSYGLLHG 253

[Close]

BLAST of Carg13002 vs. NCBI nr
Match: KAG6589991.1 (hypothetical protein SDJN03_15414, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 466.5 bits (1199), Expect = 1.6e-127
Identity = 247/261 (94.64%), Postives = 249/261 (95.40%), Query Frame = 0


Query: 1   MAPPYHDDLLRRSSSHHLSSSSSSSSSSLSFPAPDHSNSDDPRRLQIKHESESSSCCENH 60
           MAPPYHDDLLRR      SSSSSSSSSSLSFPAPDHSNSDDPRRLQ+KHESESSSCCENH
Sbjct: 1   MAPPYHDDLLRR------SSSSSSSSSSLSFPAPDHSNSDDPRRLQLKHESESSSCCENH 60

Query: 61  NTHNDLVNWSSSSSSSSSKIRLLINSNQINTATQMIHGGRNSHDLNRTTMLNDGAAIIRT 120
           NTHNDLVNW    SSSSSKIRLLINSNQINTATQMIHGGRNSHDLNRTT+LNDGAAIIRT
Sbjct: 61  NTHNDLVNW----SSSSSKIRLLINSNQINTATQMIHGGRNSHDLNRTTILNDGAAIIRT 120

Query: 121 CSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAMNGGIPCGGKSAAIILKT 180
           CSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAMNGGIPCGGKSAAIILKT
Sbjct: 121 CSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAMNGGIPCGGKSAAIILKT 180

Query: 181 NKAVQHKIMTKPAAKKLKRKRKDDAVVAGGGGGCGGKKGCFEDIKMGRRLSEISSSYQRV 240
           NKAVQHKIMTKPAAKKLKRKRKDD VVA GGGGCGGKKGCFEDIKMGRRLSEISSSYQRV
Sbjct: 181 NKAVQHKIMTKPAAKKLKRKRKDDVVVA-GGGGCGGKKGCFEDIKMGRRLSEISSSYQRV 240

Query: 241 FPQDEREAAILLMTLSYGLLH 262
           FPQDEREAAILLMTLSYGLLH
Sbjct: 241 FPQDEREAAILLMTLSYGLLH 250

[Close]

BLAST of Carg13002 vs. NCBI nr
Match: XP_022987811.1 (GATA transcription factor 21 isoform X1 [Cucurbita maxima])

HSP 1 Score: 463.8 bits (1192), Expect = 1.0e-126
Identity = 247/271 (91.14%), Postives = 252/271 (92.99%), Query Frame = 0


Query: 1   MAPPYHDDLLRRSSSHHL---------SSSSSSSSSSLSFPAPDHSNSDDPRRLQIKHES 60
           MAPPYHDDLLRRSSSHHL         SSSSSSSSSSLSFPAPDHSNSDDPRRLQ+KHES
Sbjct: 31  MAPPYHDDLLRRSSSHHLFFPTTTATSSSSSSSSSSSLSFPAPDHSNSDDPRRLQLKHES 90

Query: 61  ESSSCCENHNTHNDLVNWSSSSSSSSSKIRLLINSNQINTATQMIHGGRNSHDLNRTTML 120
           ESSSCCENHNTHNDLVNW     SSSSKIRLLINSNQINTATQMI G RNSHDLNRTTML
Sbjct: 91  ESSSCCENHNTHNDLVNW-----SSSSKIRLLINSNQINTATQMIDGARNSHDLNRTTML 150

Query: 121 NDGAAIIRTCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAMNGGIPCGG 180
           NDGAAIIRTCS+CNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAAA+NGG+PCGG
Sbjct: 151 NDGAAIIRTCSECNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAVNGGVPCGG 210

Query: 181 KSAAIILKTNKAVQHKIMTKPAAKKLKRKRKDDAVVAGGGGGCGGKKGCFEDIKMGRRLS 240
           KSAAIILKTNKAVQHKIMTKPAAKKLKRKRKDD VVA GGGG GGKKGCFEDIK+GRRLS
Sbjct: 211 KSAAIILKTNKAVQHKIMTKPAAKKLKRKRKDDVVVAAGGGG-GGKKGCFEDIKIGRRLS 270

Query: 241 EISSSYQRVFPQDEREAAILLMTLSYGLLHG 263
           EISSSYQRVFPQDEREAAILLMTLSYGLLHG
Sbjct: 271 EISSSYQRVFPQDEREAAILLMTLSYGLLHG 295

