Carg12874 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg12874
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	cleavage and polyadenylation specificity factor subunit 6-like
Location	Carg_Chr09: 5652920 .. 5664662 (-)
RNA-Seq Expression	Carg12874
Synteny	Carg12874

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGAAGGAGAGGGAGGGCTTGGTGTGGGTGCGGATCAGATTGATCAGTTTCATCGGAACGAGGCGATTTCTGCCGTTGCTGATGATGGTTTCTTAGGCGAAGATGAGGATGAATATGAGGACTTGTACAACGATGTTAACGTTGGGGAGGGGTTTCTTCAGTCGTTGAGGAAAAACGATGATTTGGGTTTCAAGAGCGAGGAGGAGCCTAAGATGGAGCCTCCTGCTGCTGTACCACCCACTTCCGGTGCTTCGATACCTGGTTTTGGCGGAGGTACGACTGATGTTCCTGGTTTGGGAGATGGTGGGCACAGTGTTGCGGAAAGAGTAACTGACGGTTACAATCAGATTCCAGATTTAAGAACAAATGAGATGGCTATCAGAGTTGGGGCGGGATCGGGGCCACCTATGGGTGGTGGAGGTGGGATTAGGGTTGAATTAGGACAGGGGAGTAAAACCAATGAGTTGGAGGAGCGAAGTAGTAATAATGTTGCTGCGCATCAGGCTCCGCCACAGCAACAGCCACATCCACAGCAACAGCTACAGCCACCGGCACAGCCACAGCCACTGGCACAGCCACAGCCACAGCACCACCACCAAGCGCAGCAGGGCGGAGTTTTAGGAAATCCAGTGAGCGTAGAAAATGAAGGTTTGCTAAGGCAAGGTGGTGGCGTAAATGTAAATGGGGTTGGTGGAAATGGGTTCGGTAATGTGGGGAATGCAGGGGGAGGTGGAGGTGGAGGTGGAGGTGGAACCATTTTGTTTGTTGGGGATTTACATTGGTGGACTACAGATGCGGAGCTGGAGGTGGAACTCTGTAAGTATGGTCCGTTGAAGGAGGTTAAGTTTTTTGACGAGAAAGCCAGTGGGAAATCAAAAGGCTACTGCCAGGTTGAGTTTTATGATCCTTCTGCTGCCACGGCTTGCAAGGAGGGGATGAACGGGCATATGTTTAATGGACGGCCGTGTGTTGTTGCATATGCATCACCATTTAGTGTGAAGAGAATGGGAGAAGCCCAAGTGAACAGGAACCAACAGATGGCCCAAGCTACTAATCCTCAAGCAAGGAGAGGTCCTAATGATACTGTAGGTAAAATGGGTGGAAGTAGCATTGCGACGGGTGGTAATTATCAAGGTGGTGATAATAACAGAGGTTCTGGGAGAGGTAATTGGGGAAGAGGTAATGCACATGGAATGGGTGGTCGAGGGCCTGCTGGCCCAATGAGGAATAGGGGTGGTGGAATGGGTGGCAGAGGTATAATGGGAAATGGTGGAAATGGTTTTGGTCAAGGAATGGGTGCCACCCCTCCTTTGTTGCATCCGCAGTCAATGATGGGTCAAGGTTTTGATCCATCTTTTGGTGCACCCATGGGAAGAATGGGCACATATGGTGGTTTTCCTGGAGCTCCGGCTCCCCCTTTCTCTGGAATTTTATCATCCTTTCCCCCTGTTGGGGGTGTTGGCCTTCCTGGAGTAGCTCCTCATGTGAACCCAGCATTTTTTGGAAGAGGTATGCCTATGAATGGAATGGGGATGATGCCAACATCGGGTGTTGATGGGCCTAATATGGGAATGTGGTCTGACCCTAGTATGGGGGGATGGGGCAGTGAAGAGCATGGTGGAGGGAGAGCTGGCGAGTCTAGTTATGGAGAAGAAGCTGGGTCTGACCAGCAATATGGTGAAGGTAGTCATGAAAGAGGAGCCTGGGCAAATTCTGCAAAGGAGAAAGATAGAGGATCCGAAAGGGATTGGTCACAGTCTTCTGATAGAAGGTATCGAGATGATAGAGAGAGATCCAAAGAAAAGGATCCGGGGCCTGACCATGATTGGCCAGATAGAAGGCCACGTGATGATAGAGACATAGGTCGTGAAAGGGACAAGGATAGGGATCGGGATCGGGATAAGGAACGATCTCGAGATTATGAGCGGGGCCATCATGATCGTGATCGTGACCGTGACAGGGATCGTGACCGTGATAGGTACAAGGAAGATAGGGACAGATATTCTGATCATCATAGGTACAGAGACCGGGAGCCAGAGCATGACGAGGATTGGGATAGGGGACGGTCGTCAAGGACTCATAGCAAGTCCCGATTACCACAAGAAGAAGAAAATCGTTCTAGAACAAGGGATGCTGATTATGGGAAGAGGCGGAGGCTTACTTCTGAGTAGCTGAATAATTCAGCATACATGCTTTAATGTTTAAACTATATAGAGTATGGCTTTCCATGTTCATTTGGGTTCTCTCTTCGAAGTTCTGGGCTCTTTGATTCATCATTGCTCTTTTGCCTATGCTGTTTATTGTCTGAACCTCGGCGTATGTCTCTCTACCTACAGGAGCATGGTCTGATTTTTTGCAAAAAAATGTAAGTTCATACAATCCTTTTCCTTTTCCCAAATTTCTAATATTAAATTCTGGTCGATTTGTTGGCTTCGTCTTGTATACTAGGTCTTGAAATATGGTCATGCTAATTAACGACGCTGTTCAAAACTGCATCCCTTTAGAAATGGATGTTTACTCTATTAATGCTCTAATGAAATTTCCTCTTGTTGCAGCTATAGTAGGTTTTTGGTTTTTAGAACTAATACCATTGTTGACTTTATTACCATATTTGTACCTTCTATTGTTGTTTTACCGACCTCATTTTTCACTATGTTTACATTTCCATTGGATAATTATCAAGGTTAGCATTTCTTTATAATTAAATAGTTTTTTTTTTTTTTTTGCTTCTTTCGCCTTTGAGGATATAGGCCGATGATGTTGTTTCCCTTTAAGATTTGTGGGGCACTAATGATTCTCTCTATCAAGTTGTTGACATTTATTTTGTTGATTTCTCTCTCATCATATATCTTAGGAGTGAATGAGGTTTTTTTCCACCAATTTGAAAGTAGCTTGTTTTGAAGATAATGAATCTCTTTCAACAAGATGTTGGTTTGTTTAAGTTAGCATTTATTTTGTTGGTTCAAATTTCAAAGAGTTTACTGAAAGAAGCCTTTTTTGTCTTTGTTCGAGGTAGTTTTCTTCGAAGAGGTGTTGGATTGTTCAAGTCAACATTTGTTGCGTTGGTTCGAATTTTAAAAGGTTCTCTTGGGAGAAGCCAATTTTCATCCTTCATTTATTCTAATTTCTTAGGGGCGTCCAAGATTGCTTCCATTTTCAAGATAACCTTAATCCTTTTAGGGTCTATAGGCAGTACACCGGGCGGTGTGCTAGTGAGGACGCTGAACTCTGAAGGGGGGTGGACACCGAGCGGTGTGCCAGCAAAGACGCTGAGCCCTGAAGGGGGTGGACTACCGAGCGGTGTGCTAGCGAAGACGTTGAACTTTGAAGGGGGTGGACACCGAGCGGTGTGCCAGCAAAGACGCTGAGCCTGAAGGGGGTGGACTGTAAGATCCCACATCGATTGAAAAGGGGAATGAGTGTCAGCAAGGATGTTGGGCCCCGAAGGGGGGTGAATTGTGAGATACCACATTGGTTGGAGAGGGGAACTAAGCATTACTTATAAGGGTGTGGAAACCTCTCCCTAGTAGACACATTTTAAAAACCTTGAGGGGAAGCCCGAAAGGAAAAACCCAAAGAAGATAATATCTATTAGCAGTGGGCTTGAGCCGTTACACCACTCCTCAAGTTTGTTCGGTTCTCATTAATGTGCATGAGCAAGAAGATTATAATCGTTTCTAAGTTCTTGATTTTGTATTATCTTTCTTGTATCTTCACTCCCTTTGGGAGTTTGAAACCTTGGAACATTTTTCCTTTTCATTATATAGAAGTTGTTTCCGGACACAGACATTTTCATTTTCTTAAATAATAATAGAAAAATCAGGACACAGACATGGTTAGGAACGTAGGACTCTTCTATTAGAAGTTCTTAATTATATTTTAATTTTCCATACATTTTAATGACTTTCACACTAAAAGTATGTTTTACTTTGTGATATTTAGTTTTAAAAGATTGGAAAAGGTTAAAAGGTTAATATAGTTTTGTTGCAAAAAGTTCATTGTTATCCTTGTTTCTGATTTTATCTCTGAAGTTGTAGAAGTGTTAGATTAGTTTCCTACTTCTATTAAGTTCTGATCTGTTTTTACTGTTTAGAGCTGAGTTAGGAAAAAATGCAAGATTAAAGGAAAATGAATTAATGGCCAAAACGAGGGTTTCAACAGTTCAATTGAAGGAAATATTTTAGAGTACTCTAGTAGAAAGAAAAAAAGAAGGTATGAGGTTTCCAAATACGACACCGGCCTGAGGTTTGCAGATACTTCGATTATCAGGACTTCCAACAATCGGTTGGAGACAAAATCATGTCCACATCTACAAGAAGGAAAATGGAGGATGGTTATATCTTCTTTTTCCTTTCTGATATCTCTGAGGTGAGCTTGAGTAGTGATGACAGTTGGGACAACAACTATGATTATGATTAGATTGGAAATAAAAGGAAAGATGTGGAACAGACCCTTTGGTTGGATGGGACTTAGTTACATTACTCGATCCTCCTCCTAGTTCGGGAAAAGAGTTTACCTCTGCTAAATAAAAAAAAAAAAGTTGGTTTCTGTATAGATTATTTGTGTAAAGAAGATGTCAAAGCCTCTATAGATATGGAAGATTCGAAGAGGGTTAAGGAAGAAGGAAAATGGAGGATGATTATATCTTCTTTTGCATTCCTGATATCTCTGAGGTGAGCTTTAGTAGTGATGACAGTTGGGACAACAACTATGAATGATTAGATTGGAAATCACAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGAGGGAAGAGGATGTCGAAGAGACCTTTTGTTCGGATGGGGCTTAGTTACCATACTCGATCCTTGTAGTTCGGGAAAGAGTTTACTTCTGCAACAAAAGGAAAGTTGTTTCCTGTTTCAGATTATTTGGCTAAAGATGTCAAAGCTTCTAAAGATATGGAAGATTTGGCTAAAGTTGTTTTCTGTTTGAATTGACATGCTTATTTTCGTTTTGTGAGGATGTTTGGAATGACTTTCTAAGTGTTTAGTTTCGAAGCGCTTAGAAAATAAATCCAAACCGGCCTCTTTCTCTCGATTTTAGATGTTTTGTGTCTCATCTACTCTGAGTTTCCATGATCTACATGTTTTTTTCTCTCTTCATATTGGCATACTAATTATCAATAGGCGAGCATGTCATCAACGTTGTTTCTGATTGGTAGCACCCTCTCATTTTCTGTTGTTTTGTAGCTTAAACGACATTCGATACCGAGGATTTCATTCAGTGGAACAGCAGTTGGTTCGGTGACAACATGAAACCTTTAAATTCGTGTCTGCATAGAGAGAACCCCCCCATGCATGGCAATACCTTCTCACTCTATTAATTTGATAAAGAAACTTCTTGGTTTAGAACTTCTCGCGTTTCTTTTGAATGATGTTTCTTGACTTCTTGGCACTTGATGACTTTGATATTCTTGTTTTAATGGCTAAATACTGTTCGAGTCTAGACATGTCTATATGTTTTCAGACATGTAAATGGCTTACACTATGTTGTTAGAGTATCGTAGCCTCGAGGATGTTGTGTTGTGCGTTATTCTGTTTTATGAGTTGTTGTATCATATATTCACACACCTCTTTCCAACCCTTTTTTTTCCTTTGGGTTTCCTTGATTCCACACCTTAGCCATTCTATTGTCAAGTGTGGAGCTAAGCATTCTTTTAGAGGTTGTTGTATGTACTCATACTTGTTTGTACCTTTTACCAATTGATAGATGTAGCTCTCTGAGGTTGTTTGCCCTCATACTTGTATGTATGTACCTGTTGTTCTCTGAGGTTGTTTGGCCTCATACTTGTATGTATGTACCTGTTACCAATTGACTAGATGTAGCTTCATTCAAAGGTTGTATTATGTATGTAAATTCTTGACTAGATGTAGTTTCACAGGTTGTATATACCCATTACTTTGTATGGATCTGTTCTGTTGTTGTTTGTTTTATAAGAGACAATTTTATCGATGATTGAGATTTACAGAAGGATTGTATAATCTATAGCGTTTACAGAAGAACTTCCCAATTTGCAATGAGGGAGGTATAACTGTAGGAAGTGAATATTAGACCGTTTGTATCAAGATATAGCCTGGTAAATAATATTATCGAAAAGTTGTGTAGGTCTATGTCTTCTCTGCAAATATTCTTTGATTTCTTTCATTTACAGAAGGGTTGTATAATCTACGGCGTTTATAGAAGAACTTCCCAATTTGCAATGAGGGAGGTATAACCGTAGGAAGTGAATATTAGACCGTTTGTATCAAGATATAGCCTAGTAAACAACATTGTCGAAAAGTTGTTGCGTAGGTTTTTATCTTTTCTGTAAATATTCTTTGATTTCTTTCTTTCCACAGGTTCCAGAAGAAAGCCGTGATGAGATTTATAGGACTTTTACATTTTTGAAAGGCGGTACGTTAAGACCATATCCAAAAGTTTCTTTACTTCTATTGGAAATGTGAGATGTCATTCGAATATATTGAGAATCACTGTCTAGAAATTTTGAGCATACGTGCATTGTATATGAACCTGTTGTCCATTTCATTAAGAGGTATAGTCATGGATATCATTAGTTCATGGAAAGCGGCTCTGCTTTTTGTTCCATTGGTCTATGATTTTGTGAAGTATGAAAATTGATGGGCAGAGATCATTACTCGTGTTCCTTTTGGAAGAAAATAGTCGAATGCTTTCTCTCTAGGATCACTTTTTCTAAGAACACTTTCAATGATCAATATGGATATATATTCTAGTGATCCATGAGCGTTATGTGAAATGGCTTCCAAAGATTCGACTCGAACTAGAGATTCATCAAGTAATGTTGTGTTTGGTGTAACGTCCTTCCACTTTCATTTGACCTTTAAGGTGTTCATCATATTTGGCTACCTCGATATGGGTAAATGTTTTTTATTACATTCCTCAAATTGGTCTCTTGTGTGTGTTTGTTAGCTATTTAATTCTTTACCATATGCATATAACGACAACAAAAAAATGATTATTTTGATCATTATTGGTAGTTCAGCAGTAATAGATTCGTAACGGACTCCCTTCGAAGAAGATTTTCTGATAAAAATAGTATTTTGGCTTGTTCTAAAGTCCAAATAGAAAATACGGCTTGGTAAGAGATTGCTTCTTCCAAAGCACGCCCTGTTCGTTCCGCTCGCAACAATCCATCGAGTTCTCCTCGTGAAAAAACATTAGACATTCCATCTTCTGAAACCAACACTTTTGATGTTATTTGACGTACAATAATCTCAACATGTCTATTATGGATCTCCACCCCCGGGATCGATAAACCTTTTGGATCTTATTAACCAAAGAGATACGACTTTGCACAAACCGACGAGGATAGTTCTAAATCTGGGCCAAGACGAACTATTGTAGGGGATTCATTAAAATCATTGCCTATTAAGAGAGAAAATGCTGTATTTCAGTATTGAATAATTATCGAAGAGGATCGCCCTTCTTAAATTGTTGAGAAAATGGTTAATTGTTTATTTACTCGAGATGAGGAGTAGCTTTTACGAGTACCTAAAGTAAAAGGGTGTCTAACCTCAATACGAGTACCTAACCTAAATACGAGTACGAAGGAACCGGCTTAAATAAATTACCAAATTTTATTACAAAAAAAAAAAAAAAAAAAAAAAAAGAGCCCGACTTAAGGTTATTAATGAAAATGTAAAATTTAAAATCTAAGCATTTAAAAGTTTGAATCGACGCTCAAATCCTTAACTTTTTTTAATCTATGTTCTAATCAACTGAACTACATTACGTTCACGCTCGTATTTTATTTAAATAATGTTAATAATGGAATTAAAATTATATATATATATATAACTTCTCCCTACCCAAGGTTATATACGGGAGCTGTTGTTAATAATTGGTTTAGCTCACATGTCGTTAGAAGGTGAGTGCCGCACAATCGCAAGTCCACTACCATCAAAAGTGCGATTGCGACAGACGGTAAGGGAGAGGGGTAATCCTCATCCTCATCATTGACGGTTCATCCAAAATGAAAGTATAATTAAATGACAGTTAAACCCAGCGCAAGTTAGCAACGAAGTTGAAGAACCGAAATTTCCAGTATATCCACTCGCGTTTTCCAGATTAGGGTTTCTCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGTTTTCTCTATTTCTTTTGCACTTATTCCGCTTTGAAAGATCTTTGAACTCTTATCTGCTTTTGCTCACTTCGTATCTTGTAAGTTCTTCAATAGACTTTGTGATTGTTACTTGCATTTAAATTTATAGTTTTGAATGAATAGCAAAAATCCATTAGTTGGGGAAGTCGAGGAAGCTTAGAGATGGATGAAGGTGCGGGAGGGTTTGGGGAGGGTATGGATCGTATAGACCAGTTCCATAGAAATGAGGCAATTTCTGCTGTTGCTGATGAGGGTTTCTTAGGCGAGGATGAAGACGAATACGAGGACCTGTACAACGATGTTAATGTTGGGGAGGGGTTTCTTCAATCTTTGAGGAAAAACGATGATTTAGGATATAAGAAGGAGGAGGAGCTGAAGATCGAGTCTGGTTCAGCTACAGCACCCAACTTGGGTGCTTCGGTGCCTGGTGTTGTTGCTGCTGCTTCGGCTGAAGTTGCTGGTGGTCCGAGGGCTTCGGACCGAGTACCGCCGAGTTACTATCAGGTTCCAGATGTAAGAACGAATGAGATGGCTACTAGAGCAGCGCCGCCGGTGGGTGGTGGAGGTGGAATTAGGGTTGAATTAGGGCAAGGGAGTAAATTCAATGAAGTAGAGGAGAGTAGTAATAACGTAGTTGGGCATCCAGGTCCTCAACAGCATCAGCACCAGCCTCCTCATGGAGGAGTTTTAGCAAATGCAGGGAATGTAGAAAATGATGGTTTGCTTAGGCAAGGTGGTGGAGTGAATGTGAATGGGTTTGGTAATGCTGGGAACGGAGGGGGAGGCGGCGGGGGGACGATTTTGTTTGTTGGTGATTTACATTGGTGGACTACAGATGAGGAGCTGGAGGTGGAACTCTGCAAGTATGGTCCGGTGAAAGAGGTCAAATTCTTCGACGAAAAGGCTAGTGGGAAGTCGAAAGGGTATTGTCAAGTTGAATTTTATGATCCATCTGCTGCTACAGCCTGCAAGGAAGGAATGAATGGGCATATTTTTAATGGACGGCCATGCGTTGTTGCCTATGCATCACCATTTAGTGTTAAGAGGATGGGAGAAGCCCAAGTAAATAGGAACCAACCCATGGCGCAATCTACTAACGCTCAAGCAAGGAGAGGTGCCAATGATGCTGCAGGTAAAATGGTTGGAAGTAACATTGCAACGGGTGGTAATTATCAAGGTGGTGGTGATAGCAATAGAGGTTCTGGGAGAGGTAATTGGGGGAGAGGTAATGTTCATGGAATGGGAGGTAGAGGACCAGCTGGGGCAATGAGGAACAGGGGAGGTGGGATGGGGGGCAGAGGTATAATGGGGAATGGTGGAAATGGATTTGGCCAAGGAATTGGTGCCGCCCCTCCTTTGTTGCATCCGCAGTCGATGATGGGTCAAGGTTTCGATCCAGCTTTTGGTGCACCCATGGGAAGAATGGGCACATATGGTGGTTTTCCTGGTGCTCCCACGCCCCCTTTCTCTGGAATTTTATCTTCATTTCCACCTGTTGGGGGTGTTGGCCTTCCTGGAGTAGCTCCTCATGTGAACCCAGCATTTTTCGGTAGAGGTATGCATATGGGTGGAATGGGGATGATGCCAAGTTCGGGTGTCGATGGGGGGCCTAATATGGGGATGTGGTCTGATCCTAGTATGGGTGGATGGGGCATGGAAGAACATGGTGGAGGGAGAGCTGGAGAGTCTAGTTATGGAGAAGAAGCTGGGTCTGACCAACAATATGGTGAAGGCAGTCACGATAAAGGCGGGTGGGCAAGTTCTGCTAAGGAGAAAGATAAAGGCTCCGAAAGGGATTGGTCACAATCTTCTGATAGAAGGTATCGAGACGATAGAGATGTTGGATATGATAGAGAGAGGTCCAAAGAAAAAGATCCAGCTCCTGACCATGATTGGCCAGATAGAAGGCCACGTGATGATAGAGATATAGGTCGAGAGAGAGACAAGGATCGTGATCGCAATAGGGAACGTTCTCGAGATTATGAGCGTGGCCATGATCGCGACCGTGATAGAGATCGTGATCGTGACCGTGATCGAGATAGGCACAAGGAAGATCGGGACAGATATATAGATCATCATAGGTATAGGGACCGTGCACCCGAGCATGAAGATGAGTGGGAAAGGGGGCGGTCATCAAGGACTCATAGCAAGTCTCGACTGCCACAAGAAGAACAAAGTCGTTCTAGATCTAGGGATGCTGATTATGGGAAAAGACGGCGGCTAACTTCTGAGTAGTTAAATCATTACAAATGCATACTTAAAACTATTTAGACTTCGGCTTTCCATGTTCGTTTGGATTCTCTCTTCGATGTTTTCGGCTCGTTGATTCGCTAATTGCCCATTTCCTTTGCCATCGCTTATCTGACTCCGAATTCCACTGGTTATTTCTTACAACAGGAGCATGTCAAGATTTTCTAGAGAAGACAAAAAAAGCAGTAAGTTAACACGATTCCCTTCTTTCTCCAACTTTTTAAATTAAACGCTAGCGAAATGGTATGTCTCTTTTCGGTATCTACCGTAGTTTAATATGAACGTGCTAACGAAGGAATTGTTTTAAATTGGTTCTCTTTAGAAATGGTTCTATTTACTTATAGTTTCTTTGTTTATGGAATCAATATCATATCATGACGCTCTTTTGTCGATCGCCACACAGATTTTGCATTTCGATTGACATTTATTTAGCTAAGCATCTGTATAGACATGGTATATAGAACGTTGTTTTTGTTTTTCATGCTACTCTAGCCTCAAAATGTTATTATTACTGATATAAATCTCTAGCATTAACATTGTTGCTGATTGGAAGAATCCCTTGTTTTCCTTTGTTTCGTCGTGCCTATAACGACGTCTAATACTAAGGCGTTGATCTAATGGTACGACAGTTGGCTTTGGAGATGGCAGCGAGATCCCTTTAACTTCGTGTAGAGAACCAACCCCAGGCATGGCAGCAGCTATTTGCTCTACTAATTTGATAGTGAAACTCTTGGTTTAAACTCTCTCACGTTTCTTTTGGATTATGTTTCTTGAGACTTGGCACCTGATGATGAAACTGATGTTCTTAGATGTAATGGCTAAACTATTGCTGAAGTCCGTACTGTCTTGATGTTGTTTTTGATATGTAATGGCTTACTATGTTGTTGTTAGAGTAAGTTTCTTAGACCACACGATATCGTGTTCGTAAATTATTCTGTTTTTTGAGCTGTTGTATCATATGTTTGCCCCTCTTTTTACGATATCATGCCTCGGCCTGTTCACTTACGAAGATGTAGAGCTAACGATTCTTTGAAAGCTGTTGTTTCAACCTTCAGAAGTCGTTCGTACTTGACTCGATACACTTGTATGCATGTACTTCTTGACTTGATGGACATGTAATAGCTTACTATGTTGTTAGAGTAAGTATCTTAGATTACACGATATCGTGTTCGTAAATTATTCTGTTTTATGAGCTGTTGTATCATATGTTTGCCCCTCTTCTTACGTTATCACGCCTCGGCCTGTTCGATTACGAAGATGTAGAGCTAATGATTCTTTGAAAGTTGTTGTTTCAAACCTTCGGAGGTCAT

