Carg12843 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg12843
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	syntaxin-51-like
Location	Carg_Chr09: 5458639 .. 5462156 (+)
RNA-Seq Expression	Carg12843
Synteny	Carg12843

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATAGGTTTGTGCTATTACAAATGGTATCAGAGTCAAAGATACTAAAAAAAAATGGGTATCATAATTGTTGTTAGAACGATTATACGATTACAGGTACATATGAGACCCACAGCAGTGTCCAATAATCTCGAGGAACGCTTTTCTTTCTTTATATTTTTTCATTTTCTTCTTGATTTTCTCCCTTCAGGAATTTTCAAACCAATTTGCGCAGATCCAAATTCCGACGTTCTGATTCCTGATTCCAATTGATCGACGAATGTTGGTCGCCGGCGGTGGCGGATTTGTACCATCCTTCATAGCTATTCTATAAATTCCCCAGCCGATCTGCCATTGCCGCCGGTTGAATTCTCATTTTTCGATCGTCAATTCTGATTTCCAAACGGTAAGTTCCGTTTCCTTTTGATTATGATCTCTGTATCGTCTGGTAGTTTGCTTAATTTATTTTTTAGGGCACATTCGATGTATTTGTTTGTTCGTTCTATCGTATCTGTTGATTTCAGTGTTTGATTCTATGGTTTGTACCTCGATTCTCCGTTTTCTGTTTGTCCTTGGTTTGTGTATGGATGGAATCGTTTGATCTTTCAGTTGACCAAATCGTGTGTGATTCTTCTAGATTATTCTAAGGGTTCAGCTGTACCTGGATTAGCTTAATCTAGCTTTTGCCTTCTGCTCGATTCTCTTTCTGTGGATGAACTTAGCTGGTTATTTGATGAAGGACAAATATCATCGTTAGCTTAATAAGGTCGAGCCAAATAATTGTATGAGCTCACTAGCCTAATAGAGTTAAGCCAAATAATTATATGAGCTCCATCGCCTAATAGGGTCAAGCCAAATCATTGTATGAGCTCACTCGCCTATAGGGTCGAGCCAAATAACTGTATGAGCTCACTCGCCTAATAGGGTCGAGCCAAATAACTGTATGAGCTCACTCGCCTGATAGGGTCAAGCCAAATAACTGTATGAGCTCACTCGCTTAATAGGGTCAAATCAAATCATTGTATGAGTTCACTCACCTAATAAGGTCAAGCCAAATAATTGTATGAGCTCATTCGCCTAATAGGGTCGAGCCAAATAATTGTATGAGCTCACTCGCCTGATAGGGTCAAGCCAAATAATTGTATGAGCTCACTCACCTAATAGGGTCAAGCCAAATAATTGTATGAGCTCACTAGCCTAACAGGGTCAAGCCAAATAATTGTATGAGCCCACTAGTCTAATAGGGTTAAGCCAAACAATTGTACGAGCTCATTGTATATTTATTTTTAGAAAAAAATGATTTAATACCTAAATATTTCAAGAATAGATTAACTGGTCTCTACGGTACATACTCCACCACAACTAGGGTTTCATCCTAAGAAATCAAAAGCACAGAATGGCGCGTAGTTTCTATATAGTGTCTTGTAATCTTTTCTCGATTGATGTTAATAAAGAGTGCGAGTGTTTCCCACGTAGAGCAACTAGTTTTCTTGATTTTTGTGGCGTTTGGATTGAAGGCCAATGGCGTATACTTTGGAATCATGGGCGAAGGAATACAATGAAGCCATGAAACTCTCTGAAGATATCAATGGCATGATTTCTGGGAGAAGTTCTGCTTCTGGACCAGAAGCTCAGCGTCATGCCTCAGCTATACGCAGGAAGATCACAATATTGGGTACCAGACTTGATACCTTGCAGACTCAGTTACCCAAGCTTCAAGGAAAGCAACCAATGTAAGCCATGTGATATATGGTTTTTTCTGGGAATTGTGCGTTCTTGATGGTATATTATTTCTGTGTCTCGTGGCTTGCAGACCGGAGAAAGAGATGAATCGACGCAGGGATATGATAGCGAATTTGAGATCGAAAGCTAACCAGATGGCTTCAACTTTGAACATGTCTAACTTTGCTAACCGAGATAGCTTACTTGGTCCAGAAATAAAGCCAGCAGAGAATAGGACGGAAGGCTTAGACAACCGAGGCCTACTCGGTTTTCAACGACAAGTTATGAGAGGCAGGTTTATTTGTTTAAAGTCACTGGAAAAATATCAGTATGAATTTCTGTTAATGTGAAAATGTGATATTTGGAGCAGAGCAAGATGAAGGCCTCGAGAAACTGGAAGGGACTATAATGAGCACAAAACATATTGCATTGGCTGTCAATGAAGAACTTAGCCTTCACACGAGACTTATCGTATGTCTTTCGATCGTTGTCGTGTTTATTCATTTGTTGACTTACTTGATCACTAAGTCTTCTCACGAACTCGATTCTTATAATTTTAGTCTTGTTTTTAACTCTGTTCAATGGTGCAGGATGATTTGGATGAACATGTCGATGTTACAGATTCCCGATTACGGGTACGAATCTCTTGTTCTGATTCTTTTCTTACATGATAGGATGTTTGTTGTGTACATATCTGTTGTGTACTATAACTGTGAGAGGGTTCACCATGTTGGAAAAGATAGAAACTATTTGGTGTCCAACATGGGCAGACTGAAGAAGAAGGGTGCAATCGACAATCTTTGCCTTCCTAAGTTATCAAATTTGAAAGATTACATACTTAGGAGGTAAATTTTGCCTCTCCCTGTGATACCTTTTTGGCTCTGGCCCTGGTCTCAAAAGTCCGGGCTGGTTCTCCTAACTGTTCAAACTACCTCGACGGTCTAGATTATTATTGTGAGATCCCTCATCGGTTTGGGAGGAGAACGAAACATTTTTTATAAGGGTGTAGAAACCTCTCTCAGTAGACGCCTTTTAAAAACCTTGAGGGAAAGTCCGAAAGGAAAACCCAAAGAGAACAATATTTGCTGGCGGTGGGCTTGGGCCGTTACAAATGGTATCAGAGCCAAACATCAGGCAATGTGCCAACGAGGAGGCTAAGCCCCAAAGGGAGGTGGACACGAGGCGATGTGCCAGCAAGGACGCTGGGTTGGAAGGGGGTGGATTGGGGGTCCCACATCGTTTGGAGAAGGGACCGAGTATCAGCGAGGACGCTGGGCCCCGAAGGGGGGTGGATTGGGAGATCTCACATCGGTTGGAGAGGAGAACGAAACATTCTTTATAAAGGTGTGGAAATCTCTTCCTAGCAAAACGCTTTTTAAAAACCTTGAGGGAAAGCCCGAAAAGGACAATATCTAGTAGCGGTGGGTTTCAACTTGGACGATTACGATTATTATCTTTATTACTGTTTTTTACCAAGAAGATAGTTCAAATTTCATTGACAGCATCGTTAATCATTGTATCAAAACAGAGAGTGCAGAAGAGGCTGGCAATAATGAACAAGCGGACCAAGGGTGGATGCACTTGCATGTCAATGATTTCATCAATTGTTGGAATTGTCGTTCTCATCACTCTCATATGGCTACTCATCAAGTATTTGTAAATTCACTGTCTTGGTATGAATTTACTAGAACATAAACTTTTGGTGTAAGATTCTGATATCTGTTGATTTTCTTAGTGAATTTGTGTGTTTTTTTCTTCATCTTTCACTTGGATTCCATGAGATTTAGGAGATTTTGGGCTTACCAACTCTTCACCCT