[Close]

BLAST of Carg13002 vs. NCBI nr
Match: XP_022987812.1 (GATA transcription factor 21 isoform X2 [Cucurbita maxima])

HSP 1 Score: 461.5 bits (1186), Expect = 5.0e-126
Identity = 243/262 (92.75%), Postives = 248/262 (94.66%), Query Frame = 0


Query: 1   MAPPYHDDLLRRSSSHHLSSSSSSSSSSLSFPAPDHSNSDDPRRLQIKHESESSSCCENH 60
           MAPPYHDDLLRRSSSHHL    SSSSSSLSFPAPDHSNSDDPRRLQ+KHESESSSCCENH
Sbjct: 31  MAPPYHDDLLRRSSSHHL----SSSSSSLSFPAPDHSNSDDPRRLQLKHESESSSCCENH 90

Query: 61  NTHNDLVNWSSSSSSSSSKIRLLINSNQINTATQMIHGGRNSHDLNRTTMLNDGAAIIRT 120
           NTHNDLVNW     SSSSKIRLLINSNQINTATQMI G RNSHDLNRTTMLNDGAAIIRT
Sbjct: 91  NTHNDLVNW-----SSSSKIRLLINSNQINTATQMIDGARNSHDLNRTTMLNDGAAIIRT 150

Query: 121 CSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAMNGGIPCGGKSAAIILKT 180
           CS+CNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAAA+NGG+PCGGKSAAIILKT
Sbjct: 151 CSECNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAVNGGVPCGGKSAAIILKT 210

Query: 181 NKAVQHKIMTKPAAKKLKRKRKDDAVVAGGGGGCGGKKGCFEDIKMGRRLSEISSSYQRV 240
           NKAVQHKIMTKPAAKKLKRKRKDD VVA GGGG GGKKGCFEDIK+GRRLSEISSSYQRV
Sbjct: 211 NKAVQHKIMTKPAAKKLKRKRKDDVVVAAGGGG-GGKKGCFEDIKIGRRLSEISSSYQRV 270

Query: 241 FPQDEREAAILLMTLSYGLLHG 263
           FPQDEREAAILLMTLSYGLLHG
Sbjct: 271 FPQDEREAAILLMTLSYGLLHG 282

[Close]

BLAST of Carg13002 vs. ExPASy Swiss-Prot
Match: Q5HZ36 (GATA transcription factor 21 OS=Arabidopsis thaliana OX=3702 GN=GATA21 PE=1 SV=2)

HSP 1 Score: 126.3 bits (316), Expect = 5.0e-28
Identity = 83/190 (43.68%), Postives = 101/190 (53.16%), Query Frame = 0


Query: 106 NRTTMLNDGA-----AIIRTCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEA 165
           NR   +N+        +IR CSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRA   A
Sbjct: 212 NRYNTINENGYSNNNGVIRVCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAAMAA 271

Query: 166 AAMNGGIPCGGKSAAIILKTNKAVQHKIMTK-------------PAAKKLKRKRKDD--- 225
           AA  G            L   K +Q+K                   AKK K K +++   
Sbjct: 272 AAAAGDQEVAVAPRVQQLPLKKKLQNKKKRSNGGEKYNHSPPMVAKAKKCKIKEEEEKEM 331

Query: 226 --AVVAG----------GGGGCGGKKGCFEDIKMGRRLSEISSSYQRVFPQDEREAAILL 263
               VAG                  K CF+D+ +   +   SS+YQ+VFPQDE+EAA+LL
Sbjct: 332 EAETVAGDSEISKSTTSSNSSISSNKFCFDDLTI---MLSKSSAYQQVFPQDEKEAAVLL 391

[Close]

BLAST of Carg13002 vs. ExPASy Swiss-Prot
Match: Q9SZI6 (Putative GATA transcription factor 22 OS=Arabidopsis thaliana OX=3702 GN=GATA22 PE=1 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 4.4e-24
Identity = 89/236 (37.71%), Postives = 123/236 (52.12%), Query Frame = 0


Query: 58  ENHNTHNDL-------VNWSSSSSSSSSKIRLLINSNQINTATQMIHGGRN---SHDLNR 117
           +NH    DL       +  ++S    SSK+RL+     I T +       N   S +L+ 
Sbjct: 126 DNHQDQTDLPQSPIKDMTGTNSLKWISSKVRLMKKKKAIITTSDSSKQHTNNDQSSNLSN 185