mRNA sequence

ATGGATGAAGGAGAGGGAGGGCTTGGTGTGGGTGCGGATCAGATTGATCAGTTTCATCGGAACGAGGCGATTTCTGCCGTTGCTGATGATGGTTTCTTAGGCGAAGATGAGGATGAATATGAGGACTTGTACAACGATGTTAACGTTGGGGAGGGGTTTCTTCAGTCGTTGAGGAAAAACGATGATTTGGGTTTCAAGAGCGAGGAGGAGCCTAAGATGGAGCCTCCTGCTGCTGTACCACCCACTTCCGGTGCTTCGATACCTGGTTTTGGCGGAGGTACGACTGATGTTCCTGGTTTGGGAGATGGTGGGCACAGTGTTGCGGAAAGAGTAACTGACGGTTACAATCAGATTCCAGATTTAAGAACAAATGAGATGGCTATCAGAGTTGGGGCGGGATCGGGGCCACCTATGGGTGGTGGAGGTGGGATTAGGGTTGAATTAGGACAGGGGAGTAAAACCAATGAGTTGGAGGAGCGAAGTAGTAATAATGTTGCTGCGCATCAGGCTCCGCCACAGCAACAGCCACATCCACAGCAACAGCTACAGCCACCGGCACAGCCACAGCCACTGGCACAGCCACAGCCACAGCACCACCACCAAGCGCAGCAGGGCGGAGTTTTAGGAAATCCAGTGAGCGTAGAAAATGAAGGTTTGCTAAGGCAAGGTGGTGGCGTAAATGTAAATGGGGTTGGTGGAAATGGGTTCGGTAATGTGGGGAATGCAGGGGGAGGTGGAGGTGGAGGTGGAGGTGGAACCATTTTGTTTGTTGGGGATTTACATTGGTGGACTACAGATGCGGAGCTGGAGGTGGAACTCTGTAAGTATGGTCCGTTGAAGGAGGTTAAGTTTTTTGACGAGAAAGCCAGTGGGAAATCAAAAGGCTACTGCCAGGTTGAGTTTTATGATCCTTCTGCTGCCACGGCTTGCAAGGAGGGGATGAACGGGCATATGTTTAATGGACGGCCGTGTGTTGTTGCATATGCATCACCATTTAGTGTGAAGAGAATGGGAGAAGCCCAAGTGAACAGGAACCAACAGATGGCCCAAGCTACTAATCCTCAAGCAAGGAGAGGTCCTAATGATACTGTAGGTAAAATGGGTGGAAGTAGCATTGCGACGGGTGGTAATTATCAAGGTGGTGATAATAACAGAGGTTCTGGGAGAGGTAATTGGGGAAGAGGTAATGCACATGGAATGGGTGGTCGAGGGCCTGCTGGCCCAATGAGGAATAGGGGTGGTGGAATGGGTGGCAGAGGTATAATGGGAAATGGTGGAAATGGTTTTGGTCAAGGAATGGGTGCCACCCCTCCTTTGTTGCATCCGCAGTCAATGATGGGTCAAGGTTTTGATCCATCTTTTGGTGCACCCATGGGAAGAATGGGCACATATGGTGGTTTTCCTGGAGCTCCGGCTCCCCCTTTCTCTGGAATTTTATCATCCTTTCCCCCTGTTGGGGGTGTTGGCCTTCCTGGAGTAGCTCCTCATGTGAACCCAGCATTTTTTGGAAGAGGTATGCCTATGAATGGAATGGGGATGATGCCAACATCGGGTGTTGATGGGCCTAATATGGGAATGTGGTCTGACCCTAGTATGGGGGGATGGGGCAGTGAAGAGCATGGTGGAGGGAGAGCTGGCGAGTCTAGTTATGGAGAAGAAGCTGGGTCTGACCAGCAATATGGTGAAGGTAGTCATGAAAGAGGAGCCTGGGCAAATTCTGCAAAGGAGAAAGATAGAGGATCCGAAAGGGATTGGTCACAGTCTTCTGATAGAAGGTATCGAGATGATAGAGAGAGATCCAAAGAAAAGGATCCGGGGCCTGACCATGATTGGCCAGATAGAAGGCCACGTGATGATAGAGACATAGGTCGTGAAAGGGACAAGGATAGGGATCGGGATCGGGATAAGGAACGATCTCGAGATTATGAGCGGGGCCATCATGATCGTGATCGTGACCGTGACAGGGATCGTGACCGTGATAGGTACAAGGAAGATAGGGACAGATATTCTGATCATCATAGGTACAGAGACCGGGAGCCAGAGCATGACGAGGATTGGGATAGGGGACGGTCGTCAAGGACTCATAGCAAGTCCCGATTACCACAAGAAGAAGAAAATCGTTCTAGAACAAGGGATGCTGATTATGGGAAGAGGCGGAGGCTTACTTCTGACTTAAACGACATTCGATACCGAGGATTTCATTCAGTGGAACAGCAGTTGGTTCGGAGCATGTCAAGATTTTCTAGAGAAGACAAAAAAAGCATTGGCTTTGGAGATGGCAGCGAGATCCCTTTAACTTCGTGTAGAGAACCAACCCCAGGCATGGCAGCAGCTATTTGCTCTACTAATTTGATAGTGAAACTCTTGGTTTAAACTCTCTCACGTTTCTTTTGGATTATGTTTCTTGAGACTTGGCACCTGATGATGAAACTGATGTTCTTAGATGTAATGGCTAAACTATTGCTGAAGTCCGTACTGTCTTGATGTTGTTTTTGATATGTAATGGCTTACTATGTTGTTGTTAGAGTAAGTTTCTTAGACCACACGATATCGTGTTCGTAAATTATTCTGTTTTTTGAGCTGTTGTATCATATGTTTGCCCCTCTTTTTACGATATCATGCCTCGGCCTGTTCACTTACGAAGATGTAGAGCTAACGATTCTTTGAAAGCTGTTGTTTCAACCTTCAGAAGTCGTTCGTACTTGACTCGATACACTTGTATGCATGTACTTCTTGACTTGATGGACATGTAATAGCTTACTATGTTGTTAGAGTAAGTATCTTAGATTACACGATATCGTGTTCGTAAATTATTCTGTTTTATGAGCTGTTGTATCATATGTTTGCCCCTCTTCTTACGTTATCACGCCTCGGCCTGTTCGATTACGAAGATGTAGAGCTAATGATTCTTTGAAAGTTGTTGTTTCAAACCTTCGGAGGTCAT

Coding sequence (CDS)

ATGGATGAAGGAGAGGGAGGGCTTGGTGTGGGTGCGGATCAGATTGATCAGTTTCATCGGAACGAGGCGATTTCTGCCGTTGCTGATGATGGTTTCTTAGGCGAAGATGAGGATGAATATGAGGACTTGTACAACGATGTTAACGTTGGGGAGGGGTTTCTTCAGTCGTTGAGGAAAAACGATGATTTGGGTTTCAAGAGCGAGGAGGAGCCTAAGATGGAGCCTCCTGCTGCTGTACCACCCACTTCCGGTGCTTCGATACCTGGTTTTGGCGGAGGTACGACTGATGTTCCTGGTTTGGGAGATGGTGGGCACAGTGTTGCGGAAAGAGTAACTGACGGTTACAATCAGATTCCAGATTTAAGAACAAATGAGATGGCTATCAGAGTTGGGGCGGGATCGGGGCCACCTATGGGTGGTGGAGGTGGGATTAGGGTTGAATTAGGACAGGGGAGTAAAACCAATGAGTTGGAGGAGCGAAGTAGTAATAATGTTGCTGCGCATCAGGCTCCGCCACAGCAACAGCCACATCCACAGCAACAGCTACAGCCACCGGCACAGCCACAGCCACTGGCACAGCCACAGCCACAGCACCACCACCAAGCGCAGCAGGGCGGAGTTTTAGGAAATCCAGTGAGCGTAGAAAATGAAGGTTTGCTAAGGCAAGGTGGTGGCGTAAATGTAAATGGGGTTGGTGGAAATGGGTTCGGTAATGTGGGGAATGCAGGGGGAGGTGGAGGTGGAGGTGGAGGTGGAACCATTTTGTTTGTTGGGGATTTACATTGGTGGACTACAGATGCGGAGCTGGAGGTGGAACTCTGTAAGTATGGTCCGTTGAAGGAGGTTAAGTTTTTTGACGAGAAAGCCAGTGGGAAATCAAAAGGCTACTGCCAGGTTGAGTTTTATGATCCTTCTGCTGCCACGGCTTGCAAGGAGGGGATGAACGGGCATATGTTTAATGGACGGCCGTGTGTTGTTGCATATGCATCACCATTTAGTGTGAAGAGAATGGGAGAAGCCCAAGTGAACAGGAACCAACAGATGGCCCAAGCTACTAATCCTCAAGCAAGGAGAGGTCCTAATGATACTGTAGGTAAAATGGGTGGAAGTAGCATTGCGACGGGTGGTAATTATCAAGGTGGTGATAATAACAGAGGTTCTGGGAGAGGTAATTGGGGAAGAGGTAATGCACATGGAATGGGTGGTCGAGGGCCTGCTGGCCCAATGAGGAATAGGGGTGGTGGAATGGGTGGCAGAGGTATAATGGGAAATGGTGGAAATGGTTTTGGTCAAGGAATGGGTGCCACCCCTCCTTTGTTGCATCCGCAGTCAATGATGGGTCAAGGTTTTGATCCATCTTTTGGTGCACCCATGGGAAGAATGGGCACATATGGTGGTTTTCCTGGAGCTCCGGCTCCCCCTTTCTCTGGAATTTTATCATCCTTTCCCCCTGTTGGGGGTGTTGGCCTTCCTGGAGTAGCTCCTCATGTGAACCCAGCATTTTTTGGAAGAGGTATGCCTATGAATGGAATGGGGATGATGCCAACATCGGGTGTTGATGGGCCTAATATGGGAATGTGGTCTGACCCTAGTATGGGGGGATGGGGCAGTGAAGAGCATGGTGGAGGGAGAGCTGGCGAGTCTAGTTATGGAGAAGAAGCTGGGTCTGACCAGCAATATGGTGAAGGTAGTCATGAAAGAGGAGCCTGGGCAAATTCTGCAAAGGAGAAAGATAGAGGATCCGAAAGGGATTGGTCACAGTCTTCTGATAGAAGGTATCGAGATGATAGAGAGAGATCCAAAGAAAAGGATCCGGGGCCTGACCATGATTGGCCAGATAGAAGGCCACGTGATGATAGAGACATAGGTCGTGAAAGGGACAAGGATAGGGATCGGGATCGGGATAAGGAACGATCTCGAGATTATGAGCGGGGCCATCATGATCGTGATCGTGACCGTGACAGGGATCGTGACCGTGATAGGTACAAGGAAGATAGGGACAGATATTCTGATCATCATAGGTACAGAGACCGGGAGCCAGAGCATGACGAGGATTGGGATAGGGGACGGTCGTCAAGGACTCATAGCAAGTCCCGATTACCACAAGAAGAAGAAAATCGTTCTAGAACAAGGGATGCTGATTATGGGAAGAGGCGGAGGCTTACTTCTGACTTAAACGACATTCGATACCGAGGATTTCATTCAGTGGAACAGCAGTTGGTTCGGAGCATGTCAAGATTTTCTAGAGAAGACAAAAAAAGCATTGGCTTTGGAGATGGCAGCGAGATCCCTTTAACTTCGTGTAGAGAACCAACCCCAGGCATGGCAGCAGCTATTTGCTCTACTAATTTGATAGTGAAACTCTTGGTTTAA

