Carg12949 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg12949
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Protein of unknown function (DUF1677)
Location	Carg_Chr10: 3602982 .. 3604187 (-)
RNA-Seq Expression	Carg12949
Synteny	Carg12949

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGCTGGCGATGACGTTGCCAAACTCCGACTCTCAGGCGGCGGCGGCGGTGGAGTGTACGGCGGAGGTCAAGTGTGTGAAATGCTATTCCTGCGGATTTACAGAGGATTGCACCCCTGCTTACATTTCTCGAGTTCGTGATCGCTTCCATGGGCGGTGGATCTGTGGGCTCTGCATCGAGGCGGTGAAAGACGAAGTTGTGAGGTCGGGGACGCTTATCTCCACCGAAGAAGCGCTGAGCCGACACGCGAGTTTCTGCAGAGAGTTCAGATCGACGAACCCCCTGGATGAAACAGAGCACCCCATCTCCGCCATGGGGCGACTACTACGGCGGAGGTTGGATTCTCCCAGAGTGCTCCGGTCGAATTCTAGCCGTGTAATCAAACTCAAACCGATTGTCGACATCGGTGGTCCGGCCAGACTCCAACGTTCCGGGAGTTGCTTTCCTTCCTTGTCTAGTTAAAAAAAAACAGAGTAACATGTTCAAGCTTCTAACTTGCTTTAATGGGTGGTTTCAATTCGAATTCTCCCATGATTTTCATCTCATTTAAACAAATGGGTGTCAGAATCTGAGGAGTAAACTGACAATTTCTAGCGTTCTGATTCGTAAATTTCATCTTAGTTTTCGTGTTTGTAAATCGTAACGAAACAGAGTATGTTTATGTTTGCTTGAAAAGTTGAAAGGGAAATGAATCGAAGTGTGTAGATTGATCAATGAATGAAAACGCGTTGAAACGAATGGAAAAAAGTTGAGAAGATCGAAGAATGTTGCGTTGGCGATCGTGTAAGCACTGCGCTGTTGCCATTGTCTGAGGTATGAAGCTCTGTTTTGGGTAATTCAGTTATGGAAGTGGCTGGCAATGGTTATGCTTTCTTGTCTGTTTTGGAGAGAGAGTCAGGTGTGCCAGCTCGCATGGAATTTATGATAATTAATTGGCTAGGTTACATTTTTTTTAATCCCAGTAAAAAAGAATAATAATAATAATAATCCCAGTAAAAAAATATTTTTATCGACCTACTCGAACATACATCAATCAGTTAAGGTTTAAACAAGTAGTAAGGATTCGAACATGTGGGTAAAATTGTTTGATCATACGAGTTGTAGAAGTCCGTGTACAAAGATTTTTTATTTTTTTAATTTGCAGAGTCGGAGTTCCTTGGAGATCCACCCTAAATAAGGCATGGAACGGGAGAACCCTAAACA

mRNA sequence

ATGCTGCTGGCGATGACGTTGCCAAACTCCGACTCTCAGGCGGCGGCGGCGGTGGAGTGTACGGCGGAGGTCAAGTGTGTGAAATGCTATTCCTGCGGATTTACAGAGGATTGCACCCCTGCTTACATTTCTCGAGTTCGTGATCGCTTCCATGGGCGGTGGATCTGTGGGCTCTGCATCGAGGCGGTGAAAGACGAAGTTGTGAGGTCGGGGACGCTTATCTCCACCGAAGAAGCGCTGAGCCGACACGCGAGTTTCTGCAGAGAGTTCAGATCGACGAACCCCCTGGATGAAACAGAGCACCCCATCTCCGCCATGGGGCGACTACTACGGCGGAGGTTGGATTCTCCCAGAGTGCTCCGGTCGAATTCTAGCCGTGTAATCAAACTCAAACCGATTGTCGACATCGGTGGTCCGGCCAGACTCCAACGTTCCGGGAGTTGCTTTCCTTCCTTGTCTATTGAGAAGATCGAAGAATGTTGCGTTGGCGATCGTGTAAGCACTGCGCTGTTGCCATTGTCTGAGAGTCGGAGTTCCTTGGAGATCCACCCTAAATAAGGCATGGAACGGGAGAACCCTAAACA

Coding sequence (CDS)

ATGCTGCTGGCGATGACGTTGCCAAACTCCGACTCTCAGGCGGCGGCGGCGGTGGAGTGTACGGCGGAGGTCAAGTGTGTGAAATGCTATTCCTGCGGATTTACAGAGGATTGCACCCCTGCTTACATTTCTCGAGTTCGTGATCGCTTCCATGGGCGGTGGATCTGTGGGCTCTGCATCGAGGCGGTGAAAGACGAAGTTGTGAGGTCGGGGACGCTTATCTCCACCGAAGAAGCGCTGAGCCGACACGCGAGTTTCTGCAGAGAGTTCAGATCGACGAACCCCCTGGATGAAACAGAGCACCCCATCTCCGCCATGGGGCGACTACTACGGCGGAGGTTGGATTCTCCCAGAGTGCTCCGGTCGAATTCTAGCCGTGTAATCAAACTCAAACCGATTGTCGACATCGGTGGTCCGGCCAGACTCCAACGTTCCGGGAGTTGCTTTCCTTCCTTGTCTATTGAGAAGATCGAAGAATGTTGCGTTGGCGATCGTGTAAGCACTGCGCTGTTGCCATTGTCTGAGAGTCGGAGTTCCTTGGAGATCCACCCTAAATAA

Protein sequence

MLLAMTLPNSDSQAAAAVECTAEVKCVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCIEAVKDEVVRSGTLISTEEALSRHASFCREFRSTNPLDETEHPISAMGRLLRRRLDSPRVLRSNSSRVIKLKPIVDIGGPARLQRSGSCFPSLSIEKIEECCVGDRVSTALLPLSESRSSLEIHPK

Homology

[Close]

BLAST of Carg12949 vs. NCBI nr
Match: KAG7023708.1 (hypothetical protein SDJN02_14734, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 374.0 bits (959), Expect = 7.4e-100
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MLLAMTLPNSDSQAAAAVECTAEVKCVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCI 60
           MLLAMTLPNSDSQAAAAVECTAEVKCVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCI
Sbjct: 1   MLLAMTLPNSDSQAAAAVECTAEVKCVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCI 60

Query: 61  EAVKDEVVRSGTLISTEEALSRHASFCREFRSTNPLDETEHPISAMGRLLRRRLDSPRVL 120
           EAVKDEVVRSGTLISTEEALSRHASFCREFRSTNPLDETEHPISAMGRLLRRRLDSPRVL
Sbjct: 61  EAVKDEVVRSGTLISTEEALSRHASFCREFRSTNPLDETEHPISAMGRLLRRRLDSPRVL 120

Query: 121 RSNSSRVIKLKPIVDIGGPARLQRSGSCFPSLSIEKIEECCVGDRVSTALLPLSESRSSL 180
           RSNSSRVIKLKPIVDIGGPARLQRSGSCFPSLSIEKIEECCVGDRVSTALLPLSESRSSL
Sbjct: 121 RSNSSRVIKLKPIVDIGGPARLQRSGSCFPSLSIEKIEECCVGDRVSTALLPLSESRSSL 180

Query: 181 EIHPK 186
           EIHPK
Sbjct: 181 EIHPK 185

[Close]

BLAST of Carg12949 vs. NCBI nr
Match: XP_023516156.1 (uncharacterized protein LOC111780103 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 307.4 bits (786), Expect = 8.5e-80
Identity = 151/153 (98.69%), Postives = 151/153 (98.69%), Query Frame = 0


Query: 1   MLLAMTLPNSDSQAAAAVECTAEVKCVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCI 60
           MLLAM LPNSDSQAAAAVECTAEVKCVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCI
Sbjct: 1   MLLAMALPNSDSQAAAAVECTAEVKCVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCI 60