Query: 118 TTMLN--DGAAIIRTCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARR---AMAEAAA 177
           +   N  +   +IR CSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARR   A A A A
Sbjct: 186 SERQNGYNNDCVIRICSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAAMATATATA 245

Query: 178 MNGGIPCGGKS----------------AAIILKTNKAVQHKIMTKPAAKKLKRKRKDDAV 237
           ++G  P   K                 + + LK N   +   + + A  +    + +  +
Sbjct: 246 VSGVSPPVMKKKMQNKNKISNGVYKILSPLPLKVNTCKRMITLEETALAEDLETQSNSTM 305

Query: 238 VAGGGGGCGGKKGCFEDIKMGRRLSEISSSYQRVFPQDEREAAILLMTLSYGLLHG 263
           ++            F+D+ +   L   SS+YQ+VFPQDE+EAAILLM LS+G++HG
Sbjct: 306 LS------SSDNIYFDDLAL---LLSKSSAYQQVFPQDEKEAAILLMALSHGMVHG 352

[Close]

BLAST of Carg13002 vs. ExPASy Swiss-Prot
Match: Q6YW48 (Protein CYTOKININ-RESPONSIVE GATA TRANSCRIPTION FACTOR 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CGA1 PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.9e-20
Identity = 75/204 (36.76%), Postives = 90/204 (44.12%), Query Frame = 0


Query: 102 SHDLNRTTMLNDGAAIIRTCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAA 161
           +H       L     ++R CSDCNTTKTPLWRSGP GPKSLCNACGIRQRKARRAM  AA
Sbjct: 159 AHQDESQQQLQQALGVVRVCSDCNTTKTPLWRSGPCGPKSLCNACGIRQRKARRAM--AA 218

Query: 162 AMNGGIPCGGKSAAIILKTNKAVQHKIMTKPAAKKLKR---------------------- 221
           A NGG        A +          +  KPAAKK KR                      
Sbjct: 219 AANGG--------AAVAPAKSVAAAPVNNKPAAKKEKRAADVDRSLPFKKRCKMVDHVAA 278

Query: 222 ------------------KRKDDAVVAGGGGGCGGKKGCFEDIKMGRRLSEISSSYQRVF 262
                             K +D  +V GG             I      +  +++    F
Sbjct: 279 AVAATKPTAAGEVVAAAPKDQDHVIVVGGENAAATSMPAQNPISKAAATAAAAAASPAFF 338

[Close]

BLAST of Carg13002 vs. ExPASy Swiss-Prot
Match: Q6L5E5 (GATA transcription factor 15 OS=Oryza sativa subsp. japonica OX=39947 GN=GATA15 PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 4.2e-11
Identity = 43/102 (42.16%), Postives = 52/102 (50.98%), Query Frame = 0


Query: 115 AAIIRTCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRK-ARRAMAEAAAMNGGIPCGGKS 174
           A + R C++C T  TPLWR+GPRGPKSLCNACGIR +K  RRA A     +G   CG   
Sbjct: 148 ALLDRRCANCGTASTPLWRNGPRGPKSLCNACGIRYKKEERRAAATTTTADGAAGCG--- 207

Query: 175 AAIILKTNKAVQHKIMTKPAAKKLKRKRKDDAVVAGGGGGCG 216
                 T +  +     K A        +    V GGGGG G
Sbjct: 208 ----FITAQRGRGSTAAKAAPAVTTCGEETSPYVVGGGGGGG 242

[Close]

BLAST of Carg13002 vs. ExPASy Swiss-Prot
Match: Q9FJ10 (GATA transcription factor 16 OS=Arabidopsis thaliana OX=3702 GN=GATA16 PE=2 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 7.2e-11
Identity = 62/187 (33.16%), Postives = 83/187 (44.39%), Query Frame = 0


Query: 77  SSKIRLLINSNQINTATQMIHGGRNSHDLNRTTMLNDGAAIIRTCSDCNTTKTPLWRSGP 136
           S K+ L+ +      A  MI            T +ND     +TC+DC T+KTPLWR GP
Sbjct: 5   SEKVLLVDSETMKTRAEDMIE--------QNNTSVNDKK---KTCADCGTSKTPLWRGGP 64