Protein sequence

MDEGEGGLGVGADQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGFKSEEEPKMEPPAAVPPTSGASIPGFGGGTTDVPGLGDGGHSVAERVTDGYNQIPDLRTNEMAIRVGAGSGPPMGGGGGIRVELGQGSKTNELEERSSNNVAAHQAPPQQQPHPQQQLQPPAQPQPLAQPQPQHHHQAQQGGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNVGNAGGGGGGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVEFYDPSAATACKEGMNGHMFNGRPCVVAYASPFSVKRMGEAQVNRNQQMAQATNPQARRGPNDTVGKMGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRGIMGNGGNGFGQGMGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEHGGGRAGESSYGEEAGSDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDDRERSKEKDPGPDHDWPDRRPRDDRDIGRERDKDRDRDRDKERSRDYERGHHDRDRDRDRDRDRDRYKEDRDRYSDHHRYRDREPEHDEDWDRGRSSRTHSKSRLPQEEENRSRTRDADYGKRRRLTSDLNDIRYRGFHSVEQQLVRSMSRFSREDKKSIGFGDGSEIPLTSCREPTPGMAAAICSTNLIVKLLV

Homology

[Close]

BLAST of Carg12874 vs. NCBI nr
Match: KAG7024972.1 (Nipped-B-like protein B, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1513.0 bits (3916), Expect = 0.0e+00
Identity = 790/790 (100.00%), Postives = 790/790 (100.00%), Query Frame = 0


Query: 1   MDEGEGGLGVGADQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60
           MDEGEGGLGVGADQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN
Sbjct: 1   MDEGEGGLGVGADQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60

Query: 61  DDLGFKSEEEPKMEPPAAVPPTSGASIPGFGGGTTDVPGLGDGGHSVAERVTDGYNQIPD 120
           DDLGFKSEEEPKMEPPAAVPPTSGASIPGFGGGTTDVPGLGDGGHSVAERVTDGYNQIPD
Sbjct: 61  DDLGFKSEEEPKMEPPAAVPPTSGASIPGFGGGTTDVPGLGDGGHSVAERVTDGYNQIPD 120

Query: 121 LRTNEMAIRVGAGSGPPMGGGGGIRVELGQGSKTNELEERSSNNVAAHQAPPQQQPHPQQ 180
           LRTNEMAIRVGAGSGPPMGGGGGIRVELGQGSKTNELEERSSNNVAAHQAPPQQQPHPQQ
Sbjct: 121 LRTNEMAIRVGAGSGPPMGGGGGIRVELGQGSKTNELEERSSNNVAAHQAPPQQQPHPQQ 180

Query: 181 QLQPPAQPQPLAQPQPQHHHQAQQGGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNVG 240
           QLQPPAQPQPLAQPQPQHHHQAQQGGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNVG
Sbjct: 181 QLQPPAQPQPLAQPQPQHHHQAQQGGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNVG 240

Query: 241 NAGGGGGGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVE 300
           NAGGGGGGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVE
Sbjct: 241 NAGGGGGGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVE 300

Query: 301 FYDPSAATACKEGMNGHMFNGRPCVVAYASPFSVKRMGEAQVNRNQQMAQATNPQARRGP 360
           FYDPSAATACKEGMNGHMFNGRPCVVAYASPFSVKRMGEAQVNRNQQMAQATNPQARRGP
Sbjct: 301 FYDPSAATACKEGMNGHMFNGRPCVVAYASPFSVKRMGEAQVNRNQQMAQATNPQARRGP 360

Query: 361 NDTVGKMGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRG 420
           NDTVGKMGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRG
Sbjct: 361 NDTVGKMGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRG 420

Query: 421 IMGNGGNGFGQGMGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILS 480
           IMGNGGNGFGQGMGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILS
Sbjct: 421 IMGNGGNGFGQGMGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILS 480

Query: 481 SFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEH 540
           SFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEH
Sbjct: 481 SFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEH 540

Query: 541 GGGRAGESSYGEEAGSDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDDRERS 600
           GGGRAGESSYGEEAGSDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDDRERS
Sbjct: 541 GGGRAGESSYGEEAGSDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDDRERS 600

Query: 601 KEKDPGPDHDWPDRRPRDDRDIGRERDKDRDRDRDKERSRDYERGHHDRDRDRDRDRDRD 660
           KEKDPGPDHDWPDRRPRDDRDIGRERDKDRDRDRDKERSRDYERGHHDRDRDRDRDRDRD
Sbjct: 601 KEKDPGPDHDWPDRRPRDDRDIGRERDKDRDRDRDKERSRDYERGHHDRDRDRDRDRDRD 660

Query: 661 RYKEDRDRYSDHHRYRDREPEHDEDWDRGRSSRTHSKSRLPQEEENRSRTRDADYGKRRR 720
           RYKEDRDRYSDHHRYRDREPEHDEDWDRGRSSRTHSKSRLPQEEENRSRTRDADYGKRRR
Sbjct: 661 RYKEDRDRYSDHHRYRDREPEHDEDWDRGRSSRTHSKSRLPQEEENRSRTRDADYGKRRR 720

Query: 721 LTSDLNDIRYRGFHSVEQQLVRSMSRFSREDKKSIGFGDGSEIPLTSCREPTPGMAAAIC 780
           LTSDLNDIRYRGFHSVEQQLVRSMSRFSREDKKSIGFGDGSEIPLTSCREPTPGMAAAIC
Sbjct: 721 LTSDLNDIRYRGFHSVEQQLVRSMSRFSREDKKSIGFGDGSEIPLTSCREPTPGMAAAIC 780

Query: 781 STNLIVKLLV 791
           STNLIVKLLV
Sbjct: 781 STNLIVKLLV 790

[Close]

BLAST of Carg12874 vs. NCBI nr
Match: KAG6592096.1 (Nipped-B-like protein B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1382.5 bits (3577), Expect = 0.0e+00
Identity = 722/724 (99.72%), Postives = 724/724 (100.00%), Query Frame = 0


Query: 1   MDEGEGGLGVGADQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60
           MDEGEGGLGVGADQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN
Sbjct: 1   MDEGEGGLGVGADQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60

Query: 61  DDLGFKSEEEPKMEPPAAVPPTSGASIPGFGGGTTDVPGLGDGGHSVAERVTDGYNQIPD 120
           DDLGFKSEEEPKMEPPAAVPPTSGASIPGFGGGTTDVPGLGDGGHSVAERVTDGYNQIPD
Sbjct: 61  DDLGFKSEEEPKMEPPAAVPPTSGASIPGFGGGTTDVPGLGDGGHSVAERVTDGYNQIPD 120

Query: 121 LRTNEMAIRVGAGSGPPMGGGGGIRVELGQGSKTNELEERSSNNVAAHQAPPQQQPHPQQ 180
           LRTNEMAIRVGAGSGPPMGGGGGIRVELGQGSKTNELEERSSNNVAAHQAPPQQQPHPQQ
Sbjct: 121 LRTNEMAIRVGAGSGPPMGGGGGIRVELGQGSKTNELEERSSNNVAAHQAPPQQQPHPQQ 180

Query: 181 QLQPPAQPQPLAQPQPQHHHQAQQGGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNVG 240
           QLQPPAQPQPLAQPQPQHHHQAQQGGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNVG
Sbjct: 181 QLQPPAQPQPLAQPQPQHHHQAQQGGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNVG 240

Query: 241 NAGGGGGGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVE 300
           NAGGGGGGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVE
Sbjct: 241 NAGGGGGGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVE 300

Query: 301 FYDPSAATACKEGMNGHMFNGRPCVVAYASPFSVKRMGEAQVNRNQQMAQATNPQARRGP 360
           FYDPSAATACKEGMNGHMFNGRPCVVAYASPFSVKRMGEAQVNRNQQMAQATNPQARRGP
Sbjct: 301 FYDPSAATACKEGMNGHMFNGRPCVVAYASPFSVKRMGEAQVNRNQQMAQATNPQARRGP 360

Query: 361 NDTVGKMGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRG 420
           NDTVGKMGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRG
Sbjct: 361 NDTVGKMGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRG 420

Query: 421 IMGNGGNGFGQGMGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILS 480
           IMGNGGNGFGQGMGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILS
Sbjct: 421 IMGNGGNGFGQGMGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILS 480

Query: 481 SFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEH 540
           SFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEH
Sbjct: 481 SFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEH 540

Query: 541 GGGRAGESSYGEEAGSDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDDRERS 600
           GGGRAGESSYGEEAGSDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDR+YRDDRERS
Sbjct: 541 GGGRAGESSYGEEAGSDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRKYRDDRERS 600

Query: 601 KEKDPGPDHDWPDRRPRDDRDIGRERDKDRDRDRDKERSRDYERGHHDRDRDRDRDRDRD 660
           KEKDPGPDHDWPDRRPRDDRDIGRERDKDRDRDRDKERSRDYERGHHDRDRDRDRDRDRD
Sbjct: 601 KEKDPGPDHDWPDRRPRDDRDIGRERDKDRDRDRDKERSRDYERGHHDRDRDRDRDRDRD 660

Query: 661 RYKEDRDRYSDHHRYRDREPEHDEDWDRGRSSRTHSKSRLPQEEENRSRTRDADYGKRRR 720
           RYKEDRDRYSDHHRYRDREPEHDEDWDRGRSSRTHSKSRLPQEEENRSRTRDADYGKRRR
Sbjct: 661 RYKEDRDRYSDHHRYRDREPEHDEDWDRGRSSRTHSKSRLPQEEENRSRTRDADYGKRRR 720

Query: 721 LTSD 725
           LTS+
Sbjct: 721 LTSE 724

[Close]

BLAST of Carg12874 vs. NCBI nr
Match: XP_022936014.1 (cleavage and polyadenylation specificity factor subunit CG7185-like [Cucurbita moschata] >XP_022936015.1 cleavage and polyadenylation specificity factor subunit CG7185-like [Cucurbita moschata])

HSP 1 Score: 1364.4 bits (3530), Expect = 0.0e+00
Identity = 715/724 (98.76%), Postives = 718/724 (99.17%), Query Frame = 0


Query: 1   MDEGEGGLGVGADQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60
           MDEGEGGLGVGADQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN
Sbjct: 1   MDEGEGGLGVGADQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60

Query: 61  DDLGFKSEEEPKMEPPAAVPPTSGASIPGFGGGTTDVPGLGDGGHSVAERVTDGYNQIPD 120
           DDLGFKSEEEPKMEPPAAVPPTSGASIPGFGGGTTDVPGLGDGGHSVAERVT+GYNQIPD
Sbjct: 61  DDLGFKSEEEPKMEPPAAVPPTSGASIPGFGGGTTDVPGLGDGGHSVAERVTEGYNQIPD 120

Query: 121 LRTNEMAIRVGAGSGPPMGGGGGIRVELGQGSKTNELEERSSNNVAAHQAPPQQQPHPQQ 180
           LRTNEMAIRVGAGSGPPMGGGGGIRVELGQGSKTNELEERSSNNVAAHQAPPQQQP P Q
Sbjct: 121 LRTNEMAIRVGAGSGPPMGGGGGIRVELGQGSKTNELEERSSNNVAAHQAPPQQQPQPLQ 180

Query: 181 QLQPPAQPQPLAQPQPQHHHQAQQGGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNVG 240
           QLQPPAQPQP  Q Q QHHHQAQQGGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNVG
Sbjct: 181 QLQPPAQPQPQPQQQTQHHHQAQQGGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNVG 240

Query: 241 NAGGGGGGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVE 300
           NAGGGGGGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVE
Sbjct: 241 NAGGGGGGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVE 300

Query: 301 FYDPSAATACKEGMNGHMFNGRPCVVAYASPFSVKRMGEAQVNRNQQMAQATNPQARRGP 360
           FYDPSAATACKEGMNGHMFNGRPCVVAYASPFSVKRMGEAQVNRNQQMAQATNPQARRGP
Sbjct: 301 FYDPSAATACKEGMNGHMFNGRPCVVAYASPFSVKRMGEAQVNRNQQMAQATNPQARRGP 360

Query: 361 NDTVGKMGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRG 420
           NDTVGKMGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRG
Sbjct: 361 NDTVGKMGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRG 420

Query: 421 IMGNGGNGFGQGMGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILS 480
           IMGNGGNGFGQGMGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILS
Sbjct: 421 IMGNGGNGFGQGMGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILS 480

Query: 481 SFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEH 540
           SFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEH
Sbjct: 481 SFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEH 540

Query: 541 GGGRAGESSYGEEAGSDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDDRERS 600
           GGGRAGESSYGEEAGSDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDDRERS
Sbjct: 541 GGGRAGESSYGEEAGSDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDDRERS 600

Query: 601 KEKDPGPDHDWPDRRPRDDRDIGRERDKDRDRDRDKERSRDYERGHHDRDRDRDRDRDRD 660
           KEKDPGPDHDWPDRRPRDDRDIGRERDKDRDRDRDKERSRDYERGHHDRDRDRDRDRDRD
Sbjct: 601 KEKDPGPDHDWPDRRPRDDRDIGRERDKDRDRDRDKERSRDYERGHHDRDRDRDRDRDRD 660

Query: 661 RYKEDRDRYSDHHRYRDREPEHDEDWDRGRSSRTHSKSRLPQEEENRSRTRDADYGKRRR 720
           RYKEDRDRYSDHHRYRDREPEHDEDW+RGRSSRTHSKSRLPQEEENRSRTRDADYGKRRR
Sbjct: 661 RYKEDRDRYSDHHRYRDREPEHDEDWERGRSSRTHSKSRLPQEEENRSRTRDADYGKRRR 720

Query: 721 LTSD 725
           LTS+
Sbjct: 721 LTSE 724

[Close]

BLAST of Carg12874 vs. NCBI nr
Match: XP_023535463.1 (cleavage and polyadenylation specificity factor subunit 6-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1355.9 bits (3508), Expect = 0.0e+00
Identity = 713/724 (98.48%), Postives = 717/724 (99.03%), Query Frame = 0


Query: 1   MDEGEGGLGVGADQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60
           MDEGEGGLGVGADQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN
Sbjct: 1   MDEGEGGLGVGADQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60

Query: 61  DDLGFKSEEEPKMEPPAAVPPTSGASIPGFGGGTTDVPGLGDGGHSVAERVTDGYNQIPD 120
           DDLGFKSEEEPKMEPPAAVPPTSGASIPGFGGGTTDVPGLGDGGHSVAERVT+GYNQIPD
Sbjct: 61  DDLGFKSEEEPKMEPPAAVPPTSGASIPGFGGGTTDVPGLGDGGHSVAERVTEGYNQIPD 120

Query: 121 LRTNEMAIRVGAGSGPPMGGGGGIRVELGQGSKTNELEERSSNNVAAHQAPPQQQPHPQQ 180
           LRTNEMAIRVGAGSGPPMGGGGGIRVELGQGSKTNELEERSSNNVAAHQAP Q QP PQQ
Sbjct: 121 LRTNEMAIRVGAGSGPPMGGGGGIRVELGQGSKTNELEERSSNNVAAHQAPQQPQPQPQQ 180

Query: 181 QLQPPAQPQPLAQPQPQHHHQAQQGGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNVG 240
           QLQPPAQPQP  Q Q QHHHQAQQGGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNVG
Sbjct: 181 QLQPPAQPQP--QQQTQHHHQAQQGGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNVG 240

Query: 241 NAGGGGGGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVE 300
           NAGGGGGGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVE
Sbjct: 241 NAGGGGGGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVE 300

Query: 301 FYDPSAATACKEGMNGHMFNGRPCVVAYASPFSVKRMGEAQVNRNQQMAQATNPQARRGP 360
           FYDPSAATACKEGMNGHMFNGRPCVVAYASPFSVKRMGEAQVNRNQQMAQATNPQARRGP
Sbjct: 301 FYDPSAATACKEGMNGHMFNGRPCVVAYASPFSVKRMGEAQVNRNQQMAQATNPQARRGP 360

Query: 361 NDTVGKMGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRG 420
           NDTVGKMGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRG
Sbjct: 361 NDTVGKMGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRG 420

Query: 421 IMGNGGNGFGQGMGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILS 480
           IMGNGGNGFGQGMGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILS
Sbjct: 421 IMGNGGNGFGQGMGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILS 480

Query: 481 SFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEH 540
           SFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEH
Sbjct: 481 SFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEH 540

Query: 541 GGGRAGESSYGEEAGSDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDDRERS 600
           GGGRAGESSYGEEAGSDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDDRERS
Sbjct: 541 GGGRAGESSYGEEAGSDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDDRERS 600

Query: 601 KEKDPGPDHDWPDRRPRDDRDIGRERDKDRDRDRDKERSRDYERGHHDRDRDRDRDRDRD 660
           KEKDPGPDHDWPDRRPRDDRDIGRER+KDRDRDRDKERSRDYERGHHDRDRDRDRDRDRD
Sbjct: 601 KEKDPGPDHDWPDRRPRDDRDIGREREKDRDRDRDKERSRDYERGHHDRDRDRDRDRDRD 660

Query: 661 RYKEDRDRYSDHHRYRDREPEHDEDWDRGRSSRTHSKSRLPQEEENRSRTRDADYGKRRR 720
           RYKEDRDRYSDHHRYRDREPEHDEDW+RGRSSRTHSKSRLPQEEENRSRTRDADYGKRRR
Sbjct: 661 RYKEDRDRYSDHHRYRDREPEHDEDWERGRSSRTHSKSRLPQEEENRSRTRDADYGKRRR 720

Query: 721 LTSD 725
           LTS+
Sbjct: 721 LTSE 722

[Close]

BLAST of Carg12874 vs. NCBI nr
Match: XP_022975849.1 (cleavage and polyadenylation specificity factor subunit 6-like [Cucurbita maxima])

HSP 1 Score: 1350.5 bits (3494), Expect = 0.0e+00
Identity = 711/724 (98.20%), Postives = 716/724 (98.90%), Query Frame = 0


Query: 1   MDEGEGGLGVGADQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60
           MDEGEGGLGVGADQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN
Sbjct: 1   MDEGEGGLGVGADQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60

Query: 61  DDLGFKSEEEPKMEPPAAVPPTSGASIPGFGGGTTDVPGLGDGGHSVAERVTDGYNQIPD 120
           DDLGFKSEEEPKMEPPAAVPPTSGASIPGFGGGTTDVPGLGDGGHSVAERVT+GYNQIPD
Sbjct: 61  DDLGFKSEEEPKMEPPAAVPPTSGASIPGFGGGTTDVPGLGDGGHSVAERVTEGYNQIPD 120

Query: 121 LRTNEMAIRVGAGSGPPMGGGGGIRVELGQGSKTNELEERSSNNVAAHQAPPQQQPHPQQ 180
           LR NEMAIRVGAGSGPP+GGGGGIRVELGQGSKTNELEERSSNNVAAHQAP QQQP PQQ
Sbjct: 121 LRANEMAIRVGAGSGPPIGGGGGIRVELGQGSKTNELEERSSNNVAAHQAPQQQQPQPQQ 180

Query: 181 QLQPPAQPQPLAQPQPQHHHQAQQGGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNVG 240
           QLQPPAQPQP  Q Q QHHHQAQQGGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNVG
Sbjct: 181 QLQPPAQPQP--QQQTQHHHQAQQGGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNVG 240

Query: 241 NAGGGGGGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVE 300
           +AGGGGGGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVE
Sbjct: 241 SAGGGGGGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVE 300

Query: 301 FYDPSAATACKEGMNGHMFNGRPCVVAYASPFSVKRMGEAQVNRNQQMAQATNPQARRGP 360
           FYDPSAATACKEGMNGHMFNGRPCVVAYASPFSVKRMGEAQVNRNQQMAQATNPQARRGP
Sbjct: 301 FYDPSAATACKEGMNGHMFNGRPCVVAYASPFSVKRMGEAQVNRNQQMAQATNPQARRGP 360

Query: 361 NDTVGKMGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRG 420
           NDTVGKMGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRG
Sbjct: 361 NDTVGKMGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRG 420

Query: 421 IMGNGGNGFGQGMGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILS 480
           IMGNGGNGFGQGMGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILS
Sbjct: 421 IMGNGGNGFGQGMGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILS 480

Query: 481 SFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEH 540
           SFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEH
Sbjct: 481 SFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEH 540

Query: 541 GGGRAGESSYGEEAGSDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDDRERS 600
           GGGRAGESSYGEEAGSDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDDRERS
Sbjct: 541 GGGRAGESSYGEEAGSDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDDRERS 600

Query: 601 KEKDPGPDHDWPDRRPRDDRDIGRERDKDRDRDRDKERSRDYERGHHDRDRDRDRDRDRD 660
           KEKD GPDHDWPDRRPRDDRDIGRERDKDRDRDRDKERSRDYERGHHDRDRDRDRDRDRD
Sbjct: 601 KEKDLGPDHDWPDRRPRDDRDIGRERDKDRDRDRDKERSRDYERGHHDRDRDRDRDRDRD 660

Query: 661 RYKEDRDRYSDHHRYRDREPEHDEDWDRGRSSRTHSKSRLPQEEENRSRTRDADYGKRRR 720
           RYKEDRDRYSDHHRYRDREPEHDEDW+RGRSSRTHSKSRLPQEEENRSRTRDADYGKRRR
Sbjct: 661 RYKEDRDRYSDHHRYRDREPEHDEDWERGRSSRTHSKSRLPQEEENRSRTRDADYGKRRR 720

Query: 721 LTSD 725
           LTS+
Sbjct: 721 LTSE 722

[Close]

BLAST of Carg12874 vs. ExPASy TrEMBL
Match: A0A6J1F726 (cleavage and polyadenylation specificity factor subunit CG7185-like OS=Cucurbita moschata OX=3662 GN=LOC111442737 PE=4 SV=1)

HSP 1 Score: 1364.4 bits (3530), Expect = 0.0e+00
Identity = 715/724 (98.76%), Postives = 718/724 (99.17%), Query Frame = 0


Query: 1   MDEGEGGLGVGADQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60
           MDEGEGGLGVGADQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN
Sbjct: 1   MDEGEGGLGVGADQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60

Query: 61  DDLGFKSEEEPKMEPPAAVPPTSGASIPGFGGGTTDVPGLGDGGHSVAERVTDGYNQIPD 120
           DDLGFKSEEEPKMEPPAAVPPTSGASIPGFGGGTTDVPGLGDGGHSVAERVT+GYNQIPD
Sbjct: 61  DDLGFKSEEEPKMEPPAAVPPTSGASIPGFGGGTTDVPGLGDGGHSVAERVTEGYNQIPD 120

Query: 121 LRTNEMAIRVGAGSGPPMGGGGGIRVELGQGSKTNELEERSSNNVAAHQAPPQQQPHPQQ 180
           LRTNEMAIRVGAGSGPPMGGGGGIRVELGQGSKTNELEERSSNNVAAHQAPPQQQP P Q
Sbjct: 121 LRTNEMAIRVGAGSGPPMGGGGGIRVELGQGSKTNELEERSSNNVAAHQAPPQQQPQPLQ 180

Query: 181 QLQPPAQPQPLAQPQPQHHHQAQQGGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNVG 240
           QLQPPAQPQP  Q Q QHHHQAQQGGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNVG
Sbjct: 181 QLQPPAQPQPQPQQQTQHHHQAQQGGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNVG 240

Query: 241 NAGGGGGGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVE 300
           NAGGGGGGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVE
Sbjct: 241 NAGGGGGGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVE 300

Query: 301 FYDPSAATACKEGMNGHMFNGRPCVVAYASPFSVKRMGEAQVNRNQQMAQATNPQARRGP 360
           FYDPSAATACKEGMNGHMFNGRPCVVAYASPFSVKRMGEAQVNRNQQMAQATNPQARRGP
Sbjct: 301 FYDPSAATACKEGMNGHMFNGRPCVVAYASPFSVKRMGEAQVNRNQQMAQATNPQARRGP 360

Query: 361 NDTVGKMGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRG 420
           NDTVGKMGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRG
Sbjct: 361 NDTVGKMGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRG 420

Query: 421 IMGNGGNGFGQGMGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILS 480
           IMGNGGNGFGQGMGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILS
Sbjct: 421 IMGNGGNGFGQGMGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILS 480

Query: 481 SFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEH 540
           SFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEH
Sbjct: 481 SFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEH 540

Query: 541 GGGRAGESSYGEEAGSDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDDRERS 600
           GGGRAGESSYGEEAGSDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDDRERS
Sbjct: 541 GGGRAGESSYGEEAGSDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDDRERS 600

Query: 601 KEKDPGPDHDWPDRRPRDDRDIGRERDKDRDRDRDKERSRDYERGHHDRDRDRDRDRDRD 660
           KEKDPGPDHDWPDRRPRDDRDIGRERDKDRDRDRDKERSRDYERGHHDRDRDRDRDRDRD
Sbjct: 601 KEKDPGPDHDWPDRRPRDDRDIGRERDKDRDRDRDKERSRDYERGHHDRDRDRDRDRDRD 660

Query: 661 RYKEDRDRYSDHHRYRDREPEHDEDWDRGRSSRTHSKSRLPQEEENRSRTRDADYGKRRR 720
           RYKEDRDRYSDHHRYRDREPEHDEDW+RGRSSRTHSKSRLPQEEENRSRTRDADYGKRRR
Sbjct: 661 RYKEDRDRYSDHHRYRDREPEHDEDWERGRSSRTHSKSRLPQEEENRSRTRDADYGKRRR 720

Query: 721 LTSD 725
           LTS+
Sbjct: 721 LTSE 724

[Close]

BLAST of Carg12874 vs. ExPASy TrEMBL
Match: A0A6J1ILS2 (cleavage and polyadenylation specificity factor subunit 6-like OS=Cucurbita maxima OX=3661 GN=LOC111476425 PE=4 SV=1)

HSP 1 Score: 1350.5 bits (3494), Expect = 0.0e+00
Identity = 711/724 (98.20%), Postives = 716/724 (98.90%), Query Frame = 0


Query: 1   MDEGEGGLGVGADQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60
           MDEGEGGLGVGADQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN
Sbjct: 1   MDEGEGGLGVGADQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60

Query: 61  DDLGFKSEEEPKMEPPAAVPPTSGASIPGFGGGTTDVPGLGDGGHSVAERVTDGYNQIPD 120
           DDLGFKSEEEPKMEPPAAVPPTSGASIPGFGGGTTDVPGLGDGGHSVAERVT+GYNQIPD
Sbjct: 61  DDLGFKSEEEPKMEPPAAVPPTSGASIPGFGGGTTDVPGLGDGGHSVAERVTEGYNQIPD 120

Query: 121 LRTNEMAIRVGAGSGPPMGGGGGIRVELGQGSKTNELEERSSNNVAAHQAPPQQQPHPQQ 180
           LR NEMAIRVGAGSGPP+GGGGGIRVELGQGSKTNELEERSSNNVAAHQAP QQQP PQQ
Sbjct: 121 LRANEMAIRVGAGSGPPIGGGGGIRVELGQGSKTNELEERSSNNVAAHQAPQQQQPQPQQ 180

Query: 181 QLQPPAQPQPLAQPQPQHHHQAQQGGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNVG 240
           QLQPPAQPQP  Q Q QHHHQAQQGGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNVG
Sbjct: 181 QLQPPAQPQP--QQQTQHHHQAQQGGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNVG 240

Query: 241 NAGGGGGGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVE 300
           +AGGGGGGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVE
Sbjct: 241 SAGGGGGGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVE 300

Query: 301 FYDPSAATACKEGMNGHMFNGRPCVVAYASPFSVKRMGEAQVNRNQQMAQATNPQARRGP 360
           FYDPSAATACKEGMNGHMFNGRPCVVAYASPFSVKRMGEAQVNRNQQMAQATNPQARRGP
Sbjct: 301 FYDPSAATACKEGMNGHMFNGRPCVVAYASPFSVKRMGEAQVNRNQQMAQATNPQARRGP 360

Query: 361 NDTVGKMGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRG 420
           NDTVGKMGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRG
Sbjct: 361 NDTVGKMGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRG 420

Query: 421 IMGNGGNGFGQGMGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILS 480
           IMGNGGNGFGQGMGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILS
Sbjct: 421 IMGNGGNGFGQGMGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILS 480

Query: 481 SFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEH 540
           SFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEH
Sbjct: 481 SFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEH 540

Query: 541 GGGRAGESSYGEEAGSDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDDRERS 600
           GGGRAGESSYGEEAGSDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDDRERS
Sbjct: 541 GGGRAGESSYGEEAGSDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDDRERS 600

Query: 601 KEKDPGPDHDWPDRRPRDDRDIGRERDKDRDRDRDKERSRDYERGHHDRDRDRDRDRDRD 660
           KEKD GPDHDWPDRRPRDDRDIGRERDKDRDRDRDKERSRDYERGHHDRDRDRDRDRDRD
Sbjct: 601 KEKDLGPDHDWPDRRPRDDRDIGRERDKDRDRDRDKERSRDYERGHHDRDRDRDRDRDRD 660

Query: 661 RYKEDRDRYSDHHRYRDREPEHDEDWDRGRSSRTHSKSRLPQEEENRSRTRDADYGKRRR 720
           RYKEDRDRYSDHHRYRDREPEHDEDW+RGRSSRTHSKSRLPQEEENRSRTRDADYGKRRR
Sbjct: 661 RYKEDRDRYSDHHRYRDREPEHDEDWERGRSSRTHSKSRLPQEEENRSRTRDADYGKRRR 720

Query: 721 LTSD 725
           LTS+
Sbjct: 721 LTSE 722

[Close]

BLAST of Carg12874 vs. ExPASy TrEMBL
Match: A0A5D3CC60 (Cleavage and polyadenylation specificity factor subunit 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00770 PE=4 SV=1)

HSP 1 Score: 1219.1 bits (3153), Expect = 0.0e+00
Identity = 655/733 (89.36%), Postives = 680/733 (92.77%), Query Frame = 0


Query: 1   MDEGEGGLGVGADQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60
           MDEGEGG G G DQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN
Sbjct: 1   MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60

Query: 61  DDLGFKSEEEPKMEPPAAVPPTSGASIPGFGGGTTDVPGLGD-GGHSVAERVTDGYNQIP 120
           D LGFK EEEPKMEPPA VPPTSGASIPG GGG T+V GLGD GGH+V+ERVT+GYNQIP
Sbjct: 61  DGLGFKREEEPKMEPPAPVPPTSGASIPGIGGGATEVTGLGDAGGHTVSERVTEGYNQIP 120

Query: 121 DLRTNEMAIRVGAGSGPPMGGGGGIRVELGQGSKTNELEERSSNNVAAHQAPPQQQPHPQ 180
           DLRTNEMAIR GAGSGPP+GGG GIRVELGQGSK  ELEERSSNNVA HQAP  QQP   
Sbjct: 121 DLRTNEMAIRGGAGSGPPVGGGVGIRVELGQGSKPIELEERSSNNVAGHQAP--QQP--- 180

Query: 181 QQLQPPAQPQPLAQPQPQHHHQAQQGGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNV 240
            QLQP        QPQPQHHHQ  Q GVLGNP SVENEGLLRQGGGVNVNGVGGNGFGNV
Sbjct: 181 -QLQP--------QPQPQHHHQPPQSGVLGNPGSVENEGLLRQGGGVNVNGVGGNGFGNV 240

Query: 241 GNAGGGGGGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQV 300
           G+A    GGG GGT+LFVGDLHWWTTDAELEVELCKYGPLKEVKF+DEKASGKSKGYCQV
Sbjct: 241 GSA----GGGSGGTVLFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQV 300

Query: 301 EFYDPSAATACKEGMNGHMFNGRPCVVAYASPFSVKRMGEAQVNRNQQMAQATNPQARRG 360
           EFYDPSAATACKEGMNGH+FNGRPCVVAYASPFSVK+MGEAQVNRNQQ+AQATNPQARR 
Sbjct: 301 EFYDPSAATACKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQVNRNQQIAQATNPQARRA 360

Query: 361 PNDTVGKMGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGR 420
           PND VGK+GGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMR RGGG+GGR
Sbjct: 361 PNDAVGKIGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRGRGGGIGGR 420

Query: 421 GIMGNGGNGFGQGMGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGIL 480
           GIMGNGGNGFGQG+GATPPLLHPQSMMGQGFDPSFGAP+GRMGTYGGFPGAPAPPFSGIL
Sbjct: 421 GIMGNGGNGFGQGIGATPPLLHPQSMMGQGFDPSFGAPIGRMGTYGGFPGAPAPPFSGIL 480

Query: 481 SSFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEE 540
           SSFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEE
Sbjct: 481 SSFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEE 540

Query: 541 HGGGRAGESSYGEEAGSDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRD---- 600
            GGGRAGESSYGEEAGSDQ YGEGSHERG WANSAKEKDRGSERDWSQSSDRRYRD    
Sbjct: 541 QGGGRAGESSYGEEAGSDQHYGEGSHERGPWANSAKEKDRGSERDWSQSSDRRYRDDRDV 600

Query: 601 --DRERSKEKDPGPDHDWPDRRPRDDRDIGRERDKDRDRDRDKERSRDYERGHHDRDRDR 660
             DRERSKEKDPGPDHDWPDRRPRDDRDIGRERDKDRDRDRD+ERSRDYERGHH+RDR+R
Sbjct: 601 GYDRERSKEKDPGPDHDWPDRRPRDDRDIGRERDKDRDRDRDRERSRDYERGHHERDRER 660

Query: 661 DRDRDRDRYKEDRDRYSDHHRYRDREPEHDEDWDRGRSSRT--HSKSRLPQEEENRSRTR 720
           +RDRDRDRYK+DR+RYSDHHRYRDREPEHDEDW+RGRSSRT  HSKSRL QEEE+RSR+R
Sbjct: 661 ERDRDRDRYKDDRERYSDHHRYRDREPEHDEDWERGRSSRTHSHSKSRLSQEEESRSRSR 715

Query: 721 DADYGKRRRLTSD 725
           DADYGKRRRLTS+
Sbjct: 721 DADYGKRRRLTSE 715

[Close]

BLAST of Carg12874 vs. ExPASy TrEMBL
Match: A0A0A0K3G6 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G104800 PE=4 SV=1)

HSP 1 Score: 1210.7 bits (3131), Expect = 0.0e+00
Identity = 644/731 (88.10%), Postives = 673/731 (92.07%), Query Frame = 0


Query: 1   MDEGEGGLGVGADQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60
           MDEGEGG G G DQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRK+
Sbjct: 1   MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKS 60

Query: 61  DDLGFKSEEEPKMEPPAAVPPTSGASIPGFGGGTTDVPGLGD-GGHSVAERVTDGYNQIP 120
           DDLGFK EEEPKMEPPA VPP+S ASIPG GGG T+V GLGD GG +V+ERVT+GYNQIP
Sbjct: 61  DDLGFKREEEPKMEPPAPVPPSSAASIPGIGGGATEVTGLGDAGGRTVSERVTEGYNQIP 120

Query: 121 DLRTNEMAIRVGAGSGPPMGGGGGIRVELGQGSKTNELEERSSNNVAAHQAPPQQQPHPQ 180
           DLRTNEMAIR G GSGPP+G G GIRVELGQGSK  ELEERSSNNVA HQAPPQ QP P 
Sbjct: 121 DLRTNEMAIRGGVGSGPPVGTGVGIRVELGQGSKAIELEERSSNNVAGHQAPPQPQPQP- 180

Query: 181 QQLQPPAQPQPLAQPQPQHHHQAQQGGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNV 240
                        QPQPQHHHQ  Q GVLGNP SVENEGLLRQGGGVNVNGVGGNGFGN+
Sbjct: 181 -------------QPQPQHHHQPPQSGVLGNPGSVENEGLLRQGGGVNVNGVGGNGFGNI 240

Query: 241 GNAGGGGGGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQV 300
           G+A    GGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKF+DEKASGKSKGYCQV
Sbjct: 241 GSA----GGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQV 300

Query: 301 EFYDPSAATACKEGMNGHMFNGRPCVVAYASPFSVKRMGEAQVNRNQQMAQATNPQARRG 360
           EFYD SAATACKEGMNGH+FNGRPCVVAYASPFSVK+MGEAQV+RNQQ+AQATNPQARR 
Sbjct: 301 EFYDSSAATACKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQVSRNQQIAQATNPQARRA 360

Query: 361 PNDTVGKMGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGR 420
           PN+ VGK+GG+SIATGGNYQGGDNNRGSGRGNWGR NAHGMGGRGPAG MR RGGGMGGR
Sbjct: 361 PNEAVGKIGGNSIATGGNYQGGDNNRGSGRGNWGRSNAHGMGGRGPAGQMRGRGGGMGGR 420

Query: 421 GIMGNGGNGFGQGMGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGIL 480
           GIMGNGGNGFGQG+GATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGIL
Sbjct: 421 GIMGNGGNGFGQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGIL 480

Query: 481 SSFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEE 540
           SSFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEE
Sbjct: 481 SSFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEE 540

Query: 541 HGGGRAGESSYGEEAGSDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRD---- 600
            GGGRAGESSYGEEAGSDQ YGEGSHERG WANSAKEKDRGSERDWSQSSDRRYRD    
Sbjct: 541 QGGGRAGESSYGEEAGSDQHYGEGSHERGPWANSAKEKDRGSERDWSQSSDRRYRDDRDV 600

Query: 601 --DRERSKEKDPGPDHDWPDRRPRDDRDIGRERDKDRDRDRDKERSRDYERGHHDRDRDR 660
             DRERSKEKDPGPDHDWPDRRPR+DRDIGRERDKDRDR+RD+ERSRDYERGHH+RDR+R
Sbjct: 601 GYDRERSKEKDPGPDHDWPDRRPREDRDIGRERDKDRDRERDRERSRDYERGHHERDRER 660

Query: 661 DRDRDRDRYKEDRDRYSDHHRYRDREPEHDEDWDRGRSSRTHSKSRLPQEEENRSRTRDA 720
           +RDRDRDRYK+DRD+YSDHHRYRDREPEHDEDW+RGRSSRTHSKSRL QEEENRSR+RDA
Sbjct: 661 ERDRDRDRYKDDRDKYSDHHRYRDREPEHDEDWERGRSSRTHSKSRLSQEEENRSRSRDA 713

Query: 721 DYGKRRRLTSD 725
           DYGKRRRLTS+
Sbjct: 721 DYGKRRRLTSE 713

[Close]

BLAST of Carg12874 vs. ExPASy TrEMBL
Match: A0A6J1CCR1 (cleavage and polyadenylation specificity factor subunit 6 OS=Momordica charantia OX=3673 GN=LOC111010455 PE=4 SV=1)

HSP 1 Score: 1206.0 bits (3119), Expect = 0.0e+00
Identity = 646/725 (89.10%), Postives = 675/725 (93.10%), Query Frame = 0


Query: 1   MDEGEGGLGVGADQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60
           MDEGEGG G G DQIDQFHRNEAISAVAD+GFLGEDEDEYEDLYNDVNVGEGFLQSLRKN
Sbjct: 1   MDEGEGGFGEGVDQIDQFHRNEAISAVADEGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60

Query: 61  DDLGFKSEEE-PKMEPPAAVPPTSGASIPGFGGGTTDVPGLGDGGHSVAERVTDGYNQIP 120
           DDLGF++EEE PK+EPPA + P+SGASIPG GGG T+V  LGDGGHSV ERVT+GYNQIP
Sbjct: 61  DDLGFRNEEEPPKIEPPATLAPSSGASIPGVGGGATEVASLGDGGHSVPERVTEGYNQIP 120

Query: 121 DLRTNEMAIRVGAGSGPPMGGGGGIRVELGQGSKTNELEERSSNNVAAHQAPPQQQPHPQ 180
           DLRTNEMA+R GAGSGPPMGGGGGIRVELGQGSKTNELEERSSNNVA HQAP Q QP PQ
Sbjct: 121 DLRTNEMAMRGGAGSGPPMGGGGGIRVELGQGSKTNELEERSSNNVAVHQAPQQPQPQPQ 180

Query: 181 QQLQPPAQPQPLAQPQPQHHHQAQQGGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNV 240
           QQ Q   QPQ       QHHHQ    GVLGNP SVEN+GLLRQ GGVNVNGVGGNG+GN+
Sbjct: 181 QQ-QQQQQPQ-------QHHHQPLHSGVLGNPGSVENDGLLRQ-GGVNVNGVGGNGYGNM 240

Query: 241 GNAGGGGGGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQV 300
           G+A    GGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQV
Sbjct: 241 GSA----GGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQV 300

Query: 301 EFYDPSAATACKEGMNGHMFNGRPCVVAYASPFSVKRMGEAQVNRNQQMAQATNPQARRG 360
           EFYDPSAATACKEGMNGH+FNGRPCVVA+ASPFSVK+MGEAQVNRNQQ+AQA NPQARRG
Sbjct: 301 EFYDPSAATACKEGMNGHVFNGRPCVVAFASPFSVKKMGEAQVNRNQQIAQAANPQARRG 360

Query: 361 PNDTVGKMGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGR 420
           PND VGK+GGS+I TGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGR
Sbjct: 361 PNDAVGKIGGSNIQTGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGR 420

Query: 421 GIMGNGGNGFGQGMGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGIL 480
           GIMGNGGNGFGQG+GATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGIL
Sbjct: 421 GIMGNGGNGFGQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGIL 480

Query: 481 SSFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEE 540
           SSFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMM  SGVDGPNMGMWSDPSMGGWGSEE
Sbjct: 481 SSFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMAPSGVDGPNMGMWSDPSMGGWGSEE 540

Query: 541 HGGGRAGESSYGEEAGSDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDDRER 600
           HGGGRAGESSYGEEAGSDQQYGEGSH+RG WANSAKEKDRGSERDWSQSSDRRYRDDRER
Sbjct: 541 HGGGRAGESSYGEEAGSDQQYGEGSHDRGGWANSAKEKDRGSERDWSQSSDRRYRDDRER 600

Query: 601 SKEKDPGPDHDWPDRRPRDDRDIGRERDKDRDRDRDKERSRDYERGHHDRDRDRDRDRDR 660
           SKEKDPGPDHDW DRRPRDDRD+GRERDKDRDRDR  E SRDYERGH   DRDRDRDRDR
Sbjct: 601 SKEKDPGPDHDWQDRRPRDDRDVGRERDKDRDRDR--ELSRDYERGH---DRDRDRDRDR 660

Query: 661 DRYKEDRDRYSDHHRYRDREPEHDEDWDRGRSSRTHSKSRLPQEEENRSRTRDADYGKRR 720
           DR+KEDRDRYSDHHRYRDREPEH+++W+RGRSSRTHSKSRLPQEEE+RSR+RDADYGKRR
Sbjct: 661 DRHKEDRDRYSDHHRYRDREPEHEDEWERGRSSRTHSKSRLPQEEESRSRSRDADYGKRR 707

Query: 721 RLTSD 725
           RLTSD
Sbjct: 721 RLTSD 707

[Close]

BLAST of Carg12874 vs. TAIR 10
Match: AT5G55670.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 664.1 bits (1712), Expect = 1.4e-190
Identity = 444/769 (57.74%), Postives = 528/769 (68.66%), Query Frame = 0


Query: 1   MDEGEGGLGVGADQIDQFHRNEAISAVADDGFLGEDE-DEYEDLYNDVNVGEGFLQSLRK 60
           MDEG+     G DQ+DQFH+NEAISAVADDGF+ E+E D+YEDLYNDVNVGEGFLQS++K
Sbjct: 1   MDEGD-----GRDQMDQFHQNEAISAVADDGFMAEEEDDDYEDLYNDVNVGEGFLQSMKK 60

Query: 61  NDDLGFKSEEEPK--MEPPAAVPPTSG-----ASIPGFGGGTTDVP------GLGDGGHS 120
           ND+ G ++EE+ K  ME    V P  G      SIPG  G + +        G G G  +
Sbjct: 61  NDEAGSRNEEKEKVNMEEEDRVEPVLGEAEVSISIPGLVGESVEKEAEAESGGGGSGSGT 120

Query: 121 VAERVTDGYNQIPDLRTNEMAIRVGAGSGPPMGGGGGIRVELGQGS-KTNELEERSSNNV 180
                + GY    +++ ++++  +  G G   G GGG+RVELGQ S + N+LE    NN+
Sbjct: 121 DVVVASSGYG-AQEVKVSDVSQEIPGGIG--TGTGGGLRVELGQASNRANDLEAPRGNNI 180

Query: 181 AAHQAPPQQQPHPQQQLQPPAQPQPLAQPQPQHHHQAQQGGVLGNPVSVENEGLLRQGGG 240
           +    PP           PP                     VLGN     NE L+R   G
Sbjct: 181 SQGLLPP-----------PP---------------------VLGN-----NENLMRPVMG 240

Query: 241 VNVN-----GVGGNGFGNVGN-------AGGGGGGGGGGTILFVGDLHWWTTDAELEVEL 300
            NVN     G G N  GN  N        GG GGGGGGG  LFVGDLHWWTTDAELE EL
Sbjct: 241 -NVNGGIPPGPGSNMVGNGANIAMPGVVGGGTGGGGGGGAFLFVGDLHWWTTDAELEAEL 300

Query: 301 CKYGPLKEVKFFDEKASGKSKGYCQVEFYDPSAATACKEGMNGHMFNGRPCVVAYASPFS 360
           CKYG +KEVKFFDEKASGKSKGYCQVEFYDP AA+ACK+ +NG+ FNGRPCVV YASP+S
Sbjct: 301 CKYGAVKEVKFFDEKASGKSKGYCQVEFYDPVAASACKDALNGYPFNGRPCVVEYASPYS 360

Query: 361 VKRMGEAQVNRNQQMAQATNPQARR-GPNDTVGK-------MGGSSIATGGNYQGGDNNR 420
           VKRMGEAQVNR QQ AQ+   QA+R GP D   K          ++ A GGN+QGG+ NR
Sbjct: 361 VKRMGEAQVNRTQQ-AQSVIAQAKRGGPADPPSKPLVANNNNNNNNNAIGGNFQGGE-NR 420

Query: 421 GSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRGIMGNGGNGFGQGMGATPPL-LHPQS 480
           G GRGNWGRGNA GMGGRGP GPMRNR  GMGGRG+MGNG  GFGQGMG  PP+ +  Q 
Sbjct: 421 GFGRGNWGRGNAQGMGGRGPGGPMRNRPNGMGGRGLMGNG--GFGQGMGTGPPMNMMHQP 480

Query: 481 MMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNPAFFGR 540
           MMGQGF+ +FG PM RMG YGGFPGAP P F G+LSSFPPVGGVGLPGVAPHVNPAFFGR
Sbjct: 481 MMGQGFEQAFGGPMARMGGYGGFPGAPGPQFPGLLSSFPPVGGVGLPGVAPHVNPAFFGR 540

Query: 541 GMPMNGMGMMPTSGVD-GPNMGMWSDPSMGGWGS-EEHGGGRAGESSYGEEAGSDQQYGE 600
           GMPMNGMGMMP +GVD G NMGMW DP+ GGWG+ E+ G GRA ESSYGEEA SD QYGE
Sbjct: 541 GMPMNGMGMMPNAGVDGGHNMGMW-DPNSGGWGAGEDLGSGRAAESSYGEEAASDHQYGE 600

Query: 601 GSHERGAWANSAKEKDRGSERDWSQSSDRRYRDD------RERSKEKDPGPDHDWPDRRP 660
            +HERGA  N  KEK+R SER+WS SSDRR R+D      R+  +EKD G  +D P+RR 
Sbjct: 601 VNHERGARPNPVKEKERASEREWSGSSDRRNREDKDAGYERDIPREKDVGHGYDMPERRH 660

Query: 661 RDDRDIGRERDKDRDRDRDKERSRDYERGHHDRDRDRDRDRDRDRYKEDRDRYSDHHRYR 720
           RDDRD GRER+++    +D+ERSR++        RDR+R+R+RDR++E+R+RY   HR R
Sbjct: 661 RDDRDTGREREREH-HHKDRERSREHV-------RDRERERERDRHREERERYGGDHRTR 710

Query: 721 DR-EPEHDEDWDRGRSSRTHSKSRLPQEEENRSRTRDADYGKRRRLTSD 725
            R EPEHDE+W+RGRSSR H+KSRL +E+ +RS++RD DYGKRRRLT++
Sbjct: 721 HRDEPEHDEEWNRGRSSRGHNKSRLSREDNHRSKSRDTDYGKRRRLTTE 710

[Close]

BLAST of Carg12874 vs. TAIR 10
Match: AT5G55670.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 441.8 bits (1135), Expect = 1.1e-123
Identity = 349/766 (45.56%), Postives = 423/766 (55.22%), Query Frame = 0


Query: 1   MDEGEGGLGVGADQIDQFHRNEAISAVADDGFLGEDE-DEYEDLYNDVNVGEGFLQSLRK 60
           MDEG+     G DQ+DQFH+NEAISAVADDGF+ E+E D+YEDLYNDVNVGEGFLQS++K
Sbjct: 1   MDEGD-----GRDQMDQFHQNEAISAVADDGFMAEEEDDDYEDLYNDVNVGEGFLQSMKK 60

Query: 61  NDDLGFKSEEEPK--MEPPAAVPPTSG-----ASIPGFGGGTTDVP------GLGDGGHS 120
           ND+ G ++EE+ K  ME    V P  G      SIPG  G + +        G G G  +
Sbjct: 61  NDEAGSRNEEKEKVNMEEEDRVEPVLGEAEVSISIPGLVGESVEKEAEAESGGGGSGSGT 120

Query: 121 VAERVTDGYNQIPDLRTNEMAIRVGAGSGPPMGGGGGIRVELGQGS-KTNELEERSSNNV 180
                + GY    +++ ++++  +  G G   G GGG+RVELGQ S + N+LE    NN+
Sbjct: 121 DVVVASSGYG-AQEVKVSDVSQEIPGGIG--TGTGGGLRVELGQASNRANDLEAPRGNNI 180

Query: 181 AAHQAPPQQQPHPQQQLQPPAQPQPLAQPQPQHHHQAQQGGVLGNPVSVENEGLLRQGGG 240
           +    PP           PP                     VLGN     NE L+R   G
Sbjct: 181 SQGLLPP-----------PP---------------------VLGN-----NENLMRPVMG 240

Query: 241 VNVN-----GVGGNGFGNVGN-------AGGGGGGGGGGTILFVGDLHWWTTDAELEVEL 300
            NVN     G G N  GN  N        GG GGGGGGG  LFVGDLHWWTTDAELE EL
Sbjct: 241 -NVNGGIPPGPGSNMVGNGANIAMPGVVGGGTGGGGGGGAFLFVGDLHWWTTDAELEAEL 300

Query: 301 CKYGPLKEVKFFDEKASGKSKGYCQVEFYDPSAATACKEGMNGHMFNGRPCVVAYASPFS 360
           CKYG +KEVKFFDEKASGKSKGYCQVEFYDP AA+ACK+ +NG+ FNGRPCVV YASP+S
Sbjct: 301 CKYGAVKEVKFFDEKASGKSKGYCQVEFYDPVAASACKDALNGYPFNGRPCVVEYASPYS 360

Query: 361 VKRMGEAQVNRNQQMAQATNPQARR-GPNDTVGK-------MGGSSIATGGNYQGGDNNR 420
           VKRMGEAQVNR QQ AQ+   QA+R GP D   K          ++ A GGN+QGG+ NR
Sbjct: 361 VKRMGEAQVNRTQQ-AQSVIAQAKRGGPADPPSKPLVANNNNNNNNNAIGGNFQGGE-NR 420

Query: 421 GSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRGIMGNGGNGFGQGMGATPPLLHPQSM 480
           G GRGNWGRGNA GMGGRGP GPMRNR  GM                             
Sbjct: 421 GFGRGNWGRGNAQGMGGRGPGGPMRNRPNGM----------------------------- 480

Query: 481 MGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNPAFFGRG 540
                                                                       
Sbjct: 481 ------------------------------------------------------------ 540

Query: 541 MPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEHGGGRAGESSYGEEAGSDQQYGEGSH 600
                                               GGRA ESSYGEEA SD QYGE +H
Sbjct: 541 ------------------------------------GGRAAESSYGEEAASDHQYGEVNH 585

Query: 601 ERGAWANSAKEKDRGSERDWSQSSDRRYRDD------RERSKEKDPGPDHDWPDRRPRDD 660
           ERGA  N  KEK+R SER+WS SSDRR R+D      R+  +EKD G  +D P+RR RDD
Sbjct: 601 ERGARPNPVKEKERASEREWSGSSDRRNREDKDAGYERDIPREKDVGHGYDMPERRHRDD 585

Query: 661 RDIGRERDKDRDRDRDKERSRDYERGHHDRDRDRDRDRDRDRYKEDRDRYSDHHRYRDR- 720
           RD GRER+++    +D+ERSR++        RDR+R+R+RDR++E+R+RY   HR R R 
Sbjct: 661 RDTGREREREH-HHKDRERSREHV-------RDRERERERDRHREERERYGGDHRTRHRD 585

Query: 721 EPEHDEDWDRGRSSRTHSKSRLPQEEENRSRTRDADYGKRRRLTSD 725
           EPEHDE+W+RGRSSR H+KSRL +E+ +RS++RD DYGKRRRLT++
Sbjct: 721 EPEHDEEWNRGRSSRGHNKSRLSREDNHRSKSRDTDYGKRRRLTTE 585

[Close]

BLAST of Carg12874 vs. TAIR 10
Match: AT1G13190.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 234.2 bits (596), Expect = 3.6e-61
Identity = 257/725 (35.45%), Postives = 345/725 (47.59%), Query Frame = 0


Query: 24  ISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGFKSEEEPKMEPPAAVPPTS 83
           I A+AD+  +G D+DEY+DLY+DVNVGE F           F++  +P  +PPA V  TS
Sbjct: 21  IPALADEELMG-DDDEYDDLYSDVNVGESF-----------FQAHNQP--QPPAQV-NTS 80

Query: 84  GASI----------PGFG---GGTTDVPGLGDGGH---SVAERVTDGYNQIPDLRTNEMA 143
            AS+          P  G   GGT +     DGGH   S  +  +D Y Q        + 
Sbjct: 81  NASLQAQNSHVAAEPRMGIVSGGTVEGKYRNDGGHNGISGPDTRSDVYPQASSFGAKGLN 140

Query: 144 IRVGAGSGPPMGGGGGIRVELGQGSKTNELEERSSNNVAAHQAPPQ-QQPHPQQQLQPPA 203
           I + +      G    +    G       + E   +N  ++ APPQ  Q  P  Q+    
Sbjct: 141 IDIQSNKIAQQGSTTVVLNNHGFSGNAVNVPEMPVHN--SYGAPPQGAQQIPVSQMS--- 200

Query: 204 QPQPLAQPQPQHHHQAQQGGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNVGNAGGGG 263
                  P    +    Q  V+ N                                    
Sbjct: 201 -----VNPNVMMNKSPTQSFVVDN------------------------------------ 260

Query: 264 GGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVEFYDPSA 323
               G T+LFVG+LHWWTTDAE+E  L +YG +KE+KFFDE+ SGKSKGYCQVEFYD +A
Sbjct: 261 ----GNTMLFVGELHWWTTDAEIESVLSQYGRVKEIKFFDERVSGKSKGYCQVEFYDSAA 320

Query: 324 ATACKEGMNGHMFNGRPCVVAYASPFSVKRMGEAQVNRNQQMAQATNPQARRGPNDTVGK 383
           A ACKEGMNG +FNG+ CVVA+ASP ++K+MG     RNQ   Q  N   RR  N+ +G+
Sbjct: 321 AAACKEGMNGFIFNGKACVVAFASPETLKQMGANFTGRNQGQNQIQN---RRPLNEGMGR 380

Query: 384 MGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRGI----M 443
             G++     N Q GD  R  GRG + RG   GMG RG A      GG M GRG+     
Sbjct: 381 --GNNNNNNMNTQNGDGGRNYGRGGFARG-GQGMGNRGGAW-----GGAMRGRGVNNMAS 440

Query: 444 GNGGNGFGQGMG--ATPPLLHPQSMMGQ-GFDPSFGAPMGRMGTYGGFPGAPAPPFSGIL 503
           G+G   +G G+   A   ++HPQ MMG  GFDP+F   MGR   YGG+ G   P   G+ 
Sbjct: 441 GSGAGPYGPGLAGPAFGGMMHPQGMMGAGGFDPTF---MGRGAGYGGYSGIAYP---GMP 500

Query: 504 SSFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPN-MGMWSDPSMGGWGSE 563
            S+P V  +G+ G+APHVNPAFFG      GMG M +SG++G +   MWS+ +       
Sbjct: 501 HSYPGVNAMGMVGIAPHVNPAFFG-----TGMGTMGSSGMNGVHAAAMWSEAN------- 560

Query: 564 EHGGGRAGESSYGEEAGSDQQYGEGSHERGAWANSAKEKDRG-SERDWSQSS-DRRYRDD 623
             GGG  G S YG      Q+  E           +++K+R  +ERDWS++S DRR++  
Sbjct: 561 -GGGGEEGGSEYGGYEDETQEKEE---------KPSRDKERATTERDWSENSGDRRHKSH 571

Query: 624 RERSKEKDPGPDHDWPDRRPRDDRDIGRERDKDRDRDRDKERSRDYERGHHDRDRDRDRD 683
           RE                          E+D  R+                         
Sbjct: 621 RE--------------------------EKDSHRE------------------------- 571

Query: 684 RDRDRYKEDRDRYSDHHRYRDREPEHDEDWDRGRSS-RTHSKSRLPQEEENRSRTRDADY 721
                YK+ RDR SD             ++DRG+SS ++ S+SR+  E+++RSR+RDADY
Sbjct: 681 -----YKQQRDRDSD-------------EFDRGQSSLKSRSRSRM-SEDDHRSRSRDADY 571

[Close]

BLAST of Carg12874 vs. TAIR 10
Match: AT1G60900.1 (U2 snRNP auxilliary factor, large subunit, splicing factor )

HSP 1 Score: 46.2 bits (108), Expect = 1.4e-04
Identity = 63/174 (36.21%), Postives = 84/174 (48.28%), Query Frame = 0


Query: 564 SHERGAWANSAKEKDRGSERDWSQSSDRRYRDDRERSKEKDPGPDHDWPDRRPRDDRDIG 623
           SH+    ++   EKD  + RD   + DR    DR+R K +D                   
Sbjct: 39  SHDLKKDSSKISEKDNENGRDKDGNKDRDREKDRDREKSRD------------------- 98

Query: 624 RERDKDRDRDRDKERSRDYERGHHDRDRDRDRDRDRDRYKEDRDRYSDHH-RYRDREPEH 683
           R+R+K RDRDRD+ERS+D +R  H RDR RDR R+R   ++D D   DHH R RDR+   
Sbjct: 99  RDREKSRDRDRDRERSKDRQRDRHHRDRHRDRSRERSEKRDDLD--DDHHRRSRDRDRRR 158

Query: 684 DEDWDRGRSSRTHSKSRLPQEEENRSRT---RDADYGKRRRLTSDLNDIRYRGF 734
             D DR    R  S+SR     E RSR+     +++  R R  S     R  GF
Sbjct: 159 SRDRDREVRHRRRSRSRSRSRSERRSRSEHRHKSEHRSRSRSRSRSKSKRRSGF 191

The following BLAST results are available for this feature:

BLAST of Carg12874 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7024972.1	0.0e+00	100.00	Nipped-B-like protein B, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6592096.1	0.0e+00	99.72	Nipped-B-like protein B, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022936014.1	0.0e+00	98.76	cleavage and polyadenylation specificity factor subunit CG7185-like [Cucurbita m...	[more]
XP_023535463.1	0.0e+00	98.48	cleavage and polyadenylation specificity factor subunit 6-like [Cucurbita pepo s...	[more]
XP_022975849.1	0.0e+00	98.20	cleavage and polyadenylation specificity factor subunit 6-like [Cucurbita maxima...	[more]

BLAST of Carg12874 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg12874 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F726	0.0e+00	98.76	cleavage and polyadenylation specificity factor subunit CG7185-like OS=Cucurbita...	[more]
A0A6J1ILS2	0.0e+00	98.20	cleavage and polyadenylation specificity factor subunit 6-like OS=Cucurbita maxi...	[more]
A0A5D3CC60	0.0e+00	89.36	Cleavage and polyadenylation specificity factor subunit 6 OS=Cucumis melo var. m...	[more]
A0A0A0K3G6	0.0e+00	88.10	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G104800 PE=4 SV...	[more]
A0A6J1CCR1	0.0e+00	89.10	cleavage and polyadenylation specificity factor subunit 6 OS=Momordica charantia...	[more]

BLAST of Carg12874 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G55670.1	1.4e-190	57.74	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G55670.2	1.1e-123	45.56	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G13190.1	3.6e-61	35.45	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G60900.1	1.4e-04	36.21	U2 snRNP auxilliary factor, large subunit, splicing factor	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 254..327 e-value: 5.9E-20 score: 82.3
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 255..324 e-value: 2.7E-13 score: 49.5
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 253..331 score: 13.532493
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 160..351 e-value: 3.7E-23 score: 84.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 367..390
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 520..718
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 569..718
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 155..176
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 177..192
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 154..212
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 129..148
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 347..408
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 193..210
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..107
None	No IPR available	PANTHER	PTHR23204:SF9	CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 6-LIKE	coord: 1..724
None	No IPR available	CDD	cd12372	RRM_CFIm68_CFIm59	coord: 255..328 e-value: 3.44205E-33 score: 120.478
IPR034772	CPSF6/7 family	PANTHER	PTHR23204	CLEAVAGE AND POLYADENYLATION SPECIFIC FACTOR	coord: 1..724
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 252..346

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12874-RA	Carg12874-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding