Carg12920 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg12920
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionTATA-box-binding protein
LocationCarg_Chr10: 3777454 .. 3783874 (+)
RNA-Seq ExpressionCarg12920
SyntenyCarg12920
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCGCATAAACGCATTCCCTCTCCTCTCGTTCTCTTCTTTGGAAACCAAAACTCAAAACTCTCTCCATTTATAAAGCTTTCTCCATCGTCTCTCTCACATACCCAGATATAAAACACCACGCCTTTCAAACTCTTCCCGCTTCCTCTATCAATTCGCAATTTTCCCACTAAATTTCTGGTCCGATCGACTGGAAATTCTTTGCTCAATTTAGGGTTTCCCATTTGCAAGAGGTCTGGTTTTTGTTTTTTTTTTATTCTTGTTAATTTGTTTGGTTGGTCTTGTGATCAACAGATCGGGTGTGTTGATGGGTTAGCTTTTGGGTTTTGATTTAGCTTTTTGTTGGGTTTGTGTCTTGCCTTCCTCAGCTGGCACCTAGGGCATGTTTTTCTTAGATTTGCTTGCGAGAGGATGGGTTTGTGTATACCCCCTTTATGATTGATCAGAATGGAGTGGTTTTCTATGATCCCCGTATTTCGTTTGACTTTGTTCATCAATTTGATAAGTGGGTCCGTGATTTCTGTACATGATGTATGAATTACTATTTTCAGTTCATTAATGGGCATGGAGTCTTGGTTTTATTTATAATTCATGGGTATCTTGTCCTGATTTTGGGCTTGGGGCATTGAAGAAGTGTGAATAATTATTTTGGAGCAAGAATTTAAAGAGTAGAGTTTCGTTGTGCAGAGATTTCTTATAAGGAATGGCAGATCAAGGCTTGGAAGGAGCCCAACCCGTTGATCTTAAAAAGCATCCTTCTGGGATTGTACCTACTCTTCAGTGAGTTCTAACTTTTCCAACCACTTGTGCCTTCTGATTTTGTATGATAGCTCTTTTTTGTAGGCCAAATTAAAGCGCTTCATTAGTATTAAGTGTTGGGTTTTTTCCTTTTTGCAATTTACTACGATAACTTGGTATCATGGACGAGTTTAGTGATTTACATCCGGAAATTGGGTTACTCCGGAAAAGAGAATAGTTTAACTTTTCGTCTAAGCTACAAATGAGCCTTTAATTTTTACGTAGGTGTGGTTTTTTCAACTCTCGAGCTTTGAAATAATCAATATTGAATGGGACGAAAATACACCCAATCTCCTTCTCCCCCATGTCTCTCTCTTTCTCTTGCGTGCACACACACACAGGGAACACAGCTGTAGATTTGGTAATAAGAGAGTTGAATCGAAGTTCTAAGGATCAGTTACATCCACCAAAAATTTATTGAGACTCGGGAACATCAAAATTTCGTCTACACATTAACAGAGAAAGTCAATTCTGATATATATATAGACTGACAGCTAAGAATTTGTCAAGATTTTATGGTCTAACCTGGTCTTTGCATGGTCTTCGTCATCTTGCATAGAATAATTCGGATAAGCTTCTCCTTTCCTGACAAAAAATTCATATATAACTGTAAGATGTGATGACTGATAACCAAGTAAGAGCATTATTCTTGCTGAATAAATTATTTTGGTAAAGACTCGTGTAAGCTAGGGAGCGTGAACATTTTGGTTTGGGCAATGCGTCCCTGTTAGACATTCTGACATTTGTGCACTTGTTAATCATAGTTGAAATATGTCACGTATCAGTTTAAAGTTATAAACATGCTCGGTACAATTTGAACAGTTTGAGAGTGAAATACATTGTAAATGCTTTGCATATGCATTATTAACTTTAAATTTGTTTTCATTTTCTTTATTAATATGTAAAATCATTTAGTTGATTGATAAGTTGGATTGGATAACAGTTTTACATAAAGTATTGTTATTGTATCATAAATATGTGTGTATTGTGTATGCAGATTCTCACTTTTTTCCTTAAAAACCTTGAGATTTATTCTCAATGTGCAAAACGTTTTAAAAATTGGAAATATTTTGAAGGACTATTGCTCGAGTTTCATTCCCTTCTCAGCCATCCTTTCTAGTTTCGACCTGAAACTTCCACCAAATAGAAATCAGTTTTAAAATGAAACTTAAACTGAAGTAGACAACCTCTTGAAGAAGATTTTAACAGAAACAACTCTGGGTTCTTTATTTGCTGGTTCATACTGCCTTTTGCGAAGTAAGATGTAGGCATCAATGTCTATTTGTTTTGGCTTTACATGTTTAGGAACTCCAGGTATGTATATATAGTTTATTTTCTTAATGCACGTATATTGTATTATACTGTTTCTAGGAACATTGTGTCAACAGTCAATCTGGACTGCAAGTTGGATCTGAAGGCCATTGCTCTGCAAGCTCGCAATGCTGAATACAATCCCAAGGCAAGTGATGTTTATTCTAAGCCTATGCAGACTTCGTAAACGAAAAAAAATATACCATCGCAGATATTTTCGCAATTCAACATGGACATCAAGAATCCCATTTTCAGGGTGGAGCTTTGTTGTTCCTTCTTACATTTGAATCTGAATTTTTAAGATTTTCAATTGTTGTTTCTATGAAACAGCGTTTTGCTGCTGTTATCATGAGAATAAGGGAGCCAAAAACCACAGCACTGATATTTGCCTCTGGAAAGATGGTAAGTTATTGTCTATCTAATTTACAAACAGCGGGAGCTTGGCTGCCATATTCCAGTAGCTTCCAGTGATTTACTTTATTTCTATGTTTGTCATGAAGAAACGTTTGACCTTGTTTGTGTCTGACACACAAAAATGGTATCCTATTTTCTTATTTTATATATATATATATATATATATATATATATATATATATATATATAAAATAGCCATGTTGGGTCACATCCGAAAGACAAGTTGACCTGATAAAAAGTCGACGAGAAAATGAAAAGGAAAAAAAATTAACATGACTCATGTACAACCCATTACTTGTCTTATTAAGAATAATTGTAAAAACCCATCGGAAAGAAATCATAGGGGGAGACCCATATCATGATCAATATTTTATTACATAATATAATAGTAACCTCAAACCCACATACTATTAAGGCATTATGACCTTGATCAAAAGGTCAAAAATTCGAACCTCAACCCGACTCAAAAAAAAAAAATCCCCAAACCAATATTTATAATTTATCCTGTCGATATTCTTTGCGTGAATCCCTATTAAACAGGTTCATTGTTCAAATAATTTGTTTTGAAACTTGATGAAATTTGTTTGAATTGAATTTAGGTTGAGTGAGAGTTCTCGTGTGCTTAAAGTGCCAGTATAGTTATAAGGATGAATGTTTTTTCTTGTAAATTGGCTGTTGCATTTGAAGAGTATCTTGTTTTAGCTATTTGGATGTATGATGTGGTGTAGGTCTGTACTGGAGCCAAGAGCGAACAACAATCAAAATTAGCTGCAAGAAAGGTACTTAATTTCTTTCCAGTATTCTTAGTGTGTAGAGGTTGTGAAATCACCTCTCTACTCATTGGCTGTCGGGATATCGATGATAGAATCACACAGCTTGAGAAGGTCTACTCGATTTTTATCTTAAAACATCATCATCATCATTTGGTTCATTAATTTTTCAAAGGTCTGACTAGTTGTTTAACATCACTCATCAGTCCCCCTCCCCTGATTCAGTGATTTAAATTGAATTTTGAAGTTTAAATCTCACAGATTTCATTTTATAAGTATTCCAGAAATAATGTATCTAATTTAGGAAATATTTTCACCGAAAACCTTAAAACATGGGCAAAAAATTAGAGATATGTGCTGAGATATATCTTATTAGTCAGTTGTTAGGTTTTAGGTGTGGAGAATAGTTGATAGTTATAAGTAATTTTTAGTTTACATCTTATTGTAACAAGAAATATGTGTGAATATTTACATATTTAGGCGTTGATATGTTATCTGAGATTAAATCATCATAGGGAACCACTAATCACGATCAGTTGATGTTCAGTTTATTGATTAAAATCTTTCCATCTCATTAAACAACGCCCGTCTATTTAATATGAAGCTATTCTTTATCTGATATTGGACCTTGTTTCCTCTTTCCAGTATGCCCGTATAATCCAAAAACTTGGATTTCCTGCCAAGTTCAAGGTAACGTGCTTCTCTTCCCCTCATGTGTAGGGTCCTTCAGATCTTTTTTTTTTTTATATATTTTTTTTTTTTAACAAATAGAAAGTATCTTTCAGTAAGAACGAAAGAAGACAAAAGAGAGGAAAAATAAGATATACACAATTTAGAGAGGGAAACTAAAATTATGTAGCACATTTTCATACAAATTCTTCATCTGACCAATTTTTTTGCGTGCATGGAATTGCAAATGCCGTCAGGCAGACTCTTAGATCCATGATCTCATTCGCGTTCAAATTGAACAAGGAATTAGCTTTACCTCATGATGCTTTTAGCTGATGGCCTTTTCTATTGCTTTTCTCATTTATTTAGTGTTTGTTCTTGCTGTAATATATGCTTGTGCTTTTTTAATCTGGTGCAGGATTTTAAGATTCAGAATATTGTTGGCTCATGTGATGTTAAGTTCCCCATAAGACTCGAGGGTCTTGCATATTCACACGGTGCCTTTTCAAGTGTAAGCTTTAGATCTTTATCTTTGTCAGATTCCTAAGGTCCACAGTTTGCAGGCATTTTTCTGCTAGAAATCTTTACCTCTTCTGATATATTCTTTTGGGGGCATGACCTGAATGTATGTATATTTTTGTGCTTGACTATGGTTTGTCCAATATTTTGAGTGATTCTTTGATATGGACTTTTGTGGGGAACTAGTCCATTAATGATTTTTCATGTGTCTACAATGTTGAAATTTTAATATATGTTTTATATCTCAGGTTAACCATTATATTTTGATGTCGAACTTCTTGGATATGTGAGATGTAACTTCGTTATTAAAACTTCGCCCTCCGTTTCTTTTCAGTACGAACCAGAGCTATTTCCTGGATTGATTTATCGGATGAAACAACCGAAGATTGTGCTTCTCATTTTCGTTTCTGGAAAAATAGTTCTCACTGGGGCTAAGGTAAAAATTCAACTGCCGTTTCCCGTTCTTGTTAAAATCAGTGTTGTATTCTTTTTTTTTTTTTTTTTAATTTAATTTTATAACAAAGAACCAAGTTCCATTGTTTCCCCCCCTCAAAGACTCCACAAAATAGCTCAAGCCCCATCTTACGGAGAAACTCTTCGATCGGCCCCTGTTATCTTATATTCGTATTTTCTAGTCTGAACACTAAATTCAGCAAAAATGTACTTCCAAATAGATTGAAGCTTACCAATAATTGAATTCTTGGTAAGATGATAAAAAATCGTCGATTGTATAGAAATTTATGTTAACGTAGATGTCAGAAATACTATTAGATTACAGAGGATATATTAGTAATCAGCTAACGAGTTTGTTAGCCGGAGATGGTCATGAATAGAGGAGTAATGGAGGGTGAACACGTGATGGTTTAGTTATTTGAGTTTCGGGCGTGAGTTATTCAGTAGGGAGGTCTCCGAGTTCCTTGACTCGGATATGTTACTGGTCCTCTGATTTCAATAAAGTGCTTTATTATATGTTTCAATTATCAAAGATTCAATTAGCAGTCAAAATGATTTTAGTATGACTTATGGTCACTTTTGACCAATCTTGAGACAAGGATTAGATGAACAGCATAGCATTACCCTCTGTGGATAGTGACTGTCACTCGACCAGTCATATCTTTGATCTGTGAATATCTGTATTTTGATTCCTTCAGGTGAGAGAGGAGACATACACAGCATTTGAGAACATATACCCAGTGCTTACAGAGTTCAGGAAAAACCAGCAATGGTAAGATGCTTATTATTGGATCTGAGCCTGAATAAACAAGCAAGCTTCTTGCTCGTCATTTCGTCTTTACGAACATATGTTTGCAACTTTTCTGGTTGTCATTTCGTCTTACCGAACATCTACTTGCAGATTCTTGGCTTCGGACTAGCCATCCGGGAAGTCAATTTTCCTTCATGCTTAGAGAACAAACGGACTGGCACACAGACAGAAGCTAGCTAGCCGGAAAAAAAAGTGTATTTATGGTGAGATTGCTTCCTGTTTGAGGATATGGAAGAAGACCTTTGGTTTTTGGCATAAAATGGAAGGGTCTAGTGATGAGCATTACATGCATGTCTTTTCTTTTAGTGTCCTGTTCATCTTGTGTGATAAAATGTGGAGGGAAGTTGTTGAACTTTCTCTTTTTTTCTTCATTTTTTTTTTCCCTTAAAGTTTTGATATTGTGTGATCAAAGTGGGGGATTGTGTATAGAAGAATGTTTTTCTCCATTAACTCACACCAGACAATTATGCAATTTATAATATGTGCTTTACACAAGGTCATGTAAACTGTAAACTAGTTCTACTTCATAAATTATAAATTATAAGAAATTATTAGAAACGATTCGAGATGGGGAGGGTTGTCCTCGTCCATTGTAACGAAGATTAGTTTGTTTATAATTGTTGATGTCGTGTGCCTAGCCCACACTAGCACATCGAGCATCCGACTCTATTGGATCAA

mRNA sequence

ATCGCATAAACGCATTCCCTCTCCTCTCGTTCTCTTCTTTGGAAACCAAAACTCAAAACTCTCTCCATTTATAAAGCTTTCTCCATCGTCTCTCTCACATACCCAGATATAAAACACCACGCCTTTCAAACTCTTCCCGCTTCCTCTATCAATTCGCAATTTTCCCACTAAATTTCTGGTCCGATCGACTGGAAATTCTTTGCTCAATTTAGGGTTTCCCATTTGCAAGAGAGATTTCTTATAAGGAATGGCAGATCAAGGCTTGGAAGGAGCCCAACCCGTTGATCTTAAAAAGCATCCTTCTGGGATTGTACCTACTCTTCAGAACATTGTGTCAACAGTCAATCTGGACTGCAAGTTGGATCTGAAGGCCATTGCTCTGCAAGCTCGCAATGCTGAATACAATCCCAAGCGTTTTGCTGCTGTTATCATGAGAATAAGGGAGCCAAAAACCACAGCACTGATATTTGCCTCTGGAAAGATGGTCTGTACTGGAGCCAAGAGCGAACAACAATCAAAATTAGCTGCAAGAAAGTATGCCCGTATAATCCAAAAACTTGGATTTCCTGCCAAGTTCAAGGATTTTAAGATTCAGAATATTGTTGGCTCATGTGATGTTAAGTTCCCCATAAGACTCGAGGGTCTTGCATATTCACACGGTGCCTTTTCAAGTTACGAACCAGAGCTATTTCCTGGATTGATTTATCGGATGAAACAACCGAAGATTGTGCTTCTCATTTTCGTTTCTGGAAAAATAGTTCTCACTGGGGCTAAGGTGAGAGAGGAGACATACACAGCATTTGAGAACATATACCCAGTGCTTACAGAGTTCAGGAAAAACCAGCAATGATTCTTGGCTTCGGACTAGCCATCCGGGAAGTCAATTTTCCTTCATGCTTAGAGAACAAACGGACTGGCACACAGACAGAAGCTAGCTAGCCGGAAAAAAAAGTGTATTTATGGTGAGATTGCTTCCTGTTTGAGGATATGGAAGAAGACCTTTGGTTTTTGGCATAAAATGGAAGGGTCTAGTGATGAGCATTACATGCATGTCTTTTCTTTTAGTGTCCTGTTCATCTTGTGTGATAAAATGTGGAGGGAAGTTGTTGAACTTTCTCTTTTTTTCTTCATTTTTTTTTTCCCTTAAAGTTTTGATATTGTGTGATCAAAGTGGGGGATTGTGTATAGAAGAATGTTTTTCTCCATTAACTCACACCAGACAATTATGCAATTTATAATATGTGCTTTACACAAGGTCATGTAAACTGTAAACTAGTTCTACTTCATAAATTATAAATTATAAGAAATTATTAGAAACGATTCGAGATGGGGAGGGTTGTCCTCGTCCATTGTAACGAAGATTAGTTTGTTTATAATTGTTGATGTCGTGTGCCTAGCCCACACTAGCACATCGAGCATCCGACTCTATTGGATCAA

Coding sequence (CDS)

ATGGCAGATCAAGGCTTGGAAGGAGCCCAACCCGTTGATCTTAAAAAGCATCCTTCTGGGATTGTACCTACTCTTCAGAACATTGTGTCAACAGTCAATCTGGACTGCAAGTTGGATCTGAAGGCCATTGCTCTGCAAGCTCGCAATGCTGAATACAATCCCAAGCGTTTTGCTGCTGTTATCATGAGAATAAGGGAGCCAAAAACCACAGCACTGATATTTGCCTCTGGAAAGATGGTCTGTACTGGAGCCAAGAGCGAACAACAATCAAAATTAGCTGCAAGAAAGTATGCCCGTATAATCCAAAAACTTGGATTTCCTGCCAAGTTCAAGGATTTTAAGATTCAGAATATTGTTGGCTCATGTGATGTTAAGTTCCCCATAAGACTCGAGGGTCTTGCATATTCACACGGTGCCTTTTCAAGTTACGAACCAGAGCTATTTCCTGGATTGATTTATCGGATGAAACAACCGAAGATTGTGCTTCTCATTTTCGTTTCTGGAAAAATAGTTCTCACTGGGGCTAAGGTGAGAGAGGAGACATACACAGCATTTGAGAACATATACCCAGTGCTTACAGAGTTCAGGAAAAACCAGCAATGA

Protein sequence

MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLTEFRKNQQ
Homology
[Close]
BLAST of Carg12920 vs. NCBI nr
Match: KAG6588117.1 (TATA-box-binding protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 395.2 bits (1014), Expect = 3.4e-106
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0 

Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60
           MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
Sbjct: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120
           IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180

Query: 181 TYTAFENIYPVLTEFRKNQQ 201
           TYTAFENIYPVLTEFRKNQQ
Sbjct: 181 TYTAFENIYPVLTEFRKNQQ 200

[Close]
BLAST of Carg12920 vs. NCBI nr
Match: XP_004144066.1 (TATA-box-binding protein [Cucumis sativus] >XP_008450995.1 PREDICTED: TATA-box-binding protein [Cucumis melo] >XP_022147635.1 TATA-box-binding protein [Momordica charantia] >XP_022933932.1 TATA-box-binding protein [Cucurbita moschata] >XP_022961121.1 TATA-box-binding protein [Cucurbita moschata] >XP_022968327.1 TATA-box-binding protein [Cucurbita maxima] >XP_022987321.1 TATA-box-binding protein [Cucurbita maxima] >XP_023515908.1 TATA-box-binding protein [Cucurbita pepo subsp. pepo] >XP_023531923.1 TATA-box-binding protein [Cucurbita pepo subsp. pepo] >XP_038879585.1 TATA-box-binding protein [Benincasa hispida] >XP_038879586.1 TATA-box-binding protein [Benincasa hispida] >KAG7023737.1 TATA-box-binding protein [Cucurbita argyrosperma subsp. argyrosperma] >KGN66345.1 hypothetical protein Csa_006854 [Cucumis sativus])

HSP 1 Score: 395.2 bits (1014), Expect = 3.4e-106
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0 

Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60
           MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
Sbjct: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120
           IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180

Query: 181 TYTAFENIYPVLTEFRKNQQ 201
           TYTAFENIYPVLTEFRKNQQ
Sbjct: 181 TYTAFENIYPVLTEFRKNQQ 200

[Close]
BLAST of Carg12920 vs. NCBI nr
Match: KAG6590070.1 (TATA-box-binding protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 395.2 bits (1014), Expect = 3.4e-106
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0 

Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60
           MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
Sbjct: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120
           IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180

Query: 181 TYTAFENIYPVLTEFRKNQQ 201
           TYTAFENIYPVLTEFRKNQQ
Sbjct: 181 TYTAFENIYPVLTEFRKNQQ 200

[Close]
BLAST of Carg12920 vs. NCBI nr
Match: XP_023927294.1 (TATA-box-binding protein [Quercus suber])

HSP 1 Score: 391.3 bits (1004), Expect = 4.8e-105
Identity = 197/200 (98.50%), Postives = 200/200 (100.00%), Query Frame = 0 

Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60
           MA+QGLEG+QPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
Sbjct: 1   MAEQGLEGSQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120
           IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVR+E
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDE 180

Query: 181 TYTAFENIYPVLTEFRKNQQ 201
           TYTAFENIYPVLTEFRKNQQ
Sbjct: 181 TYTAFENIYPVLTEFRKNQQ 200

[Close]
BLAST of Carg12920 vs. NCBI nr
Match: KAF3958623.1 (hypothetical protein CMV_016483 [Castanea mollissima])

HSP 1 Score: 390.2 bits (1001), Expect = 1.1e-104
Identity = 196/200 (98.00%), Postives = 200/200 (100.00%), Query Frame = 0 

Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60
           MA+QGLEG+QPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLK+IALQARNAEYNPKRFAAV
Sbjct: 1   MAEQGLEGSQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKSIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120
           IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVR+E
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDE 180

Query: 181 TYTAFENIYPVLTEFRKNQQ 201
           TYTAFENIYPVLTEFRKNQQ
Sbjct: 181 TYTAFENIYPVLTEFRKNQQ 200

[Close]
BLAST of Carg12920 vs. ExPASy Swiss-Prot
Match: P26357 (TATA-box-binding protein OS=Solanum tuberosum OX=4113 GN=TBP PE=2 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 4.1e-107
Identity = 195/200 (97.50%), Postives = 199/200 (99.50%), Query Frame = 0 

Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60
           MADQGLEG+QPVDL KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
Sbjct: 1   MADQGLEGSQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120
           IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAY+HGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV+TGAKVR+E
Sbjct: 121 SCDVKFPIRLEGLAYAHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDE 180

Query: 181 TYTAFENIYPVLTEFRKNQQ 201
           TYTAFENIYPVLTEFRKNQQ
Sbjct: 181 TYTAFENIYPVLTEFRKNQQ 200

[Close]
BLAST of Carg12920 vs. ExPASy Swiss-Prot
Match: Q42808 (TATA-box-binding protein OS=Glycine max OX=3847 GN=TBP1 PE=2 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 4.1e-107
Identity = 195/200 (97.50%), Postives = 199/200 (99.50%), Query Frame = 0 

Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60
           MADQGLEG+QPVDL+KHPSGIVPTLQNIVSTVNLDCKLDLK IALQARNAEYNPKRFAAV
Sbjct: 1   MADQGLEGSQPVDLQKHPSGIVPTLQNIVSTVNLDCKLDLKTIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120
           IMRIR+PKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
Sbjct: 61  IMRIRDPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVR+E
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDE 180

Query: 181 TYTAFENIYPVLTEFRKNQQ 201
           TYTAFENIYPVLTEFRKNQQ
Sbjct: 181 TYTAFENIYPVLTEFRKNQQ 200

[Close]
BLAST of Carg12920 vs. ExPASy Swiss-Prot
Match: P48511 (TATA-box-binding protein OS=Mesembryanthemum crystallinum OX=3544 PE=2 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 1.6e-106
Identity = 196/200 (98.00%), Postives = 198/200 (99.00%), Query Frame = 0 

Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60
           MA+QGLEG+QPVD  KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
Sbjct: 1   MAEQGLEGSQPVDPIKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120
           IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180

Query: 181 TYTAFENIYPVLTEFRKNQQ 201
           TYTAFENIYPVLTEFRKNQQ
Sbjct: 181 TYTAFENIYPVLTEFRKNQQ 200

[Close]
BLAST of Carg12920 vs. ExPASy Swiss-Prot
Match: P50159 (TATA-box-binding protein 2 OS=Zea mays OX=4577 GN=TBP2 PE=2 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 1.7e-105
Identity = 194/200 (97.00%), Postives = 197/200 (98.50%), Query Frame = 0 

Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60
           MA+ GLEG+QPVDL KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
Sbjct: 1   MAEPGLEGSQPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120
           IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180

Query: 181 TYTAFENIYPVLTEFRKNQQ 201
           TYTAFENIYPVL+EFRK QQ
Sbjct: 181 TYTAFENIYPVLSEFRKIQQ 200

[Close]
BLAST of Carg12920 vs. ExPASy Swiss-Prot
Match: P93348 (TATA-box-binding protein OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 1.1e-104
Identity = 193/200 (96.50%), Postives = 195/200 (97.50%), Query Frame = 0 

Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60
           MA+ GLEG QPVDL KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
Sbjct: 1   MAEVGLEGNQPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120
           IMRIREPKTTALIFASGKMVCTGAKSEQ SKLAARKYARIIQKLGF AKFKDFKIQNIVG
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEQSSKLAARKYARIIQKLGFDAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVR+E
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDE 180

Query: 181 TYTAFENIYPVLTEFRKNQQ 201
           TYTAFENIYPVLTEFRKNQQ
Sbjct: 181 TYTAFENIYPVLTEFRKNQQ 200

[Close]
BLAST of Carg12920 vs. ExPASy TrEMBL
Match: A0A6J1JDU6 (TATA-box-binding protein OS=Cucurbita maxima OX=3661 GN=LOC111484910 PE=3 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 1.6e-106
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0 

Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60
           MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
Sbjct: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120
           IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180

Query: 181 TYTAFENIYPVLTEFRKNQQ 201
           TYTAFENIYPVLTEFRKNQQ
Sbjct: 181 TYTAFENIYPVLTEFRKNQQ 200

[Close]
BLAST of Carg12920 vs. ExPASy TrEMBL
Match: A0A6J1H9G6 (TATA-box-binding protein OS=Cucurbita moschata OX=3662 GN=LOC111461727 PE=3 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 1.6e-106
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0 

Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60
           MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
Sbjct: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120
           IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180

Query: 181 TYTAFENIYPVLTEFRKNQQ 201
           TYTAFENIYPVLTEFRKNQQ
Sbjct: 181 TYTAFENIYPVLTEFRKNQQ 200

[Close]
BLAST of Carg12920 vs. ExPASy TrEMBL
Match: A0A0A0LWT4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G599390 PE=3 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 1.6e-106
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0 

Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60
           MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
Sbjct: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120
           IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180

Query: 181 TYTAFENIYPVLTEFRKNQQ 201
           TYTAFENIYPVLTEFRKNQQ
Sbjct: 181 TYTAFENIYPVLTEFRKNQQ 200

[Close]
BLAST of Carg12920 vs. ExPASy TrEMBL
Match: A0A6J1D0P6 (TATA-box-binding protein OS=Momordica charantia OX=3673 GN=LOC111016510 PE=3 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 1.6e-106
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0 

Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60
           MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
Sbjct: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120
           IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180

Query: 181 TYTAFENIYPVLTEFRKNQQ 201
           TYTAFENIYPVLTEFRKNQQ
Sbjct: 181 TYTAFENIYPVLTEFRKNQQ 200

[Close]
BLAST of Carg12920 vs. ExPASy TrEMBL
Match: A0A1S3BPX8 (TATA-box-binding protein OS=Cucumis melo OX=3656 GN=LOC103492411 PE=3 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 1.6e-106
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0 

Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60
           MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
Sbjct: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120
           IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180

Query: 181 TYTAFENIYPVLTEFRKNQQ 201
           TYTAFENIYPVLTEFRKNQQ
Sbjct: 181 TYTAFENIYPVLTEFRKNQQ 200

[Close]
BLAST of Carg12920 vs. TAIR 10
Match: AT1G55520.1 (TATA binding protein 2 )

HSP 1 Score: 372.1 bits (954), Expect = 2.8e-103
Identity = 188/200 (94.00%), Postives = 192/200 (96.00%), Query Frame = 0 

Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60
           MADQG EG+QPVDL KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
Sbjct: 1   MADQGTEGSQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120
           IMRIREPKTTALIFASGKMVCTGAKSE  SKLAARKYARI+QKLGFPAKFKDFKIQNIVG
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEHLSKLAARKYARIVQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSH AFSSYEPELFPGLIYRMK PKIVLLIFVSGKIV+TGAK+REE
Sbjct: 121 SCDVKFPIRLEGLAYSHSAFSSYEPELFPGLIYRMKLPKIVLLIFVSGKIVITGAKMREE 180

Query: 181 TYTAFENIYPVLTEFRKNQQ 201
           TYTAFENIYPVL EFRK QQ
Sbjct: 181 TYTAFENIYPVLREFRKVQQ 200

[Close]
BLAST of Carg12920 vs. TAIR 10
Match: AT1G55520.2 (TATA binding protein 2 )

HSP 1 Score: 372.1 bits (954), Expect = 2.8e-103
Identity = 188/200 (94.00%), Postives = 192/200 (96.00%), Query Frame = 0 

Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60
           MADQG EG+QPVDL KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
Sbjct: 1   MADQGTEGSQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120
           IMRIREPKTTALIFASGKMVCTGAKSE  SKLAARKYARI+QKLGFPAKFKDFKIQNIVG
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEHLSKLAARKYARIVQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSH AFSSYEPELFPGLIYRMK PKIVLLIFVSGKIV+TGAK+REE
Sbjct: 121 SCDVKFPIRLEGLAYSHSAFSSYEPELFPGLIYRMKLPKIVLLIFVSGKIVITGAKMREE 180

Query: 181 TYTAFENIYPVLTEFRKNQQ 201
           TYTAFENIYPVL EFRK QQ
Sbjct: 181 TYTAFENIYPVLREFRKVQQ 200

[Close]
BLAST of Carg12920 vs. TAIR 10
Match: AT3G13445.1 (TATA binding protein 1 )

HSP 1 Score: 367.1 bits (941), Expect = 9.1e-102
Identity = 184/200 (92.00%), Postives = 191/200 (95.50%), Query Frame = 0 

Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60
           M DQGLEG+ PVDL KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
Sbjct: 1   MTDQGLEGSNPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120
           IMRIREPKTTALIFASGKMVCTGAKSE  SK+AARKYARI+QKLGFPAKFKDFKIQNIVG
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEDFSKMAARKYARIVQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSH AFSSYEPELFPGLIYRMK PKIVLLIFVSGKIV+TGAK+R+E
Sbjct: 121 SCDVKFPIRLEGLAYSHAAFSSYEPELFPGLIYRMKVPKIVLLIFVSGKIVITGAKMRDE 180

Query: 181 TYTAFENIYPVLTEFRKNQQ 201
           TY AFENIYPVL+EFRK QQ
Sbjct: 181 TYKAFENIYPVLSEFRKIQQ 200

[Close]
BLAST of Carg12920 vs. TAIR 10
Match: AT3G13445.2 (TATA binding protein 1 )

HSP 1 Score: 330.1 bits (845), Expect = 1.2e-90
Identity = 166/177 (93.79%), Postives = 170/177 (96.05%), Query Frame = 0 

Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60
           M DQGLEG+ PVDL KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
Sbjct: 1   MTDQGLEGSNPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120
           IMRIREPKTTALIFASGKMVCTGAKSE  SK+AARKYARI+QKLGFPAKFKDFKIQNIVG
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEDFSKMAARKYARIVQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKV 178
           SCDVKFPIRLEGLAYSH AFSSYEPELFPGLIYRMK PKIVLLIFVSGKIV+TGAKV
Sbjct: 121 SCDVKFPIRLEGLAYSHAAFSSYEPELFPGLIYRMKVPKIVLLIFVSGKIVITGAKV 177

[Close]
BLAST of Carg12920 vs. TAIR 10
Match: AT3G13440.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein )

HSP 1 Score: 44.7 bits (104), Expect = 1.0e-04
Identity = 19/24 (79.17%), Postives = 21/24 (87.50%), Query Frame = 0 

Query: 1  MADQGLEGAQPVDLKKHPSGIVPT 25
          MADQGLE + P+DL KHPSGIVPT
Sbjct: 1  MADQGLEESNPMDLSKHPSGIVPT 24

The following BLAST results are available for this feature:
BLAST of Carg12920 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6588117.13.4e-106100.00TATA-box-binding protein, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_004144066.13.4e-106100.00TATA-box-binding protein [Cucumis sativus] >XP_008450995.1 PREDICTED: TATA-box-b... [more]
KAG6590070.13.4e-106100.00TATA-box-binding protein, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_023927294.14.8e-10598.50TATA-box-binding protein [Quercus suber][more]
KAF3958623.11.1e-10498.00hypothetical protein CMV_016483 [Castanea mollissima][more]
BLAST of Carg12920 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P263574.1e-10797.50TATA-box-binding protein OS=Solanum tuberosum OX=4113 GN=TBP PE=2 SV=1[more]
Q428084.1e-10797.50TATA-box-binding protein OS=Glycine max OX=3847 GN=TBP1 PE=2 SV=1[more]
P485111.6e-10698.00TATA-box-binding protein OS=Mesembryanthemum crystallinum OX=3544 PE=2 SV=1[more]
P501591.7e-10597.00TATA-box-binding protein 2 OS=Zea mays OX=4577 GN=TBP2 PE=2 SV=1[more]
P933481.1e-10496.50TATA-box-binding protein OS=Nicotiana tabacum OX=4097 PE=2 SV=1[more]
BLAST of Carg12920 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JDU61.6e-106100.00TATA-box-binding protein OS=Cucurbita maxima OX=3661 GN=LOC111484910 PE=3 SV=1[more]
A0A6J1H9G61.6e-106100.00TATA-box-binding protein OS=Cucurbita moschata OX=3662 GN=LOC111461727 PE=3 SV=1[more]
A0A0A0LWT41.6e-106100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G599390 PE=3 SV=1[more]
A0A6J1D0P61.6e-106100.00TATA-box-binding protein OS=Momordica charantia OX=3673 GN=LOC111016510 PE=3 SV=... [more]
A0A1S3BPX81.6e-106100.00TATA-box-binding protein OS=Cucumis melo OX=3656 GN=LOC103492411 PE=3 SV=1[more]
BLAST of Carg12920 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G55520.12.8e-10394.00TATA binding protein 2 [more]
AT1G55520.22.8e-10394.00TATA binding protein 2 [more]
AT3G13445.19.1e-10292.00TATA binding protein 1 [more]
AT3G13445.21.2e-9093.79TATA binding protein 1 [more]
AT3G13440.11.0e-0479.17S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000814TATA-box binding proteinPRINTSPR00686TIFACTORIIDcoord: 139..154
score: 86.3
coord: 158..174
score: 85.86
coord: 25..40
score: 78.59
coord: 49..68
score: 84.68
coord: 115..131
score: 82.48
coord: 68..86
score: 86.79
IPR000814TATA-box binding proteinPFAMPF00352TBPcoord: 24..103
e-value: 6.4E-33
score: 112.5
coord: 112..194
e-value: 1.6E-32
score: 111.2
IPR000814TATA-box binding proteinPANTHERPTHR10126TATA-BOX BINDING PROTEINcoord: 1..200
IPR000814TATA-box binding proteinHAMAPMF_00408TATA_bind_prot_archcoord: 19..198
score: 27.844849
IPR012295TBP domain superfamilyGENE3D3.30.310.10coord: 26..195
e-value: 3.3E-91
score: 305.3
IPR012295TBP domain superfamilyGENE3D3.30.310.10coord: 30..115
e-value: 3.3E-91
score: 305.3
NoneNo IPR availablePANTHERPTHR10126:SF48TATA-BOX-BINDING PROTEIN 1coord: 1..200
NoneNo IPR availableSUPERFAMILY55945TATA-box binding protein-likecoord: 21..114
NoneNo IPR availableSUPERFAMILY55945TATA-box binding protein-likecoord: 112..198
IPR030491TATA-box binding protein, conserved sitePROSITEPS00351TFIIDcoord: 143..192
IPR033710TATA-box binding protein, eukaryoticCDDcd04516TBP_eukaryotescoord: 22..195
e-value: 2.20277E-131
score: 364.233

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg12920-RACarg12920-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006352 DNA-templated transcription, initiation
biological_process GO:0006366 transcription by RNA polymerase II
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0016251 RNA polymerase II general transcription initiation factor activity