Query: 61  EAVKDEVVRSGTLISTEEALSRHASFCREFRSTNPLDETEHPISAMGRLLRRRLDSPRVL 120
           EAVKDEVVRSGTLISTEEAL RHASFCREFRSTNPLDETEHPISAMGRLLRRRLDSPRVL
Sbjct: 61  EAVKDEVVRSGTLISTEEALIRHASFCREFRSTNPLDETEHPISAMGRLLRRRLDSPRVL 120

Query: 121 RSNSSRVIKLKPIVDIGGPARLQRSGSCFPSLS 154
           RSNSSRVIKLKPIVDIGGPARLQRSGSCFPSLS
Sbjct: 121 RSNSSRVIKLKPIVDIGGPARLQRSGSCFPSLS 153

[Close]

BLAST of Carg12949 vs. NCBI nr
Match: KAG6590044.1 (hypothetical protein SDJN03_15467, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 306.6 bits (784), Expect = 1.5e-79
Identity = 151/153 (98.69%), Postives = 151/153 (98.69%), Query Frame = 0


Query: 1   MLLAMTLPNSDSQAAAAVECTAEVKCVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCI 60
           MLLAM L NSDSQAAAAVECTAEVKCVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCI
Sbjct: 1   MLLAMALSNSDSQAAAAVECTAEVKCVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCI 60

Query: 61  EAVKDEVVRSGTLISTEEALSRHASFCREFRSTNPLDETEHPISAMGRLLRRRLDSPRVL 120
           EAVKDEVVRSGTLISTEEALSRHASFCREFRSTNPLDETEHPISAMGRLLRRRLDSPRVL
Sbjct: 61  EAVKDEVVRSGTLISTEEALSRHASFCREFRSTNPLDETEHPISAMGRLLRRRLDSPRVL 120

Query: 121 RSNSSRVIKLKPIVDIGGPARLQRSGSCFPSLS 154
           RSNSSRVIKLKPIVDIGGPARLQRSGSCFPSLS
Sbjct: 121 RSNSSRVIKLKPIVDIGGPARLQRSGSCFPSLS 153

[Close]

BLAST of Carg12949 vs. NCBI nr
Match: XP_022960603.1 (uncharacterized protein LOC111461338 [Cucurbita moschata])

HSP 1 Score: 303.5 bits (776), Expect = 1.2e-78
Identity = 148/149 (99.33%), Postives = 148/149 (99.33%), Query Frame = 0


Query: 5   MTLPNSDSQAAAAVECTAEVKCVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCIEAVK 64
           M LPNSDSQAAAAVECTAEVKCVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCIEAVK
Sbjct: 1   MALPNSDSQAAAAVECTAEVKCVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCIEAVK 60

Query: 65  DEVVRSGTLISTEEALSRHASFCREFRSTNPLDETEHPISAMGRLLRRRLDSPRVLRSNS 124
           DEVVRSGTLISTEEALSRHASFCREFRSTNPLDETEHPISAMGRLLRRRLDSPRVLRSNS
Sbjct: 61  DEVVRSGTLISTEEALSRHASFCREFRSTNPLDETEHPISAMGRLLRRRLDSPRVLRSNS 120

Query: 125 SRVIKLKPIVDIGGPARLQRSGSCFPSLS 154
           SRVIKLKPIVDIGGPARLQRSGSCFPSLS
Sbjct: 121 SRVIKLKPIVDIGGPARLQRSGSCFPSLS 149

[Close]

BLAST of Carg12949 vs. NCBI nr
Match: XP_022987087.1 (uncharacterized protein LOC111484741 [Cucurbita maxima])

HSP 1 Score: 292.7 bits (748), Expect = 2.2e-75
Identity = 146/153 (95.42%), Postives = 148/153 (96.73%), Query Frame = 0


Query: 1   MLLAMTLPNSDSQAAAAVECTAEVKCVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCI 60
           MLLAM LPNSDSQAAAA ECT EVKCVKCYSCGF+EDCTPAYISRVRDRFHGRWICGLCI
Sbjct: 1   MLLAMALPNSDSQAAAA-ECTVEVKCVKCYSCGFSEDCTPAYISRVRDRFHGRWICGLCI 60

