Carg12907 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg12907
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPentatricopeptide repeat-containing protein
LocationCarg_Chr05: 10306165 .. 10308864 (+)
RNA-Seq ExpressionCarg12907
SyntenyCarg12907
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTATTTCAAAATCTGAGCTCCAAGCTTCCCTCTTGGGCCTCTTCTCGAATCTCCCCATTCAGAAACCAATTCCATCAAAACCCATTTGCAGAAACCTCCTCAACATTCGTCCTCAACCCAACCCAAGCTTCCTTCTGTCCGTTTGTGGAAGACACGGCAACCTCTATTTGGGCTCTTCTCTCCATGCCTCCATCATCAAGAGCTTCGAGCTCTCCAACCATGAAAATGGGGTCGTCATAATGAACTCTCTCATCTCCATGTACGAGAGGTGTGGTAAATTGCCGGATGCTGTCAAGGTGTTTGATGAAATGCCCACGAGAGATACTGTTTCGTGGAACGCATTGATTGGTGGGTTTATGAGAAATGGGGAGTTCTATGCTGGTTTTAGCTATTTTAAGGCTATGTGTTTAGTTGGTGATTGTAAATTTGATAAAGCTACTTTGACGACGATTTTATCTGCTTGTGATGGCGCGGAGATGTATTGCATCATTGAAATGATGCACGGTTTGACGTTTTTGAGTGGATATGAACAAGAAATTACTGTGGGAAATGCTCTGATTAGTTCGTATTTTAAATGTGGATGTGTTGGTTTTGGGAAGCAAGTTTTTTATGAGACGGAGGAGAGAAATGTGATTACTTGGACGGCTGTGATCTCTGGTTTGGCTCAAAATGGGCATCATGAGCACAGCCTGGAGCTGTTTAGGGAGATGATGAGTTGTGGCTCTGTGGAGCCAAATTCTTTGACTTATTTGAGCTTACTCACTGCTTGTTCTGGTTTGGAGGCATTAGAGGAAGGATGTCAAATTCATGGTCTTATTTTGAAGTTGGGAATTCAGTCAGATTTGTGCATTGGGAGTGCTCTGATGGATATGTACTCAAAATGTGGAAGCATTGGAGATGCTTGGAAGATTTTTGAGTTGGCTGAGGAACTCGATATGGTTTCGTTGACTGTTATTCTTGCAGGGTTCACACAGAATGGATGTGAGGAAGAAGCCATCCAAATCTTTCTGAAAATGTTGAAAATGGGGATTGAGATTGACGAAAATGTTGTTTCAGCTGTTCTTGGAGTGTTTGGTGCTGATACATCTTTGAGGCTGGGTCAACAAGTTCATTCGTTTATTGTCAAAAAGAACTTCAGTTGCAATCCTTTTGTGAGCAATGGACTTATAAACATGTACTCCAAGTGTGGAGCACTGGATGAATCAGTGAAGGTCTTTGATAGGATGCAAAATAGGAACTCTGTCACATGGAACTCCATGATTGCAGCATTTGCTCGACATGGAGATGGCTCGAAAGCTCTACATCTTTACGAGAATATGAAACTGGAAGGTGCAAAGCCAACAGACATCACGTTTCTATCATTACTCCATGCTTGTAGCCATGTTGGGTTAGTAAATAAAGGTATGGAGTTCCTTGAATCAATGACAAAAGATCACAGGATGAATCCTAGGAGTGAACACTACGCTTGTGTTGTCGACATGTTGGGTAGAGCAGGACTGCTGTCTGAAGCTAGAACCTTCATTGAGAAACTGCCTGAACAGCCAGGATTACTCGTGTGGCAGGCGTTGCTCGGCGCCTGCAGCCTCTACGGTGATTCAGAAATGGGGAAATATGCAGCCGAACATCTGTTTTCAGAAACGCCGTATAGCTCAGTCCCTTATGTTCTGTTAGCCAACATATATTCTTCTGAGGGGAATTGGAAGGAAAGAGCAAGGACAATTAGGAAGATGAAGGAGACGGGAATGGCCAAAGAAACTGGCATCAGTTGGATAGAGATTGACAAGAAAGTCCATAGTTTTACTGTTGGAGACAAAAGGCATCCACAAGCTGATATCATTTATGGAGTTTTGATGGATCTGTTTGTACACATGGTAGATGAAGGATATGTACCAGATAAGAAATTCATCCTCTTCTACTTGGATCCTGATGACAAGAAGGAACCGATCGATAACGATAACGGTCGTGTTAACGATCCAAACTTATTCCCCTCTCTGGTATGAATACTAGACATGAGCTGTTATTATAATGACGTCCTTCCCACTTATGAAGGCTACCCATATTATTGTGTAGATAGGCTCCCCATGTTCACTTTTGCTTCTTCCACCAGGCCAGCCAGGGCCACTTACTCAAGGTTAGTTAGGGTAATAAATCAATTATAATTTCAAATTTGGGTGCATCACCAAAAGGTTTATGACATGTTTATCATTTTAATGATGATTTCTTGATTTATTTCTTGTAATTACGACGAAGCGAGGATTGACATGTTCATATTGTAGTTCACTGACTCATGCCCCATAAGTTGTAGACATTATGTTAACACCTTTGCAATTTCATAACTAGAGATGTTAAAACTTGATATGGGCCACGTTTTCTTCATCTTTTAAAGAAAACTATTAATCATTTTTCGCCATTCTTAGAGTACCATAAGTTTAATAACCATTGTATACTGTTCTTGAGCATCAAAGATAACATGAAATGCTACATTATAGGTGAAAAAGGTAATTTCCACAAGTTCAGCTAAAATTTACCCCTAGTTATTCACTGATAGCATATAATACAAAGTTGAGATTACTGTCATGCCATTTCTTTTAAGGTATTTCTCTTCAAGGTTGATTTTGGATATGTGATTCTTGTCTGCAGAAGATTCACTTATCAATGTATCTTGGCTTTACCATAAGGAAAATTTGATGAGATAG

mRNA sequence

ATGGGTATTTCAAAATCTGAGCTCCAAGCTTCCCTCTTGGGCCTCTTCTCGAATCTCCCCATTCAGAAACCAATTCCATCAAAACCCATTTGCAGAAACCTCCTCAACATTCGTCCTCAACCCAACCCAAGCTTCCTTCTGTCCGTTTGTGGAAGACACGGCAACCTCTATTTGGGCTCTTCTCTCCATGCCTCCATCATCAAGAGCTTCGAGCTCTCCAACCATGAAAATGGGGTCGTCATAATGAACTCTCTCATCTCCATGTACGAGAGGTGTGGTAAATTGCCGGATGCTGTCAAGGTGTTTGATGAAATGCCCACGAGAGATACTGTTTCGTGGAACGCATTGATTGGTGGGTTTATGAGAAATGGGGAGTTCTATGCTGGTTTTAGCTATTTTAAGGCTATGTGTTTAGTTGGTGATTGTAAATTTGATAAAGCTACTTTGACGACGATTTTATCTGCTTGTGATGGCGCGGAGATGTATTGCATCATTGAAATGATGCACGGTTTGACGTTTTTGAGTGGATATGAACAAGAAATTACTGTGGGAAATGCTCTGATTAGTTCGTATTTTAAATGTGGATGTGTTGGTTTTGGGAAGCAAGTTTTTTATGAGACGGAGGAGAGAAATGTGATTACTTGGACGGCTGTGATCTCTGGTTTGGCTCAAAATGGGCATCATGAGCACAGCCTGGAGCTGTTTAGGGAGATGATGAGTTGTGGCTCTGTGGAGCCAAATTCTTTGACTTATTTGAGCTTACTCACTGCTTGTTCTGGTTTGGAGGCATTAGAGGAAGGATGTCAAATTCATGGTCTTATTTTGAAGTTGGGAATTCAGTCAGATTTGTGCATTGGGAGTGCTCTGATGGATATGTACTCAAAATGTGGAAGCATTGGAGATGCTTGGAAGATTTTTGAGTTGGCTGAGGAACTCGATATGGTTTCGTTGACTGTTATTCTTGCAGGGTTCACACAGAATGGATGTGAGGAAGAAGCCATCCAAATCTTTCTGAAAATGTTGAAAATGGGGATTGAGATTGACGAAAATGTTGTTTCAGCTGTTCTTGGAGTGTTTGGTGCTGATACATCTTTGAGGCTGGGTCAACAAGTTCATTCGTTTATTGTCAAAAAGAACTTCAGTTGCAATCCTTTTGTGAGCAATGGACTTATAAACATGTACTCCAAGTGTGGAGCACTGGATGAATCAGTGAAGGTCTTTGATAGGATGCAAAATAGGAACTCTGTCACATGGAACTCCATGATTGCAGCATTTGCTCGACATGGAGATGGCTCGAAAGCTCTACATCTTTACGAGAATATGAAACTGGAAGGTGCAAAGCCAACAGACATCACGTTTCTATCATTACTCCATGCTTGTAGCCATGTTGGGTTAGTAAATAAAGGTATGGAGTTCCTTGAATCAATGACAAAAGATCACAGGATGAATCCTAGGAGTGAACACTACGCTTGTGTTGTCGACATGTTGGGTAGAGCAGGACTGCTGTCTGAAGCTAGAACCTTCATTGAGAAACTGCCTGAACAGCCAGGATTACTCGTGTGGCAGGCGTTGCTCGGCGCCTGCAGCCTCTACGGTGATTCAGAAATGGGGAAATATGCAGCCGAACATCTGTTTTCAGAAACGCCGTATAGCTCAGTCCCTTATGTTCTGTTAGCCAACATATATTCTTCTGAGGGGAATTGGAAGGAAAGAGCAAGGACAATTAGGAAGATGAAGGAGACGGGAATGGCCAAAGAAACTGGCATCAGTTGGATAGAGATTGACAAGAAAGTCCATAGTTTTACTGTTGGAGACAAAAGGCATCCACAAGCTGATATCATTTATGGAGTTTTGATGGATCTGTTTGTACACATGGTAGATGAAGGATATGTACCAGATAAGAAATTCATCCTCTTCTACTTGGATCCTGATGACAAGAAGGAACCGATCGATAACGATAACGGTCGTGTTAACGATCCAAACTTATTCCCCTCTCTGATAGGCTCCCCATGTTCACTTTTGCTTCTTCCACCAGGCCAGCCAGGGCCACTTACTCAAGAAGATTCACTTATCAATGTATCTTGGCTTTACCATAAGGAAAATTTGATGAGATAG

Coding sequence (CDS)

ATGGGTATTTCAAAATCTGAGCTCCAAGCTTCCCTCTTGGGCCTCTTCTCGAATCTCCCCATTCAGAAACCAATTCCATCAAAACCCATTTGCAGAAACCTCCTCAACATTCGTCCTCAACCCAACCCAAGCTTCCTTCTGTCCGTTTGTGGAAGACACGGCAACCTCTATTTGGGCTCTTCTCTCCATGCCTCCATCATCAAGAGCTTCGAGCTCTCCAACCATGAAAATGGGGTCGTCATAATGAACTCTCTCATCTCCATGTACGAGAGGTGTGGTAAATTGCCGGATGCTGTCAAGGTGTTTGATGAAATGCCCACGAGAGATACTGTTTCGTGGAACGCATTGATTGGTGGGTTTATGAGAAATGGGGAGTTCTATGCTGGTTTTAGCTATTTTAAGGCTATGTGTTTAGTTGGTGATTGTAAATTTGATAAAGCTACTTTGACGACGATTTTATCTGCTTGTGATGGCGCGGAGATGTATTGCATCATTGAAATGATGCACGGTTTGACGTTTTTGAGTGGATATGAACAAGAAATTACTGTGGGAAATGCTCTGATTAGTTCGTATTTTAAATGTGGATGTGTTGGTTTTGGGAAGCAAGTTTTTTATGAGACGGAGGAGAGAAATGTGATTACTTGGACGGCTGTGATCTCTGGTTTGGCTCAAAATGGGCATCATGAGCACAGCCTGGAGCTGTTTAGGGAGATGATGAGTTGTGGCTCTGTGGAGCCAAATTCTTTGACTTATTTGAGCTTACTCACTGCTTGTTCTGGTTTGGAGGCATTAGAGGAAGGATGTCAAATTCATGGTCTTATTTTGAAGTTGGGAATTCAGTCAGATTTGTGCATTGGGAGTGCTCTGATGGATATGTACTCAAAATGTGGAAGCATTGGAGATGCTTGGAAGATTTTTGAGTTGGCTGAGGAACTCGATATGGTTTCGTTGACTGTTATTCTTGCAGGGTTCACACAGAATGGATGTGAGGAAGAAGCCATCCAAATCTTTCTGAAAATGTTGAAAATGGGGATTGAGATTGACGAAAATGTTGTTTCAGCTGTTCTTGGAGTGTTTGGTGCTGATACATCTTTGAGGCTGGGTCAACAAGTTCATTCGTTTATTGTCAAAAAGAACTTCAGTTGCAATCCTTTTGTGAGCAATGGACTTATAAACATGTACTCCAAGTGTGGAGCACTGGATGAATCAGTGAAGGTCTTTGATAGGATGCAAAATAGGAACTCTGTCACATGGAACTCCATGATTGCAGCATTTGCTCGACATGGAGATGGCTCGAAAGCTCTACATCTTTACGAGAATATGAAACTGGAAGGTGCAAAGCCAACAGACATCACGTTTCTATCATTACTCCATGCTTGTAGCCATGTTGGGTTAGTAAATAAAGGTATGGAGTTCCTTGAATCAATGACAAAAGATCACAGGATGAATCCTAGGAGTGAACACTACGCTTGTGTTGTCGACATGTTGGGTAGAGCAGGACTGCTGTCTGAAGCTAGAACCTTCATTGAGAAACTGCCTGAACAGCCAGGATTACTCGTGTGGCAGGCGTTGCTCGGCGCCTGCAGCCTCTACGGTGATTCAGAAATGGGGAAATATGCAGCCGAACATCTGTTTTCAGAAACGCCGTATAGCTCAGTCCCTTATGTTCTGTTAGCCAACATATATTCTTCTGAGGGGAATTGGAAGGAAAGAGCAAGGACAATTAGGAAGATGAAGGAGACGGGAATGGCCAAAGAAACTGGCATCAGTTGGATAGAGATTGACAAGAAAGTCCATAGTTTTACTGTTGGAGACAAAAGGCATCCACAAGCTGATATCATTTATGGAGTTTTGATGGATCTGTTTGTACACATGGTAGATGAAGGATATGTACCAGATAAGAAATTCATCCTCTTCTACTTGGATCCTGATGACAAGAAGGAACCGATCGATAACGATAACGGTCGTGTTAACGATCCAAACTTATTCCCCTCTCTGATAGGCTCCCCATGTTCACTTTTGCTTCTTCCACCAGGCCAGCCAGGGCCACTTACTCAAGAAGATTCACTTATCAATGTATCTTGGCTTTACCATAAGGAAAATTTGATGAGATAG