Query: 137 RGPKSLCNACGIRQRKARRAMAEAAAMNGGIPCGGKSAAIILKTNKAVQHKIMTKPAAKK 196
            GPKSLCNACGIR RK RR   E                                   KK
Sbjct: 65  VGPKSLCNACGIRNRKKRRGGTE---------------------------------DNKK 124

Query: 197 LKRKRKDDAVVAGGGGGCGGK--KGCFEDIKMGRRLSEISSSYQRVFPQDEREAAILLMT 256
           LK+        +GGG    G+  K    D+ + R+ S +    Q++   +E +AA+LLM 
Sbjct: 125 LKKSS------SGGGNRKFGESLKQSLMDLGI-RKRSTVEKQRQKL--GEEEQAAVLLMA 138

Query: 257 LSYGLLH 262
           LSYG ++
Sbjct: 185 LSYGSVY 138

[Close]

BLAST of Carg13002 vs. ExPASy TrEMBL
Match: A0A6J1HCZ1 (GATA transcription factor 21-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461705 PE=4 SV=1)

HSP 1 Score: 478.0 bits (1229), Expect = 2.5e-131
Identity = 251/262 (95.80%), Postives = 253/262 (96.56%), Query Frame = 0


Query: 1   MAPPYHDDLLRRSSSHHLSSSSSSSSSSLSFPAPDHSNSDDPRRLQIKHESESSSCCENH 60
           MAPPYHDDLLRRS     SSSSSSSSSSLSFPAPDHSNSDDPRRLQ+KHESESSSCCENH
Sbjct: 1   MAPPYHDDLLRRS-----SSSSSSSSSSLSFPAPDHSNSDDPRRLQLKHESESSSCCENH 60

Query: 61  NTHNDLVNWSSSSSSSSSKIRLLINSNQINTATQMIHGGRNSHDLNRTTMLNDGAAIIRT 120
           NTHNDLVNW    SSSSSKIRLLINSNQINTATQMIHGGRNSHDLNRTTMLNDGAAIIRT
Sbjct: 61  NTHNDLVNW----SSSSSKIRLLINSNQINTATQMIHGGRNSHDLNRTTMLNDGAAIIRT 120

Query: 121 CSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAMNGGIPCGGKSAAIILKT 180
           CSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAMNGGIPCGGKSAAIILKT
Sbjct: 121 CSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAMNGGIPCGGKSAAIILKT 180

Query: 181 NKAVQHKIMTKPAAKKLKRKRKDDAVVAGGGGGCGGKKGCFEDIKMGRRLSEISSSYQRV 240
           NKAVQHKIMTKPAAKKLKRKRKDDAVVAGGGGGCGGKKGCFE+IKMGRRLSEISSSYQRV
Sbjct: 181 NKAVQHKIMTKPAAKKLKRKRKDDAVVAGGGGGCGGKKGCFENIKMGRRLSEISSSYQRV 240

Query: 241 FPQDEREAAILLMTLSYGLLHG 263
           FPQDEREAAILLMTLSYGLLHG
Sbjct: 241 FPQDEREAAILLMTLSYGLLHG 253

[Close]

BLAST of Carg13002 vs. ExPASy TrEMBL
Match: A0A6J1JFE1 (GATA transcription factor 21 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485245 PE=4 SV=1)

HSP 1 Score: 463.8 bits (1192), Expect = 4.9e-127
Identity = 247/271 (91.14%), Postives = 252/271 (92.99%), Query Frame = 0


Query: 1   MAPPYHDDLLRRSSSHHL---------SSSSSSSSSSLSFPAPDHSNSDDPRRLQIKHES 60
           MAPPYHDDLLRRSSSHHL         SSSSSSSSSSLSFPAPDHSNSDDPRRLQ+KHES
Sbjct: 31  MAPPYHDDLLRRSSSHHLFFPTTTATSSSSSSSSSSSLSFPAPDHSNSDDPRRLQLKHES 90

Query: 61  ESSSCCENHNTHNDLVNWSSSSSSSSSKIRLLINSNQINTATQMIHGGRNSHDLNRTTML 120
           ESSSCCENHNTHNDLVNW     SSSSKIRLLINSNQINTATQMI G RNSHDLNRTTML
Sbjct: 91  ESSSCCENHNTHNDLVNW-----SSSSKIRLLINSNQINTATQMIDGARNSHDLNRTTML 150