Query: 61  EAVKDEVVRSGTLISTEEALSRHASFCREFRSTNPLDETEHPISAMGRLLRRRLDSPRVL 120
           EAVKDEVVRSGTLISTEEAL RHASFCREFRSTNPLDETE+PISAMGRLLRRRLDSPRVL
Sbjct: 61  EAVKDEVVRSGTLISTEEALIRHASFCREFRSTNPLDETEYPISAMGRLLRRRLDSPRVL 120

Query: 121 RSNSSRVIKLKPIVDIGGPARLQRSGSCFPSLS 154
           RSNSSRVIKLKPIVDIGG ARLQRSGSCFPSLS
Sbjct: 121 RSNSSRVIKLKPIVDIGGSARLQRSGSCFPSLS 152

[Close]

BLAST of Carg12949 vs. ExPASy TrEMBL
Match: A0A6J1H9F8 (uncharacterized protein LOC111461338 OS=Cucurbita moschata OX=3662 GN=LOC111461338 PE=4 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 5.9e-79
Identity = 148/149 (99.33%), Postives = 148/149 (99.33%), Query Frame = 0


Query: 5   MTLPNSDSQAAAAVECTAEVKCVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCIEAVK 64
           M LPNSDSQAAAAVECTAEVKCVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCIEAVK
Sbjct: 1   MALPNSDSQAAAAVECTAEVKCVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCIEAVK 60

Query: 65  DEVVRSGTLISTEEALSRHASFCREFRSTNPLDETEHPISAMGRLLRRRLDSPRVLRSNS 124
           DEVVRSGTLISTEEALSRHASFCREFRSTNPLDETEHPISAMGRLLRRRLDSPRVLRSNS
Sbjct: 61  DEVVRSGTLISTEEALSRHASFCREFRSTNPLDETEHPISAMGRLLRRRLDSPRVLRSNS 120

Query: 125 SRVIKLKPIVDIGGPARLQRSGSCFPSLS 154
           SRVIKLKPIVDIGGPARLQRSGSCFPSLS
Sbjct: 121 SRVIKLKPIVDIGGPARLQRSGSCFPSLS 149

[Close]

BLAST of Carg12949 vs. ExPASy TrEMBL
Match: A0A6J1J9D7 (uncharacterized protein LOC111484741 OS=Cucurbita maxima OX=3661 GN=LOC111484741 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 1.0e-75
Identity = 146/153 (95.42%), Postives = 148/153 (96.73%), Query Frame = 0


Query: 1   MLLAMTLPNSDSQAAAAVECTAEVKCVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCI 60
           MLLAM LPNSDSQAAAA ECT EVKCVKCYSCGF+EDCTPAYISRVRDRFHGRWICGLCI
Sbjct: 1   MLLAMALPNSDSQAAAA-ECTVEVKCVKCYSCGFSEDCTPAYISRVRDRFHGRWICGLCI 60

Query: 61  EAVKDEVVRSGTLISTEEALSRHASFCREFRSTNPLDETEHPISAMGRLLRRRLDSPRVL 120
           EAVKDEVVRSGTLISTEEAL RHASFCREFRSTNPLDETE+PISAMGRLLRRRLDSPRVL
Sbjct: 61  EAVKDEVVRSGTLISTEEALIRHASFCREFRSTNPLDETEYPISAMGRLLRRRLDSPRVL 120

Query: 121 RSNSSRVIKLKPIVDIGGPARLQRSGSCFPSLS 154
           RSNSSRVIKLKPIVDIGG ARLQRSGSCFPSLS
Sbjct: 121 RSNSSRVIKLKPIVDIGGSARLQRSGSCFPSLS 152

[Close]

BLAST of Carg12949 vs. ExPASy TrEMBL
Match: A0A6J1EGW6 (uncharacterized protein LOC111433987 OS=Cucurbita moschata OX=3662 GN=LOC111433987 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 3.9e-70
Identity = 137/153 (89.54%), Postives = 145/153 (94.77%), Query Frame = 0