mRNA sequence

ATGATAGGTTTGTGCTATTACAAATGGTATCAGAGTCAAAGATACTAAAAAAAAATGGGTATCATAATTGTTGTTAGAACGATTATACGATTACAGGTACATATGAGACCCACAGCAGTGTCCAATAATCTCGAGGAACGCTTTTCTTTCTTTATATTTTTTCATTTTCTTCTTGATTTTCTCCCTTCAGGAATTTTCAAACCAATTTGCGCAGATCCAAATTCCGACGTTCTGATTCCTGATTCCAATTGATCGACGAATGTTGGTCGCCGGCGGTGGCGGATTTGTACCATCCTTCATAGCTATTCTATAAATTCCCCAGCCGATCTGCCATTGCCGCCGGTTGAATTCTCATTTTTCGATCGTCAATTCTGATTTCCAAACGGCCAATGGCGTATACTTTGGAATCATGGGCGAAGGAATACAATGAAGCCATGAAACTCTCTGAAGATATCAATGGCATGATTTCTGGGAGAAGTTCTGCTTCTGGACCAGAAGCTCAGCGTCATGCCTCAGCTATACGCAGGAAGATCACAATATTGGGTACCAGACTTGATACCTTGCAGACTCAGTTACCCAAGCTTCAAGGAAAGCAACCAATACCGGAGAAAGAGATGAATCGACGCAGGGATATGATAGCGAATTTGAGATCGAAAGCTAACCAGATGGCTTCAACTTTGAACATGTCTAACTTTGCTAACCGAGATAGCTTACTTGGTCCAGAAATAAAGCCAGCAGAGAATAGGACGGAAGGCTTAGACAACCGAGGCCTACTCGGTTTTCAACGACAAGTTATGAGAGGCAGGTTTATTTAGCAAGATGAAGGCCTCGAGAAACTGGAAGGGACTATAATGAGCACAAAACATATTGCATTGGCTGTCAATGAAGAACTTAGCCTTCACACGAGACTTATCGATGATTTGGATGAACATGTCGATGTTACAGATTCCCGATTACGGAGAGTGCAGAAGAGGCTGGCAATAATGAACAAGCGGACCAAGGGTGGATGCACTTGCATGTCAATGATTTCATCAATTGTTGGAATTGTCGTTCTCATCACTCTCATATGGCTACTCATCAAGTATTTGTAAATTCACTGTCTTGGTATGAATTTACTAGAACATAAACTTTTGGTGTAAGATTCTGATATCTGTTGATTTTCTTAGTGAATTTGTGTGTTTTTTTCTTCATCTTTCACTTGGATTCCATGAGATTTAGGAGATTTTGGGCTTACCAACTCTTCACCCT

Coding sequence (CDS)

ATGGCGTATACTTTGGAATCATGGGCGAAGGAATACAATGAAGCCATGAAACTCTCTGAAGATATCAATGGCATGATTTCTGGGAGAAGTTCTGCTTCTGGACCAGAAGCTCAGCGTCATGCCTCAGCTATACGCAGGAAGATCACAATATTGGGTACCAGACTTGATACCTTGCAGACTCAGTTACCCAAGCTTCAAGGAAAGCAACCAATACCGGAGAAAGAGATGAATCGACGCAGGGATATGATAGCGAATTTGAGATCGAAAGCTAACCAGATGGCTTCAACTTTGAACATGTCTAACTTTGCTAACCGAGATAGCTTACTTGGTCCAGAAATAAAGCCAGCAGAGAATAGGACGGAAGGCTTAGACAACCGAGGCCTACTCGGTTTTCAACGACAAGTTATGAGAGGCAGGTTTATTTAG

Protein sequence

MAYTLESWAKEYNEAMKLSEDINGMISGRSSASGPEAQRHASAIRRKITILGTRLDTLQTQLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLNMSNFANRDSLLGPEIKPAENRTEGLDNRGLLGFQRQVMRGRFI

Homology

[Close]

BLAST of Carg12843 vs. NCBI nr
Match: KAG7024942.1 (Syntaxin-51 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 273.9 bits (699), Expect = 7.9e-70
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MAYTLESWAKEYNEAMKLSEDINGMISGRSSASGPEAQRHASAIRRKITILGTRLDTLQT 60
           MAYTLESWAKEYNEAMKLSEDINGMISGRSSASGPEAQRHASAIRRKITILGTRLDTLQT
Sbjct: 1   MAYTLESWAKEYNEAMKLSEDINGMISGRSSASGPEAQRHASAIRRKITILGTRLDTLQT 60

Query: 61  QLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLNMSNFANRDSLLGPEIKPAENRT 120
           QLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLNMSNFANRDSLLGPEIKPAENRT
Sbjct: 61  QLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLNMSNFANRDSLLGPEIKPAENRT 120

Query: 121 EGLDNRGLLGFQRQVMRGRFI 142
           EGLDNRGLLGFQRQVMRGRFI
Sbjct: 121 EGLDNRGLLGFQRQVMRGRFI 141

[Close]

BLAST of Carg12843 vs. NCBI nr
Match: XP_023535353.1 (syntaxin-51-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 265.8 bits (678), Expect = 2.2e-67
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MAYTLESWAKEYNEAMKLSEDINGMISGRSSASGPEAQRHASAIRRKITILGTRLDTLQT 60
           MAYTLESWAKEYNEAMKLSEDINGMISGRSSASGPEAQRHASAIRRKITILGTRLDTLQT
Sbjct: 1   MAYTLESWAKEYNEAMKLSEDINGMISGRSSASGPEAQRHASAIRRKITILGTRLDTLQT 60