Query: 121 NDGAAIIRTCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAMNGGIPCGG 180
           NDGAAIIRTCS+CNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAAA+NGG+PCGG
Sbjct: 151 NDGAAIIRTCSECNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAVNGGVPCGG 210

Query: 181 KSAAIILKTNKAVQHKIMTKPAAKKLKRKRKDDAVVAGGGGGCGGKKGCFEDIKMGRRLS 240
           KSAAIILKTNKAVQHKIMTKPAAKKLKRKRKDD VVA GGGG GGKKGCFEDIK+GRRLS
Sbjct: 211 KSAAIILKTNKAVQHKIMTKPAAKKLKRKRKDDVVVAAGGGG-GGKKGCFEDIKIGRRLS 270

Query: 241 EISSSYQRVFPQDEREAAILLMTLSYGLLHG 263
           EISSSYQRVFPQDEREAAILLMTLSYGLLHG
Sbjct: 271 EISSSYQRVFPQDEREAAILLMTLSYGLLHG 295

[Close]

BLAST of Carg13002 vs. ExPASy TrEMBL
Match: A0A6J1JBE0 (GATA transcription factor 21 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485245 PE=4 SV=1)

HSP 1 Score: 461.5 bits (1186), Expect = 2.4e-126
Identity = 243/262 (92.75%), Postives = 248/262 (94.66%), Query Frame = 0


Query: 1   MAPPYHDDLLRRSSSHHLSSSSSSSSSSLSFPAPDHSNSDDPRRLQIKHESESSSCCENH 60
           MAPPYHDDLLRRSSSHHL    SSSSSSLSFPAPDHSNSDDPRRLQ+KHESESSSCCENH
Sbjct: 31  MAPPYHDDLLRRSSSHHL----SSSSSSLSFPAPDHSNSDDPRRLQLKHESESSSCCENH 90

Query: 61  NTHNDLVNWSSSSSSSSSKIRLLINSNQINTATQMIHGGRNSHDLNRTTMLNDGAAIIRT 120
           NTHNDLVNW     SSSSKIRLLINSNQINTATQMI G RNSHDLNRTTMLNDGAAIIRT
Sbjct: 91  NTHNDLVNW-----SSSSKIRLLINSNQINTATQMIDGARNSHDLNRTTMLNDGAAIIRT 150

Query: 121 CSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAMNGGIPCGGKSAAIILKT 180
           CS+CNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAAA+NGG+PCGGKSAAIILKT
Sbjct: 151 CSECNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAVNGGVPCGGKSAAIILKT 210

Query: 181 NKAVQHKIMTKPAAKKLKRKRKDDAVVAGGGGGCGGKKGCFEDIKMGRRLSEISSSYQRV 240
           NKAVQHKIMTKPAAKKLKRKRKDD VVA GGGG GGKKGCFEDIK+GRRLSEISSSYQRV
Sbjct: 211 NKAVQHKIMTKPAAKKLKRKRKDDVVVAAGGGG-GGKKGCFEDIKIGRRLSEISSSYQRV 270

Query: 241 FPQDEREAAILLMTLSYGLLHG 263
           FPQDEREAAILLMTLSYGLLHG
Sbjct: 271 FPQDEREAAILLMTLSYGLLHG 282

[Close]

BLAST of Carg13002 vs. ExPASy TrEMBL
Match: A0A6J1JKI4 (GATA transcription factor 21 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111485245 PE=4 SV=1)

HSP 1 Score: 455.7 bits (1171), Expect = 1.3e-124
Identity = 242/262 (92.37%), Postives = 247/262 (94.27%), Query Frame = 0


Query: 1   MAPPYHDDLLRRSSSHHLSSSSSSSSSSLSFPAPDHSNSDDPRRLQIKHESESSSCCENH 60
           MAPPYHDDLLRRS     SSSSSSSSSSLSFPAPDHSNSDDPRRLQ+KHESESSSCCENH
Sbjct: 31  MAPPYHDDLLRRS-----SSSSSSSSSSLSFPAPDHSNSDDPRRLQLKHESESSSCCENH 90

Query: 61  NTHNDLVNWSSSSSSSSSKIRLLINSNQINTATQMIHGGRNSHDLNRTTMLNDGAAIIRT 120
           NTHNDLVNW     SSSSKIRLLINSNQINTATQMI G RNSHDLNRTTMLNDGAAIIRT
Sbjct: 91  NTHNDLVNW-----SSSSKIRLLINSNQINTATQMIDGARNSHDLNRTTMLNDGAAIIRT 150

Query: 121 CSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAMNGGIPCGGKSAAIILKT 180
           CS+CNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAAA+NGG+PCGGKSAAIILKT
Sbjct: 151 CSECNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAVNGGVPCGGKSAAIILKT 210

Query: 181 NKAVQHKIMTKPAAKKLKRKRKDDAVVAGGGGGCGGKKGCFEDIKMGRRLSEISSSYQRV 240
           NKAVQHKIMTKPAAKKLKRKRKDD VVA GGGG GGKKGCFEDIK+GRRLSEISSSYQRV
Sbjct: 211 NKAVQHKIMTKPAAKKLKRKRKDDVVVAAGGGG-GGKKGCFEDIKIGRRLSEISSSYQRV 270

Query: 241 FPQDEREAAILLMTLSYGLLHG 263
           FPQDEREAAILLMTLSYGLLHG
Sbjct: 271 FPQDEREAAILLMTLSYGLLHG 281

[Close]

BLAST of Carg13002 vs. ExPASy TrEMBL
Match: A0A6J1H9D5 (GATA transcription factor 21-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111461705 PE=4 SV=1)

HSP 1 Score: 420.2 bits (1079), Expect = 6.2e-114
Identity = 226/262 (86.26%), Postives = 228/262 (87.02%), Query Frame = 0


Query: 1   MAPPYHDDLLRRSSSHHLSSSSSSSSSSLSFPAPDHSNSDDPRRLQIKHESESSSCCENH 60
           MAPPYHDDLLRRS     SSSSSSSSSSLSFPAPDHSNSDDPRRLQ+KHE          
Sbjct: 1   MAPPYHDDLLRRS-----SSSSSSSSSSLSFPAPDHSNSDDPRRLQLKHE---------- 60

Query: 61  NTHNDLVNWSSSSSSSSSKIRLLINSNQINTATQMIHGGRNSHDLNRTTMLNDGAAIIRT 120
                              IRLLINSNQINTATQMIHGGRNSHDLNRTTMLNDGAAIIRT
Sbjct: 61  -------------------IRLLINSNQINTATQMIHGGRNSHDLNRTTMLNDGAAIIRT 120

Query: 121 CSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAMNGGIPCGGKSAAIILKT 180
           CSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAMNGGIPCGGKSAAIILKT
Sbjct: 121 CSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAMNGGIPCGGKSAAIILKT 180

Query: 181 NKAVQHKIMTKPAAKKLKRKRKDDAVVAGGGGGCGGKKGCFEDIKMGRRLSEISSSYQRV 240
           NKAVQHKIMTKPAAKKLKRKRKDDAVVAGGGGGCGGKKGCFE+IKMGRRLSEISSSYQRV
Sbjct: 181 NKAVQHKIMTKPAAKKLKRKRKDDAVVAGGGGGCGGKKGCFENIKMGRRLSEISSSYQRV 228

Query: 241 FPQDEREAAILLMTLSYGLLHG 263
           FPQDEREAAILLMTLSYGLLHG
Sbjct: 241 FPQDEREAAILLMTLSYGLLHG 228

[Close]

BLAST of Carg13002 vs. TAIR 10
Match: AT5G56860.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 126.3 bits (316), Expect = 3.5e-29
Identity = 83/190 (43.68%), Postives = 101/190 (53.16%), Query Frame = 0


Query: 106 NRTTMLNDGA-----AIIRTCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEA 165
           NR   +N+        +IR CSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRA   A
Sbjct: 212 NRYNTINENGYSNNNGVIRVCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAAMAA 271

Query: 166 AAMNGGIPCGGKSAAIILKTNKAVQHKIMTK-------------PAAKKLKRKRKDD--- 225
           AA  G            L   K +Q+K                   AKK K K +++   
Sbjct: 272 AAAAGDQEVAVAPRVQQLPLKKKLQNKKKRSNGGEKYNHSPPMVAKAKKCKIKEEEEKEM 331

Query: 226 --AVVAG----------GGGGCGGKKGCFEDIKMGRRLSEISSSYQRVFPQDEREAAILL 263
               VAG                  K CF+D+ +   +   SS+YQ+VFPQDE+EAA+LL
Sbjct: 332 EAETVAGDSEISKSTTSSNSSISSNKFCFDDLTI---MLSKSSAYQQVFPQDEKEAAVLL 391

[Close]

BLAST of Carg13002 vs. TAIR 10
Match: AT4G26150.1 (cytokinin-responsive gata factor 1 )

HSP 1 Score: 113.2 bits (282), Expect = 3.1e-25
Identity = 89/236 (37.71%), Postives = 123/236 (52.12%), Query Frame = 0


Query: 58  ENHNTHNDL-------VNWSSSSSSSSSKIRLLINSNQINTATQMIHGGRN---SHDLNR 117
           +NH    DL       +  ++S    SSK+RL+     I T +       N   S +L+ 
Sbjct: 126 DNHQDQTDLPQSPIKDMTGTNSLKWISSKVRLMKKKKAIITTSDSSKQHTNNDQSSNLSN 185

Query: 118 TTMLN--DGAAIIRTCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARR---AMAEAAA 177
           +   N  +   +IR CSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARR   A A A A
Sbjct: 186 SERQNGYNNDCVIRICSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAAMATATATA 245

Query: 178 MNGGIPCGGKS----------------AAIILKTNKAVQHKIMTKPAAKKLKRKRKDDAV 237
           ++G  P   K                 + + LK N   +   + + A  +    + +  +
Sbjct: 246 VSGVSPPVMKKKMQNKNKISNGVYKILSPLPLKVNTCKRMITLEETALAEDLETQSNSTM 305

Query: 238 VAGGGGGCGGKKGCFEDIKMGRRLSEISSSYQRVFPQDEREAAILLMTLSYGLLHG 263
           ++            F+D+ +   L   SS+YQ+VFPQDE+EAAILLM LS+G++HG
Sbjct: 306 LS------SSDNIYFDDLAL---LLSKSSAYQQVFPQDEKEAAILLMALSHGMVHG 352

[Close]

BLAST of Carg13002 vs. TAIR 10
Match: AT5G26930.1 (GATA transcription factor 23 )

HSP 1 Score: 71.6 bits (174), Expect = 1.0e-12
Identity = 30/39 (76.92%), Postives = 33/39 (84.62%), Query Frame = 0


Query: 118 IRTCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRA 157
           IR CS+C TTKTP+WR GP GPKSLCNACGIR RK RR+
Sbjct: 25  IRCCSECKTTKTPMWRGGPTGPKSLCNACGIRHRKQRRS 63

[Close]

BLAST of Carg13002 vs. TAIR 10
Match: AT5G49300.1 (GATA transcription factor 16 )

HSP 1 Score: 69.3 bits (168), Expect = 5.1e-12
Identity = 62/187 (33.16%), Postives = 83/187 (44.39%), Query Frame = 0


Query: 77  SSKIRLLINSNQINTATQMIHGGRNSHDLNRTTMLNDGAAIIRTCSDCNTTKTPLWRSGP 136
           S K+ L+ +      A  MI            T +ND     +TC+DC T+KTPLWR GP
Sbjct: 5   SEKVLLVDSETMKTRAEDMIE--------QNNTSVNDKK---KTCADCGTSKTPLWRGGP 64

Query: 137 RGPKSLCNACGIRQRKARRAMAEAAAMNGGIPCGGKSAAIILKTNKAVQHKIMTKPAAKK 196
            GPKSLCNACGIR RK RR   E                                   KK
Sbjct: 65  VGPKSLCNACGIRNRKKRRGGTE---------------------------------DNKK 124

Query: 197 LKRKRKDDAVVAGGGGGCGGK--KGCFEDIKMGRRLSEISSSYQRVFPQDEREAAILLMT 256
           LK+        +GGG    G+  K    D+ + R+ S +    Q++   +E +AA+LLM 
Sbjct: 125 LKKSS------SGGGNRKFGESLKQSLMDLGI-RKRSTVEKQRQKL--GEEEQAAVLLMA 138

Query: 257 LSYGLLH 262
           LSYG ++
Sbjct: 185 LSYGSVY 138

[Close]

BLAST of Carg13002 vs. TAIR 10
Match: AT2G18380.1 (GATA transcription factor 20 )

HSP 1 Score: 68.6 bits (166), Expect = 8.8e-12
Identity = 54/134 (40.30%), Postives = 71/134 (52.99%), Query Frame = 0


Query: 58  ENHNTHNDLVNWSSSS------SSSSSKIRL-------LINSNQINTATQMIHGGRNSHD 117
           +NH+ ++   N+SSS+      S  +   RL         NSN I +    IHGG     
Sbjct: 21  QNHHNYDPYNNFSSSTSVDCTLSLGTPSTRLDDHHRFSSANSNNI-SGDFYIHGGN---- 80

Query: 118 LNRTTMLNDGA---AIIRTCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAA 176
             +T+    G    ++ R C+ C+TT TPLWR+GP+GPKSLCNACGIR +K  R    A 
Sbjct: 81  -AKTSSYKKGGVAHSLPRRCASCDTTSTPLWRNGPKGPKSLCNACGIRFKKEER---RAT 140

The following BLAST results are available for this feature:

BLAST of Carg13002 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7023655.1	1.4e-139	100.00	putative GATA transcription factor 22, partial [Cucurbita argyrosperma subsp. ar...	[more]
XP_022961089.1	5.2e-131	95.80	GATA transcription factor 21-like isoform X1 [Cucurbita moschata]	[more]
KAG6589991.1	1.6e-127	94.64	hypothetical protein SDJN03_15414, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022987811.1	1.0e-126	91.14	GATA transcription factor 21 isoform X1 [Cucurbita maxima]	[more]
XP_022987812.1	5.0e-126	92.75	GATA transcription factor 21 isoform X2 [Cucurbita maxima]	[more]

BLAST of Carg13002 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5HZ36	5.0e-28	43.68	GATA transcription factor 21 OS=Arabidopsis thaliana OX=3702 GN=GATA21 PE=1 SV=2	[more]
Q9SZI6	4.4e-24	37.71	Putative GATA transcription factor 22 OS=Arabidopsis thaliana OX=3702 GN=GATA22 ...	[more]
Q6YW48	2.9e-20	36.76	Protein CYTOKININ-RESPONSIVE GATA TRANSCRIPTION FACTOR 1 OS=Oryza sativa subsp. ...	[more]
Q6L5E5	4.2e-11	42.16	GATA transcription factor 15 OS=Oryza sativa subsp. japonica OX=39947 GN=GATA15 ...	[more]
Q9FJ10	7.2e-11	33.16	GATA transcription factor 16 OS=Arabidopsis thaliana OX=3702 GN=GATA16 PE=2 SV=1	[more]

BLAST of Carg13002 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HCZ1	2.5e-131	95.80	GATA transcription factor 21-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1JFE1	4.9e-127	91.14	GATA transcription factor 21 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485...	[more]
A0A6J1JBE0	2.4e-126	92.75	GATA transcription factor 21 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485...	[more]
A0A6J1JKI4	1.3e-124	92.37	GATA transcription factor 21 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111485...	[more]
A0A6J1H9D5	6.2e-114	86.26	GATA transcription factor 21-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of Carg13002 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G56860.1	3.5e-29	43.68	GATA type zinc finger transcription factor family protein	[more]
AT4G26150.1	3.1e-25	37.71	cytokinin-responsive gata factor 1	[more]
AT5G26930.1	1.0e-12	76.92	GATA transcription factor 23	[more]
AT5G49300.1	5.1e-12	33.16	GATA transcription factor 16	[more]
AT2G18380.1	8.8e-12	40.30	GATA transcription factor 20	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000679	Zinc finger, GATA-type	SMART	SM00401	GATA_3	coord: 115..167 e-value: 6.8E-20 score: 82.1
IPR000679	Zinc finger, GATA-type	PFAM	PF00320	GATA	coord: 121..154 e-value: 3.9E-17 score: 61.6
IPR000679	Zinc finger, GATA-type	PROSITE	PS00344	GATA_ZN_FINGER_1	coord: 121..146
IPR000679	Zinc finger, GATA-type	PROSITE	PS50114	GATA_ZN_FINGER_2	coord: 119..151 score: 12.650496
IPR000679	Zinc finger, GATA-type	CDD	cd00202	ZnF_GATA	coord: 120..152 e-value: 1.57352E-13 score: 61.6198
IPR013088	Zinc finger, NHR/GATA-type	GENE3D	3.30.50.10		coord: 117..160 e-value: 4.0E-15 score: 57.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..35
None	No IPR available	PANTHER	PTHR47255	GATA TRANSCRIPTION FACTOR 22-RELATED	coord: 16..262
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 117..154

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg13002-RA	Carg13002-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0008270	zinc ion binding