Query: 1   MLLAMTLPNSDSQAAAAVECTAEVKCVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCI 60
           MLLAM LPNS+SQAAAAV  TAEV+CVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCI
Sbjct: 1   MLLAMALPNSNSQAAAAV-VTAEVECVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCI 60

Query: 61  EAVKDEVVRSGTLISTEEALSRHASFCREFRSTNPLDETEHPISAMGRLLRRRLDSPRVL 120
           EAVKDEVVRSGTLISTEEAL++HASFCREFRS+NPLDETEHPISAMGR+LRR LDSPRVL
Sbjct: 61  EAVKDEVVRSGTLISTEEALAQHASFCREFRSSNPLDETEHPISAMGRVLRRSLDSPRVL 120

Query: 121 RSNSSRVIKLKPIVDIGGPARLQRSGSCFPSLS 154
           RSNSS +IKL+PIV IG  ARLQRSGSCFPSLS
Sbjct: 121 RSNSSGIIKLEPIVVIGDSARLQRSGSCFPSLS 152

[Close]

BLAST of Carg12949 vs. ExPASy TrEMBL
Match: A0A5A7UNA4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G001490 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 2.1e-68
Identity = 133/153 (86.93%), Postives = 140/153 (91.50%), Query Frame = 0


Query: 1   MLLAMTLPNSDSQAAAAVECTAEVKCVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCI 60
           MLLAM LPN+DSQ  A    TAEV+CVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLC+
Sbjct: 1   MLLAMDLPNTDSQTVA---ITAEVECVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCM 60

Query: 61  EAVKDEVVRSGTLISTEEALSRHASFCREFRSTNPLDETEHPISAMGRLLRRRLDSPRVL 120
           EAVKDEVVRSG LIST+EAL RHASFC+EFRSTNP+DETEHPISAMGRLLRR LDSPRVL
Sbjct: 61  EAVKDEVVRSGKLISTKEALIRHASFCKEFRSTNPMDETEHPISAMGRLLRRSLDSPRVL 120

Query: 121 RSNSSRVIKLKPIVDIGGPARLQRSGSCFPSLS 154
           RSNSS VIKL+PIVDIG  ARLQRSGSCFPSLS
Sbjct: 121 RSNSSNVIKLEPIVDIGDSARLQRSGSCFPSLS 150

[Close]

BLAST of Carg12949 vs. ExPASy TrEMBL
Match: A0A1S3BRF7 (uncharacterized protein LOC103492377 OS=Cucumis melo OX=3656 GN=LOC103492377 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 2.1e-68
Identity = 133/153 (86.93%), Postives = 140/153 (91.50%), Query Frame = 0


Query: 1   MLLAMTLPNSDSQAAAAVECTAEVKCVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCI 60
           MLLAM LPN+DSQ  A    TAEV+CVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLC+
Sbjct: 1   MLLAMDLPNTDSQTVA---ITAEVECVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCM 60

Query: 61  EAVKDEVVRSGTLISTEEALSRHASFCREFRSTNPLDETEHPISAMGRLLRRRLDSPRVL 120
           EAVKDEVVRSG LIST+EAL RHASFC+EFRSTNP+DETEHPISAMGRLLRR LDSPRVL
Sbjct: 61  EAVKDEVVRSGKLISTKEALIRHASFCKEFRSTNPMDETEHPISAMGRLLRRSLDSPRVL 120

Query: 121 RSNSSRVIKLKPIVDIGGPARLQRSGSCFPSLS 154
           RSNSS VIKL+PIVDIG  ARLQRSGSCFPSLS
Sbjct: 121 RSNSSNVIKLEPIVDIGDSARLQRSGSCFPSLS 150

[Close]

BLAST of Carg12949 vs. TAIR 10
Match: AT5G20670.1 (Protein of unknown function (DUF1677) )

HSP 1 Score: 148.3 bits (373), Expect = 6.2e-36
Identity = 77/131 (58.78%), Postives = 91/131 (69.47%), Query Frame = 0


Query: 24  VKCVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCIEAVKDEVVRSGTLISTEEALSRH 83
           V+ V C +CGF E+CTPAYI+RV++R  G W+CGLC EAVKDEVVRS T IS EEAL RH
Sbjct: 23  VESVTCDTCGFAEECTPAYINRVKERHKGHWLCGLCAEAVKDEVVRSSTRISVEEALRRH 82

Query: 84  ASFCREFRSTNPLDETEHPISAMGRLLRRRLD-SPRVLRSNSSRVIKLKPIVDIGGPARL 143
            +FC  FRS +P DE E PIS +GR+LRR LD SPR   + +S    L  I  +     L
Sbjct: 83  TTFCHRFRSWSP-DEEEDPISVIGRILRRSLDGSPRRTNTRTSSSGALPGIDGVESRRSL 142

Query: 144 QRSGSCFPSLS 154
            RSGSCFPSLS
Sbjct: 143 LRSGSCFPSLS 152

[Close]

BLAST of Carg12949 vs. TAIR 10
Match: AT1G72510.1 (Protein of unknown function (DUF1677) )

HSP 1 Score: 119.0 bits (297), Expect = 4.0e-27
Identity = 66/134 (49.25%), Postives = 88/134 (65.67%), Query Frame = 0


Query: 23  EVKCVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCIEAVKDEVVRSGTLISTEEALSR 82
           E   V C  CG TE+CT +YI  VR+R+ G+WICGLC EAVK EV+R+  L++TEEA++R
Sbjct: 33  EPDSVTCDCCGLTEECTQSYIEMVRERYMGKWICGLCSEAVKYEVMRTKRLLTTEEAMAR 92

Query: 83  HASFCREFRSTN-PLDETEHPISAMGRLLRRRLDSPRVLRS--NSSRVIKLKPIVDIGGP 142
           H + C +F+S++ P + T H ISAM ++LR+ LDSPR+LRS  NS          D    
Sbjct: 93  HMNMCNKFKSSSPPPNPTGHLISAMRQILRKSLDSPRMLRSMPNSPSKDDQDHHHDCVSN 152

Query: 143 ARLQRSGSCFPSLS 154
             L RS SCF SL+
Sbjct: 153 V-LSRSDSCFASLT 165

[Close]

BLAST of Carg12949 vs. TAIR 10
Match: AT1G72510.2 (Protein of unknown function (DUF1677) )

HSP 1 Score: 119.0 bits (297), Expect = 4.0e-27
Identity = 66/134 (49.25%), Postives = 88/134 (65.67%), Query Frame = 0


Query: 23  EVKCVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCIEAVKDEVVRSGTLISTEEALSR 82
           E   V C  CG TE+CT +YI  VR+R+ G+WICGLC EAVK EV+R+  L++TEEA++R
Sbjct: 33  EPDSVTCDCCGLTEECTQSYIEMVRERYMGKWICGLCSEAVKYEVMRTKRLLTTEEAMAR 92

Query: 83  HASFCREFRSTN-PLDETEHPISAMGRLLRRRLDSPRVLRS--NSSRVIKLKPIVDIGGP 142
           H + C +F+S++ P + T H ISAM ++LR+ LDSPR+LRS  NS          D    
Sbjct: 93  HMNMCNKFKSSSPPPNPTGHLISAMRQILRKSLDSPRMLRSMPNSPSKDDQDHHHDCVSN 152

Query: 143 ARLQRSGSCFPSLS 154
             L RS SCF SL+
Sbjct: 153 V-LSRSDSCFASLT 165

[Close]

BLAST of Carg12949 vs. TAIR 10
Match: AT2G09970.1 (Protein of unknown function (DUF1677) )

HSP 1 Score: 102.8 bits (255), Expect = 3.0e-22
Identity = 59/135 (43.70%), Postives = 84/135 (62.22%), Query Frame = 0


Query: 23  EVKCVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCIEAVKDEVVRSGTLIST-EEALS 82
           E+  V C  CG T++CT +Y   +R+R+ G+WI G C EAVK +V+R+   ++T EEA++
Sbjct: 33  ELDSVTCDCCGLTDECTESYTEMIRERYIGKWISGFCSEAVKYKVMRTKRFLTTEEEAMA 92

Query: 83  RHASFCREFRSTNPLDE-TEHPISAMGRLLRRRLDSPRVLRS--NSSRVIKLKPIVDIGG 142
           RH + C +F+S++P    T H ISAM ++LR+ LDSPR+LRS  NS          D   
Sbjct: 93  RHMNKCNKFKSSSPPSNLTRHLISAMRQILRKSLDSPRMLRSMPNSPSKDDQDNHHDCVS 152

Query: 143 PARLQRSGSCFPSLS 154
              L RS SCF SL+
Sbjct: 153 NV-LSRSDSCFASLT 166

[Close]

BLAST of Carg12949 vs. TAIR 10
Match: AT3G22540.1 (Protein of unknown function (DUF1677) )

HSP 1 Score: 87.8 bits (216), Expect = 9.9e-18
Identity = 44/104 (42.31%), Postives = 63/104 (60.58%), Query Frame = 0


Query: 23  EVKCVKCYSCGFTEDCTPAYISRVRDRFHGRWICGLCIEAVKDEVVRSGTLISTEEALSR 82
           E++ V+C  CG  EDCT  YIS V+  F  +W+CGLC EAV+DEV R   + + +EA+  
Sbjct: 2   EIESVRCECCGLMEDCTQDYISEVKSNFDNKWLCGLCSEAVRDEVSRR-KMTTVDEAVKA 61

Query: 83  HASFCREFRSTNPLDETEHPISAMGRLLRRRLDSPRVLRSNSSR 127
           H SFC +F+  NP     H    M ++LRRR  S  +  S++S+
Sbjct: 62  HVSFCGKFKKDNP---AVHVADGMRQMLRRR--SGELTNSSTSK 99

The following BLAST results are available for this feature:

BLAST of Carg12949 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7023708.1	7.4e-100	100.00	hypothetical protein SDJN02_14734, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023516156.1	8.5e-80	98.69	uncharacterized protein LOC111780103 [Cucurbita pepo subsp. pepo]	[more]
KAG6590044.1	1.5e-79	98.69	hypothetical protein SDJN03_15467, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022960603.1	1.2e-78	99.33	uncharacterized protein LOC111461338 [Cucurbita moschata]	[more]
XP_022987087.1	2.2e-75	95.42	uncharacterized protein LOC111484741 [Cucurbita maxima]	[more]

BLAST of Carg12949 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg12949 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H9F8	5.9e-79	99.33	uncharacterized protein LOC111461338 OS=Cucurbita moschata OX=3662 GN=LOC1114613...	[more]
A0A6J1J9D7	1.0e-75	95.42	uncharacterized protein LOC111484741 OS=Cucurbita maxima OX=3661 GN=LOC111484741...	[more]
A0A6J1EGW6	3.9e-70	89.54	uncharacterized protein LOC111433987 OS=Cucurbita moschata OX=3662 GN=LOC1114339...	[more]
A0A5A7UNA4	2.1e-68	86.93	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BRF7	2.1e-68	86.93	uncharacterized protein LOC103492377 OS=Cucumis melo OX=3656 GN=LOC103492377 PE=...	[more]

BLAST of Carg12949 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20670.1	6.2e-36	58.78	Protein of unknown function (DUF1677)	[more]
AT1G72510.1	4.0e-27	49.25	Protein of unknown function (DUF1677)	[more]
AT1G72510.2	4.0e-27	49.25	Protein of unknown function (DUF1677)	[more]
AT2G09970.1	3.0e-22	43.70	Protein of unknown function (DUF1677)	[more]
AT3G22540.1	9.9e-18	42.31	Protein of unknown function (DUF1677)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012876	Protein of unknown function DUF1677, plant	PFAM	PF07911	DUF1677	coord: 24..112 e-value: 1.8E-35 score: 121.2
IPR012876	Protein of unknown function DUF1677, plant	PANTHER	PTHR33108	OS01G0745000 PROTEIN	coord: 10..153
None	No IPR available	PANTHER	PTHR33108:SF3	DUF1677 FAMILY PROTEIN	coord: 10..153

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12949-RA	Carg12949-RA	mRNA