Protein sequence

MGISKSELQASLLGLFSNLPIQKPIPSKPICRNLLNIRPQPNPSFLLSVCGRHGNLYLGSSLHASIIKSFELSNHENGVVIMNSLISMYERCGKLPDAVKVFDEMPTRDTVSWNALIGGFMRNGEFYAGFSYFKAMCLVGDCKFDKATLTTILSACDGAEMYCIIEMMHGLTFLSGYEQEITVGNALISSYFKCGCVGFGKQVFYETEERNVITWTAVISGLAQNGHHEHSLELFREMMSCGSVEPNSLTYLSLLTACSGLEALEEGCQIHGLILKLGIQSDLCIGSALMDMYSKCGSIGDAWKIFELAEELDMVSLTVILAGFTQNGCEEEAIQIFLKMLKMGIEIDENVVSAVLGVFGADTSLRLGQQVHSFIVKKNFSCNPFVSNGLINMYSKCGALDESVKVFDRMQNRNSVTWNSMIAAFARHGDGSKALHLYENMKLEGAKPTDITFLSLLHACSHVGLVNKGMEFLESMTKDHRMNPRSEHYACVVDMLGRAGLLSEARTFIEKLPEQPGLLVWQALLGACSLYGDSEMGKYAAEHLFSETPYSSVPYVLLANIYSSEGNWKERARTIRKMKETGMAKETGISWIEIDKKVHSFTVGDKRHPQADIIYGVLMDLFVHMVDEGYVPDKKFILFYLDPDDKKEPIDNDNGRVNDPNLFPSLIGSPCSLLLLPPGQPGPLTQEDSLINVSWLYHKENLMR
Homology
BLAST of Carg12907 vs. NCBI nr
Match: KAG7030242.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1440.2 bits (3727), Expect = 0.0e+00
Identity = 704/704 (100.00%), Postives = 704/704 (100.00%), Query Frame = 0

Query: 1   MGISKSELQASLLGLFSNLPIQKPIPSKPICRNLLNIRPQPNPSFLLSVCGRHGNLYLGS 60
           MGISKSELQASLLGLFSNLPIQKPIPSKPICRNLLNIRPQPNPSFLLSVCGRHGNLYLGS
Sbjct: 1   MGISKSELQASLLGLFSNLPIQKPIPSKPICRNLLNIRPQPNPSFLLSVCGRHGNLYLGS 60

Query: 61  SLHASIIKSFELSNHENGVVIMNSLISMYERCGKLPDAVKVFDEMPTRDTVSWNALIGGF 120
           SLHASIIKSFELSNHENGVVIMNSLISMYERCGKLPDAVKVFDEMPTRDTVSWNALIGGF
Sbjct: 61  SLHASIIKSFELSNHENGVVIMNSLISMYERCGKLPDAVKVFDEMPTRDTVSWNALIGGF 120

Query: 121 MRNGEFYAGFSYFKAMCLVGDCKFDKATLTTILSACDGAEMYCIIEMMHGLTFLSGYEQE 180
           MRNGEFYAGFSYFKAMCLVGDCKFDKATLTTILSACDGAEMYCIIEMMHGLTFLSGYEQE
Sbjct: 121 MRNGEFYAGFSYFKAMCLVGDCKFDKATLTTILSACDGAEMYCIIEMMHGLTFLSGYEQE 180

Query: 181 ITVGNALISSYFKCGCVGFGKQVFYETEERNVITWTAVISGLAQNGHHEHSLELFREMMS 240
           ITVGNALISSYFKCGCVGFGKQVFYETEERNVITWTAVISGLAQNGHHEHSLELFREMMS
Sbjct: 181 ITVGNALISSYFKCGCVGFGKQVFYETEERNVITWTAVISGLAQNGHHEHSLELFREMMS 240

Query: 241 CGSVEPNSLTYLSLLTACSGLEALEEGCQIHGLILKLGIQSDLCIGSALMDMYSKCGSIG 300
           CGSVEPNSLTYLSLLTACSGLEALEEGCQIHGLILKLGIQSDLCIGSALMDMYSKCGSIG
Sbjct: 241 CGSVEPNSLTYLSLLTACSGLEALEEGCQIHGLILKLGIQSDLCIGSALMDMYSKCGSIG 300

Query: 301 DAWKIFELAEELDMVSLTVILAGFTQNGCEEEAIQIFLKMLKMGIEIDENVVSAVLGVFG 360
           DAWKIFELAEELDMVSLTVILAGFTQNGCEEEAIQIFLKMLKMGIEIDENVVSAVLGVFG
Sbjct: 301 DAWKIFELAEELDMVSLTVILAGFTQNGCEEEAIQIFLKMLKMGIEIDENVVSAVLGVFG 360

Query: 361 ADTSLRLGQQVHSFIVKKNFSCNPFVSNGLINMYSKCGALDESVKVFDRMQNRNSVTWNS 420
           ADTSLRLGQQVHSFIVKKNFSCNPFVSNGLINMYSKCGALDESVKVFDRMQNRNSVTWNS
Sbjct: 361 ADTSLRLGQQVHSFIVKKNFSCNPFVSNGLINMYSKCGALDESVKVFDRMQNRNSVTWNS 420

Query: 421 MIAAFARHGDGSKALHLYENMKLEGAKPTDITFLSLLHACSHVGLVNKGMEFLESMTKDH 480
           MIAAFARHGDGSKALHLYENMKLEGAKPTDITFLSLLHACSHVGLVNKGMEFLESMTKDH
Sbjct: 421 MIAAFARHGDGSKALHLYENMKLEGAKPTDITFLSLLHACSHVGLVNKGMEFLESMTKDH 480

Query: 481 RMNPRSEHYACVVDMLGRAGLLSEARTFIEKLPEQPGLLVWQALLGACSLYGDSEMGKYA 540
           RMNPRSEHYACVVDMLGRAGLLSEARTFIEKLPEQPGLLVWQALLGACSLYGDSEMGKYA
Sbjct: 481 RMNPRSEHYACVVDMLGRAGLLSEARTFIEKLPEQPGLLVWQALLGACSLYGDSEMGKYA 540

Query: 541 AEHLFSETPYSSVPYVLLANIYSSEGNWKERARTIRKMKETGMAKETGISWIEIDKKVHS 600
           AEHLFSETPYSSVPYVLLANIYSSEGNWKERARTIRKMKETGMAKETGISWIEIDKKVHS
Sbjct: 541 AEHLFSETPYSSVPYVLLANIYSSEGNWKERARTIRKMKETGMAKETGISWIEIDKKVHS 600

Query: 601 FTVGDKRHPQADIIYGVLMDLFVHMVDEGYVPDKKFILFYLDPDDKKEPIDNDNGRVNDP 660
           FTVGDKRHPQADIIYGVLMDLFVHMVDEGYVPDKKFILFYLDPDDKKEPIDNDNGRVNDP
Sbjct: 601 FTVGDKRHPQADIIYGVLMDLFVHMVDEGYVPDKKFILFYLDPDDKKEPIDNDNGRVNDP 660

Query: 661 NLFPSLIGSPCSLLLLPPGQPGPLTQEDSLINVSWLYHKENLMR 705
           NLFPSLIGSPCSLLLLPPGQPGPLTQEDSLINVSWLYHKENLMR
Sbjct: 661 NLFPSLIGSPCSLLLLPPGQPGPLTQEDSLINVSWLYHKENLMR 704

BLAST of Carg12907 vs. NCBI nr
Match: KAG6599242.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1358.6 bits (3515), Expect = 0.0e+00
Identity = 662/663 (99.85%), Postives = 663/663 (100.00%), Query Frame = 0

Query: 42  NPSFLLSVCGRHGNLYLGSSLHASIIKSFELSNHENGVVIMNSLISMYERCGKLPDAVKV 101
           +PSFLLSVCGRHGNLYLGSSLHASIIKSFELSNHENGVVIMNSLISMYERCGKLPDAVKV
Sbjct: 47  DPSFLLSVCGRHGNLYLGSSLHASIIKSFELSNHENGVVIMNSLISMYERCGKLPDAVKV 106

Query: 102 FDEMPTRDTVSWNALIGGFMRNGEFYAGFSYFKAMCLVGDCKFDKATLTTILSACDGAEM 161
           FDEMPTRDTVSWNALIGGFMRNGEFYAGFSYFKAMCLVGDCKFDKATLTTILSACDGAEM
Sbjct: 107 FDEMPTRDTVSWNALIGGFMRNGEFYAGFSYFKAMCLVGDCKFDKATLTTILSACDGAEM 166

Query: 162 YCIIEMMHGLTFLSGYEQEITVGNALISSYFKCGCVGFGKQVFYETEERNVITWTAVISG 221
           YCIIEMMHGLTFLSGYEQEITVGNALISSYFKCGCVGFGKQVFYETEERNVITWTAVISG
Sbjct: 167 YCIIEMMHGLTFLSGYEQEITVGNALISSYFKCGCVGFGKQVFYETEERNVITWTAVISG 226

Query: 222 LAQNGHHEHSLELFREMMSCGSVEPNSLTYLSLLTACSGLEALEEGCQIHGLILKLGIQS 281
           LAQNGHHEHSLELFREMMSCGSVEPNSLTYLSLLTACSGLEALEEGCQIHGLILKLGIQS
Sbjct: 227 LAQNGHHEHSLELFREMMSCGSVEPNSLTYLSLLTACSGLEALEEGCQIHGLILKLGIQS 286

Query: 282 DLCIGSALMDMYSKCGSIGDAWKIFELAEELDMVSLTVILAGFTQNGCEEEAIQIFLKML 341
           DLCIGSALMDMYSKCGSIGDAWKIFELAEELDMVSLTVILAGFTQNGCEEEAIQIFLKML
Sbjct: 287 DLCIGSALMDMYSKCGSIGDAWKIFELAEELDMVSLTVILAGFTQNGCEEEAIQIFLKML 346

Query: 342 KMGIEIDENVVSAVLGVFGADTSLRLGQQVHSFIVKKNFSCNPFVSNGLINMYSKCGALD 401
           KMGIEIDENVVSAVLGVFGADTSLRLGQQVHSFIVKKNFSCNPFVSNGLINMYSKCGALD
Sbjct: 347 KMGIEIDENVVSAVLGVFGADTSLRLGQQVHSFIVKKNFSCNPFVSNGLINMYSKCGALD 406

Query: 402 ESVKVFDRMQNRNSVTWNSMIAAFARHGDGSKALHLYENMKLEGAKPTDITFLSLLHACS 461
           ESVKVFDRMQNRNSVTWNSMIAAFARHGDGSKALHLYENMKLEGAKPTDITFLSLLHACS
Sbjct: 407 ESVKVFDRMQNRNSVTWNSMIAAFARHGDGSKALHLYENMKLEGAKPTDITFLSLLHACS 466

Query: 462 HVGLVNKGMEFLESMTKDHRMNPRSEHYACVVDMLGRAGLLSEARTFIEKLPEQPGLLVW 521
           HVGLVNKGMEFLESMTKDHRMNPRSEHYACVVDMLGRAGLLSEARTFIEKLPEQPGLLVW
Sbjct: 467 HVGLVNKGMEFLESMTKDHRMNPRSEHYACVVDMLGRAGLLSEARTFIEKLPEQPGLLVW 526

Query: 522 QALLGACSLYGDSEMGKYAAEHLFSETPYSSVPYVLLANIYSSEGNWKERARTIRKMKET 581
           QALLGACSLYGDSEMGKYAAEHLFSETPYSSVPYVLLANIYSSEGNWKERARTIRKMKET
Sbjct: 527 QALLGACSLYGDSEMGKYAAEHLFSETPYSSVPYVLLANIYSSEGNWKERARTIRKMKET 586

Query: 582 GMAKETGISWIEIDKKVHSFTVGDKRHPQADIIYGVLMDLFVHMVDEGYVPDKKFILFYL 641
           GMAKETGISWIEIDKKVHSFTVGDKRHPQADIIYGVLMDLFVHMVDEGYVPDKKFILFYL
Sbjct: 587 GMAKETGISWIEIDKKVHSFTVGDKRHPQADIIYGVLMDLFVHMVDEGYVPDKKFILFYL 646