Query: 61  QLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLNMSNFANRDSLLGPEIKPAENRT 120
           QLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLNMSNFANRDSLLGPEIKPAENRT
Sbjct: 61  QLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLNMSNFANRDSLLGPEIKPAENRT 120

Query: 121 EGLDNRGLLGFQRQVMR 138
           EGLDNRGLLGFQRQVMR
Sbjct: 121 EGLDNRGLLGFQRQVMR 137

[Close]

BLAST of Carg12843 vs. NCBI nr
Match: XP_022936274.1 (syntaxin-51-like [Cucurbita moschata])

HSP 1 Score: 265.8 bits (678), Expect = 2.2e-67
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MAYTLESWAKEYNEAMKLSEDINGMISGRSSASGPEAQRHASAIRRKITILGTRLDTLQT 60
           MAYTLESWAKEYNEAMKLSEDINGMISGRSSASGPEAQRHASAIRRKITILGTRLDTLQT
Sbjct: 1   MAYTLESWAKEYNEAMKLSEDINGMISGRSSASGPEAQRHASAIRRKITILGTRLDTLQT 60

Query: 61  QLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLNMSNFANRDSLLGPEIKPAENRT 120
           QLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLNMSNFANRDSLLGPEIKPAENRT
Sbjct: 61  QLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLNMSNFANRDSLLGPEIKPAENRT 120

Query: 121 EGLDNRGLLGFQRQVMR 138
           EGLDNRGLLGFQRQVMR
Sbjct: 121 EGLDNRGLLGFQRQVMR 137

[Close]

BLAST of Carg12843 vs. NCBI nr
Match: XP_022976367.1 (syntaxin-51-like [Cucurbita maxima])

HSP 1 Score: 264.2 bits (674), Expect = 6.3e-67
Identity = 136/137 (99.27%), Postives = 136/137 (99.27%), Query Frame = 0


Query: 1   MAYTLESWAKEYNEAMKLSEDINGMISGRSSASGPEAQRHASAIRRKITILGTRLDTLQT 60
           MAYTLESW KEYNEAMKLSEDINGMISGRSSASGPEAQRHASAIRRKITILGTRLDTLQT
Sbjct: 1   MAYTLESWVKEYNEAMKLSEDINGMISGRSSASGPEAQRHASAIRRKITILGTRLDTLQT 60

Query: 61  QLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLNMSNFANRDSLLGPEIKPAENRT 120
           QLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLNMSNFANRDSLLGPEIKPAENRT
Sbjct: 61  QLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLNMSNFANRDSLLGPEIKPAENRT 120

Query: 121 EGLDNRGLLGFQRQVMR 138
           EGLDNRGLLGFQRQVMR
Sbjct: 121 EGLDNRGLLGFQRQVMR 137

[Close]

BLAST of Carg12843 vs. NCBI nr
Match: KAA0048124.1 (syntaxin-51-like [Cucumis melo var. makuwa])

HSP 1 Score: 248.1 bits (632), Expect = 4.7e-62
Identity = 131/145 (90.34%), Postives = 136/145 (93.79%), Query Frame = 0


Query: 1   MAYTLESWAKEYNEAMKLSEDINGMISGRSS--ASGPEAQRHASAIRRKITILGTRLDTL 60
           MAYTLESW KEYNEA+KLSEDINGMIS RSS  ASGPEAQRHASAIRRKITILGTRLDTL
Sbjct: 1   MAYTLESWTKEYNEALKLSEDINGMISERSSLAASGPEAQRHASAIRRKITILGTRLDTL 60

Query: 61  QTQLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLNMSNFANRDSLLGPEIKPAE- 120
           Q+QLPKLQGKQPIPEKEMNRRRDMI NLRSKA QMAS LNMSNFANRDSLLGPEIKPA+ 
Sbjct: 61  QSQLPKLQGKQPIPEKEMNRRRDMIGNLRSKAKQMASALNMSNFANRDSLLGPEIKPADV 120

Query: 121 -NRTEGLDNRGLLGFQRQVMRGRFI 142
            NRTEGLDNRGL+GFQRQ+MRGRFI
Sbjct: 121 MNRTEGLDNRGLVGFQRQIMRGRFI 145

[Close]

BLAST of Carg12843 vs. ExPASy Swiss-Prot
Match: Q9SA23 (Syntaxin-51 OS=Arabidopsis thaliana OX=3702 GN=SYP51 PE=1 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 2.0e-44
Identity = 95/141 (67.38%), Postives = 119/141 (84.40%), Query Frame = 0


Query: 1   MAYTLESWAKEYNEAMKLSEDINGMISGRSSA--SGPEAQRHASAIRRKITILGTRLDTL 60
           MA + +SW + YNEA+KLSE+INGMIS RSS+  +GP+AQR ASAIRRKITI G +LD+L
Sbjct: 1   MASSSDSWMRAYNEALKLSEEINGMISERSSSAVTGPDAQRRASAIRRKITIFGNKLDSL 60

Query: 61  QTQLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLNMSNFANRDSLLGPEIKPAE- 120
           Q+ L ++ GK PI EKEMNRR+DM+ NLRSKANQMA+ LNMSNFANRDSLLGP+IKP + 
Sbjct: 61  QSLLAEIHGK-PISEKEMNRRKDMVGNLRSKANQMANALNMSNFANRDSLLGPDIKPDDS 120

Query: 121 -NRTEGLDNRGLLGFQRQVMR 138
            +R  G+DN+G++G+QRQVMR
Sbjct: 121 MSRVTGMDNQGIVGYQRQVMR 140

[Close]

BLAST of Carg12843 vs. ExPASy Swiss-Prot
Match: Q94KK7 (Syntaxin-52 OS=Arabidopsis thaliana OX=3702 GN=SYP52 PE=1 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 3.5e-44
Identity = 95/141 (67.38%), Postives = 115/141 (81.56%), Query Frame = 0


Query: 1   MAYTLESWAKEYNEAMKLSEDINGMISGR--SSASGPEAQRHASAIRRKITILGTRLDTL 60
           MA + + W +EYNEA+KLSEDINGM+S R  S  +GP+AQR ASAIRRKITILGTRLD+L
Sbjct: 1   MASSSDPWMREYNEALKLSEDINGMMSERNASGLTGPDAQRRASAIRRKITILGTRLDSL 60

Query: 61  QTQLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLNMSNFANRDSLLGPEIKP--A 120
           Q+ L K+ GKQ + EKEMNRR+DM+ NLRSK NQ+AS LNMSNFANRDSL G ++KP  A
Sbjct: 61  QSLLVKVPGKQHVSEKEMNRRKDMVGNLRSKTNQVASALNMSNFANRDSLFGTDLKPDDA 120

Query: 121 ENRTEGLDNRGLLGFQRQVMR 138
            NR  G+DN+G++ FQRQVMR
Sbjct: 121 INRVSGMDNQGIVVFQRQVMR 141

[Close]

BLAST of Carg12843 vs. ExPASy TrEMBL
Match: A0A6J1F7U9 (syntaxin-51-like OS=Cucurbita moschata OX=3662 GN=LOC111442942 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 1.0e-67
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MAYTLESWAKEYNEAMKLSEDINGMISGRSSASGPEAQRHASAIRRKITILGTRLDTLQT 60
           MAYTLESWAKEYNEAMKLSEDINGMISGRSSASGPEAQRHASAIRRKITILGTRLDTLQT
Sbjct: 1   MAYTLESWAKEYNEAMKLSEDINGMISGRSSASGPEAQRHASAIRRKITILGTRLDTLQT 60

Query: 61  QLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLNMSNFANRDSLLGPEIKPAENRT 120
           QLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLNMSNFANRDSLLGPEIKPAENRT
Sbjct: 61  QLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLNMSNFANRDSLLGPEIKPAENRT 120

Query: 121 EGLDNRGLLGFQRQVMR 138
           EGLDNRGLLGFQRQVMR
Sbjct: 121 EGLDNRGLLGFQRQVMR 137

[Close]

BLAST of Carg12843 vs. ExPASy TrEMBL
Match: A0A6J1IFJ4 (syntaxin-51-like OS=Cucurbita maxima OX=3661 GN=LOC111476792 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 3.0e-67
Identity = 136/137 (99.27%), Postives = 136/137 (99.27%), Query Frame = 0


Query: 1   MAYTLESWAKEYNEAMKLSEDINGMISGRSSASGPEAQRHASAIRRKITILGTRLDTLQT 60
           MAYTLESW KEYNEAMKLSEDINGMISGRSSASGPEAQRHASAIRRKITILGTRLDTLQT
Sbjct: 1   MAYTLESWVKEYNEAMKLSEDINGMISGRSSASGPEAQRHASAIRRKITILGTRLDTLQT 60

Query: 61  QLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLNMSNFANRDSLLGPEIKPAENRT 120
           QLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLNMSNFANRDSLLGPEIKPAENRT
Sbjct: 61  QLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLNMSNFANRDSLLGPEIKPAENRT 120

Query: 121 EGLDNRGLLGFQRQVMR 138
           EGLDNRGLLGFQRQVMR
Sbjct: 121 EGLDNRGLLGFQRQVMR 137

[Close]

BLAST of Carg12843 vs. ExPASy TrEMBL
Match: A0A5A7TYL4 (Syntaxin-51-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold63G00070 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 2.3e-62
Identity = 131/145 (90.34%), Postives = 136/145 (93.79%), Query Frame = 0


Query: 1   MAYTLESWAKEYNEAMKLSEDINGMISGRSS--ASGPEAQRHASAIRRKITILGTRLDTL 60
           MAYTLESW KEYNEA+KLSEDINGMIS RSS  ASGPEAQRHASAIRRKITILGTRLDTL
Sbjct: 1   MAYTLESWTKEYNEALKLSEDINGMISERSSLAASGPEAQRHASAIRRKITILGTRLDTL 60

Query: 61  QTQLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLNMSNFANRDSLLGPEIKPAE- 120
           Q+QLPKLQGKQPIPEKEMNRRRDMI NLRSKA QMAS LNMSNFANRDSLLGPEIKPA+ 
Sbjct: 61  QSQLPKLQGKQPIPEKEMNRRRDMIGNLRSKAKQMASALNMSNFANRDSLLGPEIKPADV 120

Query: 121 -NRTEGLDNRGLLGFQRQVMRGRFI 142
            NRTEGLDNRGL+GFQRQ+MRGRFI
Sbjct: 121 MNRTEGLDNRGLVGFQRQIMRGRFI 145

[Close]

BLAST of Carg12843 vs. ExPASy TrEMBL
Match: A0A0A0K2Y5 (t-SNARE coiled-coil homology domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G084710 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 1.6e-60
Identity = 128/141 (90.78%), Postives = 133/141 (94.33%), Query Frame = 0


Query: 1   MAYTLESWAKEYNEAMKLSEDINGMISGRSS--ASGPEAQRHASAIRRKITILGTRLDTL 60
           MAYTLESW KEYNEA+KLSEDINGMIS RSS  ASGPEAQRHASAIRRKITILGTRLDTL
Sbjct: 1   MAYTLESWTKEYNEALKLSEDINGMISERSSLAASGPEAQRHASAIRRKITILGTRLDTL 60

Query: 61  QTQLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLNMSNFANRDSLLGPEIKPAE- 120
           Q+QLPKLQGKQPIPEKEMNRRRDMI NLRSKA QMASTLNMSNFANRDSLLGPEIKPA+ 
Sbjct: 61  QSQLPKLQGKQPIPEKEMNRRRDMIGNLRSKAKQMASTLNMSNFANRDSLLGPEIKPADV 120

Query: 121 -NRTEGLDNRGLLGFQRQVMR 138
            NRTEGLDNRGL+GFQRQ+MR
Sbjct: 121 VNRTEGLDNRGLVGFQRQIMR 141

[Close]

BLAST of Carg12843 vs. ExPASy TrEMBL
Match: A0A5D3DIH2 (Syntaxin-51-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G00130 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 6.2e-60
Identity = 127/141 (90.07%), Postives = 132/141 (93.62%), Query Frame = 0


Query: 1   MAYTLESWAKEYNEAMKLSEDINGMISGRSS--ASGPEAQRHASAIRRKITILGTRLDTL 60
           MAYTLESW KEYNEA+KLSEDINGMIS RSS  ASGPEAQRHASAIRRKITILGTRLDTL
Sbjct: 1   MAYTLESWTKEYNEALKLSEDINGMISERSSLAASGPEAQRHASAIRRKITILGTRLDTL 60

Query: 61  QTQLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLNMSNFANRDSLLGPEIKPAE- 120
           Q+QLPKLQGKQPIPEKEMNRRRDMI NLRSKA QMAS LNMSNFANRDSLLGPEIKPA+ 
Sbjct: 61  QSQLPKLQGKQPIPEKEMNRRRDMIGNLRSKAKQMASALNMSNFANRDSLLGPEIKPADV 120

Query: 121 -NRTEGLDNRGLLGFQRQVMR 138
            NRTEGLDNRGL+GFQRQ+MR
Sbjct: 121 MNRTEGLDNRGLVGFQRQIMR 141

[Close]

BLAST of Carg12843 vs. TAIR 10
Match: AT1G16240.1 (syntaxin of plants 51 )

HSP 1 Score: 179.9 bits (455), Expect = 1.5e-45
Identity = 95/141 (67.38%), Postives = 119/141 (84.40%), Query Frame = 0


Query: 1   MAYTLESWAKEYNEAMKLSEDINGMISGRSSA--SGPEAQRHASAIRRKITILGTRLDTL 60
           MA + +SW + YNEA+KLSE+INGMIS RSS+  +GP+AQR ASAIRRKITI G +LD+L
Sbjct: 1   MASSSDSWMRAYNEALKLSEEINGMISERSSSAVTGPDAQRRASAIRRKITIFGNKLDSL 60

Query: 61  QTQLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLNMSNFANRDSLLGPEIKPAE- 120
           Q+ L ++ GK PI EKEMNRR+DM+ NLRSKANQMA+ LNMSNFANRDSLLGP+IKP + 
Sbjct: 61  QSLLAEIHGK-PISEKEMNRRKDMVGNLRSKANQMANALNMSNFANRDSLLGPDIKPDDS 120

Query: 121 -NRTEGLDNRGLLGFQRQVMR 138
            +R  G+DN+G++G+QRQVMR
Sbjct: 121 MSRVTGMDNQGIVGYQRQVMR 140

[Close]

BLAST of Carg12843 vs. TAIR 10
Match: AT1G16240.2 (syntaxin of plants 51 )

HSP 1 Score: 179.9 bits (455), Expect = 1.5e-45
Identity = 95/141 (67.38%), Postives = 119/141 (84.40%), Query Frame = 0


Query: 1   MAYTLESWAKEYNEAMKLSEDINGMISGRSSA--SGPEAQRHASAIRRKITILGTRLDTL 60
           MA + +SW + YNEA+KLSE+INGMIS RSS+  +GP+AQR ASAIRRKITI G +LD+L
Sbjct: 1   MASSSDSWMRAYNEALKLSEEINGMISERSSSAVTGPDAQRRASAIRRKITIFGNKLDSL 60

Query: 61  QTQLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLNMSNFANRDSLLGPEIKPAE- 120
           Q+ L ++ GK PI EKEMNRR+DM+ NLRSKANQMA+ LNMSNFANRDSLLGP+IKP + 
Sbjct: 61  QSLLAEIHGK-PISEKEMNRRKDMVGNLRSKANQMANALNMSNFANRDSLLGPDIKPDDS 120

Query: 121 -NRTEGLDNRGLLGFQRQVMR 138
            +R  G+DN+G++G+QRQVMR
Sbjct: 121 MSRVTGMDNQGIVGYQRQVMR 140

[Close]

BLAST of Carg12843 vs. TAIR 10
Match: AT1G16240.3 (syntaxin of plants 51 )

HSP 1 Score: 179.9 bits (455), Expect = 1.5e-45
Identity = 95/141 (67.38%), Postives = 119/141 (84.40%), Query Frame = 0


Query: 1   MAYTLESWAKEYNEAMKLSEDINGMISGRSSA--SGPEAQRHASAIRRKITILGTRLDTL 60
           MA + +SW + YNEA+KLSE+INGMIS RSS+  +GP+AQR ASAIRRKITI G +LD+L
Sbjct: 1   MASSSDSWMRAYNEALKLSEEINGMISERSSSAVTGPDAQRRASAIRRKITIFGNKLDSL 60

Query: 61  QTQLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLNMSNFANRDSLLGPEIKPAE- 120
           Q+ L ++ GK PI EKEMNRR+DM+ NLRSKANQMA+ LNMSNFANRDSLLGP+IKP + 
Sbjct: 61  QSLLAEIHGK-PISEKEMNRRKDMVGNLRSKANQMANALNMSNFANRDSLLGPDIKPDDS 120

Query: 121 -NRTEGLDNRGLLGFQRQVMR 138
            +R  G+DN+G++G+QRQVMR
Sbjct: 121 MSRVTGMDNQGIVGYQRQVMR 140

[Close]

BLAST of Carg12843 vs. TAIR 10
Match: AT1G79590.1 (syntaxin of plants 52 )

HSP 1 Score: 179.1 bits (453), Expect = 2.5e-45
Identity = 95/141 (67.38%), Postives = 115/141 (81.56%), Query Frame = 0


Query: 1   MAYTLESWAKEYNEAMKLSEDINGMISGR--SSASGPEAQRHASAIRRKITILGTRLDTL 60
           MA + + W +EYNEA+KLSEDINGM+S R  S  +GP+AQR ASAIRRKITILGTRLD+L
Sbjct: 1   MASSSDPWMREYNEALKLSEDINGMMSERNASGLTGPDAQRRASAIRRKITILGTRLDSL 60

Query: 61  QTQLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLNMSNFANRDSLLGPEIKP--A 120
           Q+ L K+ GKQ + EKEMNRR+DM+ NLRSK NQ+AS LNMSNFANRDSL G ++KP  A
Sbjct: 61  QSLLVKVPGKQHVSEKEMNRRKDMVGNLRSKTNQVASALNMSNFANRDSLFGTDLKPDDA 120

Query: 121 ENRTEGLDNRGLLGFQRQVMR 138
            NR  G+DN+G++ FQRQVMR
Sbjct: 121 INRVSGMDNQGIVVFQRQVMR 141

[Close]

BLAST of Carg12843 vs. TAIR 10
Match: AT1G79590.2 (syntaxin of plants 52 )

HSP 1 Score: 179.1 bits (453), Expect = 2.5e-45
Identity = 95/141 (67.38%), Postives = 115/141 (81.56%), Query Frame = 0


Query: 1   MAYTLESWAKEYNEAMKLSEDINGMISGR--SSASGPEAQRHASAIRRKITILGTRLDTL 60
           MA + + W +EYNEA+KLSEDINGM+S R  S  +GP+AQR ASAIRRKITILGTRLD+L
Sbjct: 1   MASSSDPWMREYNEALKLSEDINGMMSERNASGLTGPDAQRRASAIRRKITILGTRLDSL 60

Query: 61  QTQLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLNMSNFANRDSLLGPEIKP--A 120
           Q+ L K+ GKQ + EKEMNRR+DM+ NLRSK NQ+AS LNMSNFANRDSL G ++KP  A
Sbjct: 61  QSLLVKVPGKQHVSEKEMNRRKDMVGNLRSKTNQVASALNMSNFANRDSLFGTDLKPDDA 120

Query: 121 ENRTEGLDNRGLLGFQRQVMR 138
            NR  G+DN+G++ FQRQVMR
Sbjct: 121 INRVSGMDNQGIVVFQRQVMR 141

The following BLAST results are available for this feature:

BLAST of Carg12843 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7024942.1	7.9e-70	100.00	Syntaxin-51 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023535353.1	2.2e-67	100.00	syntaxin-51-like [Cucurbita pepo subsp. pepo]	[more]
XP_022936274.1	2.2e-67	100.00	syntaxin-51-like [Cucurbita moschata]	[more]
XP_022976367.1	6.3e-67	99.27	syntaxin-51-like [Cucurbita maxima]	[more]
KAA0048124.1	4.7e-62	90.34	syntaxin-51-like [Cucumis melo var. makuwa]	[more]

BLAST of Carg12843 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SA23	2.0e-44	67.38	Syntaxin-51 OS=Arabidopsis thaliana OX=3702 GN=SYP51 PE=1 SV=1	[more]
Q94KK7	3.5e-44	67.38	Syntaxin-52 OS=Arabidopsis thaliana OX=3702 GN=SYP52 PE=1 SV=1	[more]

BLAST of Carg12843 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F7U9	1.0e-67	100.00	syntaxin-51-like OS=Cucurbita moschata OX=3662 GN=LOC111442942 PE=4 SV=1	[more]
A0A6J1IFJ4	3.0e-67	99.27	syntaxin-51-like OS=Cucurbita maxima OX=3661 GN=LOC111476792 PE=4 SV=1	[more]
A0A5A7TYL4	2.3e-62	90.34	Syntaxin-51-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold63G0007...	[more]
A0A0A0K2Y5	1.6e-60	90.78	t-SNARE coiled-coil homology domain-containing protein OS=Cucumis sativus OX=365...	[more]
A0A5D3DIH2	6.2e-60	90.07	Syntaxin-51-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G001...	[more]

BLAST of Carg12843 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G16240.1	1.5e-45	67.38	syntaxin of plants 51	[more]
AT1G16240.2	1.5e-45	67.38	syntaxin of plants 51	[more]
AT1G16240.3	1.5e-45	67.38	syntaxin of plants 51	[more]
AT1G79590.1	2.5e-45	67.38	syntaxin of plants 52	[more]
AT1G79590.2	2.5e-45	67.38	syntaxin of plants 52	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR19957:SF297	TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED	coord: 5..137
None	No IPR available	PANTHER	PTHR19957	SYNTAXIN	coord: 5..137

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12843-RA	Carg12843-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0048278	vesicle docking
biological_process	GO:0006906	vesicle fusion
cellular_component	GO:0012505	endomembrane system
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0031201	SNARE complex
molecular_function	GO:0005484	SNAP receptor activity
molecular_function	GO:0000149	SNARE binding