Query: 642 DPDDKKEPIDNDNGRVNDPNLFPSLIGSPCSLLLLPPGQPGPLTQEDSLINVSWLYHKEN 701
           DPDDKKEPIDNDNGRVNDPNLFPSLIGSPCSLLLLPPGQPGPLTQEDSLINVSWLYHKEN
Sbjct: 647 DPDDKKEPIDNDNGRVNDPNLFPSLIGSPCSLLLLPPGQPGPLTQEDSLINVSWLYHKEN 706

Query: 702 LMR 705
           LMR
Sbjct: 707 LMR 709

BLAST of Carg12907 vs. NCBI nr
Match: XP_023546072.1 (pentatricopeptide repeat-containing protein At3g05340 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1296.2 bits (3353), Expect = 0.0e+00
Identity = 634/646 (98.14%), Postives = 641/646 (99.23%), Query Frame = 0

Query: 42  NPSFLLSVCGRHGNLYLGSSLHASIIKSFELSNHENGVVIMNSLISMYERCGKLPDAVKV 101
           +PSFLLSVCGRHG+LYLGSSLHASIIKSFELSNHENGVVIMNSLISMYERCGKLPDAVKV
Sbjct: 47  DPSFLLSVCGRHGHLYLGSSLHASIIKSFELSNHENGVVIMNSLISMYERCGKLPDAVKV 106

Query: 102 FDEMPTRDTVSWNALIGGFMRNGEFYAGFSYFKAMCLVGDCKFDKATLTTILSACDGAEM 161
           FDEMPTRDTVSWNALIGGFMRNGEFYAGFSYFKAM LVGDCKFDKATLTTILSACDG+EM
Sbjct: 107 FDEMPTRDTVSWNALIGGFMRNGEFYAGFSYFKAMSLVGDCKFDKATLTTILSACDGSEM 166

Query: 162 YCIIEMMHGLTFLSGYEQEITVGNALISSYFKCGCVGFGKQVFYETEERNVITWTAVISG 221
            CIIEMMHGLTFLSGYEQEITVGNALISSYFKCGCVGFG+QVFYE EERNVITWTAVISG
Sbjct: 167 CCIIEMMHGLTFLSGYEQEITVGNALISSYFKCGCVGFGRQVFYEMEERNVITWTAVISG 226

Query: 222 LAQNGHHEHSLELFREMMSCGSVEPNSLTYLSLLTACSGLEALEEGCQIHGLILKLGIQS 281
           LAQNGH+EHSLELFREMMSCGSVEPNSLTYLSLLTACSGLEALEEGCQIHGLILKLGIQS
Sbjct: 227 LAQNGHYEHSLELFREMMSCGSVEPNSLTYLSLLTACSGLEALEEGCQIHGLILKLGIQS 286

Query: 282 DLCIGSALMDMYSKCGSIGDAWKIFELAEELDMVSLTVILAGFTQNGCEEEAIQIFLKML 341
           DLCIGSALMDMYSKCGSIGDAWKIFE AEELDMVSLTVILAGFTQNGCEEEAIQIFLKML
Sbjct: 287 DLCIGSALMDMYSKCGSIGDAWKIFESAEELDMVSLTVILAGFTQNGCEEEAIQIFLKML 346

Query: 342 KMGIEIDENVVSAVLGVFGADTSLRLGQQVHSFIVKKNFSCNPFVSNGLINMYSKCGALD 401
           KMGIEIDENVVSAVLGVFGADTSLRLGQQVHSFIVKKNFSCNPFVSNGLINMYSKCGALD
Sbjct: 347 KMGIEIDENVVSAVLGVFGADTSLRLGQQVHSFIVKKNFSCNPFVSNGLINMYSKCGALD 406

Query: 402 ESVKVFDRMQNRNSVTWNSMIAAFARHGDGSKALHLYENMKLEGAKPTDITFLSLLHACS 461
           ESVKVFDRMQNRNSVTWNSMIAAFARHGDGSKALHLYENM+LEGAKPTDITFLSLLHACS
Sbjct: 407 ESVKVFDRMQNRNSVTWNSMIAAFARHGDGSKALHLYENMQLEGAKPTDITFLSLLHACS 466

Query: 462 HVGLVNKGMEFLESMTKDHRMNPRSEHYACVVDMLGRAGLLSEARTFIEKLPEQPGLLVW 521
           HVGLVNKGMEFLESMTKDHR+NPRSEHYACVVDMLGRAGLLSEARTFIEKLPEQPGLLVW
Sbjct: 467 HVGLVNKGMEFLESMTKDHRINPRSEHYACVVDMLGRAGLLSEARTFIEKLPEQPGLLVW 526

Query: 522 QALLGACSLYGDSEMGKYAAEHLFSETPYSSVPYVLLANIYSSEGNWKERARTIRKMKET 581
           QALLGACSLYGDSEMGKYAAEHLFSETPYSSVPYVLLANIYSSEGNWKERARTIRKMKET
Sbjct: 527 QALLGACSLYGDSEMGKYAAEHLFSETPYSSVPYVLLANIYSSEGNWKERARTIRKMKET 586

Query: 582 GMAKETGISWIEIDKKVHSFTVGDKRHPQADIIYGVLMDLFVHMVDEGYVPDKKFILFYL 641
           GMAKETGISWIEIDKKVHSFTVGDKRHPQADIIYGVLMDLFV MVDEGYVPDKKFILFYL
Sbjct: 587 GMAKETGISWIEIDKKVHSFTVGDKRHPQADIIYGVLMDLFVLMVDEGYVPDKKFILFYL 646

Query: 642 DPDDKKEPIDNDNGRVNDPNLFPSLIGSPCSLLLLPPGQPGPLTQE 688
           DPDDKKEPIDNDNGRVNDPNLFPSLIGSPCSLLLLPPGQPGPLTQE
Sbjct: 647 DPDDKKEPIDNDNGRVNDPNLFPSLIGSPCSLLLLPPGQPGPLTQE 692

BLAST of Carg12907 vs. NCBI nr
Match: XP_023545247.1 (pentatricopeptide repeat-containing protein At3g05340-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1296.2 bits (3353), Expect = 0.0e+00
Identity = 634/646 (98.14%), Postives = 641/646 (99.23%), Query Frame = 0

Query: 42  NPSFLLSVCGRHGNLYLGSSLHASIIKSFELSNHENGVVIMNSLISMYERCGKLPDAVKV 101
           +PSFLLSVCGRHG+LYLGSSLHASIIKSFELSNHENGVVIMNSLISMYERCGKLPDAVKV
Sbjct: 47  DPSFLLSVCGRHGHLYLGSSLHASIIKSFELSNHENGVVIMNSLISMYERCGKLPDAVKV 106

Query: 102 FDEMPTRDTVSWNALIGGFMRNGEFYAGFSYFKAMCLVGDCKFDKATLTTILSACDGAEM 161
           FDEMPTRDTVSWNALIGGFMRNGEFYAGFSYFKAM LVGDCKFDKATLTTILSACDG+EM
Sbjct: 107 FDEMPTRDTVSWNALIGGFMRNGEFYAGFSYFKAMSLVGDCKFDKATLTTILSACDGSEM 166

Query: 162 YCIIEMMHGLTFLSGYEQEITVGNALISSYFKCGCVGFGKQVFYETEERNVITWTAVISG 221
            CIIEMMHGLTFLSGYEQEITVGNALISSYFKCGCVGFG+QVFYE EERNVITWTAVISG
Sbjct: 167 CCIIEMMHGLTFLSGYEQEITVGNALISSYFKCGCVGFGRQVFYEMEERNVITWTAVISG 226

Query: 222 LAQNGHHEHSLELFREMMSCGSVEPNSLTYLSLLTACSGLEALEEGCQIHGLILKLGIQS 281
           LAQNGH+EHSLELFREMMSCGSVEPNSLTYLSLLTACSGLEALEEGCQIHGLILKLGIQS
Sbjct: 227 LAQNGHYEHSLELFREMMSCGSVEPNSLTYLSLLTACSGLEALEEGCQIHGLILKLGIQS 286

Query: 282 DLCIGSALMDMYSKCGSIGDAWKIFELAEELDMVSLTVILAGFTQNGCEEEAIQIFLKML 341
           DLCIGSALMDMYSKCGSIGDAWKIFE AEELDMVSLTVILAGFTQNGCEEEAIQIFLKML
Sbjct: 287 DLCIGSALMDMYSKCGSIGDAWKIFESAEELDMVSLTVILAGFTQNGCEEEAIQIFLKML 346

Query: 342 KMGIEIDENVVSAVLGVFGADTSLRLGQQVHSFIVKKNFSCNPFVSNGLINMYSKCGALD 401
           KMGIEIDENVVSAVLGVFGADTSLRLGQQVHSFIVKKNFSCNPFVSNGLINMYSKCGALD
Sbjct: 347 KMGIEIDENVVSAVLGVFGADTSLRLGQQVHSFIVKKNFSCNPFVSNGLINMYSKCGALD 406

Query: 402 ESVKVFDRMQNRNSVTWNSMIAAFARHGDGSKALHLYENMKLEGAKPTDITFLSLLHACS 461
           ESVKVFDRMQNRNSVTWNSMIAAFARHGDGSKALHLYENM+LEGAKPTDITFLSLLHACS
Sbjct: 407 ESVKVFDRMQNRNSVTWNSMIAAFARHGDGSKALHLYENMQLEGAKPTDITFLSLLHACS 466

Query: 462 HVGLVNKGMEFLESMTKDHRMNPRSEHYACVVDMLGRAGLLSEARTFIEKLPEQPGLLVW 521
           HVGLVNKGMEFLESMTKDHR+NPRSEHYACVVDMLGRAGLLSEARTFIEKLPEQPGLLVW
Sbjct: 467 HVGLVNKGMEFLESMTKDHRINPRSEHYACVVDMLGRAGLLSEARTFIEKLPEQPGLLVW 526

Query: 522 QALLGACSLYGDSEMGKYAAEHLFSETPYSSVPYVLLANIYSSEGNWKERARTIRKMKET 581
           QALLGACSLYGDSEMGKYAAEHLFSETPYSSVPYVLLANIYSSEGNWKERARTIRKMKET
Sbjct: 527 QALLGACSLYGDSEMGKYAAEHLFSETPYSSVPYVLLANIYSSEGNWKERARTIRKMKET 586

Query: 582 GMAKETGISWIEIDKKVHSFTVGDKRHPQADIIYGVLMDLFVHMVDEGYVPDKKFILFYL 641
           GMAKETGISWIEIDKKVHSFTVGDKRHPQADIIYGVLMDLFV MVDEGYVPDKKFILFYL
Sbjct: 587 GMAKETGISWIEIDKKVHSFTVGDKRHPQADIIYGVLMDLFVLMVDEGYVPDKKFILFYL 646

Query: 642 DPDDKKEPIDNDNGRVNDPNLFPSLIGSPCSLLLLPPGQPGPLTQE 688
           DPDDKKEPIDNDNGRVNDPNLFPSLIGSPCSLLLLPPGQPGPLTQE
Sbjct: 647 DPDDKKEPIDNDNGRVNDPNLFPSLIGSPCSLLLLPPGQPGPLTQE 692

BLAST of Carg12907 vs. NCBI nr
Match: XP_022946255.1 (pentatricopeptide repeat-containing protein At3g05340 isoform X2 [Cucurbita moschata])

HSP 1 Score: 1287.7 bits (3331), Expect = 0.0e+00
Identity = 631/646 (97.68%), Postives = 637/646 (98.61%), Query Frame = 0

Query: 42  NPSFLLSVCGRHGNLYLGSSLHASIIKSFELSNHENGVVIMNSLISMYERCGKLPDAVKV 101
           +PSFLLSVCGR G+LYLGSSLHASIIKSFELSNHENGVVIMNSLISMYERCGKLPDAVKV
Sbjct: 47  DPSFLLSVCGRDGHLYLGSSLHASIIKSFELSNHENGVVIMNSLISMYERCGKLPDAVKV 106

Query: 102 FDEMPTRDTVSWNALIGGFMRNGEFYAGFSYFKAMCLVGDCKFDKATLTTILSACDGAEM 161
           FDEMPTRDTVSWNALIGGFMRNGEF AGFSYFKAMCLVGDCKFDKATLTTILSACDG EM
Sbjct: 107 FDEMPTRDTVSWNALIGGFMRNGEFCAGFSYFKAMCLVGDCKFDKATLTTILSACDGLEM 166

Query: 162 YCIIEMMHGLTFLSGYEQEITVGNALISSYFKCGCVGFGKQVFYETEERNVITWTAVISG 221
            CII+MMHGLTFLSGY+QEITVGNALISSYFKCGCVGFGKQVFYE EERNVITWTAVISG
Sbjct: 167 CCIIKMMHGLTFLSGYKQEITVGNALISSYFKCGCVGFGKQVFYEMEERNVITWTAVISG 226

Query: 222 LAQNGHHEHSLELFREMMSCGSVEPNSLTYLSLLTACSGLEALEEGCQIHGLILKLGIQS 281
           LAQNG+HEHSLELFREM+SCGSVEPNSLTYLSLLTACSGLEALEEGCQIHGLILKLGIQS
Sbjct: 227 LAQNGYHEHSLELFREMLSCGSVEPNSLTYLSLLTACSGLEALEEGCQIHGLILKLGIQS 286

Query: 282 DLCIGSALMDMYSKCGSIGDAWKIFELAEELDMVSLTVILAGFTQNGCEEEAIQIFLKML 341
           DLCIGSALMDMYSKCGSIGDAWKIFE AEELDMVSLTVILAGFTQNGCEEEAIQIFLKML
Sbjct: 287 DLCIGSALMDMYSKCGSIGDAWKIFESAEELDMVSLTVILAGFTQNGCEEEAIQIFLKML 346

Query: 342 KMGIEIDENVVSAVLGVFGADTSLRLGQQVHSFIVKKNFSCNPFVSNGLINMYSKCGALD 401
           KMGIEIDENVVSAVLGVFGADTSLRLGQQVHSFIVKKNFSCNPFVSNGLINMYSKCGALD
Sbjct: 347 KMGIEIDENVVSAVLGVFGADTSLRLGQQVHSFIVKKNFSCNPFVSNGLINMYSKCGALD 406

Query: 402 ESVKVFDRMQNRNSVTWNSMIAAFARHGDGSKALHLYENMKLEGAKPTDITFLSLLHACS 461
           ESVKVFDRMQNRNSVTWNSMIAAFARHGDG KALHLYENMKLEGAKPTDITFLSLLHACS
Sbjct: 407 ESVKVFDRMQNRNSVTWNSMIAAFARHGDGLKALHLYENMKLEGAKPTDITFLSLLHACS 466

Query: 462 HVGLVNKGMEFLESMTKDHRMNPRSEHYACVVDMLGRAGLLSEARTFIEKLPEQPGLLVW 521
           HVGLVNKGMEFLESMTKDHRMNPRSEHYACVVDMLGRAGLLSEARTFIEKLPEQPGLLVW
Sbjct: 467 HVGLVNKGMEFLESMTKDHRMNPRSEHYACVVDMLGRAGLLSEARTFIEKLPEQPGLLVW 526

Query: 522 QALLGACSLYGDSEMGKYAAEHLFSETPYSSVPYVLLANIYSSEGNWKERARTIRKMKET 581
           QALLGACSLYGDSEMGKYAAEHLFSETP SSVPYVLLANIYSSEGNWKERARTIRKMKET
Sbjct: 527 QALLGACSLYGDSEMGKYAAEHLFSETPNSSVPYVLLANIYSSEGNWKERARTIRKMKET 586

Query: 582 GMAKETGISWIEIDKKVHSFTVGDKRHPQADIIYGVLMDLFVHMVDEGYVPDKKFILFYL 641
           GMAKETGISWIEIDKKVHSFTVGDKRHPQADIIYGVLMDLFVHMVDEGYVPDKKFILFYL
Sbjct: 587 GMAKETGISWIEIDKKVHSFTVGDKRHPQADIIYGVLMDLFVHMVDEGYVPDKKFILFYL 646

Query: 642 DPDDKKEPIDNDNGRVNDPNLFPSLIGSPCSLLLLPPGQPGPLTQE 688
           DPDDKKEPIDNDNGRVNDPNLFPSLIGSPCSLLLLPPGQ GPLTQE
Sbjct: 647 DPDDKKEPIDNDNGRVNDPNLFPSLIGSPCSLLLLPPGQTGPLTQE 692

BLAST of Carg12907 vs. ExPASy Swiss-Prot
Match: Q9MA85 (Pentatricopeptide repeat-containing protein At3g05340 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E83 PE=2 SV=2)

HSP 1 Score: 714.1 bits (1842), Expect = 1.5e-204
Identity = 365/608 (60.03%), Postives = 438/608 (72.04%), Query Frame = 0

Query: 44  SFLLSVCGRHGNL-YLGSSLHASIIKSFELSN------HENGVVIMNSLISMYERCGKLP 103
           S LLS+CGR G   +LG  LHASIIK+ E         H N +V+ NSL+S+Y +CGKL 
Sbjct: 48  SLLLSICGREGWFPHLGPCLHASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAKCGKLV 107

Query: 104 DAVKVFDEMPTRDTVSWNALIGGFMRNGEFYAGFSYFKAMCLVGDCKFDKATLTTILSAC 163
           DA+K+FDEMP RD +S N +  GF+RN E  +GF   K M  +G   FD ATLT +LS C
Sbjct: 108 DAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRM--LGSGGFDHATLTIVLSVC 167

Query: 164 DGAEMYCIIEMMHGLTFLSGYEQEITVGNALISSYFKCGCVGFGKQVFYETEERNVITWT 223
           D  E   + +M+H L  LSGY++EI+VGN LI+SYFKCGC   G+ VF     RNVIT T
Sbjct: 168 DTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLT 227

Query: 224 AVISGLAQNGHHEHSLELFREMMSCGSVEPNSLTYLSLLTACSGLEALEEGCQIHGLILK 283
           AVISGL +N  HE  L LF  +M  G V PNS+TYLS L ACSG + + EG QIH L+ K
Sbjct: 228 AVISGLIENELHEDGLRLF-SLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWK 287

Query: 284 LGIQSDLCIGSALMDMYSKCGSIGDAWKIFELAEELDMVSLTVILAGFTQNGCEEEAIQI 343
            GI+S+LCI SALMDMYSKCGSI DAW IFE   E+D VS+TVIL G  QNG EEEAIQ 
Sbjct: 288 YGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQF 347

Query: 344 FLKMLKMGIEIDENVVSAVLGVFGADTSLRLGQQVHSFIVKKNFSCNPFVSNGLINMYSK 403
           F++ML+ G+EID NVVSAVLGV   D SL LG+Q+HS ++K+ FS N FV+NGLINMYSK
Sbjct: 348 FIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSK 407

Query: 404 CGALDESVKVFDRMQNRNSVTWNSMIAAFARHGDGSKALHLYENMKLEGAKPTDITFLSL 463
           CG L +S  VF RM  RN V+WNSMIAAFARHG G  AL LYE M     KPTD+TFLSL
Sbjct: 408 CGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSL 467

Query: 464 LHACSHVGLVNKGMEFLESMTKDHRMNPRSEHYACVVDMLGRAGLLSEARTFIEKLPEQP 523
           LHACSHVGL++KG E L  M + H + PR+EHY C++DMLGRAGLL EA++FI+ LP +P
Sbjct: 468 LHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKP 527

Query: 524 GLLVWQALLGACSLYGDSEMGKYAAEHLFSETPYSSVPYVLLANIYSSEGNWKERARTIR 583
              +WQALLGACS +GD+E+G+YAAE LF   P SS  ++L+ANIYSS G WKERA+TI+
Sbjct: 528 DCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIK 587

Query: 584 KMKETGMAKETGISWIEIDKKVHSFTVGDKRHPQADIIYGVLMDLFVHMVDEGYVPDKKF 643
           +MK  G+ KETGIS IEI+ K HSF V DK HPQA+ IY VL  LF  MVDEGY PDK+F
Sbjct: 588 RMKAMGVTKETGISSIEIEHKTHSFVVEDKLHPQAEAIYDVLSGLFPVMVDEGYRPDKRF 647

Query: 644 ILFYLDPD 645
           IL Y   D
Sbjct: 648 ILCYTGDD 652

BLAST of Carg12907 vs. ExPASy Swiss-Prot
Match: Q9M1V3 (Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H83 PE=2 SV=2)

HSP 1 Score: 411.0 bits (1055), Expect = 2.7e-113
Identity = 216/639 (33.80%), Postives = 364/639 (56.96%), Query Frame = 0

Query: 23  KPIPSKPICRNLLNIRPQPNPSFL---LSVCGRHGNLYLGSSLHASIIKSFELSNHENGV 82
           K + +  + R +    P PN   +   L+ C       LG  +HAS++KS   S H + +
Sbjct: 264 KSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKS---STHSSEL 323

Query: 83  VIMNSLISMYERCGKLPDAVKVFDEMPTRDTVSWNALIGGFMRNGEFYAGFSYFKAMCLV 142
            + N+LI+MY RCGK+P A ++  +M   D V+WN+LI G+++N  +     +F  M   
Sbjct: 324 YVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAA 383

Query: 143 GDCKFDKATLTTILSACDGAEMYCIIEMMHGLTFLSGYEQEITVGNALISSYFKCGCVGF 202
           G  K D+ ++T+I++A            +H      G++  + VGN LI  Y KC    +
Sbjct: 384 GH-KSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCY 443

Query: 203 GKQVFYETEERNVITWTAVISGLAQNGHHEHSLELFREMMSCGSVEPNSLTYLSLLTACS 262
             + F    ++++I+WT VI+G AQN  H  +LELFR++     +E + +   S+L A S
Sbjct: 444 MGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAK-KRMEIDEMILGSILRASS 503

Query: 263 GLEALEEGCQIHGLILKLGIQSDLCIGSALMDMYSKCGSIGDAWKIFELAEELDMVSLTV 322
            L+++    +IH  IL+ G+  D  I + L+D+Y KC ++G A ++FE  +  D+VS T 
Sbjct: 504 VLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTS 563

Query: 323 ILAGFTQNGCEEEAIQIFLKMLKMGIEIDENVVSAVLGVFGADTSLRLGQQVHSFIVKKN 382
           +++    NG E EA+++F +M++ G+  D   +  +L    + ++L  G+++H ++++K 
Sbjct: 564 MISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKG 623

Query: 383 FSCNPFVSNGLINMYSKCGALDESVKVFDRMQNRNSVTWNSMIAAFARHGDGSKALHLYE 442
           F     ++  +++MY+ CG L  +  VFDR++ +  + + SMI A+  HG G  A+ L++
Sbjct: 624 FCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFD 683

Query: 443 NMKLEGAKPTDITFLSLLHACSHVGLVNKGMEFLESMTKDHRMNPRSEHYACVVDMLGRA 502
            M+ E   P  I+FL+LL+ACSH GL+++G  FL+ M  ++ + P  EHY C+VDMLGRA
Sbjct: 684 KMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRA 743

Query: 503 GLLSEARTFIEKLPEQPGLLVWQALLGACSLYGDSEMGKYAAEHLFSETPYSSVPYVLLA 562
             + EA  F++ +  +P   VW ALL AC  + + E+G+ AA+ L    P +    VL++
Sbjct: 744 NCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVS 803

Query: 563 NIYSSEGNWKERARTIRKMKETGMAKETGISWIEIDKKVHSFTVGDKRHPQADIIYGVLM 622
           N+++ +G W +  +   KMK +GM K  G SWIE+D KVH FT  DK HP++  IY  L 
Sbjct: 804 NVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLS 863

Query: 623 DLFVHMVDE-GYVPDKKFILFYLDPDDKKEPIDNDNGRV 658
           ++   +  E GYV D KF+L  +D  +K + +   + R+
Sbjct: 864 EVTRKLEREVGYVADTKFVLHNVDEGEKVQMLHGHSERI 896

BLAST of Carg12907 vs. ExPASy Swiss-Prot
Match: Q9FIB2 (Putative pentatricopeptide repeat-containing protein At5g09950 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H35 PE=3 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 3.3e-111
Identity = 216/575 (37.57%), Postives = 337/575 (58.61%), Query Frame = 0

Query: 79  VVIMNSLISMYERCGKLPDAVKVFDEMPTRDTVSWNALIGGFMRNGEFYAGFSYFKAMCL 138
           V I N L++MY +CG + DA +VF  M  +D+VSWN++I G  +NG F      +K+M  
Sbjct: 349 VGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSM-R 408

Query: 139 VGDCKFDKATLTTILSACDGAEMYCIIEMMHGLTFLSGYEQEITVGNALISSYFKCGCVG 198
             D      TL + LS+C   +   + + +HG +   G +  ++V NAL++ Y + G + 
Sbjct: 409 RHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLN 468

Query: 199 FGKQVFYETEERNVITWTAVISGLAQNGHH-EHSLELFREMMSCGSVEPNSLTYLSLLTA 258
             +++F    E + ++W ++I  LA++      ++  F      G  + N +T+ S+L+A
Sbjct: 469 ECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQ-KLNRITFSSVLSA 528

Query: 259 CSGLEALEEGCQIHGLILKLGIQSDLCIGSALMDMYSKCGSIGDAWKIF-ELAEELDMVS 318
            S L   E G QIHGL LK  I  +    +AL+  Y KCG +    KIF  +AE  D V+
Sbjct: 529 VSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVT 588

Query: 319 LTVILAGFTQNGCEEEAIQIFLKMLKMGIEIDENVVSAVLGVFGADTSLRLGQQVHSFIV 378
              +++G+  N    +A+ +   ML+ G  +D  + + VL  F +  +L  G +VH+  V
Sbjct: 589 WNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSV 648

Query: 379 KKNFSCNPFVSNGLINMYSKCGALDESVKVFDRMQNRNSVTWNSMIAAFARHGDGSKALH 438
           +     +  V + L++MYSKCG LD +++ F+ M  RNS +WNSMI+ +ARHG G +AL 
Sbjct: 649 RACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALK 708

Query: 439 LYENMKLEGAKPTD-ITFLSLLHACSHVGLVNKGMEFLESMTKDHRMNPRSEHYACVVDM 498
           L+E MKL+G  P D +TF+ +L ACSH GL+ +G +  ESM+  + + PR EH++C+ D+
Sbjct: 709 LFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADV 768

Query: 499 LGRAGLLSEARTFIEKLPEQPGLLVWQALLGACSLYG--DSEMGKYAAEHLFSETPYSSV 558
           LGRAG L +   FIEK+P +P +L+W+ +LGAC       +E+GK AAE LF   P ++V
Sbjct: 769 LGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAV 828

Query: 559 PYVLLANIYSSEGNWKERARTIRKMKETGMAKETGISWIEIDKKVHSFTVGDKRHPQADI 618
            YVLL N+Y++ G W++  +  +KMK+  + KE G SW+ +   VH F  GDK HP AD+
Sbjct: 829 NYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADV 888

Query: 619 IYGVLMDLFVHMVDEGYVPDKKFILFYLDPDDKKE 649
           IY  L +L   M D GYVP   F L+ L+ ++K+E
Sbjct: 889 IYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEE 921

BLAST of Carg12907 vs. ExPASy Swiss-Prot
Match: Q9SVP7 (Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H42 PE=2 SV=2)

HSP 1 Score: 399.4 bits (1025), Expect = 8.2e-110
Identity = 211/619 (34.09%), Postives = 348/619 (56.22%), Query Frame = 0

Query: 33  NLLNIRPQPNP-SFLLSVCGRHGNLYLGSSLHASIIKSFELSNHENGVVIMNSLISMYER 92
           +L  + P  N  + L+  C   G L+ G  LHA   K    SN++    I  +L+++Y +
Sbjct: 381 HLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNK----IEGALLNLYAK 440

Query: 93  CGKLPDAVKVFDEMPTRDTVSWNALIGGFMRNGEFYAGFSYFKAMCLVGDCKFDKATLTT 152
           C  +  A+  F E    + V WN ++  +    +    F  F+ M  + +   ++ T  +
Sbjct: 441 CADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQM-QIEEIVPNQYTYPS 500

Query: 153 ILSACDGAEMYCIIEMMHGLTFLSGYEQEITVGNALISSYFKCGCVGFGKQVFYETEERN 212
           IL  C       + E +H     + ++    V + LI  Y K G +     +      ++
Sbjct: 501 ILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKD 560

Query: 213 VITWTAVISGLAQNGHHEHSLELFREMMSCGSVEPNSLTYLSLLTACSGLEALEEGCQIH 272
           V++WT +I+G  Q    + +L  FR+M+  G +  + +   + ++AC+GL+AL+EG QIH
Sbjct: 561 VVSWTTMIAGYTQYNFDDKALTTFRQMLDRG-IRSDEVGLTNAVSACAGLQALKEGQQIH 620

Query: 273 GLILKLGIQSDLCIGSALMDMYSKCGSIGDAWKIFELAEELDMVSLTVILAGFTQNGCEE 332
                 G  SDL   +AL+ +YS+CG I +++  FE  E  D ++   +++GF Q+G  E
Sbjct: 621 AQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNE 680

Query: 333 EAIQIFLKMLKMGIEIDENVVSAVLGVFGADTSLRLGQQVHSFIVKKNFSCNPFVSNGLI 392
           EA+++F++M + GI+ +     + +       +++ G+QVH+ I K  +     V N LI
Sbjct: 681 EALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALI 740

Query: 393 NMYSKCGALDESVKVFDRMQNRNSVTWNSMIAAFARHGDGSKALHLYENMKLEGAKPTDI 452
           +MY+KCG++ ++ K F  +  +N V+WN++I A+++HG GS+AL  ++ M     +P  +
Sbjct: 741 SMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHV 800

Query: 453 TFLSLLHACSHVGLVNKGMEFLESMTKDHRMNPRSEHYACVVDMLGRAGLLSEARTFIEK 512
           T + +L ACSH+GLV+KG+ + ESM  ++ ++P+ EHY CVVDML RAGLLS A+ FI++
Sbjct: 801 TLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQE 860

Query: 513 LPEQPGLLVWQALLGACSLYGDSEMGKYAAEHLFSETPYSSVPYVLLANIYSSEGNWKER 572
           +P +P  LVW+ LL AC ++ + E+G++AA HL    P  S  YVLL+N+Y+    W  R
Sbjct: 861 MPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDAR 920

Query: 573 ARTIRKMKETGMAKETGISWIEIDKKVHSFTVGDKRHPQADIIYGVLMDLFVHMVDEGYV 632
             T +KMKE G+ KE G SWIE+   +HSF VGD+ HP AD I+    DL     + GYV
Sbjct: 921 DLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYV 980

Query: 633 PDKKFILFYLDPDDKKEPI 651
            D   +L  L   ++K+PI
Sbjct: 981 QDCFSLLNELQ-HEQKDPI 992

BLAST of Carg12907 vs. ExPASy Swiss-Prot
Match: Q5G1T1 (Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB2261 PE=2 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 4.5e-108
Identity = 212/575 (36.87%), Postives = 327/575 (56.87%), Query Frame = 0

Query: 76  ENGVVIMNSLISMYERC-GKLPDAVKVFDEMPTRDTVSWNALIGGFMRNGEFYAGFSYFK 135
           E+ V +  SLI M+ +      +A KVFD+M   + V+W  +I   M+ G       +F 
Sbjct: 199 ESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFL 258

Query: 136 AMCLVGDCKFDKATLTTILSACDGAEMYCIIEMMHGLTFLSGYEQEITVGNALISSYFKC 195
            M L G  + DK TL+++ SAC   E   + + +H     SG   ++    +L+  Y KC
Sbjct: 259 DMVLSG-FESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKC 318

Query: 196 ---GCVGFGKQVFYETEERNVITWTAVISGLAQNGH-HEHSLELFREMMSCGSVEPNSLT 255
              G V   ++VF   E+ +V++WTA+I+G  +N +    ++ LF EM++ G VEPN  T
Sbjct: 319 SADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFT 378

Query: 256 YLSLLTACSGLEALEEGCQIHGLILKLGIQSDLCIGSALMDMYSKCGSIGDAWKIFELAE 315
           + S   AC  L     G Q+ G   K G+ S+  + ++++ M+ K   + DA + FE   
Sbjct: 379 FSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLS 438

Query: 316 ELDMVSLTVILAGFTQNGCEEEAIQIFLKMLKMGIEIDENVVSAVLGVFGADTSLRLGQQ 375
           E ++VS    L G  +N   E+A ++  ++ +  + +     +++L       S+R G+Q
Sbjct: 439 EKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQ 498

Query: 376 VHSFIVKKNFSCNPFVSNGLINMYSKCGALDESVKVFDRMQNRNSVTWNSMIAAFARHGD 435
           +HS +VK   SCN  V N LI+MYSKCG++D + +VF+ M+NRN ++W SMI  FA+HG 
Sbjct: 499 IHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGF 558

Query: 436 GSKALHLYENMKLEGAKPTDITFLSLLHACSHVGLVNKGMEFLESMTKDHRMNPRSEHYA 495
             + L  +  M  EG KP ++T++++L ACSHVGLV++G     SM +DH++ P+ EHYA
Sbjct: 559 AIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYA 618

Query: 496 CVVDMLGRAGLLSEARTFIEKLPEQPGLLVWQALLGACSLYGDSEMGKYAAEHLFSETPY 555
           C+VD+L RAGLL++A  FI  +P Q  +LVW+  LGAC ++ ++E+GK AA  +    P 
Sbjct: 619 CMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPN 678

Query: 556 SSVPYVLLANIYSSEGNWKERARTIRKMKETGMAKETGISWIEIDKKVHSFTVGDKRHPQ 615
               Y+ L+NIY+  G W+E     RKMKE  + KE G SWIE+  K+H F VGD  HP 
Sbjct: 679 EPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPN 738

Query: 616 ADIIYGVLMDLFVHMVDEGYVPDKKFILFYLDPDD 646
           A  IY  L  L   +   GYVPD   +L  L+ ++
Sbjct: 739 AHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEEN 770

BLAST of Carg12907 vs. ExPASy TrEMBL
Match: A0A6J1G3C0 (pentatricopeptide repeat-containing protein At3g05340 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111450393 PE=3 SV=1)

HSP 1 Score: 1287.7 bits (3331), Expect = 0.0e+00
Identity = 631/646 (97.68%), Postives = 637/646 (98.61%), Query Frame = 0

Query: 42  NPSFLLSVCGRHGNLYLGSSLHASIIKSFELSNHENGVVIMNSLISMYERCGKLPDAVKV 101
           +PSFLLSVCGR G+LYLGSSLHASIIKSFELSNHENGVVIMNSLISMYERCGKLPDAVKV
Sbjct: 47  DPSFLLSVCGRDGHLYLGSSLHASIIKSFELSNHENGVVIMNSLISMYERCGKLPDAVKV 106

Query: 102 FDEMPTRDTVSWNALIGGFMRNGEFYAGFSYFKAMCLVGDCKFDKATLTTILSACDGAEM 161
           FDEMPTRDTVSWNALIGGFMRNGEF AGFSYFKAMCLVGDCKFDKATLTTILSACDG EM
Sbjct: 107 FDEMPTRDTVSWNALIGGFMRNGEFCAGFSYFKAMCLVGDCKFDKATLTTILSACDGLEM 166

Query: 162 YCIIEMMHGLTFLSGYEQEITVGNALISSYFKCGCVGFGKQVFYETEERNVITWTAVISG 221
            CII+MMHGLTFLSGY+QEITVGNALISSYFKCGCVGFGKQVFYE EERNVITWTAVISG
Sbjct: 167 CCIIKMMHGLTFLSGYKQEITVGNALISSYFKCGCVGFGKQVFYEMEERNVITWTAVISG 226

Query: 222 LAQNGHHEHSLELFREMMSCGSVEPNSLTYLSLLTACSGLEALEEGCQIHGLILKLGIQS 281
           LAQNG+HEHSLELFREM+SCGSVEPNSLTYLSLLTACSGLEALEEGCQIHGLILKLGIQS
Sbjct: 227 LAQNGYHEHSLELFREMLSCGSVEPNSLTYLSLLTACSGLEALEEGCQIHGLILKLGIQS 286

Query: 282 DLCIGSALMDMYSKCGSIGDAWKIFELAEELDMVSLTVILAGFTQNGCEEEAIQIFLKML 341
           DLCIGSALMDMYSKCGSIGDAWKIFE AEELDMVSLTVILAGFTQNGCEEEAIQIFLKML
Sbjct: 287 DLCIGSALMDMYSKCGSIGDAWKIFESAEELDMVSLTVILAGFTQNGCEEEAIQIFLKML 346

Query: 342 KMGIEIDENVVSAVLGVFGADTSLRLGQQVHSFIVKKNFSCNPFVSNGLINMYSKCGALD 401
           KMGIEIDENVVSAVLGVFGADTSLRLGQQVHSFIVKKNFSCNPFVSNGLINMYSKCGALD
Sbjct: 347 KMGIEIDENVVSAVLGVFGADTSLRLGQQVHSFIVKKNFSCNPFVSNGLINMYSKCGALD 406

Query: 402 ESVKVFDRMQNRNSVTWNSMIAAFARHGDGSKALHLYENMKLEGAKPTDITFLSLLHACS 461
           ESVKVFDRMQNRNSVTWNSMIAAFARHGDG KALHLYENMKLEGAKPTDITFLSLLHACS
Sbjct: 407 ESVKVFDRMQNRNSVTWNSMIAAFARHGDGLKALHLYENMKLEGAKPTDITFLSLLHACS 466

Query: 462 HVGLVNKGMEFLESMTKDHRMNPRSEHYACVVDMLGRAGLLSEARTFIEKLPEQPGLLVW 521
           HVGLVNKGMEFLESMTKDHRMNPRSEHYACVVDMLGRAGLLSEARTFIEKLPEQPGLLVW
Sbjct: 467 HVGLVNKGMEFLESMTKDHRMNPRSEHYACVVDMLGRAGLLSEARTFIEKLPEQPGLLVW 526

Query: 522 QALLGACSLYGDSEMGKYAAEHLFSETPYSSVPYVLLANIYSSEGNWKERARTIRKMKET 581
           QALLGACSLYGDSEMGKYAAEHLFSETP SSVPYVLLANIYSSEGNWKERARTIRKMKET
Sbjct: 527 QALLGACSLYGDSEMGKYAAEHLFSETPNSSVPYVLLANIYSSEGNWKERARTIRKMKET 586

Query: 582 GMAKETGISWIEIDKKVHSFTVGDKRHPQADIIYGVLMDLFVHMVDEGYVPDKKFILFYL 641
           GMAKETGISWIEIDKKVHSFTVGDKRHPQADIIYGVLMDLFVHMVDEGYVPDKKFILFYL
Sbjct: 587 GMAKETGISWIEIDKKVHSFTVGDKRHPQADIIYGVLMDLFVHMVDEGYVPDKKFILFYL 646

Query: 642 DPDDKKEPIDNDNGRVNDPNLFPSLIGSPCSLLLLPPGQPGPLTQE 688
           DPDDKKEPIDNDNGRVNDPNLFPSLIGSPCSLLLLPPGQ GPLTQE
Sbjct: 647 DPDDKKEPIDNDNGRVNDPNLFPSLIGSPCSLLLLPPGQTGPLTQE 692

BLAST of Carg12907 vs. ExPASy TrEMBL
Match: A0A6J1KFW9 (pentatricopeptide repeat-containing protein At3g05340 OS=Cucurbita maxima OX=3661 GN=LOC111493539 PE=3 SV=1)

HSP 1 Score: 1273.8 bits (3295), Expect = 0.0e+00
Identity = 624/643 (97.05%), Postives = 631/643 (98.13%), Query Frame = 0

Query: 42  NPSFLLSVCGRHGNLYLGSSLHASIIKSFELSNHENGVVIMNSLISMYERCGKLPDAVKV 101
           +PSFLLSVCGR G+LYLGSSLHASIIKSFELSNHENGVVIMNSLISMYERCGKLPDAVKV
Sbjct: 47  DPSFLLSVCGRDGHLYLGSSLHASIIKSFELSNHENGVVIMNSLISMYERCGKLPDAVKV 106

Query: 102 FDEMPTRDTVSWNALIGGFMRNGEFYAGFSYFKAMCLVGDCKFDKATLTTILSACDGAEM 161
           FDEMPTRDTVSWNALIGGFMRNGEFYAGFSYFKAMCLVGDCKFDKATLTTILSACDG+EM
Sbjct: 107 FDEMPTRDTVSWNALIGGFMRNGEFYAGFSYFKAMCLVGDCKFDKATLTTILSACDGSEM 166

Query: 162 YCIIEMMHGLTFLSGYEQEITVGNALISSYFKCGCVGFGKQVFYETEERNVITWTAVISG 221
            CIIEMMHGLTFLSGYEQEITVGNALISSYFKCGCVGFG+Q+FYE EERNVITWTAVISG
Sbjct: 167 CCIIEMMHGLTFLSGYEQEITVGNALISSYFKCGCVGFGRQLFYEMEERNVITWTAVISG 226

Query: 222 LAQNGHHEHSLELFREMMSCGSVEPNSLTYLSLLTACSGLEALEEGCQIHGLILKLGIQS 281
           LAQNGHHEHSLELFREMMSCGSVEPNSLTYLSLLTACSGLEALEEGCQIHGLILKLGIQS
Sbjct: 227 LAQNGHHEHSLELFREMMSCGSVEPNSLTYLSLLTACSGLEALEEGCQIHGLILKLGIQS 286

Query: 282 DLCIGSALMDMYSKCGSIGDAWKIFELAEELDMVSLTVILAGFTQNGCEEEAIQIFLKML 341
           DLCIGSALMDMYSKCGSIGDAWKIFE AEELDMVSLTVILAGFTQNGCEEEAIQIFLKML
Sbjct: 287 DLCIGSALMDMYSKCGSIGDAWKIFESAEELDMVSLTVILAGFTQNGCEEEAIQIFLKML 346

Query: 342 KMGIEIDENVVSAVLGVFGADTSLRLGQQVHSFIVKKNFSCNPFVSNGLINMYSKCGALD 401
           KMGIEID NVVSAVLGVFGADTSLRLGQQVHSFIVKKNFSCNPFVSNGLINMYSKCGALD
Sbjct: 347 KMGIEIDANVVSAVLGVFGADTSLRLGQQVHSFIVKKNFSCNPFVSNGLINMYSKCGALD 406

Query: 402 ESVKVFDRMQNRNSVTWNSMIAAFARHGDGSKALHLYENMKLEGAKPTDITFLSLLHACS 461
           ESVKVFDRMQNRNSVTWNSMIAAFARHGDGSKALHLYENMKLEGAKPTDITFLSLLHACS
Sbjct: 407 ESVKVFDRMQNRNSVTWNSMIAAFARHGDGSKALHLYENMKLEGAKPTDITFLSLLHACS 466

Query: 462 HVGLVNKGMEFLESMTKDHRMNPRSEHYACVVDMLGRAGLLSEARTFIEKLPEQPGLLVW 521
           HVGLVNKGMEFLESMTKDHRMNPRSEHYACVVDMLGRAGLLSEARTFIEKLPEQPGLLVW
Sbjct: 467 HVGLVNKGMEFLESMTKDHRMNPRSEHYACVVDMLGRAGLLSEARTFIEKLPEQPGLLVW 526

Query: 522 QALLGACSLYGDSEMGKYAAEHLFSETPYSSVPYVLLANIYSSEGNWKERARTIRKMKET 581
           QALLGACSLYGDSEMGKYAAEHLFSETPYSSVPYVLLANIYSSEGNWKERARTIRKMKET
Sbjct: 527 QALLGACSLYGDSEMGKYAAEHLFSETPYSSVPYVLLANIYSSEGNWKERARTIRKMKET 586

Query: 582 GMAKETGISWIEIDKKVHSFTVGDKRHPQADIIYGVLMDLFVHMVDEGYVPDKKFILFYL 641
           GMAKETGISWIEIDKKVHSFTVGDKRHPQADIIYGVLMDLFV MVDEGYVPDK FILFYL
Sbjct: 587 GMAKETGISWIEIDKKVHSFTVGDKRHPQADIIYGVLMDLFVLMVDEGYVPDKNFILFYL 646

Query: 642 DPDDKKEPIDNDNGRVNDPNLFPSLIGSPCSLLLLPPGQPGPL 685
           DPDDKKEPIDNDNG +NDPNLF SL+  PCSLLLLPPGQPG L
Sbjct: 647 DPDDKKEPIDNDNGPINDPNLFLSLVCFPCSLLLLPPGQPGHL 689

BLAST of Carg12907 vs. ExPASy TrEMBL
Match: A0A6J1G350 (pentatricopeptide repeat-containing protein At3g05340 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111450393 PE=3 SV=1)

HSP 1 Score: 1248.0 bits (3228), Expect = 0.0e+00
Identity = 611/626 (97.60%), Postives = 618/626 (98.72%), Query Frame = 0

Query: 42  NPSFLLSVCGRHGNLYLGSSLHASIIKSFELSNHENGVVIMNSLISMYERCGKLPDAVKV 101
           +PSFLLSVCGR G+LYLGSSLHASIIKSFELSNHENGVVIMNSLISMYERCGKLPDAVKV
Sbjct: 47  DPSFLLSVCGRDGHLYLGSSLHASIIKSFELSNHENGVVIMNSLISMYERCGKLPDAVKV 106

Query: 102 FDEMPTRDTVSWNALIGGFMRNGEFYAGFSYFKAMCLVGDCKFDKATLTTILSACDGAEM 161
           FDEMPTRDTVSWNALIGGFMRNGEF AGFSYFKAMCLVGDCKFDKATLTTILSACDG EM
Sbjct: 107 FDEMPTRDTVSWNALIGGFMRNGEFCAGFSYFKAMCLVGDCKFDKATLTTILSACDGLEM 166

Query: 162 YCIIEMMHGLTFLSGYEQEITVGNALISSYFKCGCVGFGKQVFYETEERNVITWTAVISG 221
            CII+MMHGLTFLSGY+QEITVGNALISSYFKCGCVGFGKQVFYE EERNVITWTAVISG
Sbjct: 167 CCIIKMMHGLTFLSGYKQEITVGNALISSYFKCGCVGFGKQVFYEMEERNVITWTAVISG 226

Query: 222 LAQNGHHEHSLELFREMMSCGSVEPNSLTYLSLLTACSGLEALEEGCQIHGLILKLGIQS 281
           LAQNG+HEHSLELFREM+SCGSVEPNSLTYLSLLTACSGLEALEEGCQIHGLILKLGIQS
Sbjct: 227 LAQNGYHEHSLELFREMLSCGSVEPNSLTYLSLLTACSGLEALEEGCQIHGLILKLGIQS 286

Query: 282 DLCIGSALMDMYSKCGSIGDAWKIFELAEELDMVSLTVILAGFTQNGCEEEAIQIFLKML 341
           DLCIGSALMDMYSKCGSIGDAWKIFE AEELDMVSLTVILAGFTQNGCEEEAIQIFLKML
Sbjct: 287 DLCIGSALMDMYSKCGSIGDAWKIFESAEELDMVSLTVILAGFTQNGCEEEAIQIFLKML 346

Query: 342 KMGIEIDENVVSAVLGVFGADTSLRLGQQVHSFIVKKNFSCNPFVSNGLINMYSKCGALD 401
           KMGIEIDENVVSAVLGVFGADTSLRLGQQVHSFIVKKNFSCNPFVSNGLINMYSKCGALD
Sbjct: 347 KMGIEIDENVVSAVLGVFGADTSLRLGQQVHSFIVKKNFSCNPFVSNGLINMYSKCGALD 406

Query: 402 ESVKVFDRMQNRNSVTWNSMIAAFARHGDGSKALHLYENMKLEGAKPTDITFLSLLHACS 461
           ESVKVFDRMQNRNSVTWNSMIAAFARHGDG KALHLYENMKLEGAKPTDITFLSLLHACS
Sbjct: 407 ESVKVFDRMQNRNSVTWNSMIAAFARHGDGLKALHLYENMKLEGAKPTDITFLSLLHACS 466

Query: 462 HVGLVNKGMEFLESMTKDHRMNPRSEHYACVVDMLGRAGLLSEARTFIEKLPEQPGLLVW 521
           HVGLVNKGMEFLESMTKDHRMNPRSEHYACVVDMLGRAGLLSEARTFIEKLPEQPGLLVW
Sbjct: 467 HVGLVNKGMEFLESMTKDHRMNPRSEHYACVVDMLGRAGLLSEARTFIEKLPEQPGLLVW 526

Query: 522 QALLGACSLYGDSEMGKYAAEHLFSETPYSSVPYVLLANIYSSEGNWKERARTIRKMKET 581
           QALLGACSLYGDSEMGKYAAEHLFSETP SSVPYVLLANIYSSEGNWKERARTIRKMKET
Sbjct: 527 QALLGACSLYGDSEMGKYAAEHLFSETPNSSVPYVLLANIYSSEGNWKERARTIRKMKET 586

Query: 582 GMAKETGISWIEIDKKVHSFTVGDKRHPQADIIYGVLMDLFVHMVDEGYVPDKKFILFYL 641
           GMAKETGISWIEIDKKVHSFTVGDKRHPQADIIYGVLMDLFVHMVDEGYVPDKKFILFYL
Sbjct: 587 GMAKETGISWIEIDKKVHSFTVGDKRHPQADIIYGVLMDLFVHMVDEGYVPDKKFILFYL 646

Query: 642 DPDDKKEPIDNDNGRVNDPNLFPSLI 668
           DPDDKKEPIDNDNGRVNDPNLFPSL+
Sbjct: 647 DPDDKKEPIDNDNGRVNDPNLFPSLV 672

BLAST of Carg12907 vs. ExPASy TrEMBL
Match: A0A6J1G3A2 (pentatricopeptide repeat-containing protein At3g05340 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111450393 PE=3 SV=1)

HSP 1 Score: 1246.9 bits (3225), Expect = 0.0e+00
Identity = 611/625 (97.76%), Postives = 617/625 (98.72%), Query Frame = 0

Query: 42  NPSFLLSVCGRHGNLYLGSSLHASIIKSFELSNHENGVVIMNSLISMYERCGKLPDAVKV 101
           +PSFLLSVCGR G+LYLGSSLHASIIKSFELSNHENGVVIMNSLISMYERCGKLPDAVKV
Sbjct: 47  DPSFLLSVCGRDGHLYLGSSLHASIIKSFELSNHENGVVIMNSLISMYERCGKLPDAVKV 106

Query: 102 FDEMPTRDTVSWNALIGGFMRNGEFYAGFSYFKAMCLVGDCKFDKATLTTILSACDGAEM 161
           FDEMPTRDTVSWNALIGGFMRNGEF AGFSYFKAMCLVGDCKFDKATLTTILSACDG EM
Sbjct: 107 FDEMPTRDTVSWNALIGGFMRNGEFCAGFSYFKAMCLVGDCKFDKATLTTILSACDGLEM 166

Query: 162 YCIIEMMHGLTFLSGYEQEITVGNALISSYFKCGCVGFGKQVFYETEERNVITWTAVISG 221
            CII+MMHGLTFLSGY+QEITVGNALISSYFKCGCVGFGKQVFYE EERNVITWTAVISG
Sbjct: 167 CCIIKMMHGLTFLSGYKQEITVGNALISSYFKCGCVGFGKQVFYEMEERNVITWTAVISG 226

Query: 222 LAQNGHHEHSLELFREMMSCGSVEPNSLTYLSLLTACSGLEALEEGCQIHGLILKLGIQS 281
           LAQNG+HEHSLELFREM+SCGSVEPNSLTYLSLLTACSGLEALEEGCQIHGLILKLGIQS
Sbjct: 227 LAQNGYHEHSLELFREMLSCGSVEPNSLTYLSLLTACSGLEALEEGCQIHGLILKLGIQS 286

Query: 282 DLCIGSALMDMYSKCGSIGDAWKIFELAEELDMVSLTVILAGFTQNGCEEEAIQIFLKML 341
           DLCIGSALMDMYSKCGSIGDAWKIFE AEELDMVSLTVILAGFTQNGCEEEAIQIFLKML
Sbjct: 287 DLCIGSALMDMYSKCGSIGDAWKIFESAEELDMVSLTVILAGFTQNGCEEEAIQIFLKML 346

Query: 342 KMGIEIDENVVSAVLGVFGADTSLRLGQQVHSFIVKKNFSCNPFVSNGLINMYSKCGALD 401
           KMGIEIDENVVSAVLGVFGADTSLRLGQQVHSFIVKKNFSCNPFVSNGLINMYSKCGALD
Sbjct: 347 KMGIEIDENVVSAVLGVFGADTSLRLGQQVHSFIVKKNFSCNPFVSNGLINMYSKCGALD 406

Query: 402 ESVKVFDRMQNRNSVTWNSMIAAFARHGDGSKALHLYENMKLEGAKPTDITFLSLLHACS 461
           ESVKVFDRMQNRNSVTWNSMIAAFARHGDG KALHLYENMKLEGAKPTDITFLSLLHACS
Sbjct: 407 ESVKVFDRMQNRNSVTWNSMIAAFARHGDGLKALHLYENMKLEGAKPTDITFLSLLHACS 466

Query: 462 HVGLVNKGMEFLESMTKDHRMNPRSEHYACVVDMLGRAGLLSEARTFIEKLPEQPGLLVW 521
           HVGLVNKGMEFLESMTKDHRMNPRSEHYACVVDMLGRAGLLSEARTFIEKLPEQPGLLVW
Sbjct: 467 HVGLVNKGMEFLESMTKDHRMNPRSEHYACVVDMLGRAGLLSEARTFIEKLPEQPGLLVW 526

Query: 522 QALLGACSLYGDSEMGKYAAEHLFSETPYSSVPYVLLANIYSSEGNWKERARTIRKMKET 581
           QALLGACSLYGDSEMGKYAAEHLFSETP SSVPYVLLANIYSSEGNWKERARTIRKMKET
Sbjct: 527 QALLGACSLYGDSEMGKYAAEHLFSETPNSSVPYVLLANIYSSEGNWKERARTIRKMKET 586

Query: 582 GMAKETGISWIEIDKKVHSFTVGDKRHPQADIIYGVLMDLFVHMVDEGYVPDKKFILFYL 641
           GMAKETGISWIEIDKKVHSFTVGDKRHPQADIIYGVLMDLFVHMVDEGYVPDKKFILFYL
Sbjct: 587 GMAKETGISWIEIDKKVHSFTVGDKRHPQADIIYGVLMDLFVHMVDEGYVPDKKFILFYL 646

Query: 642 DPDDKKEPIDNDNGRVNDPNLFPSL 667
           DPDDKKEPIDNDNGRVNDPNLFPSL
Sbjct: 647 DPDDKKEPIDNDNGRVNDPNLFPSL 671

BLAST of Carg12907 vs. ExPASy TrEMBL
Match: A0A1S4E0D4 (pentatricopeptide repeat-containing protein At3g05340 OS=Cucumis melo OX=3656 GN=LOC103494955 PE=3 SV=1)

HSP 1 Score: 1108.2 bits (2865), Expect = 0.0e+00
Identity = 544/623 (87.32%), Postives = 579/623 (92.94%), Query Frame = 0

Query: 44  SFLLSVCGRHGNLYLGSSLHASIIKSFELSNHENGVVIMNSLISMYERCGKLPDAVKVFD 103
           SFLLS+CGR GNL+LGSSLHASIIKSFE SNH NGVVIMNSLISMY+RCGKL DAVKVFD
Sbjct: 49  SFLLSICGREGNLHLGSSLHASIIKSFEPSNHYNGVVIMNSLISMYDRCGKLSDAVKVFD 108

Query: 104 EMPTRDTVSWNALIGGFMRNGEFYAGFSYFKAMCLVGDCKFDKATLTTILSACDGAEMYC 163
           EM TRDT+SWNALIGGF+RNG+F+AGFSYFKAMCLVGDCKFDKATLTTILSACDG E  C
Sbjct: 109 EMLTRDTISWNALIGGFVRNGKFFAGFSYFKAMCLVGDCKFDKATLTTILSACDGLEFCC 168

Query: 164 IIEMMHGLTFLSGYEQEITVGNALISSYFKCGCVGFGKQVFYETEERNVITWTAVISGLA 223
           II+MMHGL FLSG+ QEITVGNAL+SSY KCGCVG G QVF E  ERNVITWTAVISGLA
Sbjct: 169 IIKMMHGLAFLSGFGQEITVGNALVSSYLKCGCVGLGMQVFDEMGERNVITWTAVISGLA 228

Query: 224 QNGHHEHSLELFREMMSCGSVEPNSLTYLSLLTACSGLEALEEGCQIHGLILKLGIQSDL 283
           +NGHHEHSL+LF+EMMS GSVEPNSLTYLSLLTACSGLEAL+EGCQIHGLILKLGIQSDL
Sbjct: 229 RNGHHEHSLKLFKEMMSYGSVEPNSLTYLSLLTACSGLEALKEGCQIHGLILKLGIQSDL 288

Query: 284 CIGSALMDMYSKCGSIGDAWKIFELAEELDMVSLTVILAGFTQNGCEEEAIQIFLKMLKM 343
           CIGSALMDMYSK G IG+AWKIFE AEELDMVSLTVILAGFTQNGCEEEAIQIFLKMLKM
Sbjct: 289 CIGSALMDMYSKSGRIGEAWKIFESAEELDMVSLTVILAGFTQNGCEEEAIQIFLKMLKM 348

Query: 344 GIEIDENVVSAVLGVFGADTSLRLGQQVHSFIVKKNFSCNPFVSNGLINMYSKCGALDES 403
           GIEID NVVS VLGVFGADTSLRLGQQVHSF+VKKNF CNPFVSNGLINMYSKCGALDES
Sbjct: 349 GIEIDGNVVSVVLGVFGADTSLRLGQQVHSFVVKKNFICNPFVSNGLINMYSKCGALDES 408

Query: 404 VKVFDRMQNRNSVTWNSMIAAFARHGDGSKALHLYENMKLEGAKPTDITFLSLLHACSHV 463
           +KVFDRM+ RNSVTWNSMIAAFARHGD SKAL LYENM+LEGAKPTD+TFLSLLHACSH 
Sbjct: 409 MKVFDRMRERNSVTWNSMIAAFARHGDASKALQLYENMQLEGAKPTDVTFLSLLHACSHA 468

Query: 464 GLVNKGMEFLESMTKDHRMNPRSEHYACVVDMLGRAGLLSEARTFIEKLPEQPGLLVWQA 523
           GLV KGMEFL+SMTKDH MNPRSEHYACVVDMLGRAG+LSEAR FIEKLPEQPGLLVWQA
Sbjct: 469 GLVKKGMEFLKSMTKDHGMNPRSEHYACVVDMLGRAGMLSEARNFIEKLPEQPGLLVWQA 528

Query: 524 LLGACSLYGDSEMGKYAAEHLFSETPYSSVPYVLLANIYSSEGNWKERARTIRKMKETGM 583
           LLGACSLYGDSEMGKYAA+HLF ETP+S+VPYVLLANIYSSEGNWKERARTIR+MKE G 
Sbjct: 529 LLGACSLYGDSEMGKYAADHLFLETPHSTVPYVLLANIYSSEGNWKERARTIRRMKEVGT 588

Query: 584 AKETGISWIEIDKKVHSFTVGDKRHPQADIIYGVLMDLFVHMVDEGYVPDKKFILFYLDP 643
           AKETGISWIEIDKKVHSFTVGDK HPQ +IIYGVL +LFV MVDEGYVPDKKFIL+YLD 
Sbjct: 589 AKETGISWIEIDKKVHSFTVGDKMHPQTEIIYGVLTELFVLMVDEGYVPDKKFILYYLD- 648

Query: 644 DDKKEPIDNDNGRVNDPNLFPSL 667
           DD+++PI ND+   ND + FPS+
Sbjct: 649 DDRRDPIHNDH---NDTSNFPSI 667

BLAST of Carg12907 vs. TAIR 10
Match: AT3G05340.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 714.1 bits (1842), Expect = 1.1e-205
Identity = 365/608 (60.03%), Postives = 438/608 (72.04%), Query Frame = 0

Query: 44  SFLLSVCGRHGNL-YLGSSLHASIIKSFELSN------HENGVVIMNSLISMYERCGKLP 103
           S LLS+CGR G   +LG  LHASIIK+ E         H N +V+ NSL+S+Y +CGKL 
Sbjct: 48  SLLLSICGREGWFPHLGPCLHASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAKCGKLV 107

Query: 104 DAVKVFDEMPTRDTVSWNALIGGFMRNGEFYAGFSYFKAMCLVGDCKFDKATLTTILSAC 163
           DA+K+FDEMP RD +S N +  GF+RN E  +GF   K M  +G   FD ATLT +LS C
Sbjct: 108 DAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRM--LGSGGFDHATLTIVLSVC 167

Query: 164 DGAEMYCIIEMMHGLTFLSGYEQEITVGNALISSYFKCGCVGFGKQVFYETEERNVITWT 223
           D  E   + +M+H L  LSGY++EI+VGN LI+SYFKCGC   G+ VF     RNVIT T
Sbjct: 168 DTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLT 227

Query: 224 AVISGLAQNGHHEHSLELFREMMSCGSVEPNSLTYLSLLTACSGLEALEEGCQIHGLILK 283
           AVISGL +N  HE  L LF  +M  G V PNS+TYLS L ACSG + + EG QIH L+ K
Sbjct: 228 AVISGLIENELHEDGLRLF-SLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWK 287

Query: 284 LGIQSDLCIGSALMDMYSKCGSIGDAWKIFELAEELDMVSLTVILAGFTQNGCEEEAIQI 343
            GI+S+LCI SALMDMYSKCGSI DAW IFE   E+D VS+TVIL G  QNG EEEAIQ 
Sbjct: 288 YGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQF 347

Query: 344 FLKMLKMGIEIDENVVSAVLGVFGADTSLRLGQQVHSFIVKKNFSCNPFVSNGLINMYSK 403
           F++ML+ G+EID NVVSAVLGV   D SL LG+Q+HS ++K+ FS N FV+NGLINMYSK
Sbjct: 348 FIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSK 407

Query: 404 CGALDESVKVFDRMQNRNSVTWNSMIAAFARHGDGSKALHLYENMKLEGAKPTDITFLSL 463
           CG L +S  VF RM  RN V+WNSMIAAFARHG G  AL LYE M     KPTD+TFLSL
Sbjct: 408 CGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSL 467

Query: 464 LHACSHVGLVNKGMEFLESMTKDHRMNPRSEHYACVVDMLGRAGLLSEARTFIEKLPEQP 523
           LHACSHVGL++KG E L  M + H + PR+EHY C++DMLGRAGLL EA++FI+ LP +P
Sbjct: 468 LHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKP 527

Query: 524 GLLVWQALLGACSLYGDSEMGKYAAEHLFSETPYSSVPYVLLANIYSSEGNWKERARTIR 583
              +WQALLGACS +GD+E+G+YAAE LF   P SS  ++L+ANIYSS G WKERA+TI+
Sbjct: 528 DCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIK 587

Query: 584 KMKETGMAKETGISWIEIDKKVHSFTVGDKRHPQADIIYGVLMDLFVHMVDEGYVPDKKF 643
           +MK  G+ KETGIS IEI+ K HSF V DK HPQA+ IY VL  LF  MVDEGY PDK+F
Sbjct: 588 RMKAMGVTKETGISSIEIEHKTHSFVVEDKLHPQAEAIYDVLSGLFPVMVDEGYRPDKRF 647

Query: 644 ILFYLDPD 645
           IL Y   D
Sbjct: 648 ILCYTGDD 652

BLAST of Carg12907 vs. TAIR 10
Match: AT5G09950.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 404.1 bits (1037), Expect = 2.4e-112
Identity = 216/575 (37.57%), Postives = 337/575 (58.61%), Query Frame = 0

Query: 79  VVIMNSLISMYERCGKLPDAVKVFDEMPTRDTVSWNALIGGFMRNGEFYAGFSYFKAMCL 138
           V I N L++MY +CG + DA +VF  M  +D+VSWN++I G  +NG F      +K+M  
Sbjct: 349 VGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSM-R 408

Query: 139 VGDCKFDKATLTTILSACDGAEMYCIIEMMHGLTFLSGYEQEITVGNALISSYFKCGCVG 198
             D      TL + LS+C   +   + + +HG +   G +  ++V NAL++ Y + G + 
Sbjct: 409 RHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLN 468

Query: 199 FGKQVFYETEERNVITWTAVISGLAQNGHH-EHSLELFREMMSCGSVEPNSLTYLSLLTA 258
             +++F    E + ++W ++I  LA++      ++  F      G  + N +T+ S+L+A
Sbjct: 469 ECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQ-KLNRITFSSVLSA 528

Query: 259 CSGLEALEEGCQIHGLILKLGIQSDLCIGSALMDMYSKCGSIGDAWKIF-ELAEELDMVS 318
            S L   E G QIHGL LK  I  +    +AL+  Y KCG +    KIF  +AE  D V+
Sbjct: 529 VSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVT 588

Query: 319 LTVILAGFTQNGCEEEAIQIFLKMLKMGIEIDENVVSAVLGVFGADTSLRLGQQVHSFIV 378
              +++G+  N    +A+ +   ML+ G  +D  + + VL  F +  +L  G +VH+  V
Sbjct: 589 WNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSV 648

Query: 379 KKNFSCNPFVSNGLINMYSKCGALDESVKVFDRMQNRNSVTWNSMIAAFARHGDGSKALH 438
           +     +  V + L++MYSKCG LD +++ F+ M  RNS +WNSMI+ +ARHG G +AL 
Sbjct: 649 RACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALK 708

Query: 439 LYENMKLEGAKPTD-ITFLSLLHACSHVGLVNKGMEFLESMTKDHRMNPRSEHYACVVDM 498
           L+E MKL+G  P D +TF+ +L ACSH GL+ +G +  ESM+  + + PR EH++C+ D+
Sbjct: 709 LFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADV 768

Query: 499 LGRAGLLSEARTFIEKLPEQPGLLVWQALLGACSLYG--DSEMGKYAAEHLFSETPYSSV 558
           LGRAG L +   FIEK+P +P +L+W+ +LGAC       +E+GK AAE LF   P ++V
Sbjct: 769 LGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAV 828

Query: 559 PYVLLANIYSSEGNWKERARTIRKMKETGMAKETGISWIEIDKKVHSFTVGDKRHPQADI 618
            YVLL N+Y++ G W++  +  +KMK+  + KE G SW+ +   VH F  GDK HP AD+
Sbjct: 829 NYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADV 888

Query: 619 IYGVLMDLFVHMVDEGYVPDKKFILFYLDPDDKKE 649
           IY  L +L   M D GYVP   F L+ L+ ++K+E
Sbjct: 889 IYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEE 921

BLAST of Carg12907 vs. TAIR 10
Match: AT4G13650.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 399.4 bits (1025), Expect = 5.8e-111
Identity = 211/619 (34.09%), Postives = 348/619 (56.22%), Query Frame = 0

Query: 33  NLLNIRPQPNP-SFLLSVCGRHGNLYLGSSLHASIIKSFELSNHENGVVIMNSLISMYER 92
           +L  + P  N  + L+  C   G L+ G  LHA   K    SN++    I  +L+++Y +
Sbjct: 381 HLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNK----IEGALLNLYAK 440

Query: 93  CGKLPDAVKVFDEMPTRDTVSWNALIGGFMRNGEFYAGFSYFKAMCLVGDCKFDKATLTT 152
           C  +  A+  F E    + V WN ++  +    +    F  F+ M  + +   ++ T  +
Sbjct: 441 CADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQM-QIEEIVPNQYTYPS 500

Query: 153 ILSACDGAEMYCIIEMMHGLTFLSGYEQEITVGNALISSYFKCGCVGFGKQVFYETEERN 212
           IL  C       + E +H     + ++    V + LI  Y K G +     +      ++
Sbjct: 501 ILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKD 560

Query: 213 VITWTAVISGLAQNGHHEHSLELFREMMSCGSVEPNSLTYLSLLTACSGLEALEEGCQIH 272
           V++WT +I+G  Q    + +L  FR+M+  G +  + +   + ++AC+GL+AL+EG QIH
Sbjct: 561 VVSWTTMIAGYTQYNFDDKALTTFRQMLDRG-IRSDEVGLTNAVSACAGLQALKEGQQIH 620

Query: 273 GLILKLGIQSDLCIGSALMDMYSKCGSIGDAWKIFELAEELDMVSLTVILAGFTQNGCEE 332
                 G  SDL   +AL+ +YS+CG I +++  FE  E  D ++   +++GF Q+G  E
Sbjct: 621 AQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNE 680

Query: 333 EAIQIFLKMLKMGIEIDENVVSAVLGVFGADTSLRLGQQVHSFIVKKNFSCNPFVSNGLI 392
           EA+++F++M + GI+ +     + +       +++ G+QVH+ I K  +     V N LI
Sbjct: 681 EALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALI 740

Query: 393 NMYSKCGALDESVKVFDRMQNRNSVTWNSMIAAFARHGDGSKALHLYENMKLEGAKPTDI 452
           +MY+KCG++ ++ K F  +  +N V+WN++I A+++HG GS+AL  ++ M     +P  +
Sbjct: 741 SMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHV 800

Query: 453 TFLSLLHACSHVGLVNKGMEFLESMTKDHRMNPRSEHYACVVDMLGRAGLLSEARTFIEK 512
           T + +L ACSH+GLV+KG+ + ESM  ++ ++P+ EHY CVVDML RAGLLS A+ FI++
Sbjct: 801 TLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQE 860

Query: 513 LPEQPGLLVWQALLGACSLYGDSEMGKYAAEHLFSETPYSSVPYVLLANIYSSEGNWKER 572
           +P +P  LVW+ LL AC ++ + E+G++AA HL    P  S  YVLL+N+Y+    W  R
Sbjct: 861 MPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDAR 920

Query: 573 ARTIRKMKETGMAKETGISWIEIDKKVHSFTVGDKRHPQADIIYGVLMDLFVHMVDEGYV 632
             T +KMKE G+ KE G SWIE+   +HSF VGD+ HP AD I+    DL     + GYV
Sbjct: 921 DLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYV 980

Query: 633 PDKKFILFYLDPDDKKEPI 651
            D   +L  L   ++K+PI
Sbjct: 981 QDCFSLLNELQ-HEQKDPI 992

BLAST of Carg12907 vs. TAIR 10
Match: AT3G63370.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 397.1 bits (1019), Expect = 2.9e-110
Identity = 205/602 (34.05%), Postives = 345/602 (57.31%), Query Frame = 0

Query: 23  KPIPSKPICRNLLNIRPQPNPSFL---LSVCGRHGNLYLGSSLHASIIKSFELSNHENGV 82
           K + +  + R +    P PN   +   L+ C       LG  +HAS++KS   S H + +
Sbjct: 264 KSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKS---STHSSEL 323

Query: 83  VIMNSLISMYERCGKLPDAVKVFDEMPTRDTVSWNALIGGFMRNGEFYAGFSYFKAMCLV 142
            + N+LI+MY RCGK+P A ++  +M   D V+WN+LI G+++N  +     +F  M   
Sbjct: 324 YVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAA 383

Query: 143 GDCKFDKATLTTILSACDGAEMYCIIEMMHGLTFLSGYEQEITVGNALISSYFKCGCVGF 202
           G  K D+ ++T+I++A            +H      G++  + VGN LI  Y KC    +
Sbjct: 384 GH-KSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCY 443

Query: 203 GKQVFYETEERNVITWTAVISGLAQNGHHEHSLELFREMMSCGSVEPNSLTYLSLLTACS 262
             + F    ++++I+WT VI+G AQN  H  +LELFR++     +E + +   S+L A S
Sbjct: 444 MGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAK-KRMEIDEMILGSILRASS 503

Query: 263 GLEALEEGCQIHGLILKLGIQSDLCIGSALMDMYSKCGSIGDAWKIFELAEELDMVSLTV 322
            L+++    +IH  IL+ G+  D  I + L+D+Y KC ++G A ++FE  +  D+VS T 
Sbjct: 504 VLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTS 563

Query: 323 ILAGFTQNGCEEEAIQIFLKMLKMGIEIDENVVSAVLGVFGADTSLRLGQQVHSFIVKKN 382
           +++    NG E EA+++F +M++ G+  D   +  +L    + ++L  G+++H ++++K 
Sbjct: 564 MISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKG 623

Query: 383 FSCNPFVSNGLINMYSKCGALDESVKVFDRMQNRNSVTWNSMIAAFARHGDGSKALHLYE 442
           F     ++  +++MY+ CG L  +  VFDR++ +  + + SMI A+  HG G  A+ L++
Sbjct: 624 FCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFD 683

Query: 443 NMKLEGAKPTDITFLSLLHACSHVGLVNKGMEFLESMTKDHRMNPRSEHYACVVDMLGRA 502
            M+ E   P  I+FL+LL+ACSH GL+++G  FL+ M  ++ + P  EHY C+VDMLGRA
Sbjct: 684 KMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRA 743

Query: 503 GLLSEARTFIEKLPEQPGLLVWQALLGACSLYGDSEMGKYAAEHLFSETPYSSVPYVLLA 562
             + EA  F++ +  +P   VW ALL AC  + + E+G+ AA+ L    P +    VL++
Sbjct: 744 NCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVS 803

Query: 563 NIYSSEGNWKERARTIRKMKETGMAKETGISWIEIDKKVHSFTVGDKRHPQADIIYGVLM 622
           N+++ +G W +  +   KMK +GM K  G SWIE+D KVH FT  DK HP++  IY  L 
Sbjct: 804 NVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLS 859

BLAST of Carg12907 vs. TAIR 10
Match: AT3G49170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 393.7 bits (1010), Expect = 3.2e-109
Identity = 212/575 (36.87%), Postives = 327/575 (56.87%), Query Frame = 0

Query: 76  ENGVVIMNSLISMYERC-GKLPDAVKVFDEMPTRDTVSWNALIGGFMRNGEFYAGFSYFK 135
           E+ V +  SLI M+ +      +A KVFD+M   + V+W  +I   M+ G       +F 
Sbjct: 199 ESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFL 258

Query: 136 AMCLVGDCKFDKATLTTILSACDGAEMYCIIEMMHGLTFLSGYEQEITVGNALISSYFKC 195
            M L G  + DK TL+++ SAC   E   + + +H     SG   ++    +L+  Y KC
Sbjct: 259 DMVLSG-FESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKC 318

Query: 196 ---GCVGFGKQVFYETEERNVITWTAVISGLAQNGH-HEHSLELFREMMSCGSVEPNSLT 255
              G V   ++VF   E+ +V++WTA+I+G  +N +    ++ LF EM++ G VEPN  T
Sbjct: 319 SADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFT 378

Query: 256 YLSLLTACSGLEALEEGCQIHGLILKLGIQSDLCIGSALMDMYSKCGSIGDAWKIFELAE 315
           + S   AC  L     G Q+ G   K G+ S+  + ++++ M+ K   + DA + FE   
Sbjct: 379 FSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLS 438

Query: 316 ELDMVSLTVILAGFTQNGCEEEAIQIFLKMLKMGIEIDENVVSAVLGVFGADTSLRLGQQ 375
           E ++VS    L G  +N   E+A ++  ++ +  + +     +++L       S+R G+Q
Sbjct: 439 EKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQ 498

Query: 376 VHSFIVKKNFSCNPFVSNGLINMYSKCGALDESVKVFDRMQNRNSVTWNSMIAAFARHGD 435
           +HS +VK   SCN  V N LI+MYSKCG++D + +VF+ M+NRN ++W SMI  FA+HG 
Sbjct: 499 IHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGF 558

Query: 436 GSKALHLYENMKLEGAKPTDITFLSLLHACSHVGLVNKGMEFLESMTKDHRMNPRSEHYA 495
             + L  +  M  EG KP ++T++++L ACSHVGLV++G     SM +DH++ P+ EHYA
Sbjct: 559 AIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYA 618

Query: 496 CVVDMLGRAGLLSEARTFIEKLPEQPGLLVWQALLGACSLYGDSEMGKYAAEHLFSETPY 555
           C+VD+L RAGLL++A  FI  +P Q  +LVW+  LGAC ++ ++E+GK AA  +    P 
Sbjct: 619 CMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPN 678

Query: 556 SSVPYVLLANIYSSEGNWKERARTIRKMKETGMAKETGISWIEIDKKVHSFTVGDKRHPQ 615
               Y+ L+NIY+  G W+E     RKMKE  + KE G SWIE+  K+H F VGD  HP 
Sbjct: 679 EPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPN 738

Query: 616 ADIIYGVLMDLFVHMVDEGYVPDKKFILFYLDPDD 646
           A  IY  L  L   +   GYVPD   +L  L+ ++
Sbjct: 739 AHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEEN 770

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7030242.10.0e+00100.00Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
KAG6599242.10.0e+0099.85Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
XP_023546072.10.0e+0098.14pentatricopeptide repeat-containing protein At3g05340 isoform X2 [Cucurbita pepo... [more]
XP_023545247.10.0e+0098.14pentatricopeptide repeat-containing protein At3g05340-like isoform X2 [Cucurbita... [more]
XP_022946255.10.0e+0097.68pentatricopeptide repeat-containing protein At3g05340 isoform X2 [Cucurbita mosc... [more]
Match NameE-valueIdentityDescription
Q9MA851.5e-20460.03Pentatricopeptide repeat-containing protein At3g05340 OS=Arabidopsis thaliana OX... [more]
Q9M1V32.7e-11333.80Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidop... [more]
Q9FIB23.3e-11137.57Putative pentatricopeptide repeat-containing protein At5g09950 OS=Arabidopsis th... [more]
Q9SVP78.2e-11034.09Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX... [more]
Q5G1T14.5e-10836.87Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A6J1G3C00.0e+0097.68pentatricopeptide repeat-containing protein At3g05340 isoform X2 OS=Cucurbita mo... [more]
A0A6J1KFW90.0e+0097.05pentatricopeptide repeat-containing protein At3g05340 OS=Cucurbita maxima OX=366... [more]
A0A6J1G3500.0e+0097.60pentatricopeptide repeat-containing protein At3g05340 isoform X3 OS=Cucurbita mo... [more]
A0A6J1G3A20.0e+0097.76pentatricopeptide repeat-containing protein At3g05340 isoform X1 OS=Cucurbita mo... [more]
A0A1S4E0D40.0e+0087.32pentatricopeptide repeat-containing protein At3g05340 OS=Cucumis melo OX=3656 GN... [more]
Match NameE-valueIdentityDescription
AT3G05340.11.1e-20560.03Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G09950.12.4e-11237.57Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G13650.15.8e-11134.09Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G63370.12.9e-11034.05Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G49170.13.2e-10936.87Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 263..362
e-value: 8.0E-15
score: 56.6
coord: 42..163
e-value: 2.8E-20
score: 74.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 480..608
e-value: 2.8E-7
score: 32.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 363..479
e-value: 1.0E-28
score: 102.6
coord: 165..262
e-value: 4.1E-16
score: 61.2
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 213..247
e-value: 7.7E-8
score: 30.1
coord: 316..349
e-value: 1.1E-4
score: 20.2
coord: 416..449
e-value: 1.6E-7
score: 29.0
coord: 111..137
e-value: 0.0015
score: 16.5
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 287..309
e-value: 0.83
score: 10.0
coord: 80..107
e-value: 3.7E-5
score: 23.7
coord: 111..137
e-value: 0.0017
score: 18.5
coord: 315..345
e-value: 6.2E-4
score: 19.8
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 210..258
e-value: 1.7E-10
score: 40.9
coord: 414..461
e-value: 1.6E-12
score: 47.4
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 383..413
score: 9.284279
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 78..112
score: 9.404853
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 414..448
score: 12.605553
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 313..347
score: 9.678885
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 211..245
score: 10.994242
IPR032867DYW domainPFAMPF14432DYW_deaminasecoord: 588..648
e-value: 3.9E-9
score: 36.5
NoneNo IPR availablePANTHERPTHR47925OS01G0913400 PROTEIN-RELATEDcoord: 42..637
NoneNo IPR availablePANTHERPTHR47925:SF89BNAA05G31840D PROTEINcoord: 42..637

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg12907-RACarg12907-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding